ID:

dwi_1829

 Coordinate:

scf2_1100000004590:3150476-3150626 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.8 -16.5 -16.5 -16.2

Flybase annnotation

CDS [Dwil\GK16158-cds]; exon [dwil_GLEANR_16543:4]; intron [Dwil\GK16158-in]

No Repeatable elements found

mature
star
  1. scf2_1100000001658:217-242 -
  2. scf2_1100000011436:1056-1081 -
  3. scf2_1100000008908:167-192 -
  4. scf2_1100000000830:371-396 -
  5. scf2_1100000000909:1256-1281 -
  6. scf2_1100000004585:8311298-8311323 -
  7. dwi_1829  scf2_1100000004590:3150479-3150504 -
  8. scf2_1100000004603:8536-8561 -
  9. scf2_1100000004669:5685-5710 -
  10. scf2_1100000004722:33120-33145 -
  11. scf2_1100000007104:1049-1074 -
  12. scf2_1100000004854:359453-359478 -
  13. scf2_1100000004943:3765253-3765278 -
  14. scf2_1100000004898:25663-25688 -
  15. scf2_1100000004904:19323-19348 -
  16. scf2_1100000004909:1120337-1120362 -
  17. scf2_1100000004912:71340-71365 -
  18. scf2_1100000004932:85958-85983 -
  19. scf2_1100000004958:2551546-2551571 -
  20. scf2_1100000004961:2791258-2791283 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGCGAGGACTCCGAACGGGCACTCGCCAATCGCGTGAATACACGTTGCAACTATAATCACCTCAATTCACCATTTGCAACGCGCACTGTCAGCGAGCTGGACGCTCTGTTAAATGAGCACAACGAATTGTTGAAATTATTCAAATCACATATGCATAAGCTACAAAGTGACAATCACGCTATTTTCATCAATCCTGATAGAACACCAGCTGGAGGGCATATACGTCGATTCAACGCACCTGTTGTTGACG
**********************************************************************************.......((((((...((..((((.(((.......(((..........(((((....)))))........))).......))).)))).))....))))...............))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 M020
head
..................................................................................CGCACTGTCAGCGAGCTGGA..................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
.............................ATCGCGTGAATACACGTTGCACCTA..................................................................................................................................................................................................... 25 1 20 0.15 3 3 0 0 0
................................................................................................................................................................................................................................GTCGATTCAACGCACCTGTTGTTGA.. 25 0 20 0.10 2 2 0 0 0
..............................................................................................................................................................................................AATCCTGATAGAACACCAGCTGG...................................... 23 0 20 0.10 2 0 0 0 2
.......................................................................................................................................................................................TTTCATCAATCCTGATAGAACACCAG.......................................... 26 0 20 0.10 2 2 0 0 0
.......................................................................................................................................................................................TTTCATCAATCCTGATAGAACACCAGCT........................................ 28 0 20 0.10 2 0 0 0 2
........................................................................................................................................................................................................................................ATCGGACCTGTTGTTGAC. 18 2 20 0.10 2 0 0 0 2
.......GACTCCGAACGGGCACTCGCCAATCG.......................................................................................................................................................................................................................... 26 0 18 0.06 1 1 0 0 0
..........TCCGAACGGGCACTCGCCAATCGCG........................................................................................................................................................................................................................ 25 0 19 0.05 1 1 0 0 0
..........TCCGAACGGGCACTCGCCAATCG.......................................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0
....................CACTCGCCAATCGCGTGAATACACGTTG........................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
.......................................................AATCACCTCAATTCACCATTTGCAACG......................................................................................................................................................................... 27 0 20 0.05 1 0 0 1 0
......GGACTCCGAACGGGCACTCGCCAAT............................................................................................................................................................................................................................ 25 0 20 0.05 1 0 0 1 0
..............................................TGCAACTATAATCACCTCAATTCACCATT................................................................................................................................................................................ 29 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................................................ACCAGCTGGAGGGCATATACGTCGATC.................... 27 1 20 0.05 1 0 0 1 0
............................................................................................................................................................................................................ACCAGCTGGAGGGCATATACGTC........................ 23 0 20 0.05 1 0 0 1 0
............................................................................................................................................................................AATCACGCTATTTTCATCAATCCTGA..................................................... 26 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................ATAAGCTACAAAGTGACAATCACGC....................................................................... 25 0 20 0.05 1 0 0 1 0
......................................ATACACGTTGCAACTATAAAA................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 1 0
.............................................................................................................................AATTGTTGAAATTATTCAAAT......................................................................................................... 21 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................TTTCATCAATCCTGATAGAACACCAGC......................................... 27 0 20 0.05 1 0 0 1 0
.......................................................................................................................................ATTATTCAAATCACATATGCATAAGC.......................................................................................... 26 0 20 0.05 1 1 0 0 0
.....................ACTCGCCAATCGCGTGAATACACGTT............................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
............CGAACGGGCACTCGCCAATCGCGTGAA.................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................CAATCCTGATAGAACACCAGCTGGAG.................................... 26 0 20 0.05 1 1 0 0 0
.........................................................................................................TCTGTTAAATGAGCACAACGAATTGT........................................................................................................................ 26 0 20 0.05 1 1 0 0 0
..........................................................................................................CTGTTAAATGAGCACAACGAATTGT........................................................................................................................ 25 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................GGCATATACGTCGATTCAACG............... 21 0 20 0.05 1 0 0 0 1
.........................................................................................................................................................................GACAATCACGCTATTTTCATCAATCC........................................................ 26 0 20 0.05 1 1 0 0 0
..............................................TGCAACTATAATCACCTCAATTCACCA.................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0
.GGCGAGGACTCCGAACGGGCACTCG................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
.......GACTCCGAACGGGCACTCGCCAAT............................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................AGGGCATATACGTCGATTCAACG............... 23 0 20 0.05 1 0 0 1 0
....................................................................................................................................................................................TATTTTCATCAGTCCTGATAGAACA.............................................. 25 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................TGATAGAACACCAGCTGGAGGGCA................................ 24 0 20 0.05 1 1 0 0 0
...............................................GCAACTATAATCACCTCAATTCACCATT................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0
.......................................................................................TGTCAGCGAGCTGGACGCTCTGTTAAAA........................................................................................................................................ 28 1 20 0.05 1 1 0 0 0
..............................................TGCAACTATAAGCACCTCAATTCACCATT................................................................................................................................................................................ 29 1 20 0.05 1 1 0 0 0
...................................TGAATACACGTTGCAACTATAATCACCT............................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0
......................................................................................................................................................TATGCATAAGCTACAAAGTGACAATCA.......................................................................... 27 0 20 0.05 1 0 0 1 0
.....................................................................................................................................AAATTATTCAAATCACATATGCAT.............................................................................................. 24 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................TACGTCGATTCAACGCACCTG......... 21 0 20 0.05 1 1 0 0 0
...CGAGGACTCCGAACGGGCACT................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

ACCGCTCCTGAGGCTTGCCCGTGAGCGGTTAGCGCACTTATGTGCAACGTTGATATTAGTGGAGTTAAGTGGTAAACGTTGCGCGTGACAGTCGCTCGACCTGCGAGACAATTTACTCGTGTTGCTTAACAACTTTAATAAGTTTAGTGTATACGTATTCGATGTTTCACTGTTAGTGCGATAAAAGTAGTTAGGACTATCTTGTGGTCGACCTCCCGTATATGCAGCTAAGTTGCGTGGACAACAACTGC
*****************************************************.......((((((...((..((((.(((.......(((..........(((((....)))))........))).......))).)))).))....))))...............))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
......................................................................GGTAAACGTTGCGCGTGACAGTCGCT........................................................................................................................................................... 26 0 1 4.00 4 3 1 0 0 0
...................................................................AGTGGTAAACGTTGCGCGTGACAGT............................................................................................................................................................... 25 0 1 3.00 3 2 1 0 0 0
.................................................................TAAGTGGTAAACGTTGCGCGTGACAGT............................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.......................................ATGTGCAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 26 0 20 1.85 37 3 32 2 0 0
......................................TATGTGCAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 27 0 20 1.25 25 2 20 1 0 2
......................................................................................................................................................................TCACTGTTAGTGCGATAAAAGTAGT............................................................ 25 0 20 1.20 24 2 16 2 3 1
...............................................................................................................................................................................................................................GCAGCTAAGTTGCGTGGACAACAACT.. 26 0 20 1.10 22 14 7 1 0 0
........................................TGTGCAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 25 0 20 1.10 22 3 17 2 0 0
...GCTCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 26 0 20 1.05 21 2 18 1 0 0
............................................................GGAGTTAAGTGGTAAACGTTGCGCGT..................................................................................................................................................................... 26 0 20 1.00 20 8 12 0 0 0
.................................................................GAAGTGGTAAACGTTGCGCGTGACAGT............................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
.....................................................................TGGTAAACGTTGCGCGTGACAGTCGC............................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.................................................................TAAGTGGTAAACGTTGCGCGTG.................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
......................................................................GGTGAACGTTGCGCGTGACAGTCGCT........................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.......................................................................GTAAACGTTGCGCGTGACAGTCGCT........................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................GTGCAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 24 0 20 0.70 14 2 11 1 0 0
................................................................................................................................................................................................................CGACCTCCCGTATATGCAGCTAAGT.................. 25 0 20 0.70 14 14 0 0 0 0
................................................................................................CGACCTGCGAGACAATTTACTCGTGT................................................................................................................................. 26 0 20 0.60 12 5 6 0 0 1
.............................................................................................................................................................................................................GGTCGACCTCCCGTATATGCAGCTAAGT.................. 28 0 20 0.45 9 9 0 0 0 0
....................................................................................................................................................GCATACGTATTCGATGTTTCACTGT.............................................................................. 25 1 20 0.40 8 3 5 0 0 0
............................................................................................................................................................ATTCGATGTTTCACTGTTAGTGCGAT..................................................................... 26 0 20 0.35 7 5 2 0 0 0
.................................GCACTTATGTGCAACGTTGATATTAGT............................................................................................................................................................................................... 27 0 20 0.35 7 1 6 0 0 0
........................................................................................................................................................ACGTATTCGATGTTTCACTGTTAGT.......................................................................... 25 0 20 0.30 6 0 6 0 0 0
......................................TATGTGCAACGTGGATATTAGTGGAGT.......................................................................................................................................................................................... 27 1 20 0.30 6 1 5 0 0 0
....................................................................................................................................................GCATACGTATTCGATGTTTCACTGTT............................................................................. 26 1 20 0.30 6 0 6 0 0 0
......................................................................................................................................................................TCACTGTTAGTGCGATAAAAGTAGTT........................................................... 26 0 20 0.30 6 0 5 1 0 0
....................................................................................................................................................GTATACGTATTCGATGTTTCACTGT.............................................................................. 25 0 20 0.30 6 3 3 0 0 0
......................................................ATTAGTGGAGTTAAGTGGTAAACGT............................................................................................................................................................................ 25 0 20 0.30 6 3 3 0 0 0
...........................................................................................................................................................................GTTAGTGCGATAAAAGTAGTTAGGAC...................................................... 26 0 20 0.30 6 1 4 1 0 0
.....TCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 24 0 20 0.25 5 2 3 0 0 0
............GCTTGCCCGTGAGCGGTTAGCGCACT..................................................................................................................................................................................................................... 26 0 20 0.25 5 3 2 0 0 0
..............TTGCCCGTGAGCGGTTAGCGCACTT.................................................................................................................................................................................................................... 25 0 20 0.25 5 4 1 0 0 0
...........................................................................................................................................AAGTTTAGTGTATACGTATTCGATGT...................................................................................... 26 0 20 0.25 5 5 0 0 0 0
...................................................................AGGCGTAACCGTTGCGCGTGA................................................................................................................................................................... 21 3 4 0.25 1 0 0 1 0 0
.............................................................................................................................................GTTTAGTGTATACGTATTCGATGTTT.................................................................................... 26 0 20 0.25 5 1 4 0 0 0
................................................................................................................................................................................................................CGACCTCCCGTATATGCAGCTAAG................... 24 0 20 0.20 4 4 0 0 0 0
..............................................................................................................................................................................AGTGCGATAAAAGTAGTTAGGACTAT................................................... 26 0 20 0.20 4 1 2 0 0 1
...............TGCCCGTGAGCGGTTAGCGCACTTAT.................................................................................................................................................................................................................. 26 0 20 0.20 4 2 1 1 0 0
.............................................................................................................................................GTTTAGTGTATACGTATTCGATGT...................................................................................... 24 0 20 0.20 4 0 4 0 0 0
................GCCCGTGAGCGGTTAGCGCACTT.................................................................................................................................................................................................................... 23 0 20 0.20 4 1 0 0 3 0
.................................GCACTTATGTGCAACGTTGATATTAG................................................................................................................................................................................................ 26 0 20 0.20 4 0 4 0 0 0
......................GAGCGGTTAGCGCACTTATGTGCAACGT......................................................................................................................................................................................................... 28 0 20 0.20 4 4 0 0 0 0
......CCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 23 0 20 0.20 4 3 1 0 0 0
............................................................................................................................................................................................AGTTAGGACTATCTTGTGGTCGACCT..................................... 26 0 20 0.20 4 1 3 0 0 0
........................................................................................................................................................................................AAGTAGTTAGGACTATCTTGTGGT........................................... 24 0 20 0.15 3 1 2 0 0 0
...........................................................................................................................................................................GTTAGTGCGATAAAAGTAGTTAGGACT..................................................... 27 0 20 0.15 3 1 2 0 0 0
............GCTTGCCCGTGAGCGGTTAGCGCAC...................................................................................................................................................................................................................... 25 0 20 0.15 3 2 1 0 0 0
...............................................................................................................................................................................GTGCGATAAAAGTAGTTAGGACTATCT................................................. 27 0 20 0.15 3 0 3 0 0 0
...............................................................................................................................................TTAGTGTATACGTATTCGATGTTT.................................................................................... 24 0 20 0.15 3 1 2 0 0 0
............................................................GGAGTTAAGTGGTAAACGTTGCGC....................................................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
................................................................................................................................ACAACTTTAATAAGTTTAGTGTATACGT............................................................................................... 28 0 20 0.15 3 3 0 0 0 0
...............................................................................................................................................................................GTGCGATAAAAGTAGTTAGGACTAT................................................... 25 0 20 0.15 3 3 0 0 0 0
......................................................................................................GCGAGACAATTTACTCGTGTTGCTT............................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0
.......................................................................................................................................................................................AAAGTAGTTAGGACTATCTTGTGGT........................................... 25 0 20 0.15 3 0 3 0 0 0
.............................................................................................................................................................................TAGTGCGATAAAAGTAGTTAGGACTAT................................................... 27 0 20 0.15 3 0 3 0 0 0
..............................AGCGCACTTATGTGCAACGTTGATAT................................................................................................................................................................................................... 26 0 20 0.15 3 0 3 0 0 0
.......................................................................................ACAGTCGCTCGACCTGCGAGACAAT........................................................................................................................................... 25 0 20 0.15 3 2 1 0 0 0
ACCGCTCCTGAGGCTTGCCCGT..................................................................................................................................................................................................................................... 22 0 20 0.15 3 2 1 0 0 0
..........................................................................................................GACAATTTACTCGTGTTGCTTAACAACT..................................................................................................................... 28 0 20 0.15 3 3 0 0 0 0
.............................TAGCGCACTTATGTGCAACGTGGATAT................................................................................................................................................................................................... 27 1 20 0.15 3 1 2 0 0 0
.......................................ATGTGCAACGTTGATATTAGTGGAG........................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0
...............TGCCCGTGAGCGGTTAGCGCACTT.................................................................................................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
....................................................................................................................................................................................................................CTCCCGTATATGCAGCTAAGTTGCGT............. 26 0 20 0.10 2 2 0 0 0 0
................................................................................................................TTACTCGTGTTGCTTAACAACTTTAAT................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................TGCGATAAAAGTAGTTAGGACTAT................................................... 24 0 20 0.10 2 1 1 0 0 0
...........................................................................................................................................................................GTTAGTGCGATAAAAGTAGTTAGGA....................................................... 25 0 20 0.10 2 0 2 0 0 0
..............................................................................................................................................................TCGATGTTTCACTGTTAGTGCGAT..................................................................... 24 0 20 0.10 2 0 2 0 0 0
................................................................................................................................................................................TGCGATAAAAGTAGTTAGGACTATCT................................................. 26 0 20 0.10 2 1 1 0 0 0
.............................................................................................................................................................................................................GGTCGACCTCCCGTATATGCAGCT...................... 24 0 20 0.10 2 2 0 0 0 0
.CCGCTCCTGAGGCTTGCCCGT..................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0
....CTCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 25 0 20 0.10 2 1 1 0 0 0
.....................................................................................................................................TTTAATAAGTTTAGTGCATACGTAT............................................................................................. 25 1 20 0.10 2 0 2 0 0 0
.............CTTGCCCGTGAGCGGTTAGCGCACT..................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
...............................................................................................TCGACCTGCGAGACAATTTACTCGTGT................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
...............................GCGCACTTATGTGCAACGTTGATAT................................................................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
............................................................................................CGCTCGACCTGCGAGACAATTTACTCGT................................................................................................................................... 28 0 20 0.10 2 2 0 0 0 0
...............................................................................................TCGACCTGCGAGACAATTTACTCGT................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
.........................................GTGCAACGTGGATATTAGTGGAGT.......................................................................................................................................................................................... 24 1 20 0.10 2 1 1 0 0 0
..........................................................................................................................................................................................................TGTGGTCGACCTCCCGTATATGCAGC....................... 26 0 20 0.10 2 2 0 0 0 0
.............................TAGCGCACTTATGTGCAACGTTGATAT................................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
...............TGCCCGTGAGCGGTTAGCGCACTTATGT................................................................................................................................................................................................................ 28 0 20 0.10 2 2 0 0 0 0
.............................TAGCGCACTTATGTGCAACGTGGATATT.................................................................................................................................................................................................. 28 1 20 0.10 2 0 2 0 0 0
.....................................................................................................................................................................................TAAAAGTAGTTAGGACTATCTTGTGGT........................................... 27 0 20 0.10 2 0 2 0 0 0
.....TCCTGAGGCTTGCCCGTGAGCGGTT............................................................................................................................................................................................................................. 25 0 20 0.10 2 0 2 0 0 0
...............................................................................................................................................................................................................TCGACCTCCCGTATATGCAGCTAAGT.................. 26 0 20 0.10 2 0 2 0 0 0
.............................................................................................................................................................................................................................ATGCAGCTAAGTTGCGTGGACAACA..... 25 0 20 0.10 2 0 2 0 0 0
.........................................................................................................................................................CGTATTCGATGTTTCACTGTTAGT.......................................................................... 24 0 20 0.10 2 1 1 0 0 0
.....................................................TATTAGTGGAGTTAAGTGGTAAACGT............................................................................................................................................................................ 26 0 20 0.10 2 1 1 0 0 0
............................ATAGCGCACTTATGTGCAACGTTGATAT................................................................................................................................................................................................... 28 1 20 0.10 2 2 0 0 0 0
...........................................................................................................ACAATTTACTCGTGTTGCTTAACAACT..................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0
...................................ACTTATGTGCAACGTTGATATTAGT............................................................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
............................................................................................CGCTCGACCTGCGAGACAATTTACT...................................................................................................................................... 25 0 20 0.10 2 1 1 0 0 0
..............TCGGCCGTGAGGGGTTAG........................................................................................................................................................................................................................... 18 3 20 0.10 2 2 0 0 0 0
...........................................................................................TCGCTCGACCTGCGAGACAATTTACT...................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.................................................................................................................................................................................GCGATAAAAGTAGTTAGGACTATCTTGT.............................................. 28 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................ATACGTATTCGATGTTTCACTGTT............................................................................. 24 0 20 0.10 2 1 1 0 0 0
.............................TAGCGCACTTATGTGCAACGTTGATATT.................................................................................................................................................................................................. 28 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................AGGACTATCTTGTGGTCGACCTCCCGT................................ 27 0 20 0.10 2 2 0 0 0 0
............................................................................................................................................................................................AGTTAGGACTATCTTGTGGTCGAC....................................... 24 0 20 0.10 2 1 1 0 0 0
........................................................................................................................................................ACGTATTCGATGTTTCACTGTTAGTT......................................................................... 26 1 20 0.10 2 2 0 0 0 0
.....................................CTATGTGCAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................................ACGTATTCGATGTTTCACTGTTAG........................................................................... 24 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................CACTGTTAGTGCGATAAAAGT............................................................... 21 0 20 0.05 1 0 0 1 0 0
...................................................GATATTAGTGGAGTTAAGTGGTAAAC.............................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................TTACGTATTCGATGTTTCACTGT.............................................................................. 23 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................GTTAGGACTATCTTGTGGTCGACCT..................................... 25 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................TAGTGCGATAAAAGTAGTT........................................................... 19 0 20 0.05 1 0 1 0 0 0
............................................................................................CGCTCGACCTGCGAGACAATTTACTCGTGT................................................................................................................................. 30 0 20 0.05 1 0 1 0 0 0
.........................................................AGTGGAGTTAAGTGGTAAAC.............................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1
......................................................................................................................................................................................AAAAGTAGTTAGGACTATCTTGTGG............................................ 25 0 20 0.05 1 1 0 0 0 0
...................................................GATATTAGTGGAGTTAAGAGGTAAA............................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................ATGTGCAACGTTGATATTACTGGAGT.......................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................GTGCGATAAAAGTAGTTAGGACT..................................................... 23 0 20 0.05 1 0 1 0 0 0
...GCTCCTGAGGCTTTCCCGTGAGCGGT.............................................................................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ATACGTATTCGATGTTTCACTGTTAGT.......................................................................... 27 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................GGTCGACCTCCCGTATATGCAGC....................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................................................TCGACCTGCGAGACAATTTACT...................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
.....TCCTGGGGCTTGCCCGTGAGC................................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0
...............................................CGTGGATATTAGTGGAGTTAAGTGGT.................................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................AAGTTTAGTGCATACGTATTCGATGTT..................................................................................... 27 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................CGATAAAAGTAGTTAGGACTATCTT................................................ 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................ACCTGCGAGACAATTTACTCGTGT................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................CGATAAAAGTAGTTAGGACTATCTTGT.............................................. 27 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................TTTAGTGTATACGTATTCGATGTTT.................................................................................... 25 0 20 0.05 1 1 0 0 0 0
........................................TGTGCAACGTTGATATTTGTGGATT.......................................................................................................................................................................................... 25 2 20 0.05 1 0 1 0 0 0
...............................................................GTTAAGTGGTAAACGTTGCGCGT..................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................GCAGCTAAGTTGCGTGGACAACAACTGC 28 0 20 0.05 1 0 0 1 0 0
................GCCCGTGAGCGGTTAGCGCACTTA................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
......................GAGCGGTTAGCGCACTTATGTGCAAC........................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................ATTCGATGTTTCACTGTTAGTG......................................................................... 22 0 20 0.05 1 1 0 0 0 0
......................................................................................................GCGAGACAATTTTCTCGTGTTGCT............................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................TAAGTTTAGTGTATACGTATTCGATGT...................................................................................... 27 0 20 0.05 1 0 1 0 0 0
..AAATCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 27 3 20 0.05 1 0 0 1 0 0
......................................TATGTGCAACGTTGATATTAGTGGAG........................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
.................CCCGTGAGCGGTTAGCGCACT..................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
...GCTCCTGATGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
.......CTGAGGCTTGCCCGTGAGCGGTT............................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................GTTAGGACTATCTTGTGGTCGA........................................ 22 0 20 0.05 1 0 1 0 0 0
...........................................................TGGAGTTAAGTGGTAAACGTTGCGCG...................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
.............................................................................................................................................GTTTAGTGTATACGTATTCGATG....................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................TAGTTTAGTGTATACGTATTCGATGTT..................................................................................... 27 1 20 0.05 1 1 0 0 0 0
...GCTCCTGAGGCTCGCCCGTGAGCGGTT............................................................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................TAGTGCGATAAAAGTAGTTAGGACT..................................................... 25 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................CTTTAATAAGTTTAGTGTATACGTAT............................................................................................. 26 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................CTATCTTGTGGTCGACCTCCCGTATAT............................ 27 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................TAGGACTATCTTGTGGTCGACCTCCCGT................................ 28 0 20 0.05 1 1 0 0 0 0
...........................................................................................TAGCTCGACCTGCGAGACAATTTACTCGT................................................................................................................................... 29 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................TGTGGTCGACCTCCCGTATAT............................ 21 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................AAAAGTAGTTAGGACTATCTTGGT............................................. 24 2 20 0.05 1 0 1 0 0 0
......................................................................................................................................TTAATAAGTTTAGTGTATACGTATTCGA......................................................................................... 28 0 20 0.05 1 1 0 0 0 0
..............................................................................................TTCGACCTGCGAGACAATTTACTCGTGT................................................................................................................................. 28 1 20 0.05 1 0 1 0 0 0
...........................................GCAACGTGGATATTAGTGGAGTTAAGT..................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................GTTAGTGCCATAAAAGTAGTTAGGAC...................................................... 26 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................CGTGTTGCTTAACAACTTTAATAAGT............................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................AGCTAAGTTGCGTGGACAACA..... 21 0 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................ACTGTTAGTGCGATAAAAGTAGTTAG......................................................... 26 0 20 0.05 1 0 1 0 0 0
..........................................................................................GTCGCTCGACCTGCGAGACAAT........................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................GTATACGTATTCGATGTTTCACTGTT............................................................................. 26 0 20 0.05 1 0 1 0 0 0
...................................................................................................CCTGCGAGACAATTTACTCGTGTTG............................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................................CTCCCGTATATGCAGCTA..................... 18 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................TGTATACGTATTCGATGTTTCACTGTT............................................................................. 27 0 20 0.05 1 1 0 0 0 0
...................................................................................................................CTCGTGTTGCTTAACAACTTTAAT................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
...........................................................................................TCGCTCGACCTGCGAGACAATTTACTCGT................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................GTTTAGTGTATACGTATTCGATGTT..................................................................................... 25 0 20 0.05 1 1 0 0 0 0
...................CGTGAGAGGTTAGCGCACTTATGT................................................................................................................................................................................................................ 24 1 20 0.05 1 0 1 0 0 0
............................................................................................................................................AGTTTAGTGTATACGTATTCGATGTT..................................................................................... 26 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................GTGGTCGACCTCCCGTATATGCAGC....................... 25 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................GCAGCTAAGTTGCGCGGACAACAACT.. 26 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................................GTGTATACGTATTCGATGTTTCACTGT.............................................................................. 27 0 20 0.05 1 1 0 0 0 0
...................CGTGAGCGGTTAGCGCACTTATGT................................................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................AAGTTTAGTGTATACGTA.............................................................................................. 18 0 20 0.05 1 1 0 0 0 0
..............................................ACGCTGGTATTAGGGGAG........................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
.............................TAGCGCACTTATGTGCAACGTGGAT..................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
...GCTCCTGAGGCTTGCCCGTGAGAGGT.............................................................................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
..ATGTCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 27 3 20 0.05 1 0 0 1 0 0
..........................................................................................................................................TAAGTTTAGTGTATACGTATTCGAT........................................................................................ 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................AATAAGTTTAGTGCATACGTATTCGAT........................................................................................ 27 1 20 0.05 1 0 1 0 0 0
......................GAGCGGTTAGCGCACTTATGTGCAA............................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
...AGTCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 26 2 20 0.05 1 1 0 0 0 0
........................................TGTGCAATGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0
..............................................ACGTTGATATTAGTGGAGTTAAGTGGT.................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
.................CCCGTGAGCGGTTAGCGCACTTATGT................................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................GTTTCACTGTTAGTGCGATAAAAGT............................................................... 25 0 20 0.05 1 0 1 0 0 0
.......................................ATGTGCAACGTTGATATTAGTGGAGTT......................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................TAGTGCGATAAAAGTAGTTAG......................................................... 21 0 20 0.05 1 0 0 1 0 0
............................................................................................................................................................................................AGTTAGGACTATCTTGTGGTAGACCT..................................... 26 1 20 0.05 1 0 1 0 0 0
....TTCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
.........................................GTGCAACGTTGATATTAGTGGAGTT......................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
...................................ACTTATGTGCAACGTTGATATTAGTG.............................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
..................................................TGATATTAGTGGAGTTAAGTGGTAAACGT............................................................................................................................................................................ 29 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................AGTTAGGACTATCTTGTGGT........................................... 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................AGCTAAGTTGCGTGGACAACAACTGC 26 0 20 0.05 1 1 0 0 0 0
...GCTCCTGAGGCTTGCCCGTGAGCGGTT............................................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................TTTCACTGTTAGTGCGATAAAAGTAGTT........................................................... 28 0 20 0.05 1 1 0 0 0 0
...GCTCCTGAGCCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................TATCTTGTGGTCGACCTCCCGTATAT............................ 26 0 20 0.05 1 0 1 0 0 0
..........................................TGCAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................................CGACCTCCCGTAAATGCAGCTAAG................... 24 1 20 0.05 1 1 0 0 0 0
......................................TATGTGCAACGTTGATATTAGTGGAGTT......................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
ACCGCTCCTGAGGCTTGCCC....................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................CCCGTATATGCAGCTAAGTTGCGT............. 24 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................CAACTTTAATAAGTTTAGTGTATACGT............................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................................TGCAGCTAAGTTGCGTGGACA........ 21 0 20 0.05 1 0 0 1 0 0
............................................................................................CGCTCGACCTGCGAGACAATTTACTCG.................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..................................................TGATATTAGTGGAGTTAAGTGGT.................................................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................................................................................CCGTATATGCAGCTAAGTTGCGTG............ 24 0 20 0.05 1 1 0 0 0 0
.............................ATGCGCACTTATGTGCAACGTTGATAT................................................................................................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ATACGTATTCGATGTTTCACTGT.............................................................................. 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................AACTTTAATAAGTTTAGTGTATACGT............................................................................................... 26 0 20 0.05 1 1 0 0 0 0
...ATTCCTGAGGCTTGCCCGTGAGCGGTT............................................................................................................................................................................................................................. 27 2 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................ATCTTGTGGTCGACCTCCCGTATAT............................ 25 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................................GCTAAGTTGCGTGGACAACAA.... 21 0 20 0.05 1 0 0 1 0 0
................GCCCGTGAGCGGTTAGCGCACT..................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
............................................................GGAGTTAAGTGGTAAACGTTGCGCG...................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
...................CGTGAGCGGTTAGCGCACT..................................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
.......CTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
..................................................................AAGTGGTAAACGTTGCGCGT..................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................................CTGTTAGTGCGATAAAAGTAG............................................................. 21 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................GTTAGTGCGATAAAAGTAGTT........................................................... 21 0 20 0.05 1 0 1 0 0 0
.................................................................................................................TACTCGTGTTGCTTAACAACTTTAAT................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................TGTTAGTGCGATAAAAGT............................................................... 18 0 20 0.05 1 0 1 0 0 0
.............................................................GAGTTAAGTGGTAAACGTTGCGCGT..................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................................GGACTATCTTGTGGTCGACCTCC................................... 23 0 20 0.05 1 1 0 0 0 0
.............................................................................................GCTCGACCTGCGAGACAATTTA........................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................TTAGTGTATACGTATTCGATGTT..................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................GTTTCACTGTTAGTGCGATAAAAGTAGT............................................................ 28 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................GTTAGTGCGATAAAAGTAGTTAG......................................................... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................AAGTTTAGTTTATACGTATTCGATGT...................................................................................... 26 1 20 0.05 1 0 1 0 0 0
......................................................................................................GCGAGACAATTTACTCGTGTTGCT............................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0
...TCTCCTGAGGCTTGCCCGTGAGCGG............................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................ATGTGCAACGTTGATATTAGTGGATT.......................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...............................................................................................ACGACCTGCGAGACAATTTACTCGTGT................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
.........................................................................................AGTCGCTCGACCTGCGAGACAATTTACT...................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................AGTTTAGTGTATACGTATTCGAT........................................................................................ 23 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................AAAAGTAGTTAGGACTATCTTGTGGA........................................... 26 1 20 0.05 1 0 0 1 0 0
.............................................................................................................................................................................................................................ATGCAGCTAAGTTGCCTGGACAACA..... 25 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................TCACTGTTAGTGCGATAAAAGTAG............................................................. 24 0 20 0.05 1 1 0 0 0 0
.................................................................................................GACCTGCGAGACAATTTACTCGTG.................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
......................................TATGTGCAACGTGGATATTAGTGGAG........................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...ACTCCTGAGGCTTGCCCGTGAGCGGT.............................................................................................................................................................................................................................. 26 1 20 0.05 1 0 0 1 0 0
............................................................................................................................................AGTTTAGTGTATACGTATTCGATGT...................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.............CTTGCCCGTGAGCGGTTAGCGCACTT.................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................TTCACTGTTAGTGCGATAAAAGTAG............................................................. 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................AAGTAGTCAGGACTATCTTGTGGT........................................... 24 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................................ATATGCAGCTAAGTTGCGTGGACAACA..... 27 0 20 0.05 1 1 0 0 0 0
...............................GCGGACTTGGGTGCAACGT......................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................................ATATGCAGCTAAGTTGCGTGGACAAC...... 26 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................GATGTTTCACTGTTAGTGCGATAA................................................................... 24 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................................CTTCTTGTCGACCTCCCGTAT.............................. 21 2 20 0.05 1 1 0 0 0 0
...............................GCGCACTTATGTGCAACGTTGATATT.................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................ATGCAGCTAAGTTGCGTGGAC......... 21 0 20 0.05 1 0 0 1 0 0
.......................................................................................ACAGTCGCTCGACCTGCGAGACAATTT......................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................TGTGGTCGACCTCCCGTATATGCAGCT...................... 27 0 20 0.05 1 0 1 0 0 0
.......................AGCGGTTAGCGCACTTATGTGCAACGTT........................................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................TTGTGGTCGACCTCCCGTATATGCAGC....................... 27 0 20 0.05 1 0 1 0 0 0
........................................................................................CAGTCGCTCGACCTGCGAGACAAT........................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.......CCGAGGCTTGCCCGTGAGCGG............................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0
.............................................................................................................................................................................................................GGTCGACCTCCCGTATATGCAGCTAAG................... 27 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................CGATGTTTCACTGTTAGTGCGAT..................................................................... 23 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................TCGATGTTTCACTGTTAGTGCGATAA................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....TCCTGAGGCTTGCGCGTGAGCGGTT............................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................................TGCAGCTAAGTTGCGTGGACAACAA.... 25 0 20 0.05 1 0 0 1 0 0
.........................................GTACAACGTTGATATTAGTGGAGT.......................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
........................................TGTGCAACGTTGATATTAGCGGAGT.......................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................GTGGTCGACCTCCCGTATATGCAGCT...................... 26 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004590:3150426-3150676 - dwi_1829 TGGCGAGGACTCCGAACGGGCACTCGCCAAT------------------------------------CGCG--TGAATACACGTTGCAAC--------TATAATCACCTCAATTCACCATTTG---CAACGCGCACTGTCAGCGAGCTGGACGCTCTGTTAAATGAGCACAACGAATTGTTGAAATT-ATTCAAATCACATAT----GCATAAGCTACAAAGTGACAATCACGCTATTTTCATCAATCCTGATAGAACACCAGCTGGAGGGCAT--------ATACGTCGATTCAACGCACCTGTTGTTGACG
droMoj3 scaffold_6540:597649-597854 - GGACTG------CGAACGCGCACTCGCCATT------------------------------------CGCG--TGGATGCACGTTGCAAC--------TATAA---------------------------GCGA---GTCAGCGAGCTGGACGCTCTGTTAAATGAGCACAATGAATTGTTGAAATT-ATTCAAATCACACATACATACATGAGCTACAAAGTGGCAATCACGCTATTGTCATCAATCCTTATAGAACACCGGCTGGAGAGCAT--------ATACGTCGGTTCAAC----------------
dp5 Unknown_group_101:19281-19529 + ACTC--------C--ACGTGCACTCGACAAT------------------------------------CGCG--TGGATGCACGTTGCGAC--------TATCATAATCTCAAATCACATTTTG---CCAGGCGTATCGTCAGCGAGCTGGACGCTATGTTAAATGAGCACAATGAATTATTGAAACT-ATTCAAATCACACAT----GCACAAACTACAAAGTGACAATCATGCTATTGTCATCAATCCTGATATAACACCAGCTGGAGAGCATTTATGTACGTATGTAGATTCAATGCACCTGTTGTTGACG
droPer2 scaffold_90:119779-120028 - TACTCC---------ACGTGCACTCGACAAT------------------------------------CGCG--TGGATGCACGTTGCGAC--------TATCATAATCTCAAATCACATTTTG---CCAGGCGTATCGTCAGTGAGCTGGACGCTATGTTAAATGAGCACAATGAATTATTGAAATT-ATTCAAATCACACAT----GCACAAACTACAAAGTGACAATCATGCTATTGTCATCAATCCTGATACAACACCAGTTGGAGAGCATTTATGTACGTATGTAGATTCAATGCACCTGTTGTTGACG
droAna3 scaffold_12493:395-644 - TGGTGAGGACTCCACAAGTGCACTCGCCAAT------------------------------------CGTG--TGGATGCACGTTGCGAC--------TACCATAACCTCAATTCACCGTTTG---CA-AGCGTATCATCGGCGAGCTGGACGCTCTGTTAAATGAGCACAATGACTTATTGAAATT-ATTTAAATCACACAT----GCACAAGCTAGAAAGTGACAATCACGCTATTGTCATCAATCCTCATAGAACACCAGCTGGAGTGCAT--------ATACGTAGATTCAACGCACCTGTTGTTAACG
droBip1 scf7180000393679:10547-10797 + CGGCAAGGATTCCGGAAGCGCACTTGCCAAT------------------------------------CGCG--TGAATGCACGTTGTGAT--------TCTAATAACCTTGATTCTTTTTATG---CCAGACGTATCGTCTGCGAGCTAGATGCTCTTTTGAACGAGCACAATTAATTGTTGAAAAC-ATACAAATCACATAT----GCACCAATTACAAAGCGACAATCACGCTATCGTCATTAATCCTGATAAAACACCAGCTGGAGAGCAT--------ATTCGTAGATTCAATGCACCCGTTGTTGATG
droKik1 scf7180000300663:7562-7809 - CCGAGC-----------GGGCGCTTTGTTATCACCACAAAACAAAGATGAACTAAATCACCGCTGTGCAATTT---------------TTATTGCAACT-----------------------AAAC---GTAAAATTATCGAACAATCGCAAAATCTTCTCCATGAGCATAATGATTTGCTCAGATT-GTTCAAAACCGCATT----GGATATAATGCATTATGACGAACACAAAATCATTATCAGCGCTGACAAAAAACCCATTGGTAGCCAT--------GCAAGACAATTTAATGCTGCCACTATCAATG
droFic1 scf7180000452351:5776-5988 + CGGAGAGGATTCCGGAAGCGCACTTG------------------------------------------------------------------------------------GATTCATTTTATG---CCAGACGCATCGTCAGCGAGCTAGATGCTTTAACGAACGAGCACAATGAATTGTTGAAAAT-ATTCAAATCACATAT----GCACCAAATACAAAGCGATAATCACGCTATCGTCATTAATCCTGATAAAACACCAGCTGGAGAGCAT--------ATTCGTAGATTCAATGCACCCGTTGTTGATA
droEle1 scf7180000490380:1747-1955 + TTCGTC----------------------------------------------------GATGGTAAACAGAAA---------------ACACAACAG----------------------TTAAAGA---GACGCATTATTGAACAGTTGCAAGCATGTTTTCACGATAATAATGCTGTGGTTAATATTTGACATATTATTTTT----GGAACGAATGCCATCAGATACGCACAAATTTGTCATAAGAACGGATTGTACCCCAACAGGTGAACAT--------CTGCGAAGATTCAATGCACCCACCGTTAATG
droRho1 scf7180000779072:12614-12832 + TGATTT-----------------------------------GGAAGATGACCTAAATCAGCGTTGTGCAATTT---------------TCACTG----------------------------CAAC---TAAAAATTATACAACAATTGCAAAATCTTCTACATGAGCGTAATGAATTGGTCAGATT-GTTCAACACCACATT----GGATACAATGCATTCTGACGACCACAAAATCATTATCAGCGCTGAGAAAAGGCCCACTGGAAGCCAT--------GCAAGACAATTTAATGCTCCCACTATTAATG
droBia1 scf7180000302199:6688-6911 - CAACAT-----------------------------------GGAAGAACAACTTGATCGACGCCTAGGGATCA---------------ATGCAGGAATG-----------------------AAGC---GAGCAATTCTTCAAGACTTGCAGTGACTGCTTCATGAACATCATGCGTTGGTCAGGTT-GTTTAAGAGTGCTTT----AGAGCGCATGCCAAATGATGACTATAAAGTTGTCATCAAAGCAGATAAACGACCATCTGGAACACAC--------GAACGCACATTTAATGCTCCAACAGTAGACG
droTak1 scf7180000415512:18711-18932 - TTCGTC---------------GAT-----------------GGTGGAT-------------------CAGC--TGAATGTGCGGTGCAACACAACA----------------------GTTAAAGA---GACGAATTATTGAGCAGCTGCAAGCATTTTTTCACGCTAATAATGCTGTGGTTAATAT-GTTCAAAACAGCATT----GGAACGAATGCCATCGGATACGCACAAATTTGTCATAAGAGCGGATTGTACCCCAACAGGTGAACAT--------GTGCGAAGATTCAATGCACCCACCGTTAATG
droEug1 scf7180000409428:10725-10948 - CAACAT-----------------------------------GGAAGAACAACTTGATCGACGCCTAGGGATCA---------------ATGCAGGAATG-----------------------AAGC---GAGCAATTCTTCAAGACTTGCAGTGTCTGCTTCATGAACATCATGCGTTGGTCAGGTT-GTTTAAGAGTGCTTT----AGAGCGCATGCCAAATGATGACTATAAAGTTGTCATCAAAGCAGATAAACGACCATCTGGAACACAC--------GAACGCACATTTAATGCTCCAACAGTAGACG
dm3 chr3L:24002060-24002065 + CGGCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 node_133985:763-986 + CAATTC-----------------------------------AGCAAGAGAAGTCGATCAGCGTTGCGCATACA---------------ACAACTCAGTG-----------------------AAAA---GATCCATTGTGGAACAACTTCAAATATTTTTCCATCAACATAATGAATTAATTGCATT-ATTCAGAACTGCGTT----AGACCGCATGCCATCAGATAATCACAAAATTGTCATCAGAGCCGATAAGGCGCCTGCAGGACAACAT--------GCTGGACGTTTTAATGCGCCAACAATTGATG
droSec2 scaffold_968:674-895 + CAATTC-----------------------------------AGCAAGAGAAGTCGATCAGCGTTGCGCACACA---------------ACAATTCAGTG-----------------------AAAA---GATCCATTGTGGACCACTT-CAAATATTTTTCCATCAACATAATGAATTAGTGC-ATT-ATTCAGAACTGCATT----AGCCCGCATGCCATCAGATAATCACAAAATTGTTATCAGAGCCGATAAGGCGCCTGCAAGGCAACAT--------GCTGGACGTTTTAGTGCGCCAACAATTGATG
droYak3 v2_chrUn_5239:8676-8908 - CGATCA-----------------------------------TGAAGAG-------------------CGCG--TGACGACTCGGTGCCTG--------TATAATTTTATTGAATAAGCAGACG---GAAGAGCAATTGTGATATTATTGGCAAATTTTTTAGAAGATCACAATCAACTAATTCAATT-GATCAAAAGAGTTTC----GCCAAGACTGCAAAATGACAATTATCAAATCGTCATAAAAGCCGACAAAGTACCATTAGGTGAACAT--------GCTGGTAGATTCAACGCTCCAACTGTTGATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGGCGAGGACTCCGAACGGGCACTCGCCAAT------------------------------------CGCG--TGAATACACGTTGCAAC--------TATAATCACCTCAATTCACCATTTG---CAACGCGCACTGTCAGCGAGCTGGACGCTCTGTTAAATGAGCACAACGAATTGTTGAAATT-ATTCAAATCACATAT----GCATAAGCTACAAAGTGACAATCACGCTATTTTCATCAATCCTGATAGAACACCAGCTGGAGGGCAT--------ATACGTCGATTCAACGCACCTGTTGTTGACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................CGCACTGTCAGCGAGCTGGA..................................................................................................................................................................2011.00100100
..............................................................................................................................................................................................................................................................................................GTCGATTCAACGCACCTGTTGTTGA..25200.10202000
....................................................................................................................................................................................................................................................AATCCTGATAGAACACCAGCTGG..............................................23200.10220000
.............................................................................................................................................................................................................................................TTTCATCAATCCTGATAGAACACCAG..................................................26200.10202000
.............................................................................................................................................................................................................................................TTTCATCAATCCTGATAGAACACCAGCT................................................28200.10220000
.......GACTCCGAACGGGCACTCGCCAAT------------------------------------CG....................................................................................................................................................................................................................................................26180.06101000
..........TCCGAACGGGCACTCGCCAAT------------------------------------CGCG--................................................................................................................................................................................................................................................25190.05101000
..........TCCGAACGGGCACTCGCCAAT------------------------------------CG....................................................................................................................................................................................................................................................23190.05101000
....................CACTCGCCAAT------------------------------------CGCG--TGAATACACGTTG...................................................................................................................................................................................................................................28200.05101000
.....................................................................................................AATCACCTCAATTCACCATTTG---CAACG......................................................................................................................................................................................27200.05100010
......GGACTCCGAACGGGCACTCGCCAAT------------------------------------......................................................................................................................................................................................................................................................25200.05100010
....................................................................................TGCAAC--------TATAATCACCTCAATTCACCATT................................................................................................................................................................................................29200.05101000
..................................................................................................................................................................................................................................................................ACCAGCTGGAGGGCAT--------ATACGTCGATC....................27200.05100010
..................................................................................................................................................................................................................................................................ACCAGCTGGAGGGCAT--------ATACGTC........................23200.05100010
..................................................................................................................................................................................................................................AATCACGCTATTTTCATCAATCCTGA.............................................................26200.05101000
.................................................................................................................................................................................................................ATAAGCTACAAAGTGACAATCACGC...............................................................................25200.05100010
............................................................................ATACACGTTGCAAC--------TATAAAA................................................................................................................................................................................................................21200.05100010
..............................................................................................................................................................................AATTGTTGAAATT-ATTCAAAT.....................................................................................................................21200.05101000
.............................................................................................................................................................................................................................................TTTCATCAATCCTGATAGAACACCAGC.................................................27200.05100010
........................................................................................................................................................................................ATT-ATTCAAATCACATAT----GCATAAGC..................................................................................................26200.05101000
.....................ACTCGCCAAT------------------------------------CGCG--TGAATACACGTT....................................................................................................................................................................................................................................26200.05101000
............CGAACGGGCACTCGCCAAT------------------------------------CGCG--TGAA............................................................................................................................................................................................................................................27200.05101000
...................................................................................................................................................................................................................................................CAATCCTGATAGAACACCAGCTGGAG............................................26200.05101000
..........................................................................................................................................................TCTGTTAAATGAGCACAACGAATTGT.....................................................................................................................................26200.05101000
...........................................................................................................................................................CTGTTAAATGAGCACAACGAATTGT.....................................................................................................................................25200.05101000
.............................................................................................................................................................................................................................................................................GGCAT--------ATACGTCGATTCAACG...............21200.05110000
...............................................................................................................................................................................................................................GACAATCACGCTATTTTCATCAATCC................................................................26200.05101000
....................................................................................TGCAAC--------TATAATCACCTCAATTCACCA..................................................................................................................................................................................................27200.05101000
.GGCGAGGACTCCGAACGGGCACTCG...............................................................................................................................................................................................................................................................................................25200.05101000
.......GACTCCGAACGGGCACTCGCCAAT------------------------------------......................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................AGGGCAT--------ATACGTCGATTCAACG...............23200.05100010
.........................................................................................................................................................................................................................................................TGATAGAACACCAGCTGGAGGGCA........................................24200.05101000
.....................................................................................GCAAC--------TATAATCACCTCAATTCACCATT................................................................................................................................................................................................28200.05101000
........................................................................................................................................TGTCAGCGAGCTGGACGCTCTGTTAAAA.....................................................................................................................................................28200.05101000
.........................................................................TGAATACACGTTGCAAC--------TATAATCACCT............................................................................................................................................................................................................28200.05101000
........................................................................................................................................................................................................TAT----GCATAAGCTACAAAGTGACAATCA..................................................................................27200.05100010
......................................................................................................................................................................................AAATT-ATTCAAATCACATAT----GCAT......................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................................TACGTCGATTCAACGCACCTG.........21200.05101000
...CGAGGACTCCGAACGGGCACT.................................................................................................................................................................................................................................................................................................21200.05100100
droMoj3
GGACTG------CGAACGCGCACTCGCCATT------------------------------------CGCG--TGGATGCACGTTGCAAC--------TATAA---------------------------GCGA---GTCAGCGAGCTGGACGCTCTGTTAAATGAGCACAATGAATTGTTGAAATT-ATTCAAATCACACATACATACATGAGCTACAAAGTGGCAATCACGCTATTGTCATCAATCCTTATAGAACACCGGCTGGAGAGCAT--------ATACGTCGGTTCAAC----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
dp5
ACTC--------C--ACGTGCACTCGACAAT------------------------------------CGCG--TGGATGCACGTTGCGAC--------TATCATAATCTCAAATCACATTTTG---CCAGGCGTATCGTCAGCGAGCTGGACGCTATGTTAAATGAGCACAATGAATTATTGAAACT-ATTCAAATCACACAT----GCACAAACTACAAAGTGACAATCATGCTATTGTCATCAATCCTGATATAACACCAGCTGGAGAGCATTTATGTACGTATGTAGATTCAATGCACCTGTTGTTGACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TACTCC---------ACGTGCACTCGACAAT------------------------------------CGCG--TGGATGCACGTTGCGAC--------TATCATAATCTCAAATCACATTTTG---CCAGGCGTATCGTCAGTGAGCTGGACGCTATGTTAAATGAGCACAATGAATTATTGAAATT-ATTCAAATCACACAT----GCACAAACTACAAAGTGACAATCATGCTATTGTCATCAATCCTGATACAACACCAGTTGGAGAGCATTTATGTACGTATGTAGATTCAATGCACCTGTTGTTGACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TGGTGAGGACTCCACAAGTGCACTCGCCAAT------------------------------------CGTG--TGGATGCACGTTGCGAC--------TACCATAACCTCAATTCACCGTTTG---CA-AGCGTATCATCGGCGAGCTGGACGCTCTGTTAAATGAGCACAATGACTTATTGAAATT-ATTTAAATCACACAT----GCACAAGCTAGAAAGTGACAATCACGCTATTGTCATCAATCCTCATAGAACACCAGCTGGAGTGCAT--------ATACGTAGATTCAACGCACCTGTTGTTAACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................TACGTAGATTCAACGCACCTGTTGTT....2680.635311000
.................................................................................................................................AGCGTATCATCGGCGAGCTGGACG................................................................................................................................................................2420.501100000
...............................................................................................................ATTCACCGTTTG---CA-AGCGTATCG...............................................................................................................................................................................2320.501000010
.................................................................................................................................................................................................................................................................................T--------ATACGTAGATTCAACGCACCTGTTGTT....2880.504400000
........................................................................................AC--------TACCATAACCTCAATTCACCGT.................................................................................................................................................................................................2420.501010000
.........................................................................................................................TG---CA-AGCGTATCATCGGCGAGCTGG...................................................................................................................................................................2520.501100000
.................................................................................................................................................................................................................................................................................T--------ATACGTAGATTCAACGCACCTGTTGT.....2780.504211000
.............................................................................................................................................................................................................................................................................................CGTAGATTCAACGCACCTGTTGTT....2490.333210000
.......GACTCCACAAGTGCACTCGCCAAT------------------------------------CGTG--................................................................................................................................................................................................................................................2870.141100000
...............................................................................................................................................................................................................................................................................CAT--------ATACGTAGATTCAACGCACCTG.........2570.141100000
............................................................................................................................................................................................................................................................................................ACGTAGATTCAACGCACCTGTTGT.....2480.131010000
............................................................................................................................................................................................................................................................................................ACGTAGATTCAACGCACCTGTTGTT....2580.131010000
............................................................................................................................................................................................................................................................................................ACGTAGATTCAACGCACCTGTTGC.....2480.131010000
.................................................................................................................................................................................................................................................................................T--------ATACGTAGATTCAACGCACCTGTTG......2680.131100000
.................................................................................................................................................................................................................................................................................T--------ATACGTAGATTCAACGCACCTGTTGC.....2780.131010000
..............................................................................................................................................................................................................................................................................................GTAGATTCAACGCACCTGTTGTT....2390.111100000
..............................................................................................................................................................................................................................................................................................GTAGATTCAACGCACCTGTTGT.....2290.111100000
..........TCCACAAGTGCACTCGCCAAT------------------------------------CGTG--................................................................................................................................................................................................................................................2590.111100000
..................TGCACTCGCCAAT------------------------------------CGTG--TGGATG..........................................................................................................................................................................................................................................23100.101100000
.................GTGCACTCGCCAAT------------------------------------CGTG--TGGAT...........................................................................................................................................................................................................................................23120.081010000
................................................................................................................................................................................................................CACAAGCTAGAAAGTGACAATCACGC...............................................................................26130.081001000
................................................................................................................................................................................................AAATCACACAT----GCACAAGCTAGAAAGT..........................................................................................27130.081100000
...................................................................................................................................................................................................TCACACAT----GCACAAGCTAGAAAGTGAC.......................................................................................27140.071010000
..........................................................................................................................................................TCTGTTAAATGAGCACAATGACTTA......................................................................................................................................25160.061100000
droBip1
CGGCAAGGATTCCGGAAGCGCACTTGCCAAT------------------------------------CGCG--TGAATGCACGTTGTGAT--------TCTAATAACCTTGATTCTTTTTATG---CCAGACGTATCGTCTGCGAGCTAGATGCTCTTTTGAACGAGCACAATTAATTGTTGAAAAC-ATACAAATCACATAT----GCACCAATTACAAAGCGACAATCACGCTATCGTCATTAATCCTGATAAAACACCAGCTGGAGAGCAT--------ATTCGTAGATTCAATGCACCCGTTGTTGATGSizeHit CountTotal NormTotal
No Reads
droKik1
CCGAGC-----------GGGCGCTTTGTTATCACCACAAAACAAAGATGAACTAAATCACCGCTGTGCAATTT---------------TTATTGCAACT-----------------------AAAC---GTAAAATTATCGAACAATCGCAAAATCTTCTCCATGAGCATAATGATTTGCTCAGATT-GTTCAAAACCGCATT----GGATATAATGCATTATGACGAACACAAAATCATTATCAGCGCTGACAAAAAACCCATTGGTAGCCAT--------GCAAGACAATTTAATGCTGCCACTATCAATGSizeHit CountTotal NormTotal
No Reads
droFic1
CGGAGAGGATTCCGGAAGCGCACTTG------------------------------------------------------------------------------------GATTCATTTTATG---CCAGACGCATCGTCAGCGAGCTAGATGCTTTAACGAACGAGCACAATGAATTGTTGAAAAT-ATTCAAATCACATAT----GCACCAAATACAAAGCGATAATCACGCTATCGTCATTAATCCTGATAAAACACCAGCTGGAGAGCAT--------ATTCGTAGATTCAATGCACCCGTTGTTGATASizeHit CountTotal NormTotal
No Reads
droEle1
TTCGTC----------------------------------------------------GATGGTAAACAGAAA---------------ACACAACAG----------------------TTAAAGA---GACGCATTATTGAACAGTTGCAAGCATGTTTTCACGATAATAATGCTGTGGTTAATATTTGACATATTATTTTT----GGAACGAATGCCATCAGATACGCACAAATTTGTCATAAGAACGGATTGTACCCCAACAGGTGAACAT--------CTGCGAAGATTCAATGCACCCACCGTTAATGSizeHit CountTotal NormTotal
No Reads
droRho1
TGATTT-----------------------------------GGAAGATGACCTAAATCAGCGTTGTGCAATTT---------------TCACTG----------------------------CAAC---TAAAAATTATACAACAATTGCAAAATCTTCTACATGAGCGTAATGAATTGGTCAGATT-GTTCAACACCACATT----GGATACAATGCATTCTGACGACCACAAAATCATTATCAGCGCTGAGAAAAGGCCCACTGGAAGCCAT--------GCAAGACAATTTAATGCTCCCACTATTAATGSizeHit CountTotal NormTotal
No Reads
droBia1
CAACAT-----------------------------------GGAAGAACAACTTGATCGACGCCTAGGGATCA---------------ATGCAGGAATG-----------------------AAGC---GAGCAATTCTTCAAGACTTGCAGTGACTGCTTCATGAACATCATGCGTTGGTCAGGTT-GTTTAAGAGTGCTTT----AGAGCGCATGCCAAATGATGACTATAAAGTTGTCATCAAAGCAGATAAACGACCATCTGGAACACAC--------GAACGCACATTTAATGCTCCAACAGTAGACGSizeHit CountTotal NormTotal
No Reads
droTak1
TTCGTC---------------GAT-----------------GGTGGAT-------------------CAGC--TGAATGTGCGGTGCAACACAACA----------------------GTTAAAGA---GACGAATTATTGAGCAGCTGCAAGCATTTTTTCACGCTAATAATGCTGTGGTTAATAT-GTTCAAAACAGCATT----GGAACGAATGCCATCGGATACGCACAAATTTGTCATAAGAGCGGATTGTACCCCAACAGGTGAACAT--------GTGCGAAGATTCAATGCACCCACCGTTAATGSizeHit CountTotal NormTotal
No Reads
droEug1
CAACAT-----------------------------------GGAAGAACAACTTGATCGACGCCTAGGGATCA---------------ATGCAGGAATG-----------------------AAGC---GAGCAATTCTTCAAGACTTGCAGTGTCTGCTTCATGAACATCATGCGTTGGTCAGGTT-GTTTAAGAGTGCTTT----AGAGCGCATGCCAAATGATGACTATAAAGTTGTCATCAAAGCAGATAAACGACCATCTGGAACACAC--------GAACGCACATTTAATGCTCCAACAGTAGACGSizeHit CountTotal NormTotal
No Reads
dm3
CGGCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droSim2
CAATTC-----------------------------------AGCAAGAGAAGTCGATCAGCGTTGCGCATACA---------------ACAACTCAGTG-----------------------AAAA---GATCCATTGTGGAACAACTTCAAATATTTTTCCATCAACATAATGAATTAATTGCATT-ATTCAGAACTGCGTT----AGACCGCATGCCATCAGATAATCACAAAATTGTCATCAGAGCCGATAAGGCGCCTGCAGGACAACAT--------GCTGGACGTTTTAATGCGCCAACAATTGATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................TGCGCATACA---------------ACAACTCAGTG-----------------------AAAA---GA......................................................................................................................................................................................27119.001900010092220003000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCATTGTG.............................................................................................................................................................................2418.00800002000006000000
.....................................................................................................................................................................................................................................................................TGCAGGACAACAT--------GCTGGACGTTTT...................2517.00700010010201002000
.............................................AGAGAAGTCGATCAGCGTTGCGCATA..................................................................................................................................................................................................................................................2613.00300000000000003000
.................................................................................................................................................................CATCAACATAATGAATTAATTGCA................................................................................................................................2413.00300000001000002000
.....................................................................................................................................................................................................................................................................TGCAGGACAACAT--------GCTGGACGTTT....................2413.00300000000000012000
.............................................................................................TCAGTG-----------------------AAAA---GATCCATTGTGGAACAAC......................................................................................................................................................................2813.00300100010100000000
.....................................................................................................................................................................................................................................................................TGCAGGACAACAT--------GCTGGACGT......................2212.00200000000010001000
.........................................AGCAAGAGAAGTCGATCAGCGTTGCGCA....................................................................................................................................................................................................................................................2812.00200000000001001000
........................................................TCAGCGTTGCGCATACA---------------ACAACTCAGT.......................................................................................................................................................................................................................2712.00200000000000020000
........................................................................................................................................................................................................................................................................AGGACAACAT--------GCTGGACGTTTTAATGC..............2712.00200000000010010000
.................................................................................................................................................................................................................................TAATCACAAAATTGTCATCAGAGCCGATA...........................................................2912.00200000010100000000
............................................................................................................................................................................................................................................................TAAGGCGCCTGCAGGACAACAT--------GCTG...........................2612.00200000000000002000
.....................................................................................................................................................................................................................................................................TGCAGGACAACAT--------GCTGGACGTT.....................2312.00200000000002000000
...............................................................................................................................................................................................................................GATAATCACAAAATTGTCATCAGA..................................................................2412.00200000000010001000
....TC-----------------------------------AGCAAGAGAAGTCGATCAGCGT..........................................................................................................................................................................................................................................................2412.00200000000000011000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCATTGTGGAA..........................................................................................................................................................................2711.00100000000001000000
........................................................TCAGCGTTGCGCATACA---------------ACT..............................................................................................................................................................................................................................2011.00100000000001000000
................................................................................................GTG-----------------------AAAA---GATCCATTGTGGA...........................................................................................................................................................................2011.00100000001000000000
.......................................................................................................................................................................................................................TGCCATCAGATAATCACAAAATTGTCA.......................................................................2711.00100000000010000000
.................................................................................................................................................................................TAATTGCATT-ATTCAGAACTG..................................................................................................................2111.00100000001000000000
...................................................................................................................................................TTCAAATATTTTTCCATCAACATAA.............................................................................................................................................2511.00100000000000001000
...................................................................................................................................................................................................................................................................................................TTTAATGCGCCAACAATT....1811.00100000100000000000
...............................................................................................................................................................................................................................GATAATCACAAAATTGTCATCAGAGCC...............................................................2711.00100000000000001000
........................................................TCAGCGTTGCGCATACA---------------ACAACTCAGTA-----------------------...............................................................................................................................................................................................2811.00100000000000010000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCATTG...............................................................................................................................................................................2211.00100000000001000000
................................................................................................................................................................................................................................ATAATCACAAAATTGTCATCAGA..................................................................2311.00100000010000000000
.............................................................................................................................................................................................TTCAGAACTGCGTT----AGACCG....................................................................................................2011.00100000000000001000
.........................................................................................................................................................................TAATGAATTAATTGCATT-A............................................................................................................................1911.00100000000001000000
.................................................................................................................................................................................................................................................................................T--------GCTGGACGTTTTAATGCGCC...........2111.00100000000001000000
...TTC-----------------------------------AGCAAGAGAAGTCGATCAG.............................................................................................................................................................................................................................................................2211.00100000010000000000
............................................................................................................................................................................................................................................................TAAGGCGCCTGCAGGACAACAT--------GCTGT..........................2711.00100000000000001000
.................................................................................................................................................................................................................................TAATCACAAAATTGTCATCAGAGCCGA.............................................................2711.00100000010000000000
...TTC-----------------------------------AGCAAGAGAAGTCGATCAA.............................................................................................................................................................................................................................................................2211.00100000000000001000
...............................................................................................................................................................................................................................GATAATCACAAAATTGTCA.......................................................................1911.00100000000000001000
....................................................................................................................................................................................TTGCATT-ATTCAGAACTGCGTT----AGAC......................................................................................................2611.00100000000001000000
.....................................................................TACA---------------ACAACTCAGTG-----------------------AAAA---GATCCAT.................................................................................................................................................................................2611.00100010000000000000
............................................................................................................................................................................................................................................................TAAGGCGCCTGCAGGACAACAT--------GCAA...........................2611.00100000000000010000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCATTGTGGA...........................................................................................................................................................................2611.00100000000001000000
.........................................................................................................................................................................................................................................................CGATAAGGCGCCTGCAGGACAACAT--------G..............................2611.00100000000001000000
............................................................................................................................................................................................................................................................TAAGGCGCCTGCAGGACAACAT--------GC.............................2411.00100000000000001000
.....................................................................................................................................................................................................................................................................TGCAGGACAACAT--------GCTGGACGTTA....................2411.00100000000000001000
............................................................................................CTCAGTG-----------------------AAAA---GATCCATTGTGGAACAACT.....................................................................................................................................................................3011.00100000010000000000
.................................................................................................................................................................................TAATTGCATT-ATTCAGAACTGCGTT----AGA.......................................................................................................2811.00100000000001000000
............................................AAGAGAAGTCGATCAGCGTTGCGCATT..................................................................................................................................................................................................................................................2711.00100000000001000000
..............................................................TTGCGCATACA---------------ACAACTCAG........................................................................................................................................................................................................................2011.00100000000000001000
...........................................................................................................................................................................................................................................ATTGTCATCAGAGCCGATAAGGCGCC....................................................2611.00100000000001000000
...................................................................................................................................................TTCAAATATTTTTCCATCAACA................................................................................................................................................2211.00100010000000000000
..........................................................AGCGTTGCGCATACA---------------ACA..............................................................................................................................................................................................................................1811.00100000000001000000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCAT.................................................................................................................................................................................2011.00100001000000000000
....TC-----------------------------------AGCAAGAGAAGTCGATCAGCGTTG........................................................................................................................................................................................................................................................2611.00100000000001000000
.................................................................................................................................................................................TAATTGCATT-ATTCAGAACTGCGTT----..........................................................................................................2511.00100000000000010000
............................................................................................................................................................................................................................................................................................TGGACGTTTTAATGCGCCA..........1911.00100000000001000000
...............................................................................................................................................................................................................................GATAATCACAAAATTGTC........................................................................1811.00100000000001000000
..............................................GAGAAGTCGATCAGCGTTGCGCATA..................................................................................................................................................................................................................................................2511.00100000000000001000
.........................................................................................................................................................................................................................................................CGATAAGGCGCCTGCAGGACAACAT--------GC.............................2711.00100000000000001000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCA..................................................................................................................................................................................1911.00100001000000000000
CAATTC-----------------------------------AGCAAGAGAAGTCGATCAG.............................................................................................................................................................................................................................................................2511.00100000000000001000
............................................................................................................................................................................................................................................................................CAACAT--------GCTGGACGTTTTAAT................2111.00100000000000001000
..........................................................................................................................................................................................T-ATTCAGAACTGCGTT----AGACCGCA..................................................................................................2411.00100000000010000000
...................................................................................................................................................................................................ACTGCGTT----AGACCGCATGCCATCAGA........................................................................................2611.00100000010000000000
.....................................................................................................................................................................................................TGCGTT----AGACCGCATGCCATCAGA........................................................................................2411.00100000001000000000
...............................................................................................................................................................................................................................GATAATCACAAAATTGTCATCAGAGC................................................................2611.00100010000000000000
............................................................................................................................................................................................................................................................................................TGGACGTTTTAATGCGCC...........1811.00100000000001000000
....................................................................................................................................CCATTGTGGAACAACTTCAAATATT............................................................................................................................................................2511.00100000000000001000
........................................................................................................................................................................................................................................................................AGGACAACAT--------GCTGGACGTTTTAA.................2411.00100000000000001000
.....................................................................................................................................................................................TGCATT-ATTCAGAACTGCGTT----AGACCGC...................................................................................................2811.00100000010000000000
..........................................................................................AACTCAGTG-----------------------AAAA---GATCCATTGTGGAAC.........................................................................................................................................................................2811.00100000001000000000
...............................................................................................AGTG-----------------------AAAA---GATCCATTGTGGAACAA.......................................................................................................................................................................2511.00100000000001000000
.................................................................................................................................................................CATCAACATAATGAATTAATTGCAT...............................................................................................................................2511.00100000000000010000
.AATTC-----------------------------------AGCAAGAGAAGTCGATCAGCGT..........................................................................................................................................................................................................................................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................GGCGCCTGCAGGACAACAT--------GCTGGAA........................2611.00100000000000001000
.AATTC-----------------------------------AGCAAGAGAAGTCGATCAGCGTT.........................................................................................................................................................................................................................................................2811.00100000000010000000
...............................................................................................................................................................................................................................................................................................ACGTTTTAATGCGCC...........1511.00100000000001000000
...............................................................................................AGTG-----------------------AAAA---GATCCATTGTGGAACA........................................................................................................................................................................2411.00100000000001000000
........................................................TCAGCGTTGCGCATACA---------------ACAACTCAGAA-----------------------T..............................................................................................................................................................................................2911.00100000000000001000
..............................................................................................CAGTG-----------------------AAAA---GATCCATTGT..............................................................................................................................................................................1911.00100000000001000000
.................................................................................................................................................................................................................................................ATCAGAGCCGATAAGGCGCCT...................................................2111.00100000000001000000
.....................................................................................................................................................................................................................................................................TGCAGGACAACAT--------GCTGGA.........................1920.50100000000001000000
droSec2
CAATTC-----------------------------------AGCAAGAGAAGTCGATCAGCGTTGCGCACACA---------------ACAATTCAGTG-----------------------AAAA---GATCCATTGTGGACCACTT-CAAATATTTTTCCATCAACATAATGAATTAGTGC-ATT-ATTCAGAACTGCATT----AGCCCGCATGCCATCAGATAATCACAAAATTGTTATCAGAGCCGATAAGGCGCCTGCAAGGCAACAT--------GCTGGACGTTTTAGTGCGCCAACAATTGATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGATCA-----------------------------------TGAAGAG-------------------CGCG--TGACGACTCGGTGCCTG--------TATAATTTTATTGAATAAGCAGACG---GAAGAGCAATTGTGATATTATTGGCAAATTTTTTAGAAGATCACAATCAACTAATTCAATT-GATCAAAAGAGTTTC----GCCAAGACTGCAAAATGACAATTATCAAATCGTCATAAAAGCCGACAAAGTACCATTAGGTGAACAT--------GCTGGTAGATTCAACGCTCCAACTGTTGATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................TGAAGAG-------------------CGCG--TGACGACTCGGTGCC.................................................................................................................................................................................................................................2670.86601400010000
............................................................................................................................................................................TCAACTAATTCAATT-GATCAAAAGAGT.................................................................................................................2770.86600500000001
...............................................................................................................................................................................................................................................................AGTACCATTAGGTGAACAT--------GCTGG..........................2450.80404000000000
...............................................................................................................................................................................................................................................................AGTACCATTAGGTGAACAT--------GCTG...........................2350.80403100000000
.........................................TGAAGAG-------------------CGCG--TGACGACTCGGTGC..................................................................................................................................................................................................................................2570.57401300000000
..............................................................................................................................................................................................................................TGACAATTATCAAATCGTCATAAAAGCC...............................................................2850.40201100000000
................................................................................................................................................................................................................................................................GTACCATTAGGTGAACAT--------GCTG...........................2250.40202000000000
.................................................................................................................................................................................................................................................................TACCATTAGGTGAACAT--------GCTGGTAGA......................2650.40201100000000
.................................................................................................................................................................................TAATTCAATT-GATCAAAAGAGTTTC----GCC.......................................................................................................2850.40200200000000
...............................................................................................................................................................................................................................................TCATAAAAGCCGACAAAGTACCATTAGG..............................................2830.33101000000000
...............................................................................................................................................................................................................................................TCATAAAAGCCGACAAAGTACCATT.................................................2530.33101000000000
............................................................................................................................................................................TCAACTAATTCAATT-GATCAAAAGAGC.................................................................................................................2770.29200200000000
.............................................................................................................................................................................................................................................................................................GGTAGATTCAACGCTCCAACTGTTGA..2650.20101000000000
...............................................................................................................................................................................................................................................................................................TAGATTCAACGCTCCAACTGTTG...2350.20101000000000
..............................................................................................................................................................................................................................................................................................GTAGATTCAACGCTCCAACTGTTG...2450.20101000000000
............................................................................................................................................................................................................................................................................................TGGTAGATTCAACGCTCCAACTGTTGA..2750.20101000000000
..................................................................................................................................................................................................................................................................ACCATTAGGTGAACAT--------GCTGGTAGA......................2550.20101000000000
...................................................................................................................................................................................ATTCAATT-GATCAAAAGAGTTTC----GCC.......................................................................................................2650.20101000000000
.....................................................................................................................................................................................................................................TATCAAATCGTCATAAAAGCCGACA...........................................................2550.20101000000000
...............................................................................................................................................................................................................................................................AGTACCATTAGGTGAACAT--------GCTGGTA........................2650.20100010000000
.........................................................................................................................................................................................................................................................CGACAAAGTACCATTAGGTGAACAT--------...............................2550.20100100000000
.........................................................................................................................................................................................................................................................CGACAAAGTACCATTAGGTGAACA........................................2450.20101000000000
..................................................................................................................................................................................................................................AATTATCAAATCGTCATAAAAGCCGACA...........................................................2850.20101000000000
....................................................................................................................................................................................................................................................................CATTAGGTGAACAT--------GCTGGTAGATTCAA.................2850.20101000000000
.................................................................................................................................................................................................................................................................TACCATTAGGTGAACAT--------GCTG...........................2150.20101000000000
...........................................................................................................................................................................................................................................................................TGAACAT--------GCTGGTAGATTCAACGCT.............2550.20101000000000
............................................................................................................................................................................................................................................................................GAACAT--------GCTGGTAGATTCAACGCTCC...........2650.20100100000000
........................................................................................................................................................................................................................................................................AGGTGAACAT--------GCTGGTAGATTCAACGC..............2750.20100100000000
....................................................................................................................................................................................TTCAATT-GATCAAAAGAGTTTC----GCC.......................................................................................................2550.20100100000000
...........................................................................................................................................................................................................................................................................TGAACAT--------GCTGGTAGATTCAACGCTCCA..........2850.20100100000000
................................................................................................................................................................................................................................ACAATTATCAAATCGTCATAAAAGCC...............................................................2650.20100100000000
..................................................................................................................................................................................................................................................TAAAAGCCGACAAAGTACCATTAGGTG............................................2750.20101000000000
..............................................................................................................................................................................................................................................................AAGTACCATTAGGTGAACAT--------GCTGG..........................2550.20101000000000
..................................................................................................................................................................................................................................AATTATCAAATCGTCATAAAAGCCG..............................................................2550.20101000000000
..................................................................................................................................................................................................................................................TAAAAGCCGACAAAGTACCATTAGG..............................................2550.20101000000000
......................................................................................................................................................................................CAATT-GATCAAAAGAGTTTC----GCCA......................................................................................................2450.20101000000000
.......................................................................................................................................................................................................................................TCAAATCGTCATAAAAGCCGACAAAG........................................................2650.20100100000000
...............................................................................................................................................................................................................................................................................................TAGATTCAACGCTCCAACTGTTGAT.2550.20101000000000
.......................................................................................................................GACG---GAAGAGCAATTGTGATATTATT.....................................................................................................................................................................2650.20101000000000
...................................................................................................................................................................................ATTCAATT-GATCAAAAGAGTTTC----GC........................................................................................................2550.20101000000000
.............................................................................................................................................................................CAACTAATTCAATT-GATCAAAAGAGC.................................................................................................................2670.14100100000000
...........................................AAGAG-------------------CGCG--TGACGACTCGGTGCC.................................................................................................................................................................................................................................2470.14100100000000
...................................................................CGCG--TGACGACTCGGTGCCTG--------TATA...................................................................................................................................................................................................................2570.14101000000000
.........................................TGAAGAG-------------------CGCG--TGACGACTCGGC....................................................................................................................................................................................................................................2370.14100100000000
..................................................................................................................................................................AAGATCACAATCAACTAATTCAATT-GA...........................................................................................................................2770.14101000000000
.........................................TGAAGAG-------------------CGCG--TGACGACTCGGTG...................................................................................................................................................................................................................................2470.14100010000000
..............................................AG-------------------CGCG--TGACGACTCGGTGCCTG--------TA.....................................................................................................................................................................................................................2570.14101000000000
......................................................................................................................................................................TCACAATCAACTAATTCAATT-GATC.........................................................................................................................2570.14100100000000
....................................................................................................................................................................GATCACAATCAACTAATTCAATT-GAT..........................................................................................................................2670.14100100000000
.............................................GAG-------------------CGCG--TGACGACTCGGTGCCTG--------.......................................................................................................................................................................................................................2470.14100100000000
..............................................................................................................................................................................AACTAATTCAATT-GATCAAAAGAGC.................................................................................................................2570.14100100000000
............................................................................................................................................................TTTTAGAAGATCACAATCAACT.......................................................................................................................................2270.14101000000000
.............................................................................................................................................................................CAACTAATTCAATT-GATCAAAAGAGT.................................................................................................................2670.14100100000000
......................................................................................................................................................................TCACAATCAACTAATTCAATT-A............................................................................................................................2270.14101000000000
...............................................G-------------------CGCG--TGACGACTCGGTGCCTG--------TATA...................................................................................................................................................................................................................2670.14101000000000
..............................................AG-------------------CGCG--TGACGACTCGGTGCCT................................................................................................................................................................................................................................2270.14101000000000
.........................................TGAAGAG-------------------CGCG--TGACGACTCGG.....................................................................................................................................................................................................................................2270.14101000000000

Generated: 05/18/2015 at 02:34 AM