ID:

dwi_1896

 Coordinate:

scf2_1100000004711:5997-6147 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.8 -5.7 -5.5

Flybase annnotation

exon [dwil_GLEANR_4326:2]; CDS [Dwil\GK21281-cds]; intron [Dwil\GK21281-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-13_DWil-I-intLTRGypsy+
mature
  1. scf2_1100000010605:1263-1288 -
  2. scf2_1100000001636:7349-7374 -
  3. scf2_1100000006927:1023-1048 -
  4. scf2_1100000004601:3534-3559 -
  5. dwi_1896  scf2_1100000004711:6113-6138 +
  6. scf2_1100000004721:357067-357092 -
  7. scf2_1100000004838:6684-6709 +
  8. scf2_1100000004873:22199-22224 -
  9. scf2_1100000004887:147772-147797 +
  10. scf2_1100000004887:447551-447576 -
  11. scf2_1100000004894:20571-20596 +
  12. scf2_1100000004958:286822-286847 -
  13. scf2_1100000004961:2531020-2531045 +
  14. scf2_1100000004967:3857887-3857912 +
star
  1. scf2_1100000002972:4314-4337 +
  2. scf2_1100000001636:7390-7413 -
  3. scf2_1100000004490:23721-23744 +
  4. dwi_1896  scf2_1100000004711:6074-6097 +
  5. scf2_1100000004721:357108-357131 -
  6. scf2_1100000004838:6645-6668 +
  7. scf2_1100000004838:42810-42833 +
  8. scf2_1100000004873:22241-22264 -
  9. scf2_1100000004887:147733-147756 +
  10. scf2_1100000004894:20532-20555 +
  11. scf2_1100000004954:30655-30678 -
  12. scf2_1100000004958:286863-286886 -
  13. scf2_1100000004958:1239453-1239476 +
  14. scf2_1100000004961:2530981-2531004 +
  15. scf2_1100000004967:3857848-3857871 +
  16. scf2_1100000001101:1347-1370 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGGCGGACCAGGCCCTCGGTAAGGTGCGCGATTGGATGAACAAGTCCGAACGACCGCCTAAACCAACATTGTGGGGCGAGAGCCCAAAAATTAGAGCTTTGTGGGATCTCTAAGACCGATTAGCCTTTGATGAAATAGGAGTGATTACCATAAAAAACTCGGAGAATATACCGGTAGCCCTTATGCCCCGCTTACTGGTAGATGCTGCCATTCGAGGCGTGCACGACTCTTTATCCGGAGGTCACTTCAGT
*******************************************************************************************************************************............((((.....(((((.....((((........))))......)))))...))))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
................................TGGATGAACAAGTCCGAACGACCGCC................................................................................................................................................................................................. 26 0 15 1.07 16 16 0 0 0
................................................................................................................................................................................................................................GACTCTTAATCCGTAGGT......... 18 2 2 1.00 2 2 0 0 0
................................TGGATGAACAAGTCCGAACGACCG................................................................................................................................................................................................... 24 0 15 0.87 13 13 0 0 0
................................................................................................................................................................................................................................GACTCTTAATCCGTGGGTC........ 19 3 20 0.75 15 15 0 0 0
................................TGGATGAACAAGTCCGAACGACC.................................................................................................................................................................................................... 23 0 17 0.35 6 6 0 0 0
..................................................................................................................................................................................CCTGATGCCGCGCTTACT....................................................... 18 2 3 0.33 1 1 0 0 0
......................................................................................................................................................................TATACCGGTAGCCCTTATGCCCCGCT........................................................... 26 0 14 0.21 3 2 1 0 0
...............................................................................................................................TGATGAAATAGTAGTGATTACCAT.................................................................................................... 24 1 18 0.17 3 1 2 0 0
...................................................................................................................................................................................................TGGTAGATGTTGCCATTCGAGGCGT............................... 25 1 12 0.17 2 0 2 0 0
........................................................................................................................................................................TACCGGTAGCCCTTATGCCCCGC............................................................ 23 0 15 0.13 2 2 0 0 0
........................................................................................................................................................................TACCGGTAGCCCTTATGCCCCGCT........................................................... 24 0 15 0.13 2 0 2 0 0
................................TGGATGAACAAGTCCGAACGACCGC.................................................................................................................................................................................................. 25 0 15 0.13 2 1 0 1 0
...............................................................CAACATTGTAGGGCGAGAGC........................................................................................................................................................................ 20 1 17 0.12 2 1 1 0 0
..........................CGCGATTGGATGAACAAGTCCGAACG....................................................................................................................................................................................................... 26 0 18 0.11 2 2 0 0 0
..GCGGACCAGGCCCTCGGTAAGGTGCGC.............................................................................................................................................................................................................................. 27 0 11 0.09 1 1 0 0 0
...................................................................................................................................................................................................TGGTAGATCTTGCCATTCGAGGCG................................ 24 2 12 0.08 1 1 0 0 0
.....GACCAGGCCCTCGGTAAGGTGCGC.............................................................................................................................................................................................................................. 24 0 12 0.08 1 0 1 0 0
...................................................................................................................................................................................................TGGTAGATGCTGCCATTCGAGGCGTATT............................ 28 3 12 0.08 1 0 1 0 0
.GGCGGACCAGGCCCTCGGTAAGGTG................................................................................................................................................................................................................................. 25 0 12 0.08 1 1 0 0 0
...................................................................................................................................................................................................TGGTAGATGTTGCCATTCGAGGCG................................ 24 1 12 0.08 1 0 1 0 0
..................................................................................................................................................................................................CTGGTAGATGTTGCCATTCGAGGC................................. 24 1 13 0.08 1 1 0 0 0
AGGCGGACCAGGCCCTCGGTAAG.................................................................................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0
...CGGACCAGGCCCTCGGTAAGGT.................................................................................................................................................................................................................................. 22 0 13 0.08 1 1 0 0 0
..................................................................................................................................................................................................CTGGTAGATGTTGCCATTCGAGG.................................. 23 1 14 0.07 1 1 0 0 0
AGGCGGACCAGGCCCTCGGTA...................................................................................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0
.............................................................................................................................................................................................................TGCCATTCGAGGCGTGCACGACTCT..................... 25 0 14 0.07 1 1 0 0 0
...................................................................................................................................................................................................TGGTAGATGCTGCCATTCGAGGC................................. 23 0 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................TGTTGCCATTCGAGGCGTGCACGAC........................ 25 1 14 0.07 1 1 0 0 0
.............................................................................................................................................................................................................TGCCATTCGAGGCGTGCACGACTC...................... 24 0 14 0.07 1 0 1 0 0
...............................................................................................................................................ATTACCATAAAAAACTCGGAGAATA................................................................................... 25 0 14 0.07 1 1 0 0 0
.............................................................................................................................................................................................................TGCCATTCGAGGCGTGCACTACTC...................... 24 1 14 0.07 1 0 1 0 0
AGGCGGACCAGGCCCTCGGTAA..................................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0
.................................................................................................................................................................................................ACTGGTAGATGTTGCCATTCGAGG.................................. 24 1 14 0.07 1 1 0 0 0
.............................................................................................................................................................................................................TGCCATTCGAGGCGTGCACGACT....................... 23 0 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................TGTTGCCATTCGAGGCGTGCACGACT....................... 26 1 14 0.07 1 0 1 0 0
.............................GATTGGATGAACAAGTCCGAACGACCGC.................................................................................................................................................................................................. 28 0 15 0.07 1 1 0 0 0
................................TGGATGAACAAGTCCGAACGACCGCCT................................................................................................................................................................................................ 27 0 15 0.07 1 1 0 0 0
.............................GATTGGATGAACAAGTCCGAACGACCG................................................................................................................................................................................................... 27 0 15 0.07 1 1 0 0 0
....................................TGAACAAGTCCGAACGACCGCCT................................................................................................................................................................................................ 23 0 15 0.07 1 1 0 0 0
................................TGGATGAACAAGTCCGAACGACCGCCTA............................................................................................................................................................................................... 28 0 15 0.07 1 1 0 0 0
................................TGGGTGAACAAGTCCGAACGACCGCC................................................................................................................................................................................................. 26 1 15 0.07 1 1 0 0 0
................................TGGATGAACAAGTCCGAACGGCCGC.................................................................................................................................................................................................. 25 1 15 0.07 1 1 0 0 0
...............................................................................................................................TGATGAAATAGGAGTGATTACCAT.................................................................................................... 24 0 16 0.06 1 1 0 0 0
.....................AGGTGCGCGATTGGATGAACAAG............................................................................................................................................................................................................... 23 0 16 0.06 1 0 1 0 0
...................TAAGGTGCGCGATTGGATGAACAAG............................................................................................................................................................................................................... 25 0 16 0.06 1 0 1 0 0
...................................................................................................................................................................GAATATACCGGTAGCCCTTATGCCC............................................................... 25 0 16 0.06 1 1 0 0 0
....................AAGGTGCGCGATTGGATGAACAAGT.............................................................................................................................................................................................................. 25 0 16 0.06 1 0 1 0 0
......................................................................................................................................................................TATACCGGTAGCCCTTATGCC................................................................ 21 0 17 0.06 1 1 0 0 0
............................................................................................................................CTTTGATGAAATAGTAGTGATTACCAT.................................................................................................... 27 1 17 0.06 1 1 0 0 0
................CGGTAAGGTGCGCGATTGGATGAACA................................................................................................................................................................................................................. 26 0 17 0.06 1 1 0 0 0
.............................................................................................................................TTTGATGAAATAGTAGTGATTACC...................................................................................................... 24 1 17 0.06 1 1 0 0 0
..................GTAAGGTGCGCGATTGGATGAACA................................................................................................................................................................................................................. 24 0 17 0.06 1 1 0 0 0
.......................................................................................................................TTAGCCTTTGATGAAATAGTAGTG............................................................................................................ 24 1 18 0.06 1 0 1 0 0
................CGGTAAGGTGCGCGATTGGATGA.................................................................................................................................................................................................................... 23 0 18 0.06 1 1 0 0 0
........................TGCGCGATTGGATGAACAAGTCCGAA......................................................................................................................................................................................................... 26 0 18 0.06 1 1 0 0 0
.............................AGCTGGATGAACAAGTCCGAACGACC.................................................................................................................................................................................................... 26 3 18 0.06 1 1 0 0 0
...........GCCCTCGGTAAGGTGCGCGATTGG........................................................................................................................................................................................................................ 24 0 18 0.06 1 1 0 0 0
..........................CGCGATTGGATGAACAAGTCCGAA......................................................................................................................................................................................................... 24 0 18 0.06 1 0 1 0 0
................................TGGATGAACAAGTCCGAACGAC..................................................................................................................................................................................................... 22 0 19 0.05 1 1 0 0 0
............CCCTCGGTAAGGTGCGCGATTGG........................................................................................................................................................................................................................ 23 0 19 0.05 1 1 0 0 0
.............................GATTGGATGAACAAGTCCGAACG....................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0
.................................................................................................................GACCGATTAGCCTTTGATGAAA.................................................................................................................... 22 0 19 0.05 1 1 0 0 0
.................................................................................................................................................................................ACCTGATGCCGCGCTTACT....................................................... 19 3 20 0.05 1 0 0 0 1
.........................................................................................................................................................................ATCGGTAGCGCTTATGAC................................................................ 18 3 20 0.05 1 1 0 0 0
................................................................AACAGTGTGGGGCCATAGC........................................................................................................................................................................ 19 3 20 0.05 1 0 0 1 0
...............................................................................................................................TGATGAAATAGGAGTGAA.......................................................................................................... 18 1 20 0.05 1 1 0 0 0
......................................................................................................................................AGAGGAGTGATTACCATCCA................................................................................................. 20 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

TCCGCCTGGTCCGGGAGCCATTCCACGCGCTAACCTACTTGTTCAGGCTTGCTGGCGGATTTGGTTGTAACACCCCGCTCTCGGGTTTTTAATCTCGAAACACCCTAGAGATTCTGGCTAATCGGAAACTACTTTATCCTCACTAATGGTATTTTTTGAGCCTCTTATATGGCCATCGGGAATACGGGGCGAATGACCATCTACGACGGTAAGCTCCGCACGTGCTGAGAAATAGGCCTCCAGTGAAGTCA
***********************************************************............((((.....(((((.....((((........))))......)))))...))))******************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
.........................................................................................................TGGAGATTCTAGCTAATCAG.............................................................................................................................. 20 3 4 5.00 20 4 0 11 5
..............GAGCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 28 0 17 4.59 78 71 7 0 0
...............AGCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 27 0 17 2.88 49 39 10 0 0
................GCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 26 0 17 1.59 27 19 8 0 0
.................CCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 25 0 17 1.53 26 19 7 0 0
.....................TCCACGCGCTAACCTACTTGTTCAGGCTT......................................................................................................................................................................................................... 29 0 16 1.06 17 13 0 1 3
...............................................................GTTGTAACACCCCGCTCTCGTCTT.................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................................ATAGGCCTCCAGTGAAGT.. 18 0 1 1.00 1 0 1 0 0
.........................................................................................................TGGAGATTCTAGCTAATC................................................................................................................................ 18 2 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................ACGACGGTAAGCTCCGCACGTGCTGA....................... 26 0 14 1.00 14 0 14 0 0
..........CCGGGAGCCATTCCACGCGCTAACCT....................................................................................................................................................................................................................... 26 0 18 0.83 15 12 3 0 0
............GGGAGCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 27 0 18 0.78 14 9 5 0 0
...........CGGGAGCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 28 0 18 0.72 13 4 9 0 0
..........CCGGGAGCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 29 0 18 0.67 12 11 1 0 0
.....................TCCACGCGCTAACCTACTTGTTCAG............................................................................................................................................................................................................. 25 0 16 0.56 9 3 6 0 0
........................................................................................................................................................................................................CTACGACGGTAAGCTCCGCACGTGCTGA....................... 28 0 11 0.55 6 1 5 0 0
......................CCACGCGCTAACCTACTTGTTCAGGCTT......................................................................................................................................................................................................... 28 0 16 0.50 8 7 0 0 1
..CGCCTGGTCCGGGAGCCATTCCAC................................................................................................................................................................................................................................. 24 0 12 0.50 6 2 4 0 0
........................................................................................................................................................................................................CTACAACGGTAAGCTCCGCACGTGCT......................... 26 1 12 0.50 6 4 2 0 0
...........CGGGAGCCATTCCACGCGCTAACCT....................................................................................................................................................................................................................... 25 0 18 0.44 8 0 8 0 0
........................................................................................................................................................................................................CTACGACGGTAAGCTCCGCACGTGCT......................... 26 0 12 0.42 5 1 4 0 0
........................................................................................................................................................................................................CTACAACGGTAAGCTCCGCACGT............................ 23 1 12 0.42 5 4 1 0 0
..................CATTCCACGCGCTAACCTACTTGTT................................................................................................................................................................................................................ 25 0 17 0.41 7 5 2 0 0
...................................................................................................................GGCTAATCGGAAACTACTTTATCAT............................................................................................................... 25 1 18 0.39 7 4 3 0 0
......................CCACGCGCTAACCTACTTGTTCAGGCT.......................................................................................................................................................................................................... 27 0 16 0.38 6 4 0 0 2
..................CATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 24 0 17 0.35 6 4 2 0 0
.............................................................................................................................................................GAGCCTCTTATATGGCCATCGGGAAT.................................................................... 26 0 17 0.35 6 0 6 0 0
.......................................TGTTCAGGCTTGCTGGCGGATTTGGT.......................................................................................................................................................................................... 26 0 3 0.33 1 0 1 0 0
..............GAGCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 25 0 18 0.33 6 5 1 0 0
..............GAGCCATTCCACGCGCTAACCTACTT................................................................................................................................................................................................................... 26 0 18 0.33 6 6 0 0 0
.....................TCCACGCGCTAACCTACTTGTTCAGGC........................................................................................................................................................................................................... 27 0 16 0.31 5 5 0 0 0
..................................................................................................................................................................................................GACCATCTACAACGGTAAGCTCCGCACGT............................ 29 1 10 0.30 3 2 1 0 0
...............AGCCATTCCACGCGCTAACCTACTTGTT................................................................................................................................................................................................................ 28 0 17 0.29 5 5 0 0 0
...........................................................................................................GAGATTCTAGCTAATCAG.............................................................................................................................. 18 2 7 0.29 2 1 0 0 1
...........................................................................................................................................................................................................CAACGGTAAGCTCCGCACGTGCTGA....................... 25 1 14 0.29 4 3 1 0 0
...................................................................................................................................................................................................ACCATCTACAACGGTAAGCTCCGCACGT............................ 28 1 11 0.27 3 3 0 0 0
.CCGCCTGGTCCGGGAGCCATTCCAC................................................................................................................................................................................................................................. 25 0 12 0.25 3 1 2 0 0
.....................TCCACGCGCTAACCTACTTGTTCAGGCT.......................................................................................................................................................................................................... 28 0 16 0.25 4 3 0 0 1
...................................................................................................................................................................CTTATATGGCCATCGGGAATACGGG............................................................... 25 0 16 0.25 4 2 2 0 0
......TGGTCCGGGAGCCATTCCACGCGCT............................................................................................................................................................................................................................ 25 0 12 0.25 3 1 2 0 0
.............GGAGCCATTCCACGCGCTAACCTACTT................................................................................................................................................................................................................... 27 0 18 0.22 4 2 2 0 0
TCCGCCTGGTCCGGGAGCCAT...................................................................................................................................................................................................................................... 21 0 14 0.21 3 0 3 0 0
...........................................................................................................................................................................................................CGACGGTAAGCTCCGCACGTGCTGA....................... 25 0 14 0.21 3 2 1 0 0
...............................................................................................................................................................................TTGGGAATAAGGGGCAAATGA....................................................... 21 3 5 0.20 1 1 0 0 0
.....................TCCACGCGCTAACCTACTTGTTCAGG............................................................................................................................................................................................................ 26 0 16 0.19 3 3 0 0 0
.......................CACGCGCTAACCTACTTGTTCAGGCTT......................................................................................................................................................................................................... 27 0 16 0.19 3 3 0 0 0
.CCGCCTGGTCCGGGAGCCATTCCACGCGC............................................................................................................................................................................................................................. 29 0 11 0.18 2 2 0 0 0
....................................................................................................................................................................................................CCATCTACAACGGTAAGCTCCGCACGT............................ 27 1 11 0.18 2 2 0 0 0
.............GGAGCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 29 0 17 0.18 3 3 0 0 0
..............GAGCCATTCCACGCGCTAACCTACTTGTT................................................................................................................................................................................................................ 29 0 17 0.18 3 3 0 0 0
................GCCATTCCACGCGCTAACCTACTTGTT................................................................................................................................................................................................................ 27 0 17 0.18 3 2 1 0 0
.....CTGGTCCGGGAGCCATTCCACGCGCT............................................................................................................................................................................................................................ 26 0 12 0.17 2 2 0 0 0
.....CTGGTCCGGGAGCCATTCCACGCGC............................................................................................................................................................................................................................. 25 0 12 0.17 2 2 0 0 0
...........CGGGAGCCATTCCACGCGCTAACCTACTT................................................................................................................................................................................................................... 29 0 18 0.17 3 2 1 0 0
............GGGAGCCATTCCACGCGCTAACCT....................................................................................................................................................................................................................... 24 0 19 0.16 3 3 0 0 0
.............................................................................................................................................................................................................ACGGTAAGCTCCGCACGTGCTGAGA..................... 25 0 14 0.14 2 1 1 0 0
........................................GTTCAGGCTTGCTGGCGGATTT............................................................................................................................................................................................. 22 0 16 0.13 2 2 0 0 0
......................CCACGCGCTAACCTACTTGTTCAGGC........................................................................................................................................................................................................... 26 0 16 0.13 2 0 0 0 2
..........................................TCAGGCTTGCTGGCGGATTT............................................................................................................................................................................................. 20 0 17 0.12 2 1 1 0 0
...............AGCCATTCCACGCGCTAACCTACTTG.................................................................................................................................................................................................................. 26 0 17 0.12 2 2 0 0 0
..................................................................................................................TGGCTAATCGGAAACTACTTTATCAT............................................................................................................... 26 1 18 0.11 2 1 1 0 0
............GGGAGCCATTCCACGCGCTAACCTACTT................................................................................................................................................................................................................... 28 0 18 0.11 2 1 1 0 0
...................................................................................................................GGCTAATCGGAAACTACTTTATCATCAC............................................................................................................ 28 1 18 0.11 2 2 0 0 0
.....................................................GGCGGAATTGGTTGTCACCC.................................................................................................................................................................................. 20 3 9 0.11 1 1 0 0 0
...............................................................................................................................................................GCCTCTTATATGGCCATCGGGAATAC.................................................................. 26 0 18 0.11 2 0 2 0 0
.................................................................................................................CTGGCTAATCGGAAACTACTTTATCAT............................................................................................................... 27 1 18 0.11 2 0 2 0 0
.............GGAGCCATTCCACGCGCTAACCTAC..................................................................................................................................................................................................................... 25 0 18 0.11 2 0 2 0 0
..............................................................................................................................................................AGCCTCTTATATGGCCATCGGGAAT.................................................................... 25 0 18 0.11 2 1 1 0 0
..........................GCGCTAACCTACTTGTTCAGGCTTGCT...................................................................................................................................................................................................... 27 0 18 0.11 2 2 0 0 0
................GCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 23 0 18 0.11 2 1 1 0 0
..........CCGGGAGCCATTCCACGCGCTAACCTA...................................................................................................................................................................................................................... 27 0 18 0.11 2 1 1 0 0
..........................................................................................................................................................................................................ACGACGGTAAGCTCCGCACGTGCT......................... 24 0 18 0.11 2 2 0 0 0
.........................................................................................................................TCGGAAACTACTTTATCATCACT........................................................................................................... 23 1 18 0.11 2 2 0 0 0
.......................................................................................................................AATCGGAAACTACTTTATCATCACTAAT........................................................................................................ 28 1 18 0.11 2 2 0 0 0
................................................................................................................................................................CCTCTTATATGGCCATCGGGAATAC.................................................................. 25 0 18 0.11 2 0 2 0 0
...........................................................................................................................................................................................................CGACGGTAAGCTCCGCACGTGCT......................... 23 0 18 0.11 2 2 0 0 0
...........CGGGAGCCATTCCACGCGCTAACCTAC..................................................................................................................................................................................................................... 27 0 18 0.11 2 1 1 0 0
...............................................................................................................................ACTACTTTATCATCACTAATGGTATT.................................................................................................. 26 1 18 0.11 2 2 0 0 0
...........................................................................................................GAGATTCTAGCTAATCAGC............................................................................................................................. 19 3 20 0.10 2 1 0 1 0
.................................................................................................................................................................................................TGACCATCTACAACGGTAAGCTCCGCAC.............................. 28 1 10 0.10 1 0 1 0 0
.............................................................................................................................................................................CATCGGGAAGAGAGGGCGAA.......................................................... 20 3 10 0.10 1 1 0 0 0
.................................................................................................................................................................................................TGACCATCTACAACGGTAAGCTCCGCA............................... 27 1 11 0.09 1 0 1 0 0
...................................................................................................................................................................................................GCCATCTACAACGGTAAGCTCCGCACGT............................ 28 2 11 0.09 1 1 0 0 0
....................................................................................................................................................................................................CCATCTACGACGGTAAGCTCCGCACGT............................ 27 0 11 0.09 1 1 0 0 0
...................................................................................................................................................................................................ACCATCTACGACGGTAAGCTCCGCACGT............................ 28 0 11 0.09 1 0 1 0 0
.................................................................................................................................................................................................TGACCATCTACGACGGTAACCTCCGC................................ 26 1 11 0.09 1 0 1 0 0
..................................................................................................................................................................................................GACCATCTACAACGGTAAGCTCCGC................................ 25 1 11 0.09 1 1 0 0 0
.................................................................................................................................................................................................TGACCATCTACAACGGTAAGCTCCGC................................ 26 1 11 0.09 1 0 1 0 0
..................................................................................................................................................................................................GACCATCTACGACGGTAAGCTCCGCA............................... 26 0 11 0.09 1 0 1 0 0
........................................................................................................................................................................................................CTACGACGGTAAGCTCCGCACGTGCAGA....................... 28 1 11 0.09 1 0 1 0 0
....................................................................................................................................................................................................CCATCTACAACGGTAAGCTCCGCACG............................. 26 1 11 0.09 1 1 0 0 0
........................................................................................................................................................................................................CTACAACGGTAAGCTCCGCACGTC........................... 24 2 12 0.08 1 1 0 0 0
.......GGTCCGGGAGCCATTCCACGCGCT............................................................................................................................................................................................................................ 24 0 12 0.08 1 1 0 0 0
.......GGTCCGGGAGCCATTCCACGCGCTA........................................................................................................................................................................................................................... 25 0 12 0.08 1 1 0 0 0
.....................................................................................................................................................................................................CATCTACAACGGTAAGCTCCGCACGT............................ 26 1 12 0.08 1 1 0 0 0
.CCGCCTGGTCCGGGAGCCATTCCACG................................................................................................................................................................................................................................ 26 0 12 0.08 1 1 0 0 0
....................................................................................................................................................................................................CCATCTACGACGGTAAGCTCCGC................................ 23 0 12 0.08 1 1 0 0 0
.......GGTCCGGGAGCCATTCCACGCGCTAAC......................................................................................................................................................................................................................... 27 0 12 0.08 1 1 0 0 0
.......GGTCCGGGAGCCATTCCACGCGC............................................................................................................................................................................................................................. 23 0 12 0.08 1 1 0 0 0
.CCGCCTGGTCCGGGAGCCATTCCA.................................................................................................................................................................................................................................. 24 0 12 0.08 1 1 0 0 0
....CCTGGTCCGGGAGCCATTCCACGCGC............................................................................................................................................................................................................................. 26 0 12 0.08 1 1 0 0 0
.....................................................................................................................................................................................................CATCTACGACGGTAAGCTCCGCACGT............................ 26 0 12 0.08 1 1 0 0 0
.CCGCCTGGTCCGGGAGCCATTCCACGC............................................................................................................................................................................................................................... 27 0 12 0.08 1 0 1 0 0
.......GGTCCGGGAGCCATTCCACGCG.............................................................................................................................................................................................................................. 22 0 12 0.08 1 1 0 0 0
ACCGCCTGGTCCGGGAGCCATTCCAC................................................................................................................................................................................................................................. 26 1 12 0.08 1 1 0 0 0
TCCGCCTGGTCCGGGAGCCATTCCAC................................................................................................................................................................................................................................. 26 0 12 0.08 1 1 0 0 0
........................................................................................................................................................................................................CTACAACGGTAAGCTCCGCACGTGC.......................... 25 1 12 0.08 1 0 1 0 0
........................................................................................................................................................................................................CTACAACGGTAAGCTCCGCACCT............................ 23 2 12 0.08 1 0 1 0 0
......AGGTCCGGGAGCCATTCCACGCGCT............................................................................................................................................................................................................................ 25 1 13 0.08 1 1 0 0 0
....CCTGGTCCGGGAGCCATTCCACGC............................................................................................................................................................................................................................... 24 0 13 0.08 1 0 1 0 0
..CGCCTGGTCCGGGAGCCAT...................................................................................................................................................................................................................................... 19 0 14 0.07 1 0 1 0 0
....ACTGGTCCGGGAGCCATTCCACGCGC............................................................................................................................................................................................................................. 26 1 14 0.07 1 1 0 0 0
.........................................................................................................................................................................................................TACAACGGTAAGCTCCGCACGTGCTGA....................... 27 1 14 0.07 1 1 0 0 0
...........................................................................................................................................................................................................AGACGGTAAGCTCCGCACGTGCTGAGA..................... 27 1 14 0.07 1 0 1 0 0
.............................................................................................................................................................................................................ACGGTAAGCTCCGCACGTGCTGA....................... 23 0 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................ACAACGGTAAGCTCCGCACGTGCTGAG...................... 27 1 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................ACGACGGTAAGCTCCGCACGTGCTGAG...................... 27 0 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................TTAACGGTAAGCTCCGCACGTGCTGA....................... 26 3 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................ACAACGGTAAGCTCCGCACGTGCTG........................ 25 1 14 0.07 1 1 0 0 0
...........................................................................................................................................................................................................TGACGGTAAGCTCCGCACGTGCTGAGA..................... 27 1 14 0.07 1 0 1 0 0
..........................................................................................................................................................................................................ACAACGGTAAGCTCCGCACGTGCTGA....................... 26 1 14 0.07 1 1 0 0 0
TCCGCCTGGTCCGGGAGCCATT..................................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0
..........................................................................................................................................................................................................ACGACGGTAAGCTCCGCACGTGCCGA....................... 26 1 15 0.07 1 0 1 0 0
...GCCTGGTCCGGGAGCCATT..................................................................................................................................................................................................................................... 19 0 15 0.07 1 0 1 0 0
..................................CTACTTGTTCAGGCTTGCTGGCGGAT............................................................................................................................................................................................... 26 0 15 0.07 1 0 1 0 0
..........................................................................................................................................CTCACTAATGGTATTTTTTG............................................................................................. 20 0 15 0.07 1 1 0 0 0
........................................................................................................................................................................ATGGCCATCGGGAATACGGGGC............................................................. 22 0 15 0.07 1 1 0 0 0
............................................................................................................................................CACTAACGGTATTTTTTGAGCCTCT...................................................................................... 25 1 15 0.07 1 1 0 0 0
......................CCACGCGCTAACCTACTTGTTCAG............................................................................................................................................................................................................. 24 0 16 0.06 1 1 0 0 0
................................................................................................................................CTACTTTATCCTCACTAATGGTATT.................................................................................................. 25 0 16 0.06 1 0 1 0 0
........GTCCGGGAGCCATTCCACGCGCT............................................................................................................................................................................................................................ 23 0 16 0.06 1 1 0 0 0
.................................................................................................................CTGGCTAATCGGAAACTACTTTATCCT............................................................................................................... 27 0 16 0.06 1 1 0 0 0
.....................TCCACGCGCTAACCTACTTGTTC............................................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0
..................................................................................................................TGGCTAATCGGAAACTACTTTATCCT............................................................................................................... 26 0 16 0.06 1 0 1 0 0
.......................................TGTTCAGGCTTGCTGGCGGATTT............................................................................................................................................................................................. 23 0 16 0.06 1 0 1 0 0
...................ATTCCACGCGCTAACCTACTTGTTCAGGC........................................................................................................................................................................................................... 29 0 16 0.06 1 1 0 0 0
.....................................CTTGTTCAGGCTTGCTGGCGGATTT............................................................................................................................................................................................. 25 0 16 0.06 1 0 1 0 0
...........................................................................................................................GGAAACTACTTTATCATCACTAATGGTAT................................................................................................... 29 1 16 0.06 1 1 0 0 0
.......................CACGCGCTAACCTACTTGTTCAGGC........................................................................................................................................................................................................... 25 0 16 0.06 1 0 1 0 0
........................................................................................................................ATCGGAAACTACTTTATCCTCACTAAT........................................................................................................ 27 0 16 0.06 1 0 1 0 0
.......................................................................................................................AATCGGAAACTACTTTATCCTCACT........................................................................................................... 25 0 16 0.06 1 0 1 0 0
...................TCTCCACGCGCTAACCTACTTGTTCAGGC........................................................................................................................................................................................................... 29 2 16 0.06 1 1 0 0 0
...................................................................................................................GGCTAATCGGAAACTACTTTATCCTCACT........................................................................................................... 29 0 16 0.06 1 1 0 0 0
..................CATTCCACGCGCTAACCTACTTGTTC............................................................................................................................................................................................................... 26 0 16 0.06 1 1 0 0 0
......................CCACGCGCTAACCTACTTGTTCAGG............................................................................................................................................................................................................ 25 0 16 0.06 1 0 1 0 0
....................................................................................................................GCTAATCGGAAACTACTTTATCCTCACT........................................................................................................... 28 0 16 0.06 1 0 1 0 0
...............................................................................................................................ACTACTTTATCCTCACTAATGGTATT.................................................................................................. 26 0 16 0.06 1 1 0 0 0
.........................................................................................................................................................................................................................................AGGCCTCCAGTGAAGTCA 18 0 17 0.06 1 1 0 0 0
...........................................................................................................................................................TTGAGCCTCTTATATGGCCATCGGGAAT.................................................................... 28 0 17 0.06 1 1 0 0 0
.................CCATTCCACGCGCTAACCTACTTGTT................................................................................................................................................................................................................ 26 0 17 0.06 1 1 0 0 0
..............GAGCCATTCCACGCGCTAACCTACTTG.................................................................................................................................................................................................................. 27 0 17 0.06 1 1 0 0 0
..............TAGCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 28 1 17 0.06 1 1 0 0 0
.................CCATTCCACGCGCTAACCTACTTG.................................................................................................................................................................................................................. 24 0 17 0.06 1 1 0 0 0
..............GAGCCATTCCACGCGCTAACCTACCTGT................................................................................................................................................................................................................. 28 1 17 0.06 1 1 0 0 0
............................................................................................................................TAAACTACTTTATCATCACTAATGGTATT.................................................................................................. 29 2 17 0.06 1 1 0 0 0
.............................................................................................................................AAACTACTTTATCATCACTAATGGTATT.................................................................................................. 28 1 17 0.06 1 1 0 0 0
.....................TCCACGCGCTAACCTGCTTGTTCAGGCTT......................................................................................................................................................................................................... 29 1 17 0.06 1 1 0 0 0
.............................................................................................................................................................GAGCCTCTTATATGGCCATCGGGAATAC.................................................................. 28 0 17 0.06 1 0 0 1 0
..............GAGCCATTCCACGCGCTAACCTACTTGTC................................................................................................................................................................................................................ 29 1 17 0.06 1 1 0 0 0
.............TGAGCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 29 1 17 0.06 1 1 0 0 0
............................................................................................................................................................TGAGCCTCTTATATGGCCATCGGGAAT.................................................................... 27 0 17 0.06 1 1 0 0 0
............................................................................................................................................CACTAATGGTATTTTTTGAG........................................................................................... 20 0 17 0.06 1 1 0 0 0
..............TTGCCATTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 28 2 17 0.06 1 0 1 0 0
.........................CGCGCTAACCTACTTGTTCAGGCTT......................................................................................................................................................................................................... 25 0 18 0.06 1 1 0 0 0
.........................................................................................................TGGAGATTCTAGCTAATCA............................................................................................................................... 19 3 18 0.06 1 1 0 0 0
..............GAGCCATTCCACGCGCTAACCTAC..................................................................................................................................................................................................................... 24 0 18 0.06 1 1 0 0 0
..........................GCGCTAACCTACTTGTTCAGGCTTG........................................................................................................................................................................................................ 25 0 18 0.06 1 1 0 0 0
....................TTCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 22 0 18 0.06 1 0 1 0 0
...............AGCCATTCCACGCGCTAACCTACTT................................................................................................................................................................................................................... 25 0 18 0.06 1 0 1 0 0
..........CCGGGAACCATTCCACGCGCTAACCT....................................................................................................................................................................................................................... 26 1 18 0.06 1 1 0 0 0
...............AGCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 24 0 18 0.06 1 1 0 0 0
...........CGGGAGCCATTCCACGCGCTAACCTGCT.................................................................................................................................................................................................................... 28 1 18 0.06 1 0 1 0 0
..........CCGGGAGCCATTCCACGCGCTAACCTAC..................................................................................................................................................................................................................... 28 0 18 0.06 1 1 0 0 0
.................CCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0
.................................................................................................................................................................CTCTTATATGGCCATCGGGAATAC.................................................................. 24 0 18 0.06 1 0 1 0 0
.......................................................................................................................AATCGGAAACTACTTTATCATCACTAA......................................................................................................... 27 1 18 0.06 1 1 0 0 0
.........................................................................................................................TCGGAAACTACTTTATCATCACTAAT........................................................................................................ 26 1 18 0.06 1 1 0 0 0
...........CGGGAGCCATTCCACGCGCTAACC........................................................................................................................................................................................................................ 24 0 18 0.06 1 0 1 0 0
...........................CGCTAACCTACTTGTTCAGGCTTGCT...................................................................................................................................................................................................... 26 0 18 0.06 1 0 1 0 0
..............GAGCCATTCCACGCGCTAACCTACTTT.................................................................................................................................................................................................................. 27 1 18 0.06 1 1 0 0 0
................................................................................................................................................................CCTCTTATATGGCCATCGGGAATA................................................................... 24 0 18 0.06 1 1 0 0 0
...........CGGGAGCCGTTCCACGCGCTAACCT....................................................................................................................................................................................................................... 25 1 18 0.06 1 0 1 0 0
...........CGGGAGCCATTCCACGAGCTAACCTACT.................................................................................................................................................................................................................... 28 1 18 0.06 1 1 0 0 0
...............AGCCATTCCACGCGCTAACCTACTTTT................................................................................................................................................................................................................. 27 1 18 0.06 1 1 0 0 0
...................................................................................................................GGCTAATCGGAAACTACTTTAT.................................................................................................................. 22 0 18 0.06 1 0 1 0 0
.............GGAGCCATTCCACGCGCTAACCTACT.................................................................................................................................................................................................................... 26 0 18 0.06 1 1 0 0 0
...............................................................................................................................................................GCCTCTTATATGGCCATCGGGAAT.................................................................... 24 0 18 0.06 1 0 1 0 0
...........................................................................................................................................................................................................CAACGGTAAGCTCCGCACGTGCT......................... 23 1 18 0.06 1 1 0 0 0
.....................TCCACGCGCTAACCTACTTGT................................................................................................................................................................................................................. 21 0 18 0.06 1 1 0 0 0
..........................GCGCTAACCTACTTGTTCAGGCTT......................................................................................................................................................................................................... 24 0 18 0.06 1 1 0 0 0
..........CCGGGAGCCATTCCACGCGCTAAC......................................................................................................................................................................................................................... 24 0 18 0.06 1 1 0 0 0
..........................................................................................................................................................................................................ACAACGGTAAGCTCCGCACGT............................ 21 1 18 0.06 1 0 1 0 0
............GGGAGCCATTCCACGCGCTAACCTAC..................................................................................................................................................................................................................... 26 0 18 0.06 1 1 0 0 0
.............................................................................................................................AAACTACTTTATCCTCACT........................................................................................................... 19 0 18 0.06 1 0 1 0 0
...................ATTCCACGCGCTAACCTACTTGTT................................................................................................................................................................................................................ 24 0 18 0.06 1 0 1 0 0
.......................................................................................................................AATCGGAAACTACTTTATCATCACT........................................................................................................... 25 1 18 0.06 1 1 0 0 0
.................................................................................................................CTGGCTAATCGGAAACTACTTTAT.................................................................................................................. 24 0 18 0.06 1 0 1 0 0
....................................................................................................................................................................TTATATGGCCATCGGGAATAC.................................................................. 21 0 19 0.05 1 0 1 0 0
...................................................................................................................................................................CTTATATGGCCATCGGGAATACG................................................................. 23 0 19 0.05 1 0 1 0 0
..............GAGCCATTCCACGCGCTAACCTA...................................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0
................GCCATTCCACTCGCTAACCTACTTGT................................................................................................................................................................................................................. 26 1 19 0.05 1 0 1 0 0
...................................................................................................................GGCTAATCGGGAACTACTTTATCAT............................................................................................................... 25 2 20 0.05 1 1 0 0 0
..............................................................................................................................................................................CTCGGGAATACGGGGCAA........................................................... 18 2 20 0.05 1 0 0 1 0
..............GAGCCATTCCACGCGCTAACC........................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004711:5947-6197 + dwi_1896 AGGCGG-ACCAGGCCCTCGGTAAGGTGCGCGATTGGATGAACAAGTCCGAACGACCGCCTAAACCAACATTGTGGGGCGAGAGCCCAAAAATTAGAGCTTTGTGGGATCTCTAAGACCGATTAGCCTTTGATGAAATAGGA---GTGATTACCATAAAAAACTCGGAGAATATACCGGTAGCCCTTATGCCCCGCTTACTGGTAGATGCTGCCATTCGAGGCGTGCACGACTCTTTATCCGGAGGTCACTTCAGT
droMoj3 scaffold_6680:23398171-23398185 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGTCATACAGGC
droAna3 scaffold_12285:447-461 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGTCATACTGGC
droBip1 scf7180000392004:3880-3908 + A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATTCAATACAAGGTGGTCATACAGGC
droKik1 scf7180000302423:4837-5085 + AACAAGGACCCAAGTCTCGCATTGATCCGGCAGTGGCTGGAAAAAGGAGAGCGACCAAGTAAATCGACTACATGGAGTGATAGCCCCGAAGTAAAAGCGTATTGGCATCTGTTTGAGCATCTTTACATGGACAAGGGGCTGTTGATGATTAAAACCAAATCTGCGGACCTAGCCCTGG------TGGTACCCCGCTCTCTTCAGGAAGACGCCATCCGCAGCGCCCATAACTCTACGATCGGTGGACACTTCGGG
droFic1 scf7180000453074:11782-12023 + GG-----ACCCAACTCTAGCGTTGGTCCTTCA-TGGTTGGAAAATGGAAAACGAGCCCTCAAATCTCAGATTTGGGGCGAAAGCCCGGACATCAAAGCTTACTGGCATTCATTCGAAAACCTTCACTTGGAAGACGTCGTGGTAAAAACCCGAATCAAGACTGGTGA-GAAATGGCAC------TAGTACCGCAATAATTGCGGGAGGAAACCCTAGGCCACGCTCACAATGCGCCTACTGGAGACCACTTTGGA
droEle1 scf7180000490071:43297-43504 + A-------TACCACTTTGGCGCTCATGTTACCTCGGAACCAAAAAGGACAAAGGCCACCAAAATCCACGAGATGGGGCGAAATCCTCGAGAAAAAAGCCTACTGGCATTTATTCGATCGCCTTTTCCTAAA----------CCAATGATTA------------------------TGG------TAGCACCGCTTTCTCTTAAGGGTTAGACCATGCGCATCGCTCATAACTCTACTACCGTAGGACACTTTGAA
droRho1 scf7180000771710:8456-8697 - A-------TCCCACTTTGTCGTTGATCCTGCAGTGGTTAAAAACAGGAGAACGACCAACTAAATCCACAACATGGAGTGAGAGCCCCGAGCCAAAAGCGTATTGGCACTTGTTCGAACACTTTTTCGTGAAAAGGCGTCTTCTAATGATTAAAACCAAAACAGCGGACGAAGCCTTGG------TAGTGCCTCGCTCTCTTCAGGAAGAAGCTTTGCGCAGCGCTCACAACTCTACCACCGGCGGACACCTCGGA
droBia1 scf7180000302127:49615-49838 - AGAAAG-ATCCCA--TTGTCATTGGTCCTGCAGTGGGTAAAAACAGGAGAACGACTAACTAAATCTACCACATGGAGTGAAAGCCCCGAGACAAAAGCCTATTGGCACTTGTTCCAACACTTATTCATGGAAAAGGGTATTCTAATGA----------------------AGCCTTGG------TAGTACCTTGCTCTCTTTAGAAAGAAGCTCTGCGCAGTGATCACAAATCTACCAATCACGGATATTTCGGA
droTak1 scf7180000415096:13459-13700 + A-------TCCCACTTTGTCGTTGGTCTTGCAGTGGCTAAAAACAGGAGAACGACCACCGAAACCCACAACATGGAGTGAGAGCCCCGAGACAAAAGCGTATTGGCACTTGTTCGAACACCTTTTTATGGAAAGGGGTCTTCTAATGATTAAAACCAAAACAGCAGACGAAGCCTTGG------TAGTACCTCGCTCTCTTCAGGAAGAAGCTCTGCGCAGCGCTCACAACTCTACCACCGGCGGACACTTCGGA
droSec2 scaffold_1908:1081-1109 + A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATCCAATAAAAGGAGGTCACACAGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AGGCGG-ACCAGGCCCTCGGTAAGGTGCGCGATTGGATGAACAAGTCCGAACGACCGCCTAAACCAACATTGTGGGGCGAGAGCCCAAAAATTAGAGCTTTGTGGGATCTCTAAGACCGATTAGCCTTTGATGAAATAGGA---GTGATTACCATAAAAAACTCGGAGAATATACCGGTAGCCCTTATGCCCCGCTTACTGGTAGATGCTGCCATTCGAGGCGTGCACGACTCTTTATCCGGAGGTCACTTCAGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................TGGATGAACAAGTCCGAACGACCGCC....................................................................................................................................................................................................26151.0716016000
.................................TGGATGAACAAGTCCGAACGACCG......................................................................................................................................................................................................24150.8713013000
.................................TGGATGAACAAGTCCGAACGACC.......................................................................................................................................................................................................23170.35606000
..........................................................................................................................................................................TATACCGGTAGCCCTTATGCCCCGCT...........................................................26140.21302010
............................................................................................................................................................................TACCGGTAGCCCTTATGCCCCGC............................................................23150.13202000
............................................................................................................................................................................TACCGGTAGCCCTTATGCCCCGCT...........................................................24150.13200020
.................................TGGATGAACAAGTCCGAACGACCGC.....................................................................................................................................................................................................25150.13201100
...........................CGCGATTGGATGAACAAGTCCGAACG..........................................................................................................................................................................................................26180.11202000
..GCGG-ACCAGGCCCTCGGTAAGGTGCGC.................................................................................................................................................................................................................................27110.09101000
.....G-ACCAGGCCCTCGGTAAGGTGCGC.................................................................................................................................................................................................................................24120.08100010
.......................................................................................................................................................................................................TGGTAGATGCTGCCATTCGAGGCGTATT............................28120.08100010
.GGCGG-ACCAGGCCCTCGGTAAGGTG....................................................................................................................................................................................................................................25120.08101000
AGGCGG-ACCAGGCCCTCGGTAAG.......................................................................................................................................................................................................................................23130.08101000
...CGG-ACCAGGCCCTCGGTAAGGT.....................................................................................................................................................................................................................................22130.08101000
AGGCGG-ACCAGGCCCTCGGTA.........................................................................................................................................................................................................................................21140.07101000
.................................................................................................................................................................................................................TGCCATTCGAGGCGTGCACGACTCT.....................25140.07101000
.......................................................................................................................................................................................................TGGTAGATGCTGCCATTCGAGGC.................................23140.07100010
.................................................................................................................................................................................................................TGCCATTCGAGGCGTGCACGACTC......................24140.07100010
...................................................................................................................................................ATTACCATAAAAAACTCGGAGAATA...................................................................................25140.07101000
AGGCGG-ACCAGGCCCTCGGTAA........................................................................................................................................................................................................................................22140.07101000
.................................................................................................................................................................................................................TGCCATTCGAGGCGTGCACGACT.......................23140.07100010
..............................GATTGGATGAACAAGTCCGAACGACCGC.....................................................................................................................................................................................................28150.07101000
.................................TGGATGAACAAGTCCGAACGACCGCCT...................................................................................................................................................................................................27150.07101000
..............................GATTGGATGAACAAGTCCGAACGACCG......................................................................................................................................................................................................27150.07101000
.....................................TGAACAAGTCCGAACGACCGCCT...................................................................................................................................................................................................23150.07101000
.................................TGGATGAACAAGTCCGAACGACCGCCTA..................................................................................................................................................................................................28150.07101000
................................................................................................................................TGATGAAATAGGA---GTGATTACCAT....................................................................................................24160.06101000
......................AGGTGCGCGATTGGATGAACAAG..................................................................................................................................................................................................................23160.06100010
....................TAAGGTGCGCGATTGGATGAACAAG..................................................................................................................................................................................................................25160.06100010
.......................................................................................................................................................................GAATATACCGGTAGCCCTTATGCCC...............................................................25160.06101000
.....................AAGGTGCGCGATTGGATGAACAAGT.................................................................................................................................................................................................................25160.06100010
..........................................................................................................................................................................TATACCGGTAGCCCTTATGCC................................................................21170.06101000
.................CGGTAAGGTGCGCGATTGGATGAACA....................................................................................................................................................................................................................26170.06101000
...................GTAAGGTGCGCGATTGGATGAACA....................................................................................................................................................................................................................24170.06101000
.................CGGTAAGGTGCGCGATTGGATGA.......................................................................................................................................................................................................................23180.06101000
.........................TGCGCGATTGGATGAACAAGTCCGAA............................................................................................................................................................................................................26180.06101000
............GCCCTCGGTAAGGTGCGCGATTGG...........................................................................................................................................................................................................................24180.06101000
...........................CGCGATTGGATGAACAAGTCCGAA............................................................................................................................................................................................................24180.06100010
.................................TGGATGAACAAGTCCGAACGAC........................................................................................................................................................................................................22190.05101000
.............CCCTCGGTAAGGTGCGCGATTGG...........................................................................................................................................................................................................................23190.05101000
..............................GATTGGATGAACAAGTCCGAACG..........................................................................................................................................................................................................23190.05101000
..................................................................................................................GACCGATTAGCCTTTGATGAAA.......................................................................................................................22190.05101000
................................................................................................................................TGATGAAATAGGA---GTGAA..........................................................................................................18200.05101000
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGTCATACAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGTCATACTGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATTCAATACAAGGTGGTCATACAGGCSizeHit CountTotal NormTotal
No Reads
droKik1
AACAAGGACCCAAGTCTCGCATTGATCCGGCAGTGGCTGGAAAAAGGAGAGCGACCAAGTAAATCGACTACATGGAGTGATAGCCCCGAAGTAAAAGCGTATTGGCATCTGTTTGAGCATCTTTACATGGACAAGGGGCTGTTGATGATTAAAACCAAATCTGCGGACCTAGCCCTGG------TGGTACCCCGCTCTCTTCAGGAAGACGCCATCCGCAGCGCCCATAACTCTACGATCGGTGGACACTTCGGGSizeHit CountTotal NormTotal
No Reads
droFic1
GG-----ACCCAACTCTAGCGTTGGTCCTTCA-TGGTTGGAAAATGGAAAACGAGCCCTCAAATCTCAGATTTGGGGCGAAAGCCCGGACATCAAAGCTTACTGGCATTCATTCGAAAACCTTCACTTGGAAGACGTCGTGGTAAAAACCCGAATCAAGACTGGTGA-GAAATGGCAC------TAGTACCGCAATAATTGCGGGAGGAAACCCTAGGCCACGCTCACAATGCGCCTACTGGAGACCACTTTGGASizeHit CountTotal NormTotal
No Reads
droEle1
A-------TACCACTTTGGCGCTCATGTTACCTCGGAACCAAAAAGGACAAAGGCCACCAAAATCCACGAGATGGGGCGAAATCCTCGAGAAAAAAGCCTACTGGCATTTATTCGATCGCCTTTTCCTAAA----------CCAATGATTA------------------------TGG------TAGCACCGCTTTCTCTTAAGGGTTAGACCATGCGCATCGCTCATAACTCTACTACCGTAGGACACTTTGAASizeHit CountTotal NormTotal
No Reads
droRho1
A-------TCCCACTTTGTCGTTGATCCTGCAGTGGTTAAAAACAGGAGAACGACCAACTAAATCCACAACATGGAGTGAGAGCCCCGAGCCAAAAGCGTATTGGCACTTGTTCGAACACTTTTTCGTGAAAAGGCGTCTTCTAATGATTAAAACCAAAACAGCGGACGAAGCCTTGG------TAGTGCCTCGCTCTCTTCAGGAAGAAGCTTTGCGCAGCGCTCACAACTCTACCACCGGCGGACACCTCGGASizeHit CountTotal NormTotal
No Reads
droBia1
AGAAAG-ATCCCA--TTGTCATTGGTCCTGCAGTGGGTAAAAACAGGAGAACGACTAACTAAATCTACCACATGGAGTGAAAGCCCCGAGACAAAAGCCTATTGGCACTTGTTCCAACACTTATTCATGGAAAAGGGTATTCTAATGA----------------------AGCCTTGG------TAGTACCTTGCTCTCTTTAGAAAGAAGCTCTGCGCAGTGATCACAAATCTACCAATCACGGATATTTCGGASizeHit CountTotal NormTotal
No Reads
droTak1
A-------TCCCACTTTGTCGTTGGTCTTGCAGTGGCTAAAAACAGGAGAACGACCACCGAAACCCACAACATGGAGTGAGAGCCCCGAGACAAAAGCGTATTGGCACTTGTTCGAACACCTTTTTATGGAAAGGGGTCTTCTAATGATTAAAACCAAAACAGCAGACGAAGCCTTGG------TAGTACCTCGCTCTCTTCAGGAAGAAGCTCTGCGCAGCGCTCACAACTCTACCACCGGCGGACACTTCGGASizeHit CountTotal NormTotal
No Reads
droSec2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATCCAATAAAAGGAGGTCACACAGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads

Generated: 05/18/2015 at 02:55 AM