ID:

dwi_19

 Coordinate:

scf2_1100000004585:2278832-2278903 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.7 -32.7 -32.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAAAAAAATTTAAAACCGTTTTCCATTTCATTTTTTGGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAATTATTTCAAAATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTACAATTGCGACACGTGGTGAAGTAGTTCCAATACACAG

***********************************((.(((((..((((.((((((((((((.(((..((((((.......................))))))))).)))))))))))).))))...))))).))************************************* 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 V117

male body		 V118

embryo

 M020

head

 V119

head
...................................................................................................TTTGTTCGTTTGGCTTAAGTT.................................................... 21 0 1 34426.00 34426 17517 8989 3054 4606 260
...................................................................................................TTTGTTCGTTTGGCTTAAGTTA................................................... 22 0 1 32444.00 32444 15070 5984 9576 1650 164
...................................................................................................TTTGTTCGTTTGGCTTAAGT..................................................... 20 0 1 8026.00 8026 2949 3039 488 1501 49
...................................................................................................TTTGTTCGTTTGGCTTAAG...................................................... 19 0 1 2625.00 2625 1134 430 355 681 25
...................................................................................................TTTGTTCGTTTGGCTTAAGTTT................................................... 22 1 1 2079.00 2079 1290 594 100 87 8
..................................................ACTTGGGCCAAGGGAATTCAAACT.................................................................................................. 24 0 1 1860.00 1860 77 62 1597 2 122
....................................................................................................TTGTTCGTTTGGCTTAAGTT.................................................... 20 0 1 1493.00 1493 1438 40 3 11 1
....................................................................................................TTGTTCGTTTGGCTTAAGTTA................................................... 21 0 1 1363.00 1363 1290 44 22 5 2
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.................................................. 23 1 2 856.50 1713 856 275 333 229 20
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.................................................. 23 0 1 314.00 314 172 87 24 29 2
...................................................................................................TTTGTTCGTTTGGCTTAAGTTC................................................... 22 1 1 254.00 254 78 38 10 124 4
....................................................................................................TTGTTCGTTTGGCTTAAGT..................................................... 19 0 1 250.00 250 241 7 1 0 1
.................................................TACTTGGGCCAAGGGAATTCAAACT.................................................................................................. 25 0 1 120.00 120 13 5 89 0 13
....................................................................................................TTGTTCGTTTGGCTTAAGTTT................................................... 21 1 1 116.00 116 113 3 0 0 0
....................................................................................................TTGTTCGTTTGGCTTAAG...................................................... 18 0 1 109.00 109 105 0 0 4 0
..................................................ACTTGGGCCAAGGGAATTCAA..................................................................................................... 21 0 1 100.00 100 7 41 39 0 13
.....................................................................................................TGTTCGTTTGGCTTAAGTTA................................................... 20 0 1 95.00 95 86 7 1 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA................................................. 24 2 2 93.00 186 22 28 28 101 7
...................................................................................................TTTGTTCGTTTGGCTTAAGG..................................................... 20 1 1 93.00 93 2 4 0 87 0
.....................................................................................................TGTTCGTTTGGCTTAAGTT.................................................... 19 0 1 90.00 90 83 5 2 0 0
..................................................ACTTGGGCCAAGGGAATTCAAA.................................................................................................... 22 0 1 87.00 87 3 24 56 0 4
...................................................................................................TTTGTTCGTTTGGCTTAAGA..................................................... 20 1 1 87.00 87 27 17 11 32 0
..................................................ACTTGGGCCAAGGGAATTCA...................................................................................................... 20 0 1 82.00 82 4 44 21 0 13
.................................................TACTTGGGCCAAGGGAATTCA...................................................................................................... 21 0 1 81.00 81 10 59 3 0 9
..................................................ACTTGGGCCAAGGGAATTCAAAC................................................................................................... 23 0 1 61.00 61 9 2 49 0 1
....................................................TTGGGCCAAGGGAATTCAAACTGT................................................................................................ 24 0 1 56.00 56 5 11 39 0 1
...................................................................................................TTTGTTCGTTTGGCTTAAGC..................................................... 20 1 1 52.00 52 3 7 1 41 0
...................................................................................................TTTGTTCGTTTGGCTTAA....................................................... 18 0 1 46.00 46 6 4 24 12 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTTT.................................................. 23 1 1 45.00 45 34 8 1 2 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.................................................. 23 1 1 41.00 41 17 14 7 3 0
...................................................................................................TTTGTTCGTTTGGCTTAAGCT.................................................... 21 1 1 41.00 41 8 25 1 6 1
...................................................................................................TTTGCTCGTTTGGCTTAAGTTA................................................... 22 1 1 41.00 41 10 14 17 0 0
...................................................................................................TTTGTTCTTTTGGCTTAAGTT.................................................... 21 1 1 40.00 40 11 10 3 16 0
...................................................................................................CTTGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 39.00 39 13 10 15 1 0
....................................................................................................TTGTTCGTTTGGCTTAAGTTAA.................................................. 22 1 2 38.00 76 74 1 1 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTG................................................... 22 1 1 38.00 38 21 5 10 1 1
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.................................................. 23 1 1 38.00 38 8 4 4 22 0
...................................................................................................TTTGTTCGTTTGGATTAAGTTA................................................... 22 1 1 37.00 37 4 7 26 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTA.................................................... 21 1 1 35.00 35 25 4 2 4 0
...................................................................................................CTTGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 34.00 34 8 12 5 7 2
.................................................TACTTGGGCCAAGGGAATTCAA..................................................................................................... 22 0 1 31.00 31 5 18 5 0 3
...................................................................................................TTTGTTCGCTTGGCTTAAGTTA................................................... 22 1 1 31.00 31 9 9 12 0 1
...................................................................................................TTTGTTCGTTTGGCTTAAGTC.................................................... 21 1 1 30.00 30 5 5 0 20 0
...................................................................................................TTTGTTCTTTTGGCTTAAGTTA................................................... 22 1 1 29.00 29 10 4 14 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTCC.................................................. 23 2 1 29.00 29 4 2 0 23 0
..................................................................................................CTTTGTTCGTTTGGCTTAAGTTA................................................... 23 1 1 29.00 29 8 9 11 1 0
...................................................................................................TTTGCTCGTTTGGCTTAAGTT.................................................... 21 1 1 28.00 28 7 16 4 1 0
...................................................................................................TTTGTTCGTTTTGCTTAAGTTA................................................... 22 1 1 28.00 28 11 0 17 0 0
...................................................................................................TTTTTTCGTTTGGCTTAAGTT.................................................... 21 1 2 27.00 54 19 6 4 25 0
...................................................................................................TTTGTTCGTTTGGCTTAGGTTA................................................... 22 1 1 26.00 26 5 6 12 1 2
......................................................................................................GTTCGTTTGGCTTAAGTTA................................................... 19 0 1 25.00 25 22 1 2 0 0
...................................................................................................TTTGTTCGTTTCGCTTAAGTTA................................................... 22 1 1 25.00 25 19 1 5 0 0
......................................................................................................TTTCGTTTGGCTTAAGTTA................................................... 19 1 2 24.50 49 8 5 19 17 0
...................................................................................................TTTTTTCGTTTGGCTTAAGTTA................................................... 22 1 2 23.50 47 13 4 12 17 1
....................................................TTGGGCCAAGGGAATTCAAACTG................................................................................................. 23 0 1 23.00 23 3 7 10 1 2
...................................................................................................TTTGTTCGTTTGGCTTAGGTT.................................................... 21 1 1 23.00 23 10 7 3 3 0
...................................................................................................TTTGTTCGTTTGGCCTAAGTTA................................................... 22 1 1 23.00 23 11 2 10 0 0
...................................................................................................TTTGTTCGCTTGGCTTAAGTT.................................................... 21 1 1 23.00 23 10 9 0 4 0
...................................................................................................TTTGTTCGTCTGGCTTAAGTTA................................................... 22 1 1 22.00 22 9 4 8 1 0
....................................................................................................TTGTTCGTTTGGCTTAAGTTAT.................................................. 22 0 1 22.00 22 21 1 0 0 0
...................................................................................................TTTGTTAGTTTGGCTTAAGTTA................................................... 22 1 1 22.00 22 1 0 21 0 0
...................................................................................................TTTGTTCGTTTGACTTAAGTT.................................................... 21 1 1 21.00 21 5 7 2 6 1
...................................................................................................TTTGTTCGTTTGTCTTAAGTT.................................................... 21 1 1 21.00 21 6 1 6 7 1
...................................................................................................TTTGTCCGTTTGGCTTAAGTT.................................................... 21 1 1 21.00 21 8 6 4 3 0
...................................................................................................TTTGTTCGTTCGGCTTAAGTT.................................................... 21 1 1 21.00 21 8 6 2 5 0
...................................................................................................TTTGTTCGTTTGGCTTAATTT.................................................... 21 1 2 20.50 41 19 11 8 2 1
...................................................................................................TTTGTTCGTCTGGCTTAAGTT.................................................... 21 1 1 20.00 20 5 11 1 3 0
...................................................................................................TTTGTTCGTTTAGCTTAAGTTA................................................... 22 1 2 20.00 40 31 1 8 0 0
...................................................................................................TTTGTTCGTTTGTCTTAAGTTA................................................... 22 1 1 20.00 20 2 8 10 0 0
...................................................................................................TCTGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 20.00 20 5 11 3 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGCTA................................................... 22 1 1 19.00 19 5 5 8 0 1
...................................................................................................TTTGTTCGTTTCGCTTAAGTT.................................................... 21 1 1 19.00 19 16 2 1 0 0
....................................................TTGGGCCAAGGGAATTCAAACT.................................................................................................. 22 0 1 18.00 18 6 1 7 1 3
..................................................................................................CTTTGTTCGTTTGGCTTAAGTT.................................................... 22 1 1 18.00 18 13 3 2 0 0
...................................................................................................TTCGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 18.00 18 1 2 14 1 0
...................................................................................................TTTGTTCATTTGGCTTAAGTTA................................................... 22 1 1 18.00 18 1 4 13 0 0
...................................................................................................TCTGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 17.00 17 6 3 8 0 0
...................................................................................................TTTGTTCGTTTGGCTTAATTTA................................................... 22 1 1 17.00 17 12 0 5 0 0
.................................................TACTTGGGCCAAGGGAATTCAAA.................................................................................................... 23 0 1 17.00 17 1 5 7 0 4
...................................................................................................TTTGGTCGTTTGGCTTAAGTT.................................................... 21 1 1 17.00 17 3 8 0 6 0
..................................................ACTTGGGCCAAGGGAATGCAAACT.................................................................................................. 24 1 1 17.00 17 2 0 1 0 14
.....................................................................................................TGTTCGTTTGGCTTAAGT..................................................... 18 0 1 17.00 17 16 1 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAA...................................................... 19 1 2 16.00 32 12 2 7 8 3
...................................................................................................TTTGTTCGTTTGGCTCAAGTTA................................................... 22 1 1 16.00 16 3 4 6 1 2
...................................................................................................TTTGTTCGTTTGACTTAAGTTA................................................... 22 1 1 16.00 16 4 4 5 3 0
...................................................................................................TTTGTTCGTTTGGCCTAAGTT.................................................... 21 1 1 16.00 16 11 3 1 0 1
...................................................................................................TTTGTTCGTTTGGCTTAACTTA................................................... 22 1 1 15.00 15 5 6 4 0 0
......................................................................................................GTTCGTTTGGCTTAAGTT.................................................... 18 0 1 15.00 15 13 0 2 0 0
...................................................................................................TTCGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 15.00 15 4 7 4 0 0
....................................................................................................TTTTTCGTTTGGCTTAAGTT.................................................... 20 1 2 14.50 29 6 4 1 18 0
...................................................................................................TTTGTTCGTTTGCCTTAAGTT.................................................... 21 1 1 14.00 14 2 3 3 6 0
...................................................................................................TTTGTTCGTTTTGCTTAAGTT.................................................... 21 1 2 14.00 28 19 5 4 0 0
.....................................................................................................TTTTCGTTTGGCTTAAGTTA................................................... 20 1 2 13.50 27 5 2 8 12 0
....................................................................................................TTTTTCGTTTGGCTTAAGTTA................................................... 21 1 2 13.50 27 10 3 5 8 1
.....................................................................................................TTTTCGTTTGGCTTAAGTT.................................................... 19 1 2 13.50 27 7 3 2 15 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTATT................................................. 24 0 1 13.00 13 7 0 1 5 0
..................................................ACTTGGGCCAAGGGAATTCAAACTT................................................................................................. 25 1 1 13.00 13 1 1 10 0 1
..................................................ACTTGGGCCAAGGGAATTC....................................................................................................... 19 0 1 13.00 13 1 0 10 1 1
...................................................................................................TTTGTTCGTTTGGATTAAGTT.................................................... 21 1 1 13.00 13 5 1 7 0 0
...................................................................................................TTTGTCCGTTTGGCTTAAGTTA................................................... 22 1 1 13.00 13 2 1 10 0 0
...................................................................................................TTTGTTCGTTCGGCTTAAGTTA................................................... 22 1 1 13.00 13 3 6 4 0 0
...................................................................................................TTTGTTCGTTTAGCTTAAGTT.................................................... 21 1 3 12.67 38 34 2 0 1 1
...................................................................................................TTTGTTCGTTTGCCTTAAGTTA................................................... 22 1 1 12.00 12 1 4 7 0 0
...................................................................................................TTTGTTCGTTTGGCTCAAGTT.................................................... 21 1 1 12.00 12 3 6 2 1 0
.................................................TACTTGGGCCAAGGGAATTCAAAC................................................................................................... 24 0 1 12.00 12 6 0 5 0 1
...................................................................................................TTTGTTCGTTTGGCTTAAGTG.................................................... 21 1 1 11.00 11 3 3 0 4 1
...................................................................................................TTTCTTCGTTTGGCTTAAGTT.................................................... 21 1 2 10.50 21 2 7 2 9 1
...................................................................................................TTTCTTCGTTTGGCTTAAGTTA................................................... 22 1 2 10.50 21 7 3 5 6 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTCA................................................... 22 1 1 10.00 10 3 4 2 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTAA................................................... 22 1 1 10.00 10 7 1 0 2 0
...................................................................................................TTTGTTTGTTTGGCTTAAGTTA................................................... 22 1 1 10.00 10 3 2 5 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGGT.................................................... 21 1 1 10.00 10 3 1 1 5 0
...................................................................................................TTTGTTCGTTTGGCTTCAGTTA................................................... 22 1 1 10.00 10 0 2 8 0 0
...................................................................................................TTTGTTCTTTTGGCTTAAGT..................................................... 20 1 1 10.00 10 1 4 2 3 0
...................................................................................................TTTGTTCGTTTGGCTTTAGTTA................................................... 22 1 1 9.00 9 1 3 5 0 0
...................................................................................................TTTGCTCGTTTGGCTTAAGT..................................................... 20 1 1 9.00 9 1 6 1 1 0
..................................................................................................GTTTGTTCGTTTGGCTTAAGTT.................................................... 22 0 1 9.00 9 9 0 0 0 0
......................................................................................................TTTCGTTTGGCTTAAGTT.................................................... 18 1 5 9.00 45 7 8 2 28 0
...................................................................................................TTTGTTCGTTTGACTTAAGT..................................................... 20 1 1 9.00 9 0 1 1 7 0
...................................................................................................TTTGTTCGTTTGGTTTAAGTTA................................................... 22 1 1 9.00 9 1 4 4 0 0
...................................................................................................TTTGGTCGTTTGGCTTAAGTTA................................................... 22 1 1 9.00 9 1 6 2 0 0
...................................................................................................TTTGTTCGTTTGGCTTACGTTA................................................... 22 1 1 9.00 9 1 3 5 0 0
..................................................................................................TTTTGTTCGTTTGGCTTAAGTT.................................................... 22 1 2 8.50 17 17 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTGAGTT.................................................... 21 1 1 8.00 8 2 5 1 0 0
...................................................................................................TTTGTTCGTTTGGCTAAAGTT.................................................... 21 1 1 8.00 8 4 3 1 0 0
..................................................ACTTTGGCCAAGGGAATTCAAACT.................................................................................................. 24 1 1 8.00 8 0 1 7 0 0
...................................................................................................GTTGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 8.00 8 6 0 0 1 1
..................................................ACTTGGGCCAATGGAATTCAAACT.................................................................................................. 24 1 1 8.00 8 0 0 7 0 1
...................................................CTTGGGCCAAGGGAATTCAAACT.................................................................................................. 23 0 1 8.00 8 7 1 0 0 0
...................................................................................................TTTGTTCGGTTGGCTTAAGTT.................................................... 21 1 1 8.00 8 5 1 0 2 0
.................................................TACTTGGGCCAAGGGAATTC....................................................................................................... 20 0 1 8.00 8 2 6 0 0 0
..................................................................................................GTTTGTTCGTTTGGCTTAAGTTA................................................... 23 0 1 7.00 7 7 0 0 0 0
...................................................................................................TTTGTTGGTTTGGCTTAAGTT.................................................... 21 1 1 7.00 7 4 2 0 1 0
...................................................................................................TTTGTTCGTCTGGCTTAAGT..................................................... 20 1 1 7.00 7 3 3 0 1 0
...................................................................................................TTTGATCGTTTGGCTTAAGTTA................................................... 22 1 1 7.00 7 2 1 4 0 0
.......................................................................................................TTCGTTTGGCTTAAGTTA................................................... 18 0 2 7.00 14 5 4 1 4 0
....................................................................................................TTGTTCGTTTGGCTTAAGTA.................................................... 20 1 1 7.00 7 7 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGGTA................................................... 22 1 1 6.00 6 2 2 2 0 0
...................................................................................................TTTGTTCCTTTGGCTTAAGTTA................................................... 22 1 1 6.00 6 0 3 1 0 2
..................................................ACTTGGGCCAAGGGAATTCAAACTGTGA.............................................................................................. 28 0 1 6.00 6 2 3 0 1 0
...................................................................................................TTTGTTCGTTTGGCTTTAGTT.................................................... 21 1 1 6.00 6 1 3 2 0 0
...................................................................................................TTTGTTCGTTTGGCTTAACTT.................................................... 21 1 1 6.00 6 1 4 1 0 0
...................................................................................................TTAGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 6.00 6 2 2 1 0 1
..................................................................................................TTTTGTTCGTTTGGCTTAAGTTA................................................... 23 1 2 6.00 12 12 0 0 0 0
..................................................................................................ATTTGTTCGTTTGGCTTAAGTT.................................................... 22 1 1 6.00 6 6 0 0 0 0
...................................................................................................TTTGTTCGTTTGGTTTAAGTT.................................................... 21 1 2 5.50 11 3 6 2 0 0
...................................................................................................TTTGTTCGCTTGGCTTAAGT..................................................... 20 1 1 5.00 5 1 4 0 0 0
...................................................................................................TTTGTTGGTTTGGCTTAAGTTA................................................... 22 1 1 5.00 5 1 0 4 0 0
...................................................................................................TTTGTTCGTTTGGCTTGAGTTA................................................... 22 1 1 5.00 5 1 3 1 0 0
..................................................................................................CTTTGTTCGTTTGGCTTAAGT..................................................... 21 1 1 5.00 5 4 1 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAATT.................................................... 21 1 1 5.00 5 2 0 1 1 1
...................................................................................................TTTGTTCGTTTGGCTCAAGT..................................................... 20 1 1 5.00 5 2 3 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTACGTT.................................................... 21 1 1 5.00 5 1 3 1 0 0
...................................................................................................TTTGTTCGTTTGGCTAAAGTTA................................................... 22 1 1 5.00 5 3 0 1 1 0
..................................................ACTTGGGCCAAGGGAATTCAAACC.................................................................................................. 24 1 1 5.00 5 0 1 3 0 1
...................................................................................................TTTGTTCGTTTGGCTTAAC...................................................... 19 1 1 5.00 5 1 0 0 4 0
...................................................................................................TTGGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 5.00 5 5 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCATAAGTT.................................................... 21 1 1 5.00 5 4 0 0 0 1
..................................................ACTTGGGCCAAGGGAGTTCAAACT.................................................................................................. 24 1 1 5.00 5 1 0 3 0 1
....................................................................................................TTGTTCGTTTGGCTTAAGTTC................................................... 21 1 1 5.00 5 5 0 0 0 0
...................................................................................................TTTGTTCATTTGGCTTAAGTT.................................................... 21 1 1 5.00 5 2 0 2 1 0
...................................................................................................TTTTTTCGTTTGGCTTAAGT..................................................... 20 1 2 5.00 10 2 1 1 6 0
..................................................................................................ATTTGTTCGTTTGGCTTAAGTTA................................................... 23 1 1 5.00 5 5 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAATTA................................................... 22 1 1 5.00 5 0 1 4 0 0
..................................................ACTTGGGCCAAGGGAATTCAAACTGTG............................................................................................... 27 0 1 5.00 5 1 4 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTTTT................................................. 24 1 1 5.00 5 2 2 1 0 0
...................................................................................................TTTGTTCGTTTGGCTTCAGTT.................................................... 21 1 2 4.50 9 1 5 3 0 0
..................................................ACTTGGGCCAAGGGAATTCAAACTGT................................................................................................ 26 0 1 4.00 4 0 3 1 0 0
...................................................................................................TTTGTTCGTTTGTCTTAAGT..................................................... 20 1 1 4.00 4 0 2 0 2 0
...................................................................................................TTTGTTCGTTTGGATTAAGT..................................................... 20 1 1 4.00 4 0 1 1 0 2
...................................................................................................TTTGTTCGTTGGGCTTAAGTT.................................................... 21 1 1 4.00 4 4 0 0 0 0
...................................................................................................TTGGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 4.00 4 3 0 1 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.................................................. 23 2 1 4.00 4 2 1 0 1 0
...................................................................................................TTTGTTCGTTTGGCTGAAGTTA................................................... 22 1 1 4.00 4 4 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGCTT................................................... 22 2 1 4.00 4 0 3 0 1 0
...................................................................................................TTTGTTCCTTTGGCTTAAGTT.................................................... 21 1 1 4.00 4 1 3 0 0 0
...................................................................................................TTTGTTCGTATGGCTTAAGTT.................................................... 21 1 1 4.00 4 0 2 2 0 0
...................................................................................................TTTGTTCGATTGGCTTAAGTTA................................................... 22 1 1 4.00 4 1 2 1 0 0
...................................................................................................TTTGTTAGTTTGGCTTAAGTT.................................................... 21 1 1 4.00 4 0 0 4 0 0
...................................................................................................TTTGTTCGTTCGGCTTAAGT..................................................... 20 1 1 4.00 4 1 3 0 0 0
....................................................................................................TTTTTCGTTTGGCTTAAGT..................................................... 19 1 3 4.00 12 2 1 0 9 0
...................................................................................................TTTGATCGTTTGGCTTAAGTT.................................................... 21 1 1 4.00 4 1 2 1 0 0
...................................................................................................TTTGTTCGCTTGGCTTAAG...................................................... 19 1 1 4.00 4 1 0 1 2 0
....................................................................................................TTGTTCGTTTGACTTAAGTT.................................................... 20 1 1 4.00 4 4 0 0 0 0
..................................................ACTTGGGCCAAGGTAATTCAAACT.................................................................................................. 24 1 1 4.00 4 0 0 4 0 0
...................................................................................................ATTGTTCGTTTGGCTTAAGTTA................................................... 22 1 1 4.00 4 2 1 1 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTACA................................................. 24 2 1 4.00 4 0 0 0 4 0
...................................................................................................TTTGTTCGTTTGGCTTATGTTA................................................... 22 1 1 4.00 4 1 0 2 0 1
...................................................................................................CTTGTTCGTTTGGCTTAAGT..................................................... 20 1 1 4.00 4 3 0 1 0 0
..................................................ACTTGGGCCAAGGGAATTAAAACT.................................................................................................. 24 1 1 4.00 4 0 0 2 0 2
...................................................................................................TTTGTTCGTTTAGCTTAAGT..................................................... 20 1 3 3.67 11 7 2 0 2 0
...................................................................................................TTTGTTTGTTTGGCTTAAGTT.................................................... 21 1 3 3.67 11 3 5 3 0 0
...................................................................................................TTTTTTCGTTTGGCTTAAG...................................................... 19 1 3 3.33 10 3 0 1 6 0
..................................................ACTTGTGCCAAGGGAATTCAAACT.................................................................................................. 24 1 1 3.00 3 0 0 3 0 0
..................................................ACTTGGGTCAAGGGAATTCAAACT.................................................................................................. 24 1 1 3.00 3 0 0 3 0 0
...................................................................................................GTTGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 3.00 3 2 1 0 0 0
....................................................................................................TTGCTCGTTTGGCTTAAGTT.................................................... 20 1 1 3.00 3 3 0 0 0 0
...................................................................................................TTAGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 3.00 3 3 0 0 0 0
...................................................................................................TTTGTCCGTTTGGCTTAAGT..................................................... 20 1 1 3.00 3 0 2 1 0 0
..................................................ACTTGGGCCAAGGGAATCCAAACT.................................................................................................. 24 1 1 3.00 3 0 1 2 0 0
..................................................ACTTGGGCCAAGGGACTTCAAACT.................................................................................................. 24 1 1 3.00 3 0 0 3 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTCCC................................................. 24 3 2 3.00 6 0 0 0 6 0
...................................................................................................TTTGTTCGTTTGGCATAAGTTA................................................... 22 1 1 3.00 3 1 1 1 0 0
.....................................................TGGGCCAAGGGAATTCAAACTGTGA.............................................................................................. 25 0 1 3.00 3 0 3 0 0 0
.....................................................................................................TGTTCGTTTGGCTTAAGTTAA.................................................. 21 1 2 3.00 6 6 0 0 0 0
..................................................................................................ATTTGTTCGTTTGGCTTAAGT..................................................... 21 1 1 3.00 3 3 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGAT.................................................... 21 1 1 3.00 3 1 1 0 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAAT................................................. 24 1 1 3.00 3 2 1 0 0 0
...................................................................................................TTTGTTCGTTTGGCTGAAGTT.................................................... 21 1 1 3.00 3 2 0 0 1 0
..................................................ACTTGGGCCAAGTGAATTCAAACT.................................................................................................. 24 1 1 3.00 3 0 0 3 0 0
....................................................................................................TTGTTCGTTTGGCTTAAGTTAG.................................................. 22 1 1 3.00 3 3 0 0 0 0
..................................................ACTTGGGCCAAGGAAATTCAAACT.................................................................................................. 24 1 1 3.00 3 0 1 2 0 0
...................................................................................................TTTGGTCGTTTGGCTTAAGT..................................................... 20 1 1 3.00 3 1 2 0 0 0
...................................................................................................TTTGTTCGTGTGGCTTAAGT..................................................... 20 1 1 3.00 3 0 0 0 3 0
...................................................................................................TTTGTTCGTTTGGGTTAAGTTA................................................... 22 1 1 3.00 3 0 1 2 0 0
..........................................................................GTGAATTATTTCAAAATGCAAAAAG......................................................................... 25 0 1 3.00 3 0 0 3 0 0
...................................................................................................TTTGCTCGTTTGGCTTAAGTTT................................................... 22 2 1 3.00 3 1 0 2 0 0
...................................................................................................TATGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 3.00 3 1 1 0 1 0
...................................................................................................TTTCTTCGTTTGGCTTAAGT..................................................... 20 1 2 2.50 5 0 4 0 0 1
..................................................................................................TTTTGTTCGTTTGGCTTAAGT..................................................... 21 1 2 2.00 4 4 0 0 0 0
...................................................................................................TTTGTTGTTTTGGCTTAAGTTA................................................... 22 2 1 2.00 2 2 0 0 0 0
..................................................ACTTGGGCCAAGGGAATTCAGACT.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0
...................................................................................................TTTGTTCGTTGGGCTTAAGT..................................................... 20 1 1 2.00 2 1 1 0 0 0
..................................................ACTTGGGCCAAGGGAATTCAAATT.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0
...................................................................................................TTTGTTCGTTCGGCTTAAG...................................................... 19 1 1 2.00 2 0 1 0 1 0
...................................................................................................TTTGTTCGTTTGCCTTAAGT..................................................... 20 1 1 2.00 2 2 0 0 0 0
..................................................ACTTGGGCCAAGGGAATTCGAACT.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0
....................................................................................................TTGTTCGTTTGACTTAAGTTA................................................... 21 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGTGTGGCTTAAGTT.................................................... 21 1 1 2.00 2 0 2 0 0 0
..................................................ACTTGGGCCAAGGGAATTCAACCT.................................................................................................. 24 1 1 2.00 2 0 1 0 0 1
...................................................................................................TTTGTTCGTGTGGCTTAAGTTA................................................... 22 1 1 2.00 2 2 0 0 0 0
...................................................................................................TCTGTTCGTTTGGCTTAAGT..................................................... 20 1 1 2.00 2 1 1 0 0 0
...................................................................................................TTTGTTCGTTTGGCCTAAGT..................................................... 20 1 1 2.00 2 1 1 0 0 0
..................................................ACTTGGGCCAAGGGAATTCAAGCT.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0
...................................................................................................TTTGTTCGTTTGGCTTACGT..................................................... 20 1 1 2.00 2 0 1 1 0 0
.....................................................................................................TGTTCGTTTGGGTTAAGTTA................................................... 20 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGGTTGGCTTAAGT..................................................... 20 1 1 2.00 2 0 0 0 2 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTGT.................................................. 23 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTATA................................................. 24 1 1 2.00 2 2 0 0 0 0
....................................................................................................TTGTTCGTTTGCCTTAAGTTA................................................... 21 1 1 2.00 2 2 0 0 0 0
..................................................ACTTGGGCCAAGGGAATTCAAACA.................................................................................................. 24 1 1 2.00 2 0 1 1 0 0
...................................................................................................TTTGTACGTTTGGCTTAAGT..................................................... 20 1 1 2.00 2 0 2 0 0 0
.................................................................................................AGTTTGTTCGTTTGGCTTAAGTTA................................................... 24 0 1 2.00 2 1 0 1 0 0
....................................................................................................TTGGTCGTTTGGCTTAAGTTA................................................... 21 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCCTAAGTTT................................................... 22 2 1 2.00 2 0 2 0 0 0
...................................................................................................TTTGTTCGTTTGGCTCAAGTTT................................................... 22 2 1 2.00 2 0 1 0 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTCT.................................................. 23 1 1 2.00 2 0 0 0 2 0
...................................................................................................TTTGTTCGTTTGCCTTAAG...................................................... 19 1 1 2.00 2 0 0 0 2 0
....................................................................................................TTGCTCGTTTGGCTTAAGTTA................................................... 21 1 1 2.00 2 2 0 0 0 0
.....................................................................................................TTTTCGTTTGGCTTAAGT..................................................... 18 1 4 2.00 8 2 0 0 6 0
.....................................................................................................TGTTCGTTTGGCTTAAGTTAT.................................................. 21 0 1 2.00 2 2 0 0 0 0
.................................................TACTCGGGCCAAGGGAATTCAAACT.................................................................................................. 25 1 1 2.00 2 0 0 2 0 0
...................................................................................................ATTGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAT...................................................... 19 1 2 2.00 4 4 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGATA................................................... 22 1 1 2.00 2 1 0 1 0 0
....................................................................................................TTGTTCGTTTGGCTTAACTTA................................................... 21 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCATAAGT..................................................... 20 1 1 2.00 2 1 0 1 0 0
...................................................................................................TTTGTTCGTTTGGCGTAAGTT.................................................... 21 1 1 2.00 2 2 0 0 0 0
..................................................ACCTGGGCCAAGGGAATTCAAACT.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0
..................................................ACTTGGTCCAAGGGAATTCAAACT.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0
................................................................................................AGTTTTGTTCGTTTGGCTTAAGTT.................................................... 24 2 1 2.00 2 2 0 0 0 0
.................................................TACTTGGGCCAAGGGAATTCAAACTT................................................................................................. 26 1 1 2.00 2 1 0 1 0 0
....................................................................................................TTGTTCGTTTGGCTTAATTT.................................................... 20 1 2 2.00 4 4 0 0 0 0
...................................................................................................TTTGTACGTTTGGCTTAAGTTA................................................... 22 1 1 2.00 2 1 1 0 0 0
.....................................................................................................TGTTCGTTTGGCTTAAGTTT................................................... 20 1 1 2.00 2 2 0 0 0 0
....................................................TTGGGCCAAGGGAATTCAA..................................................................................................... 19 0 1 2.00 2 1 1 0 0 0
....................................................................................................TTGTTCGTTTGGCTCAAGTTA................................................... 21 1 1 2.00 2 1 1 0 0 0
..................................................................................................GTTTGTTCGTTTGGCTTAAGT..................................................... 21 0 1 2.00 2 2 0 0 0 0
..................................................TCTTGGGCCAAGGGAATTCAAACT.................................................................................................. 24 1 1 2.00 2 0 0 1 0 1
...................................................................................................TTTGTTCGTTTGGGTTAAGTT.................................................... 21 1 1 2.00 2 0 2 0 0 0
..................................................ACTTGGGCCAAGGGAATTCAAAA................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
....................................................................................................TTGTTCGTTTGGCTTAATTTA................................................... 21 1 1 2.00 2 2 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGGTT................................................... 22 2 1 2.00 2 0 1 1 0 0
...................................................................................................TTTGTTCGTTAGGCTTAAGTTA................................................... 22 1 2 2.00 4 1 2 1 0 0
...................................................................................................TGTGTTCGTTTGGCTTAAGTT.................................................... 21 1 1 2.00 2 0 2 0 0 0
...................................................................................................TTTGTTCGTTTCGCTTAAGT..................................................... 20 1 2 2.00 4 4 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAGGT..................................................... 20 1 2 2.00 4 1 2 0 1 0
...................................................................................................TTTGTTCGTTCGGCTTAAGTTT................................................... 22 2 1 2.00 2 1 0 1 0 0
...................................................................................................TTTGGTCGTTTGGCTTAAGTTC................................................... 22 2 1 2.00 2 0 1 0 1 0
...................................................................................................TTTGTACGTTTGGCTTAAGTT.................................................... 21 1 1 2.00 2 0 1 0 1 0
...................................................................................................TTTGTTCGTTTTGCTTAAGT..................................................... 20 1 4 1.75 7 2 2 1 1 1
...................................................................................................TTTGTTCGTTTGGCTTTA....................................................... 18 1 7 1.71 12 2 3 7 0 0
...................................................................................................TTTGTTCGTTTCGCTTAAG...................................................... 19 1 2 1.50 3 3 0 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTCAGT..................................................... 20 1 2 1.50 3 0 3 0 0 0
...................................................................................................TTTGCTCGTTTGGCTTAAG...................................................... 19 1 2 1.50 3 2 1 0 0 0
...................................................................................................TTTGTTTGTTTGGCTTAAGTTAA.................................................. 23 2 2 1.50 3 1 0 2 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.................................................. 23 2 2 1.50 3 3 0 0 0 0
...................................................................................................TTTGTTCGTTAGGCTTAAGT..................................................... 20 1 2 1.50 3 2 1 0 0 0
....................................................................................................TTCTTCGTTTGGCTTAAGTTA................................................... 21 1 2 1.50 3 0 0 2 1 0
...................................................................................................TTTGTTCGTTTGCCTTAAGTTAA.................................................. 23 2 2 1.50 3 1 2 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAATTTAA.................................................. 23 2 2 1.50 3 1 0 1 0 1
....................................................................................................TTGTTCGTTTGGCTTAAGTTAAA................................................. 23 2 2 1.50 3 2 0 0 0 1
...................................................................................................TTTGCTCGTTTGGCTTAAGTTAA.................................................. 23 2 2 1.50 3 2 0 0 1 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTTCC................................................. 24 3 2 1.50 3 0 0 0 3 0
...................................................................................................TCTGTTCGTTTGGCTTAAGTTT................................................... 22 2 3 1.33 4 2 2 0 0 0
...................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC................................................. 24 2 3 1.33 4 1 0 1 2 0
....................................................................................................TCTTTCGTTTGGCTTAAGTTA................................................... 21 2 4 1.25 5 0 2 2 1 0
...................................................................................................TTTTTTCGTTTGGCTTAAGTTT................................................... 22 2 4 1.25 5 4 1 0 0 0
....................................................................................................TTGTTAGTTTGGCTTAAGTT.................................................... 20 1 1 1.00 1 1 0 0 0 0
....................................................................................................CTGTTCGTTTGGCTTAAGTT.................................................... 20 1 1 1.00 1 1 0 0 0 0
...........................................................................................GCAAAAAGTTTGTTCGTTTGGCTTA........................................................ 25 0 1 1.00 1 0 1 0 0 0

Anti-sense strand reads

TTTTTTTTAAATTTTGGCAAAAGGTAAAGTAAAAAACCCCCGTCGCTTAATGAACCCGGTTCCCTTAAGTTTGACACTTAATAAAGTTTTACGTTTTTCAAACAAGCAAACCGAATTCAATAAAAGTACAGGCATGTTAACGCTGTGCACCACTTCATCAAGGTTATGTGTC

*************************************((.(((((..((((.((((((((((((.(((..((((((.......................))))))))).)))))))))))).))))...))))).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total V118

embryo

 M045

female body
...............GGCAACAGGTGAAGTAAAACA........................................................................................................................................ 21 3 11 0.09 1 1 0
..............................................................................AAAAAAAGTTTTACGTTTTGCA........................................................................ 22 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004585:2278782-2278953 - dwi_19 confident AA-AAAA--AATTTAAA-ACCG-----TTTTCCATTTCATT-------------------------TTTTGGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAA----TT---ATTTCAAAATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTACA---------ATTGCGACACGTGG-TGAAG--TAGTTCCAATACACAG
droVir3 scaffold_12963:19405388-19405511 + dvi-mir-375 Known_mirbase T-------CCATTC-----------------------------------------------AA----AGTTCGGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTCAA----CGCA---------TTGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCAAC-----------ATAACGCCACGTGG-TGGAG------------------
droMoj3 scaffold_6500:23808220-23808360 - dmo_4 confident GG-C------A----------------TTTTCCTGTTCAGTGTA------------------TGCTCCTGCAGGGCTGCGAATTACTTGGGCCAAGGGAATGCAAACTGTTCGAAA-AGCA---------TTGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------AAAACGCCACGTGG-TG---------------------
droGri2 scaffold_15252:7270320-7270456 + dgr_76 confident AT-T--T--G-------------------------------------------------------GTGGGGCGGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTGAA--AGCGCATTTTGCATATAACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------ATAACGCCACGTGGGTGAAG--CAG-------------
dp5 4_group3:5649078-5649227 + dps-mir-375 Known_mirbase AT-C---------C-------AAGGCCTGTGCCTG-----TGTCTGAGAGCCCACCCACCCGAAT------AGGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTGAT----CGCA---------ATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAAG----------TAAACGCCACGTGG------------------------
droPer2 scaffold_1:7140223-7140385 + dpe_13 confident AG-AGAT--GCACTGCA-TCCAAGGCCTGTGCCTG-----TGCTTGAGAGCCCACCCACCCGAAT------AAGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTGAT----CGCA---------ATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAAG----------TAAACGCCACGTGG------------------------
droAna3 scaffold_12916:2746992-2747125 + dan_11 confident AA-A--AGACAC------------------------------------------CCCACGGAAACG----AGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAT----CGCA---------ATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTTG----------CAAACGCCACGTGG-TGGAG------------------
droBip1 scf7180000396737:2017548-2017698 - AA-AGTT--GGTGGAGCTCC-C------------------------AGAGACACCCCACGGAAACG----AGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CGCA---------ATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTTG----------CAAACGCCACGTGG-TGGAG------------------
droKik1 scf7180000301725:150200-150336 - AG-AGAT--ACTTTA--------------------------------------------------CTCTTCGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CGCAA--------TTACCAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAAAAACACACAGACAAACGCCACGTGG-T----------------------
droFic1 scf7180000453904:1127920-1128043 + TG-G--AACCACCA---------------------------------------------------GATCCCCGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTGAT----CGCA-----------GCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGATT----------TAAGCGCCACGTGG-TG---------------------
droEle1 scf7180000490458:433888-434005 - AA-AAAA----------------------------------------------------------------GGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTAAT----TGCA---------ATGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGATT----------TAAACGCCACGTGG-TGGAG------------------
droRho1 scf7180000769144:95330-95478 - CA-ACGAACTATCA---------------------------------------------------GTATCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTTTT----CGCA---------CTGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGATT----------TAAACGCCACGTGG-TGGAGATCGGTTCGGTTCTATAT
droBia1 scf7180000302261:2955884-2956009 - CTCG-CAGACGGCG---------------------------------------------------GAGTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CC--------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGATT----------AAAGCGCCACGTGG-TGGAG------------------
droTak1 scf7180000415856:522988-523094 + GA-G--T--GGTTTAA------------------------A--------------------GTATCCCTTTGGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTGAT----CG--------------CTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG---------------------------------------------------
droEug1 scf7180000409554:1584263-1584386 + GT-G-G-ACTATCA---------------------------------------------------CTATCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CG--------------TTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGATT----------AAATCGCCACGTGG-TGGAG------------------
dm3 chr2L:857521-857651 + dme-mir-375 Known_mirbase TG-G--AGCCATCCG----------------------------------------------AAACCCCTTCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TGGAG------------------
droSim2 2l:820308-820435 + dsi-mir-375 Known_mirbase G-----AGCCATCC-----------------------------------------------GAATCCCTACCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TAGAG------------------
droSec2 scaffold_14:828154-828284 + dse_12 confident CT-G-GAGCCATCC-----------------------------------------------GAATCCCTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TAGAG------------------
droYak3 2L:841549-841674 + dya_17 confident CATG-GAGCCATCC---------------------------------------------------GAGTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----GC--------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TGGAG------------------
droEre2 scaffold_4929:914691-914815 + der_8 confident TT-G-GAGCCACCA---------------------------------------------------CCATCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----GC--------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTCG-AGGAG------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AA-AAAA--AATTTAAA-ACCG-----TTTTCCATTTCATT-------------------------TTTTGGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAA----TT---ATTTCAAAATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTACA---------ATTGCGACACGTGG-TGAAG--TAGTTCCAATACACAGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21134426.003442646061751789893054260
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22132444.003244416501507059849576164
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2018026.00802615012949303948849
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1912625.002625681113443035525
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2212079.0020798712905941008
....................................................................................ACTTGGGCCAAGGGAATTCAAACT.....................................................................................................................2411860.001860277621597122
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2011493.0014931114384031
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111363.0013635129044222
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................232856.50171322985627533320
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231314.003142917287242
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................221254.002541247838104
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191250.002500241711
...................................................................................TACTTGGGCCAAGGGAATTCAAACT.....................................................................................................................251120.0012001358913
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211116.001160113300
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................181109.001094105000
....................................................................................ACTTGGGCCAAGGGAATTCAA........................................................................................................................211100.0010007413913
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20195.0095186710
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................24293.001861012228287
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................20193.0093872400
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19190.0090083520
....................................................................................ACTTGGGCCAAGGGAATTCAAA.......................................................................................................................22187.00870324564
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20187.0087322717110
....................................................................................ACTTGGGCCAAGGGAATTCA.........................................................................................................................20182.008204442113
...................................................................................TACTTGGGCCAAGGGAATTCA.........................................................................................................................21181.00810105939
....................................................................................ACTTGGGCCAAGGGAATTCAAAC......................................................................................................................23161.0061092491
......................................................................................TTGGGCCAAGGGAATTCAAACTGT...................................................................................................................24156.00560511391
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................20152.0052413710
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18146.00461264240
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23141.00413171470
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22238.0076074110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22138.00381215101
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23138.0038228440
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21135.0035425420
...................................................................................TACTTGGGCCAAGGGAATTCAA........................................................................................................................22131.0031051853
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................21130.0030205500
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCC..............................................................23129.0029234200
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19125.0025022120
......................................................................................TTGGGCCAAGGGAATTCAAACTG....................................................................................................................23123.0023137102
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22122.0022021100
......................................................................................TTGGGCCAAGGGAATTCAAACT.....................................................................................................................22118.001816173
...................................................................................TACTTGGGCCAAGGGAATTCAAA.......................................................................................................................23117.001701574
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................18117.0017016100
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................19216.0032812273
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18115.0015013020
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24113.001357010
....................................................................................ACTTGGGCCAAGGGAATTCAAACTT....................................................................................................................25113.0013011101
....................................................................................ACTTGGGCCAAGGGAATTC..........................................................................................................................19113.0013110101
...................................................................................TACTTGGGCCAAGGGAATTCAAAC......................................................................................................................24112.001206051
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................21111.001143301
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................2219.00909000
.....................................................................................CTTGGGCCAAGGGAATTCAAACT.....................................................................................................................2318.00807100
...................................................................................TACTTGGGCCAAGGGAATTC..........................................................................................................................2018.00802600
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................2317.00707000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1827.001445410
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTA................................................................2017.00707000
....................................................................................ACTTGGGCCAAGGGAATTCAAACTGTGA.................................................................................................................2816.00612300
....................................................................................ACTTGGGCCAAGGGAATTCAAACC.....................................................................................................................2415.00500131
............................................................................................................................................TTTGTTCGTTTGGCTTAAC..................................................................1915.00541000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTC...............................................................2115.00505000
....................................................................................ACTTGGGCCAAGGGAATTCAAACTGTG..................................................................................................................2715.00501400
....................................................................................ACTTGGGCCAAGGGAATTCAAACTGT...................................................................................................................2614.00400310
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................2314.00412100
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA.............................................................2414.00440000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCCC.............................................................2423.00660000
.......................................................................................TGGGCCAAGGGAATTCAAACTGTGA.................................................................................................................2513.00300300
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................2123.00606000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAG..............................................................2213.00303000
............................................................................................................GTGAA----TT---ATTTCAAAATGCAAAAAG.....................................................................................2513.00300030
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATA.............................................................2412.00202000
....................................................................................ACTTGGGCCAAGGGAATTCAAACA.....................................................................................................................2412.00200110
..........................................................................................................................................AGTTTGTTCGTTTGGCTTAAGTTA...............................................................2412.00201010
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAT..............................................................2112.00202000
............................................................................................................................................TTTGTTCGTTTGGCTTAAT..................................................................1922.00404000
...................................................................................TACTTGGGCCAAGGGAATTCAAACTT....................................................................................................................2612.00201010
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................2012.00202000
......................................................................................TTGGGCCAAGGGAATTCAA........................................................................................................................1912.00201100
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGT.................................................................2112.00202000
....................................................................................ACTTGGGCCAAGGGAATTCAAAA......................................................................................................................2312.00200200
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................2321.50303000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2321.50302001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTCC.............................................................2421.50330000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................2431.33421010
....................................................................................................................................GCAAAAAGTTTGTTCGTTTGGCTTA....................................................................2511.00100100
droVir3
T-------CCATTC-----------------------------------------------AA----AGTTCGGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTCAA----CGCA---------TTGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCAAC-----------ATAACGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................211172012.00172012511679020846274667192005311874535291200019602161625152214028132334986201611143208678623223608941927269391751400249148310100000003795121328420328115012532611648011604434112645332944381154505550
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................221137312.0013731219593271406217013571312620686503000153416404951062799484143543014065629237592108402443612317341952319415008198150003000021914202616202481561042002321756635058754723504239242623192238354244
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................20128030.002803021272423162382930502113843504000260328872042231213461503243392291862734781439349011816300062358000000000113322604867284555265100151224292616221819218151114
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22115278.0015278926206464443114111113000061136337786813002230433216962128061520008184500000000000000032521169202200011498300101
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................19112205.00122051736230153137111007583168100011514730787051136711724234161326917146271576065620006667000000000010110149162163660500135028252127202115235
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2319670.0096703126410244245142220531002110114306536437024126242646472048627204501752000448500000000000000055731328839046152312323507143
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2219175.00917519646308110045661340621000831145777524769431325401011204115022375603540000140000000000001010213171535301166018300001620002421
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2413903.003903160161288134303631023320007724133020298427730012115521080237074002006402000218131730421421148914748424380004219000000142011713346
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2012212.00221211017805041040120000742431749000001382268801900000420000000000000001011004300000000010000001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................2311863.0018636713446210540221100001825710138157280000159317762680581000051000000000000102883251123604100000100001110
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111770.001770521228402502060000610387123310001351166414901300000390000000000001000000103000000010002200000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................2111498.001498209864160234413050000010002891110000141502592058000002030000000000000001110015100000031410000010
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................1811380.0013803431000270150300001615259186184020122533292105150260000011000000000000000000040000000012000100000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241873.00873170274021330903300006705241311301000471143590019000004301000000001000000121011800010187413301122
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................201416.0041613724771019020700001112003220001029580500000130000000000000000010006900010082413301010
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................211380.0038020830180212551000691513154200020154821480190000080000000000000000000315800000000000000010
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................231329.00329102116017025218000054162015110000015371345050000050000000000300001005104200000100000017733
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211282.00282102650000001000030000000000000051201000000000000000000000000000300000000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191267.00267402271010000000010101020000000137803000001000000000000000000100500000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................211256.0025691461123010700003512148130000192992601500000110000000000000000000003700010000000001000
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................201246.0024610210070271490000200002513000016221126070000040000000000000000000404600000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................231244.00244702120170309000011022260800000829184001200000190000000000001000000103202000000000100000
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................221227.0022700101012014133000015021322310000142313190110000070000000000000001010104500000000000000001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................201219.002191852230030000000000000000100000010001000000000000000000000000000300000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................221215.00215303610280201000000201009020000082083201000000200000000000000000010112000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................231180.001801611830130200000002011241100000103172501000000110000000000000000000201800000000001000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC.............................................................241177.0017714111011100000000010000300000008639230200000180000000000000000000001100000000100000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................181153.00153201350000001000001000010000010131301000001000000000000000000000100000000000000001
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................221136.00136418800801000000011000001000000841400000001000000000000000000000400000000000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................191133.00133008210702000000000001200000002721203000006000000000000000210000300000000000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................201125.00125006300300000000310000111000004982300000002000000000000000200000200110000000000000
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................191108.001080053070250250000100020220000001303060000020000000000000000000501600000000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTC...............................................................211104.0010420611050000000000000010000000182903000009000000000000000000000200000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT...............................................................22197.009728315001300000000010000400100001603020000010000000000000000100000900000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................19286.50173304281120010400000701300240000001359016000009000000000000000000002900000000010100020
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18175.00750015101000010000113010202000100113409000009000000000000000000000100000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATCC............................................................25169.0069170100600000000000000200000003837010000070000000000000000000001300000010000000000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19165.0065001510100000000110201601000005105502000006000000000000000000000102000000000000000
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................22158.00584041020605000003020000000000101602000000000000000100213200210400000000000001301
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCC..............................................................23256.00112690400400000000000000500000000602030000060000000000000000000001200000000000000001
....................................................................................ACTTGGGCCAAGGGAATGCAAACC.....................................................................................................................24156.005610054000100000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................20354.671647574420800000000000000102000000225010000050000000000000000000001000000000000000000
.....................................................................................CTTGGGCCAAGGGAATGCAAACT.....................................................................................................................23149.004900147000101000000000020000000211002000000000000010100101010320100000000000003400
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................25148.004800910203070000200000001000000102030000000000000000000001001001500000000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22141.004100320000000000000000000000000061000000001000000000000000000000100000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA..............................................................23238.0076501010900000000200001200000002154704000009000000000000000000000500000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGAA................................................................21137.003715110000102000011100020000000110002000001000000000000000000000600000000010000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCC...............................................................22236.507339051090000000001000050000000010301000004000000000000000000000400000000000000000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................18133.00335150030000000002000010000000022604000000000000000000000100000100000000000000000
....................................................................................ACTTGGGCCAAGGGAATG...........................................................................................................................18123.002300100006010000000000000000000020001000000000000000000000000000300000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................21223.00469033010500000004000050000000161201000002000000000000000000001200000000000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................18121.002100140010001000000000000000000011001000001000000000000000000000100000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................23220.504120610700000000000000000000001104201000004000000000000000000000300000000000000000
...................................................................................TACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................25120.00200020000401000010010010100000130300000000000000000000000000000000000000000001001
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................21117.00170080000000000000000000000000011500000001000000000000000000000100000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24117.00172142000000000000000000000000022200000001000000000000000000000100000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCCC.............................................................24217.003426010020000000000000010000000020000000000000000000000000000000200000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAT..................................................................19216.00329010020000000000010121220000000007000001000000000000000000010200000000000000000
..........................................................................................GCCAAGGGAATGCAAACT.....................................................................................................................18116.00160000000808000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GTCAA----CGCA---------TTGCAATAAG.....................................................................................19115.00151021000000000010000000000000122300000002000000000000000000000000000000000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................20113.001300110000000000000000000000000011000000000000000000000000000000000000000000000000
...................................................................................TACTTGGGCCAAGGGAATGCA.........................................................................................................................21113.00130000000401000000000000000000020200000001000000000000000000000300000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACC.............................................................24112.00125000010000000000000000000000011002000000000000000000000000000200000000000000000
...................................................................................TACTTGGGCCAAGGGAATGCAA........................................................................................................................22112.00120000000004000010000010000000000200000000000000000000000000000400000000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACTGTCAA----CGCA---------TTGCAATAAG.....................................................................................43112.00120000000000000000000000000000000000000000000000000202001105100000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG.............................................................24111.00110130000000000000000000000000110100000001000000000000000000000100000000020000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTCC.............................................................24211.002210010030000000000000000000000030000000002000000000000000000000300000000000000000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................22111.001100100000000000000000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................23211.00221090010000000010000020000000220200000000000000000000000000000200000000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................21111.00110020000300000001000000000000010000000000000000000000000000000400000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTAT...............................................................22111.00112040000001000000000000000000010000000000000000000000000000000300000000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAAAA......................................................................................................................23111.00110010000401000000000020000000000100000000000000000000000000000100000000000000100
............................................................................................................................................TTTGTTCGTTTGGCTTAAC..................................................................19210.502116201010000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................23110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................24210.00203120010000000000000000000000120301000003000000000000000000000200000000000001000
.....................................................................................CTTGGGCCAAGGGAATGCAAAC......................................................................................................................2218.0080030010000000000000000000000100100000000000000000000000000000200000000000000000
......................................................................................TTGGGCCAAGGGAATGCAAAC......................................................................................................................2118.0080010000100000001000000000000002000000000000000000000000111000000000000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACA.....................................................................................................................2418.0080010010001000000000000000000000100000000000000000000000000000400000000000000000
droMoj3
GG-C------A----------------TTTTCCTGTTCAGTGTA------------------TGCTCCTGCAGGGCTGCGAATTACTTGGGCCAAGGGAATGCAAACTGTTCGAAA-AGCA---------TTGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------AAAACGCCACGTGG-TG---------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22173006.007300639999484681441751014801
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21165268.00652684100284134232614617670
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2017529.0075293392423513243735
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2216009.006009377629162631943
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2113443.00344333362125151
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2013378.00337833130001748
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2312881.0028811488187201321216
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2412839.00283992328221937478
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1911578.001578686181417852
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231968.00968452331169340
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................221664.006645112475531
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................211623.0062325002275321
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211337.0033733300004
....................................................................................ACTTGGGCCAAGGGAATGCAAACC.....................................................................................................................241296.0029600002960
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191253.0025324400027
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................231229.0022919110016534
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................201158.00158145000121
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241149.00149303011798
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................191147.0014714100132
......................................................................................TTGGGCCAAGGGAATGCAAACTGT...................................................................................................................241146.001461230019112
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................221127.0012711900008
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................21196.009616201374
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................20178.007820005026
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22169.006942000819
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21169.006944000520
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................22166.006694101042
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT...............................................................22160.00601000059
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................20158.005814100043
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18156.00565500001
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22153.00535300000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23150.0050131011718
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................22141.00418000825
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................23140.00401000138
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19140.00403700003
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23135.00352600027
......................................................................................TTGGGCCAAGGGAATGCAAACTG....................................................................................................................23133.00336200025
............................................................................................................GTTCGAAA-AGCA---------TTGCAAAAAG.....................................................................................22132.003225011113
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................19129.00293001322
......................................................................................TTGGGCCAAGGGAATGCAA........................................................................................................................19127.00273010023
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18124.00242000013
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................23121.00211900002
.....................................................................................CTTGGGCCAAGGGAATGCAAACT.....................................................................................................................23120.00201410023
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................25119.00190000316
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24119.00195000311
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20218.503715000121
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18118.0018800019
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................20116.00161600000
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................18114.00141400000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................18112.0012700023
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC.............................................................24111.00110000011
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................21110.0010900100
...................................................................................TACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2519.009120033
......................................................................................TTGGGCCAAGGGAATGCAAACTGC...................................................................................................................2418.008000080
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................2218.008800000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTC...............................................................2118.008700001
......................................................................................TTGGGCCAAGGGAATGCAAA.......................................................................................................................2018.008100007
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................2327.5015600027
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG..............................................................2317.007700000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................2117.007200104
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................2417.007300022
....................................................................................ACTTGGGCCAAGGGAATGT..........................................................................................................................1916.006200004
......................................................................................TTGGGCCAAGGGAATGCAAACTGTT..................................................................................................................2516.006000006
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTG...............................................................2116.006600000
....................................................................................ACTTGGGCCAAGGGAATGCAAACA.....................................................................................................................2415.005100013
......................................................................................TTGGGCCAAGGGAATGCAAAC......................................................................................................................2115.005200021
...............................................................................................................................................GTTCGTTTGGCTTAAGTTAA..............................................................2014.004400000
....................................................................................ACTTGGGCCAAGGGAATGCAAACTA....................................................................................................................2514.004010021
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG..............................................................2314.004400000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGGC.............................................................2414.004400000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2314.004400000
...................................................................................TACTTGGGCCAAGGGAATGCAA........................................................................................................................2214.004000004
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................1933.6711700004
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTC................................................................2013.003000021
....................................................................................ACTTGGGCCAAGGGAATGCT.........................................................................................................................2013.003100002
....................................................................................ACTTGGGCCAAGGGAATGTT.........................................................................................................................2013.003000003
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAT..............................................................2113.003200010
droGri2
AT-T--T--G-------------------------------------------------------GTGGGGCGGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTGAA--AGCGCATTTTGCATATAACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------ATAACGCCACGTGGGTGAAG--CAG-------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................2113447.00344724161031
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................2212548.0025481862686
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................201376.00376194182
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................221338.00338213125
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................201198.001981926
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................211187.0018717512
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................231148.001487474
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................23168.00685018
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................19163.00634023
....................................................................................ACTTGGGCCAAGTGGATGTAAACT.....................................................................................................................24154.00544212
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................21117.0017170
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................19115.0015141
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19114.0014131
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20111.0011110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................2419.00954
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................2318.00853
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................1817.00770
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................2216.00660
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................2216.00660
....................................................................................ACTTGGGCCAAGTGGATGTAAAC......................................................................................................................2316.00660
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................2114.00422
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................2214.00440
....................................................................................ACTTGGGCCAAGTGGATGTAA........................................................................................................................2114.00413
....................................................................................ACTTGGGCCAAGTGGATGTA.........................................................................................................................2014.00440
....................................................................................ACTTGGGCCAAGTGGATGTAAA.......................................................................................................................2214.00404
.....................................................................................CTTGGGCCAAGTGGATGTAAACT.....................................................................................................................2313.00321
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................1813.00330
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................1812.00211
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAT..............................................................2112.00220
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................2212.00220
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................1812.00220
....................................................................................ACTTGGGCCAAGTGGATGTAAACTT....................................................................................................................2512.00211
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTAA..............................................................2411.00110
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................1911.00101
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................2111.00110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................2111.00110
........................................................................................GGGCCAAGTGGATGTAAACT.....................................................................................................................2011.00110
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1811.00110
......................................................................................TTGGGCCAAGTGGATGTAAACTG....................................................................................................................2311.00110
.....................................................................................CTTGGGCCAAGTGGATGTAAA.......................................................................................................................2111.00110
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................2011.00110
....................................................................................ACTTGGGCCAAGTGGATGT..........................................................................................................................1911.00101
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................1911.00110
........................................................................................GGGCCAAGTGGATGTAAACTT....................................................................................................................2111.00110
..........................................................................................GCCAAGTGGATGTAAACT.....................................................................................................................1811.00101
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG..............................................................2311.00110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAC............................................................2511.00110
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTATTTTC..........................................................2611.00110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA..............................................................2311.00101
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................2011.00101
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................2311.00110
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................2311.00110
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2320.50110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................................2520.50101
............................................................................................................................................TTTGTTCGTTTGGCTTAT...................................................................1830.33110
dp5
AT-C---------C-------AAGGCCTGTGCCTG-----TGTCTGAGAGCCCACCCACCCGAAT------AGGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTGAT----CGCA---------ATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAAG----------TAAACGCCACGTGG------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21157169.00571691115297741509410243544648340160331018
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22153373.00533732791601528401887804623652132271481877
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2217422.00742267380516544374389912254107
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2015909.0059092473395963820689531102764
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2012701.002701425811203360677
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2312674.00267448803262222328414139062
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1912096.002096137943881230147078229
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111669.0016690145271362201699
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................2311091.0010911521620128116368624
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211339.00339032701005051
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191308.00308029610008021
....................................................................................ACTTGGGCCAGGGGAATTCAAACT.....................................................................................................................241227.002270411072300003512
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................221162.0016256834305230240
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................211158.001583712024002011
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................191142.00142113200001071
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241136.0013623334012210475
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................211100.001002610010190161
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22192.0092076000030112
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20189.008907700102090
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20186.008610354010100260
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18174.007407300000010
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23168.0068418301140343
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24165.006525100250500
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22151.0051027400250130
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................23135.0035018000030140
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22130.003011900000091
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18130.003017000010201
....................................................................................ACTTGGGCCAGGGGAATTCAAAC......................................................................................................................23128.002804122200017
............................................................................................................................................TTTGTTCGTTTGGCTTA....................................................................17126.002600000000215
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18126.002602200002011
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................20123.002302200001000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................20122.002211143001020
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23122.00220900006070
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................18121.002102100000000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19120.002001411101011
....................................................................................ACTTGGGCCAGGGGAATTCAAACC.....................................................................................................................24120.002000200000000
............................................................................................................GTGAT----CGCA---------ATGCAAAAAG.....................................................................................19117.001701300200020
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC.............................................................24112.001201100000100
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................19112.00123300010050
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................23112.00120900100020
............................................................................................................................................TTTGTTCGTTTGGCTT.....................................................................16111.00110000000092
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................................25111.00110300102050
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTC...............................................................21110.001001000000000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................22110.001001000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................2019.0096100000020
....................................................................................ACTTGGGCCAGGGGAATTCA.........................................................................................................................2019.0090300004020
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1819.0094400000010
....................................................................................ACTTGGGCCAGGGGAATTCAA........................................................................................................................2119.0090300004011
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATA.............................................................2418.0080000002060
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTT............................................................2518.0080000001070
....................................................................................ACTTGGGCCAGGGGAATTC..........................................................................................................................1917.0070700000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................2117.0070500000020
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................2117.0071131001000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA.............................................................2417.0070000001060
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................2317.0070200001040
............................................................................................................................................TTTGTTCGTTTGGCT......................................................................1527.001400000000113
....................................................................................ACTTGGGCCAGGGGAATTCAAA.......................................................................................................................2217.0070200003011
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTGG..........................................................2716.0060000000060
.....................................................................................CTTGGGCCAGGGGAATTCAAACT.....................................................................................................................2316.0060600000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTA................................................................2016.0060400000020
.............................................................................................................................................TTGTTCGTTTGGCTTAAGA.................................................................1915.0050500000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAG..............................................................2215.0050400001000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2315.0050300000002
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA..............................................................2315.0050200000030
............................................................................................................................................TTTGTTCGTTTGGCTTAAGAA................................................................2114.0041200001000
............................................................................................................GTGAT----CGCA---------ATGCAAAAAGT....................................................................................2014.0040310000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTAA.............................................................2424.0080200013020
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTC................................................................2014.0040301000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTCAG.........................................................2813.0030000000030
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTATTT............................................................2413.0030000000030
...............................................................................................................................................GTTCGTTTGGCTTAAGTTT...............................................................1913.0030300000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATAC............................................................2513.0030000000030
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCC..............................................................2313.0030100002000
...................................................................................TACTTGGGCCAGGGGAATTCA.........................................................................................................................2113.0030000003000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATCAG...........................................................2613.0030000000030
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAT..............................................................2113.0030100000020
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTT...............................................................2313.0030300000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG..............................................................2312.0020100000010
droPer2
AG-AGAT--GCACTGCA-TCCAAGGCCTGTGCCTG-----TGCTTGAGAGCCCACCCACCCGAAT------AAGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTGAT----CGCA---------ATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAAG----------TAAACGCCACGTGG------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21117598.0017598185543431009710811095
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22111938.00119381803335422864666423
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2012033.002033303430218221249
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2211776.001776444847351233
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................191801.00801244118578419
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................231788.00788197110246469
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................201401.00401236000039
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................211336.00336929001036
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241228.00228147410076
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231198.001981559100123
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18178.00787422000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................21151.00510480003
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22138.0038141110111
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................19135.00350330002
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21128.00280900019
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23127.002712400011
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20126.00260240002
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20125.00251330009
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22124.002401400010
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................20122.00222110000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19120.00200150005
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................21120.00201500005
....................................................................................ACTTGGGCCAGGGGAATGCAAACT.....................................................................................................................24117.0017356012
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19116.0016061009
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22116.00161120003
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18115.0015370005
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23111.0011321005
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18110.00100100000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................2018.008700001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................................2518.008700001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................2316.006030003
....................................................................................ACTTGGGCCAGGGGAATGC..........................................................................................................................1915.005013001
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1814.004211000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTAA.............................................................2414.004210001
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................2314.004040000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGAA................................................................2123.507301003
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA..............................................................2313.003020001
......................................................................................TTGGGCCAGGGGAATGCAAACT.....................................................................................................................2213.003110001
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................2213.003020001
....................................................................................ACTTGGGCCAGGGGAATGCAAA.......................................................................................................................2213.003011001
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTC...............................................................2113.003030000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTT...............................................................1913.003010002
...................................................................................TACTTGGGCCAGGGGAATGCA.........................................................................................................................2113.003000003
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG.............................................................2413.003010002
............................................................................................................................................TTTGTTCGTTTGGCTTAAC..................................................................1913.003210000
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................1812.002110000
....................................................................................ACTTGGGCCAGGGGAATGCAA........................................................................................................................2112.002010001
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2312.002200000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................2012.002010001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGA..............................................................2312.002010001
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGT.................................................................2112.002200000
......................................................................................................................................AAAAAGTTTGTTCGTTTGGCTTAAGT.................................................................2612.002200000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................2112.002100001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................2412.002100001
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................2212.002020000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTT...............................................................2311.001010000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAG..................................................................2011.001000001
...................................................................................TACTTGGGCCAGGGGAATGCAA........................................................................................................................2211.001001000
...................................................................................TACTTGGGCCAGGGGAATGTT.........................................................................................................................2111.001000001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA.............................................................2411.001100000
................................................................................................................................................TTCGTTTGGCTTAAGTTAAA.............................................................2011.001100000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................2311.001000001
.......................................................................................TGGGCCAGGGGAATGCAAACT.....................................................................................................................2111.001100000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGA.................................................................1911.001010000
......................................................................................................................GCA---------ATGCAAAAAGTTTGTTCGTTTGT........................................................................2611.001001000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT...............................................................2211.001000001
............................................................................................................................................TTTGTTCGTTTGGCTTAG...................................................................1811.001100000
......................................................................................TTGGGCCAGGGGAATGCAAACTT....................................................................................................................2311.001010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAGA.............................................................2411.001100000
........................................................................................................................................AAAGTTTGTTCGTTTGGC.......................................................................1811.001100000
............................................................................................................GTGAT----CGCA---------ATGCAAAAAG.....................................................................................1911.001000001
.........................................................................................................ACTGTGAT----CGCA---------ATGCAAAAAG.....................................................................................2211.001100000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG..............................................................2311.001010000
droAna3
AA-A--AGACAC------------------------------------------CCCACGGAAACG----AGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAT----CGCA---------ATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTTG----------CAAACGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21115124.00151248181508282475986174
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22111581.0011581702464856166361275
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2014855.004855157948575309751
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2213948.003948152519163230931
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1911139.001139567512351528
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................201654.00654633001191
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................211642.00642608210310
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................231459.00459297851112711
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231303.003031093091793
....................................................................................ACTTGGGCCAAGGGAATTCAAACT.....................................................................................................................241233.002337544611790
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211130.0013012500050
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191121.0012111410060
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21179.00799000691
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................21160.006032900271
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23148.004829203140
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................21147.00473001430
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20145.004521001221
....................................................................................ACTTGGGCCAAGGGAATTCA.........................................................................................................................20143.004311011237
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22142.00423800130
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22141.004123200142
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18140.00403900010
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19140.00403900010
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20137.00373700000
......................................................................................TTGGGCCAAGGGAATTCAAACT.....................................................................................................................22130.00302101053
....................................................................................ACTTGGGCCAAGGGAATTCAA........................................................................................................................21129.002970001210
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTAT...............................................................22127.00271000260
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................24127.00271100196
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22124.00242200020
....................................................................................ACTTGGGCCAAGGGAATTCAAAC......................................................................................................................23123.00231070006
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................20119.00192110240
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT...............................................................22118.00180000180
....................................................................................ACTTGGGCCAAGGGAATTCAAA.......................................................................................................................22117.00174000112
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18117.00171101230
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT...............................................................22117.00170000170
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18112.00121101000
.....................................................................................CTTGGGCCAAGGGAATTCAAACT.....................................................................................................................23111.0011900002
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24111.0011300080
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................23110.0010800110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23110.0010900010
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19110.0010900010
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................20110.00101000000
......................................................................................TTGGGCCAAGGGAATTCAAACTGT...................................................................................................................2419.009200070
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................1819.009900000
......................................................................................TTGGGCCAAGGGAATTCAAACTG....................................................................................................................2318.008300050
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................2218.008800000
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................1917.007300031
......................................................................................TTGGGCCAAGGGAATTCAAA.......................................................................................................................2016.006100032
....................................................................................ACTTGGGCCAAGGGAATTCAAACC.....................................................................................................................2416.006050010
....................................................................................ACTTGGGCCAAGGGAATTCAAACTT....................................................................................................................2515.005100013
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................2214.004400000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTT...............................................................1924.008700010
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................2314.004400000
.....................................................................................CTTGGGCCAAGGGAATTCAAAC......................................................................................................................2213.003300000
............................................................................................................................................TTTGTTCGTTTGGCTTAAT..................................................................1913.003000030
....................................................................................ACTTGGGCCAAGGGAATTC..........................................................................................................................1913.003200010
....................................................................................ACTTGGGCCAAGGGAATTT..........................................................................................................................1913.003000012
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTA................................................................2013.003300000
....................................................................................ACTTGGGCCAAGGGAATTCT.........................................................................................................................2013.003200010
......................................................................................TTGGGCCAAGGGAATTCA.........................................................................................................................1813.003200100
......................................................................................TTGGGCCAAGGGAATTCAAAC......................................................................................................................2113.003300000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTT............................................................2513.003200010
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................2313.003200010
...............................................................................................................................................GTTCGTTTGGCTTAAGTTAT..............................................................2012.002200000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................2412.002200000
........................................................................................GGGCCAAGGGAATTCAAACT.....................................................................................................................2012.002200000
....................................................................................ACTTGGGCCAAGGGAATTCAT........................................................................................................................2112.002000020
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC..............................................................2212.002200000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTC................................................................2012.002200000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAT..............................................................2112.002200000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................2112.002200000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................2012.002100010
......................................................................................TTGGGCCAAGGGAATTCAAACTT....................................................................................................................2312.002100010
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGT.................................................................2112.002200000
droBip1
AA-AGTT--GGTGGAGCTCC-C------------------------AGAGACACCCCACGGAAACG----AGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CGCA---------ATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTTG----------CAAACGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AG-AGAT--ACTTTA--------------------------------------------------CTCTTCGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CGCAA--------TTACCAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAAAAACACACAGACAAACGCCACGTGG-T----------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TG-G--AACCACCA---------------------------------------------------GATCCCCGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTGAT----CGCA-----------GCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGATT----------TAAGCGCCACGTGG-TG---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AA-AAAA----------------------------------------------------------------GGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTAAT----TGCA---------ATGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGATT----------TAAACGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CA-ACGAACTATCA---------------------------------------------------GTATCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTTTT----CGCA---------CTGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGATT----------TAAACGCCACGTGG-TGGAGATCGGTTCGGTTCTATATSizeHit CountTotal NormTotal
No Reads
droBia1
CTCG-CAGACGGCG---------------------------------------------------GAGTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CC--------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGATT----------AAAGCGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GA-G--T--GGTTTAA------------------------A--------------------GTATCCCTTTGGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTGAT----CG--------------CTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GT-G-G-ACTATCA---------------------------------------------------CTATCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----CG--------------TTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGATT----------AAATCGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotal
No Reads
dm3
TG-G--AGCCATCCG----------------------------------------------AAACCCCTTCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................211153585.0015358500001260008288220000000078637031161013041414201322141921229262466000032371700000000000000000321341505010053332397186122253759202794663067003211293235111531858446602622912260598121850103910116200106001022319078041000005501102303260261015047110138680216781806001421339756893351640009964107871170200313816770541114102201311178489479372042811041363382300475004423201486208205525203147212400239001002013550110108694122811882512302111158171174257281894217299192588151330982619902975308934011157126662221300214061104203132191352657515765675811445110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................221100626.001006260000247103335737480000010051076702034381615644281110134649142111768400010384340000000000000000053123142706820012675496142915983561600142589873581032020445690173541689257129190151642107251299711015101513010169505243683129700000000040250250030863496284216946481322171000140593732474271064105415866252704000107660044434000130279804566209491051452371121001259003714300104973203731803122461117570501135000000062214302137931152188823175001111271169823316184453192140112143013433213129169933469647031196102251241920009651378913175031998336444773132620237
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................20124344.0024344000004000020400000000003901000212484180010100304040343000000300000000000000000000010300000055180352351121018301211001007402201809603020007417181110220000010010000120350032000000000001930017001057314016025010000026192968993240001398066700100079201001100024383661521416237924100533004230084502001073031402000800000003000500001213852521800000302927494112324137144923632339178901248178900249392420000310018493936581040151711921531201030
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2418870.00887000001100353110000000000000001000000110000000011003010000000000000000000000000000031124680006029006313443073384000000331712016000000101000000000000000304190000004050000000000000240300061112033000002518250254005302335020008800000000134206810441311126500001000203166039100018602390100080000000100000002147161500000734772348112430283166152480364320021011174610002043100829239924944276941057150510
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1917693.007693000000000000000000000012700003338110000000010001000000000030000000000000000000000010000002220110102700540100001111010002000000101644951012000005000000000040000000000000003501002833320650010006561201787000397016000000110000000000915190950011000000005100147041000013711800100020010000001001001622306111000007129210138034017572167532040454300351410000000010542111467379412390484000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2216079.0060790000000001000000000000012000000000000001000100000000000000000000000000000000000000000200021100007330043018000001110001200100030002016600000000000000000000500000000000000017130120031316010015100000721612126700013921870000017600000000057301324993122400005200430111010029006301000000000000010100003142001000001191118045753102373133124030212382001061311000000000814191407231276318350000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2314461.00446100000200006110000000000180000000000000000020010020101000000000000000000000000000011000000251611612879204229340000309102102202003000302094000100040000000000002000000000000000121701200254215050200020011215149810001200134000000340000000002834161061108154600016944001716022010008013301000100000002000000041411015114000001112111421691397309722141734003692720010410000000000001921451169187231211000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC.............................................................2413896.003896000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000022951599000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................2112048.0020480000000000110000000000010100000000000000000000000001000000000000000000000000000020005010701401132225013719000002130002000000000000000000000000000000000040000000000000000001001000000000000012408220002501000000000300000161003319560001001000000000330900000120150000010000100000000000111021100000521341910511213158601028600153011000000001247309142122271225000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................2311470.0014700000000001001000000000020000000000000000000000000000000074100000000000000000000000000000004001022100671200000004100701100000200030000000000000000000000000000000000000540100041211010320000045534220003906400000030000000000441334156362100001114900102030000010001200000100000000000000010000100000008333039412102151034107056660002100000000000102315533586773000000
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................221980.009800000000000010000000000010000000000100000000000000000000000000000000000000000000000000000305004007010620000003001203000000000000000000000000000000000010000000000000000000000200000000000001204310005034000000120000000001271700000001000000003801000004003000001000000000000000001400000000002101188104082232026310021201100020000933188956511087000000
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................201894.008940000000000000000000000000000000000170000000000000100000000000000000000000000000000000000041500214600030100000100000100000000000000000000000000000000000000000000000000000000000000000000000803200002015000000000000000000281900001000000000004302000004007000000000000000000000000301000000031001672060002230373400114011000000006711246397143111000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................211857.008570000000000201000000000080000000000000000000000000000000055100000000000000000000000020000215014051730126010000002107060010000000303010000000000000000000000000000000000024062011814401314000000361551000470510000000260000000023510000220010000010013140300000000200000000000000000000001010600000000222141176090341260264200315001000000003637917264528100000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................201682.0068200000000000000000000000200000251401000000000000000000000010000000000000000000000000000000000000013001101000000111103011020100020010000000000000000000000000000000000005802000162500000000003490410000270340000000000000000000760000010000000000340200000300500000100000000000000000010001000002003054101301122303253002000000000000048410618263431000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTATC..............................................................231446.004460000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262184000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................231441.00441000000000100000000000000000000000000000000000000000000000000000000000000000000000008000000200100000000200000013010101000000000000000010000030100100005000000000000000100000001000000000000191251000201200000002000000000516100021020100001000670410000800400000000000000000000001020000000002000284101130170101600001010000000003205021356224010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................241392.003920000000000010000000000000000000000000000000000000000000010000000000000000000000000010000002000001001100000000000000000000000000100000000000000000000000000000000000000100000300000000000004501100003029000000000000000000430121201120000310043040000030020000000000000000000000101000100000000527219901000001502770000000000000100190154141417000010
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................221374.00374000002000000000000000002000000000000000000000000010000000000000000000000000000000000100000100001200010000000010000003000000004028600000000000000000000000000000000000011010000000000000000062900009050000000100000000001010000000000001870012010000040010000000000000000000000201000300000102001913111321519502521000020000000000090144195000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241352.00352000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000001000000000000000000000000000000010000000000000170810001023000000100000000001011000011010000210023010000000000000000000000000000001000010000000002101242040021130242300101001000000002316329143621000000
...................................................................................TACTTGGGCCAAGGGAATGCAA........................................................................................................................221235.00235000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000612200006020000000000000000000101000000000000000010010000000010000000000000000000000000000000000000100110100007014100000000000000000300298163418010000
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................191228.002280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000004050000003000000000000000000068000000000000000044010000000020000000000000000000000001010000000101011110101007071200000011000000001514910173524000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................231217.002170000000000000000000000000000000000000000000000000000000000000000000000000000000000003000001000003000100000000001002000000000000000000000000000000000000000000000000000002000100000100000001118000030500000000000000000001000000300000034260031000000030010000000000000000000000000000000000001001281051101120107000010000000000030164469000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................221207.002070000110000011000000000020000000000000000000000000000000000000000000000000000000000000000200000008001100000000020000000000000000010000000000000000000000000000000000001000000100000200000001708000012040000000000000000000110000000000000000110100000100600000000000000000000001000000000000010012970301101401110000000000000000013113610105000100
...................................................................................TACTTGGGCCAAGGGAATGCA.........................................................................................................................211192.00192000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000001000002100000000000200000000000000000000000000000000000000000000000000000000000000000000000801200007011000000000020000000011000000000000000000000000010010000000000000000000000000000000000000000100100001101270000000000000000200394121913000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................201189.001890000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000003010000200000000000000000000010000000000000310001010000010010000000000000000000000010000000000100000410600021301515000000000000000023050104917000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................211168.00168000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000110000100000100000000000000000000000000000100000000000000001000000000000000000100010100000000000814000060400000000000000000003300000100000045000000000000002000000000000000000000021401000000011100011080000110411000000000000000011127351210000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................211167.001670000020000102000000000020000000000000000000000000000000000000000000000000000000000000000100000002000100000001000000002000000000000000000000000000000000000000000000000000000100000000000011305000017030000000000000100000300000000000001000010200000100100000000000000000000000000000000000002002106000019011120000000000000000501649610000000
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................181143.00143000000000000000000000000000001010100000000000000000000000200000000000000000000000000000010000103300010000000010000200000000001300002120000020000000000000000000000000001000001100000200000222410008010000000000000000003780000000000000000100000000000000000000000001000000000000001000001001014301300001105300000000000000001063125000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................231130.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000008080000502000000110000000000031000001000000000001000000011010000000000000000000000000000000000000101310120006012170000100000000000601528107000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................21198.00980000000000002000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001100000000000200000005010000003000000000000000000060000000000000000000000000020020000000000000000000000000100000000411000000240000120141100000000000000000000210000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................25187.008700000000000000000000000000000000000000000000000000000000000000000000000000000000000300000010000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000010000000000000000000220000010000000000000000000000100000000000000000000000010000000000000010000000050120000000000000000612583156000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................23184.008400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000004632000001000000000000000000000000000000000000000000000000100000000100000000000000000000000100000000
...................................................................................TACTTGGGCCAAGGGAATGCAAA.......................................................................................................................23178.00780000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001200000000000000000000000000000000000000000000000000000000000000000000000100000000000005040000406000000000000000000000100000000000000000000000001000000000000000000000000000000000000000010100000003004000000000000001050765109000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................19177.00770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000010001000000000000000000000000000000001100000210000000000003030000403000000000000000000020001101000000000000000000000000000000000000000000000000000000000000000000200005023000000000000000010094375000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................20168.00680000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000001000000000000000000000000000000000000000100000100000000000003010000401000000000000000000040000000000000000000000000000000000000000000000000000001000000000000000110110111605400000000000000004061124000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................20164.006400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000140100002000000000000000100000100000000000000000000000000100100000000000000000000000000000000000110001111200007061100000000000000004012011000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................19163.00630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004010000102000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000030201006006000000000000000020184235000000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................21154.005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000020000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000020050000000000000000411023913000000
....................................................................................ACTTGGGCCAAGGGAATG...........................................................................................................................18154.00540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000034000000000000000010000000000010000000000000000000000001000000000000002100100002035000000000000000010112433000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTATC.............................................................23151.005100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19150.0050000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000304000040300000000000000000000000000000000000000000000001001000000000000000000000000000000000000001110000000400100000000000000004051724000000
...................................................................................TACTTGGGCCAAGGGAATGC..........................................................................................................................20142.00420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001061000000000000000070111363000000
...................................................................................TACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................25140.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000010400000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000004043663010000
....................................................................................ACTTGGGCCAAGGGAATGCAAACTTC...................................................................................................................26140.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................21138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000010100000000000000000101000000000000000000000000000000000000000000001000000002000000000000000000000000000000000000000100000060000200200000000000000004090014000000
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18138.00380000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000001001000000000000001000000000000000000000000000000000000000000000000000000000000000000000003100000100000000000000000000003100000000000000000000000000000000000000000000000000000000000000000010110010100001300000000000000000020211000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20134.0034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000010000000000000304000010300000000000000000010000000000000000001001000000000000000000000000000000000000000000000100110000000101000000000000000002042220000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAT..................................................................19134.0034000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000101000000000000000000001000000000000000000000000000000000000103000010000000000000000000200000000000000002000000000001000000000000000000000000000000000000000000000030000201000000000000000003080110000000
....................................................................................ACTTGGGCCAAGGGAATGCAAAA......................................................................................................................23132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000003000000300000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000100000000000000000056235000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000011000000300000000000000000001000000000000031000000000000000000000000000000000000000010000000000010110000000201200000000000000000041141000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................24130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413000000000000000000000000000000000000000000000000000000000000000100000000000000000000000002000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTATT.............................................................23129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000011000000000000100000020300000000000000000000000000000000000000100000000000000000000000000000000000000010000000000202000000101100000000000000003002022000000
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................22129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100100000000000000000000000000001000000000000000000000000000000000000000200000000002100101000000000002053224000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000100000000000001000000000010000000000000000000000000000000000000000000010000000000000101000000200000000000000000000000000000000001000001000000000000000000000000000000000000000000001000000001100101200000000000000000020133000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................................25128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000200000000000000000000001000000000000002000000000000000000000000000000000000000010000000000200000000102000100000000000003042201000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACATC...................................................................................................................26128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CTTGGGCCAAGGGAATGCAAACT.....................................................................................................................23127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000100000000000000000200000000000000000000000000000000000000000000000000010000000000200000000000000004023035000000
...................................................................................TACTTGGGCCAAGGGAATGCAAAC......................................................................................................................24126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000100000000000000000000200000000000000000000000000001000000000000000000000000000000000000000000000000001300000000000000001051233000000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19124.0024000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000200000010000000000000000000000000000000000000000000000000000000000000000000000000011000000000000210000070000000000000000000003100000000000000000000000000000000000000000000000000000000010000000010100000000000000000000000000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................23122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000100000000000000000000000000000000012000000000000000000000000000000000000000000000000000000011020100100000000000000000002050001000000
....................................................................................ACTTGGGCCAAGGGAATGCAAT.......................................................................................................................22121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000001000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001031433000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101112000000000000000000000000000000000010000000000000000000001000010000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000001030101000000
....................................................................................ACTTGGGCCAAGGGAATGT..........................................................................................................................19117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100200000000000000000033105000000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................18117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100010000000000000000000000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTTC..........................................................27117.00170000000000000000000000000000000000000000000000000000000041210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTTCA.........................................................28116.00160000000000000000000000000000000000000000000000000000000061000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G-----AGCCATCC-----------------------------------------------GAATCCCTACCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TAGAG------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21161692.0061692195830051237059673244100244189385396401474216410252599
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22155802.0055802698970332984120102233452282585777272143292249053926110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................20113460.001346047883742065961374424432322847021815948
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1917728.007728233497750124174851116815524802421
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2313808.003808921931232240003027926411241075125
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2212826.00282644154423523009311024670002
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................2411167.001167498481317007115803098000
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................1811077.00107781660884524111000021011
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111009.00100914321338313112069051258001
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231983.009831738418458761022011416111
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................201769.0076991227465801214402171000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................201749.00749346981250000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................241538.005381144931010001370098000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................201381.0038125351410000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................201368.00368283151700210000014000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................211241.00241182021900000010001000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................231140.0014069817200003201010001
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191116.0011621714547000000004000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................211108.001081617340000000005000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21198.009845211500110000024000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22178.0078357090000100008000
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18175.0075070560200000001000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22168.00682304900100000022000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................21153.00530603400000000013000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGAA................................................................21149.0049148000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................19246.5093478010001000009000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23141.0041030230000100104000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24140.0040122613000000007000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................................25139.00391134000011000019000
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................23138.00382210410000017011000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19135.0035042272000000000000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................18134.0034491910010000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20133.00330221910000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22126.0026060160000000004000
............................................................................................................................................TTTGTTCGTTTGGCTTAAC..................................................................19126.0026224000000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22125.0025020130000000019000
............................................................................................................................................TTTGTTCGTTTGGCTTAAT..................................................................19122.0022219010000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................24118.001808700000200001000
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18114.001404052000003000000
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................21112.001200010020000306000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19111.001102017000001000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA.............................................................24110.001017100000000001000
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................2219.00900000000000702000
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................2019.00900011010000501000
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................2218.00813200000000101000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................2318.00806000000000002000
................................................................................................................................................TTCGTTTGGCTTAAGTTAA..............................................................1917.00704300000000000000
............................................................................................................................................TTTGTTCGTTTGGCT......................................................................1527.001400000010148000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTAT...............................................................2216.00605000000000001000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2316.00603200000000001000
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................1915.00501003000000100000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT...............................................................2215.00504010000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTA....................................................................1714.00400000000300001000
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................2514.00400000000000301000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................2214.00400040000000000000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................2114.00400000000000004000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT...............................................................2214.00402020000000000000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................2314.00400040000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC..............................................................2214.00402000000000002000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTAC...............................................................2214.00404000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAAA.................................................................2053.4017115000000000001000
....................................................................................ACTTGGGCCAAGGGAATGCAAACC.....................................................................................................................2413.00301000000000200000
............................................................................................................................................TTTGTTCGTTTGGCTTAG...................................................................1813.00303000000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTAG...............................................................2213.00301000000000002000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGGG................................................................2113.00303000000000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTG................................................................2013.00300030000000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG.............................................................2413.00300000010000002000
...................................................................................TACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2513.00300000000000300000
............................................................................................................................................TTTGTTCGTTTGGCTT.....................................................................1613.00300000000011001000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTAA.............................................................2422.50514000000000000000
droSec2
CT-G-GAGCCATCC-----------------------------------------------GAATCCCTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TAGAG------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21131577.003157717403124691229476
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22127821.00278211662378433003352
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2014042.0040421641220811479
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2212943.002943137415231828
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2411740.00174063335131428
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111530.001530142073361
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2011430.001430136052144
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2311028.0010285044426220
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................191653.006534111882430
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231359.00359169168193
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211124.001241111300
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191115.00115109420
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................21195.009593200
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................23190.00901120554
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................21177.0077557105
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20177.007770241
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................24176.00761252102
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19163.006361020
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................22157.0057535152
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................20154.00541024191
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22146.004641500
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22141.0041132521
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................19135.003538222
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23135.0035111752
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21133.0033211101
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18132.003231100
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20129.0029111503
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22121.002113530
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23120.002011810
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................25118.00182835
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................23116.001614200
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24116.001641020
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................20116.001614200
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT...............................................................22112.001212000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................23112.001212000
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18111.00115060
.....................................................................................CTTGGGCCAAGGGAATGCAAACT.....................................................................................................................23111.00119110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................21110.00102800
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22110.00107300
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19110.00108011
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTG...............................................................2119.0099000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1819.0097200
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................2219.0090450
...................................................................................TACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2519.0090180
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................2018.0087100
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................2217.0077000
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................1817.0076100
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................2016.0061500
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................................2516.0062220
............................................................................................................................................TTTGTTCGTTTGGCTTAAGAA................................................................2115.0050500
....................................................................................ACTTGGGCCAAGGGAATGCAAACA.....................................................................................................................2415.0051310
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................1815.0055000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................2115.0050401
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC..............................................................2215.0053101
...................................................................................TACTTGGGCCAAGGGAATGCAA........................................................................................................................2214.0041210
....................................................................................ACTTGGGCCAAGGGAATG...........................................................................................................................1814.0040121
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTG................................................................2014.0044000
....................................................................................ACTTGGGCCAAGGGAATGCAACT......................................................................................................................2314.0040040
............................................................................................................................................TTTGTTCGTTTGGCTTAAC..................................................................1914.0041300
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT...............................................................2213.0030300
....................................................................................ACTTGGGCCAAGGGAATGCAAACTA....................................................................................................................2513.0030111
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG.............................................................2413.0030300
...................................................................................TACTTGGGCCAAGGGAATGCA.........................................................................................................................2113.0030300
...................................................................................TACTTGGGCCAAGGGAATGCAAAC......................................................................................................................2413.0031101
...................................................................................TACTTGGGCCAAGGGAATGC..........................................................................................................................2013.0030210
............................................................................................................................................TTTGTTCGTTTGGCTTAAT..................................................................1913.0032100
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................1922.5053101
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAT..............................................................2112.0022000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG..............................................................2312.0022000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG..............................................................2312.0022000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA..............................................................2312.0021100
droYak3
CATG-GAGCCATCC---------------------------------------------------GAGTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----GC--------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTGG-TGGAG------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21135151.0035151140521767728710365167432380260
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22131462.003146256519472726540050100358171210
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2013568.0035683212033328093582730102
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2413027.003027374263822401870000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2211853.00185336135114951122990000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2011800.0018004177111000140000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111704.0017041167018000150000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2311500.0015001281061739572141020
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................191720.007201574021427101240130
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................211442.004428143000120000
....................................................................................ACTTGGGCCAAGGGAATGCAAACC.....................................................................................................................241406.004060040600000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231306.003062520525003480000
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................231273.0027301624860030000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191151.001510148100020000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211120.001200118100010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241109.0010957265100200000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGC.................................................................201102.001022227600020000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................221100.00100099100000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20196.0096093000030000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22181.0081069420060000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19180.0080073100150000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22175.00758174000181000
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................21159.00590179011310000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23155.00559251700130000
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................20137.00370151101190000
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................22136.00360810300150000
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18133.0033033000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21128.0028223200010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23126.0026115000190000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................20123.0023174100010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20120.0020413100020000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19119.0019115000030000
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................18116.001629101120000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................22116.0016115000000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................18114.0014013000010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24113.001343210030000
.....................................................................................CTTGGGCCAAGGGAATGCAAACT.....................................................................................................................23112.001205700000000
...................................................................................TACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................25112.001204700010000
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18111.0011010000010000
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................23110.0010010000000000
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................22110.001002700010000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................2119.00910800000000
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................1919.00903200040000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................2218.00807100000000
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1817.00725000000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................2516.00602400000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................2316.00606000000000
.......................................................................................TGGGCCAAGGGAATGCAAACT.....................................................................................................................2116.00600500010000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAA..............................................................2115.00505000000000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................2115.00503000020000
......................................................................................TTGGGCCAAGGGAATGCAAACTGT...................................................................................................................2414.00401300000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG..............................................................2314.00404000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................1923.50734000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA.............................................................2313.00303000000000
.....................................................................................CTTGGGCCAAGGGAATGCA.........................................................................................................................1913.00303000000000
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC..............................................................2213.00303000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGA..............................................................2313.00303000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGAC................................................................2113.00300300000000
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................2023.00606000000000
.....................................................................................CTTGGGCCAAGGGAATGCAAAC......................................................................................................................2213.00302100000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC..............................................................2313.00303000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAGA.............................................................2412.00202000000000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTAA..............................................................2012.00202000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC.............................................................2412.00220000000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGCC................................................................2112.00200200000000
droEre2
TT-G-GAGCCACCA---------------------------------------------------CCATCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT----GC--------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACT----------AAAGCGCCACGTCG-AGGAG------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTT................................................................21156500.00565002563514533901252684520520
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA...............................................................22148975.00489752162920143052722322815270
............................................................................................................................................TTTGTTCGTTTGGCTTAAGT.................................................................2018115.00811524188150453172450
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT...............................................................2214850.0048502180253112535780
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA..............................................................2312361.0023617602716514261270
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTT................................................................2012009.002009195531040100
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTA...............................................................2111746.00174616914014280
....................................................................................ACTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2411093.00109390154101403603390
............................................................................................................................................TTTGTTCGTTTGGCTTAAG..................................................................1921071.50214349631631527980
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT..............................................................231724.00724186571508170
....................................................................................ACTTGGGCCAAGGGAATGCAA........................................................................................................................211178.0017813015143160
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTT...............................................................211175.00175166000720
.............................................................................................................................................TTGTTCGTTTGGCTTAAGT.................................................................191165.00165157010700
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA.............................................................241130.0013015011102110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTG................................................................211116.00116111110300
....................................................................................ACTTGGGCCAAGGGAATGCA.........................................................................................................................201115.001151701184120
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG...............................................................22195.0095410115020
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTA...............................................................20192.009290200000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC...............................................................22187.00873011004330
..............................................................................................................................................TGTTCGTTTGGCTTAAGTT................................................................19182.008277100220
....................................................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................................................23179.00799240629110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTC................................................................21175.0075459101100
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC..............................................................23171.0071203014340
....................................................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................................................22165.006531064870
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG..............................................................23161.0061220003450
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA..............................................................22155.005554000100
....................................................................................ACTTGGGCCAAGGGAATGC..........................................................................................................................19138.003822042280
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT.............................................................24133.003331002900
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTA................................................................21231.5063333002610
............................................................................................................................................TTTGTTCGTTTGGCTTAAGA.................................................................20226.0052140003530
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA..............................................................23121.002112000900
.............................................................................................................................................TTGTTCGTTTGGCTTAAG..................................................................18221.004240000110
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT..............................................................22116.001615000100
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................................22116.001616000000
....................................................................................ACTTGGGCCAAGGGAATGCAAACC.....................................................................................................................24115.001501500000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT...............................................................22113.001312000100
....................................................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................................................25112.00121000740
...............................................................................................................................................GTTCGTTTGGCTTAAGTT................................................................18111.00116000230
...........................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA...............................................................23110.001010000000
...............................................................................................................................................GTTCGTTTGGCTTAAGTTA...............................................................19110.00107000300
.............................................................................................................................................TTGTTCGTTTGGCTTAAGTTG...............................................................2119.0099000000
.....................................................................................CTTGGGCCAAGGGAATGCAAACT.....................................................................................................................2319.0095002020
............................................................................................................................................TTTGTTCGTTTGGCTTAA...................................................................1828.00168000710
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG..............................................................2317.0077000000
............................................................................................................................................TTTGTTCGTTTGGCTTAAGG.................................................................2036.331912001510
....................................................................................ACTTGGGCCAAGGGAATG...........................................................................................................................1816.0060000420
..............................................................................................................................................TGTTCGTTTGGCTTAAGT.................................................................1816.0066000000
....................................................................................ACTTGGGCCAAGGGAATGCAT........................................................................................................................2116.0060000600
............................................................................................................................................TTTGTTCGTTTGGCTTAAA..................................................................1925.50111000910
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTT...............................................................2025.00109000100
...................................................................................TACTTGGGCCAAGGGAATGCA.........................................................................................................................2115.0051000310
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATA.............................................................2414.0040000220
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTT............................................................2514.0040000400
...................................................................................TACTTGGGCCAAGGGAATGCAA........................................................................................................................2214.0040001210
......................................................................................TTGGGCCAAGGGAATGCAAACT.....................................................................................................................2214.0040101200
......................................................................................TTGGGCCAAGGGAATGCAAACTGT...................................................................................................................2414.0041010110
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG..............................................................2323.5075000200
............................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG.............................................................2413.0031000200
................................................................................................................................................TTCGTTTGGCTTAAGTTA...............................................................1813.0032000100
.....................................................................................CTTGGGCCAAGGGAATGCAA........................................................................................................................2013.0031000200
..............................................................................................................................................TGTTCGTTTGGCTTAAGTTAG..............................................................2113.0033000000

Generated: 10/20/2015 at 06:53 PM