ID:

dwi_1775

 Coordinate:

scf2_1100000004590:931999-932133 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.4 -24.2 -24.0

Flybase annnotation

exon [dwil_GLEANR_16641:1]; exon [dwil_GLEANR_16641:2]; CDS [Dwil\GK16266-cds]; CDS [Dwil\GK16266-cds]; intron [Dwil\GK16266-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
(CTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------##################################################
AAACACAACAATCGCAACAACAAGCAACAGCAGCAGCTGATGATAGCGATGAAATGGATCAAAAACCAACAGCAGCAACAACATCATCATCATCAGCAGCAGCAGCAGCAGGAGGGGGAGCGGGATCATCAGCATCTGGAGCAGCAGCATCATCATCATCAGCAGGTGGAGCATCTGGATCCAAGGCGACCAGCAAACAAGTGCCAAAGAAACGTAAAAGCGCCTTCACCGAAGA
**************************************************....((((((.........(((..((.......((.((.((.((.((.((....)).))..)).)).))..))........))..)))...(((..((.(((((..........))))).))..)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V117
male body		 M045
female body
 M020
head
....................................................................................................................................................................GGTGGAGCATGTGGTTCAAAGG................................................. 22 3 1 1.00 1 0 1 0 0
...............................................GATGAAATGGATCAAAAAC......................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
..........................................................................................................AGCAGGAGGGGGAGCGGG............................................................................................................... 18 0 1 1.00 1 1 0 0 0
.....................................................................................................................................ATCTGGAGCGGCATCATCATCAT............................................................................... 23 2 2 0.50 1 0 1 0 0
..............................................................................................................................................................TCAGCTGGTAGAGCATCTG.......................................................... 19 2 3 0.33 1 0 0 1 0
....................................................................................................AGCAGCAGCGGGAGTGGGAGCGG................................................................................................................ 23 2 3 0.33 1 0 1 0 0
..............................................................................................................................................................TCAGCTGGTAGAGCATCT........................................................... 18 2 8 0.25 2 0 0 0 2
................................................................................ACATCATCATCATCAGCAGCAGCAGC................................................................................................................................. 26 0 6 0.17 1 1 0 0 0
............................................................................................TCAGCAGCAGCAGCAGCAGG........................................................................................................................... 20 0 10 0.10 1 0 0 1 0
.......................................................................................CATCATCAGCAGCAGCAGC................................................................................................................................. 19 0 20 0.10 2 2 0 0 0
....................................................................................................................................................................AGTGGAGCATCTGGTTCTA.................................................... 19 3 16 0.06 1 0 0 1 0
..............................................................................................................................................................TCAGCCGGGAGAGCATCTG.......................................................... 19 3 19 0.05 1 0 0 1 0
....................................................................................CATCATCATCAGCAGCAGCAGCAGC.............................................................................................................................. 25 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

TTTGTGTTGTTAGCGTTGTTGTTCGTTGTCGTCGTCGACTACTATCGCTACTTTACCTAGTTTTTGGTTGTCGTCGTTGTTGTAGTAGTAGTAGTCGTCGTCGTCGTCGTCCTCCCCCTCGCCCTAGTAGTCGTAGACCTCGTCGTCGTAGTAGTAGTAGTCGTCCACCTCGTAGACCTAGGTTCCGCTGGTCGTTTGTTCACGGTTTCTTTGCATTTTCGCGGAAGTGGCTTCT
**************************************************....((((((.........(((..((.......((.((.((.((.((.((....)).))..)).)).))..))........))..)))...(((..((.(((((..........))))).))..)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V119
head
..........................................................................................................................CCTGGAAGTCGGAGACCTCG............................................................................................. 20 3 3 0.33 1 1 0 0
............GCGTTGTTGCTCGTCGTCGTCGTC....................................................................................................................................................................................................... 24 2 4 0.25 1 0 1 0
..........................................................................................................................................................................................GTTGGTCGATTGTTGACGGT............................. 20 3 20 0.15 3 3 0 0
.......................................................................CGTCGATATTGTAGTAGTAGTAG............................................................................................................................................. 23 2 8 0.13 1 0 0 1
............................................................................................................................................................................................TGGTCGATTGGTCACGGT............................. 18 2 13 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004590:931949-932183 - dwi_1775 AAACACAACAATCGCAACAACAAGCA-------ACAGCAGCAGC-----------------------------------------------------------------------TGATGATAGC-----G-------ATGAAATGGATC----------------------------------------------------------------------------------------------------------------------------------------AAAAACCAACAGCAG------CAAC---------------A-----------ACA------------------------------------TCATCATCATCAGCAGCAGCAGCAGCAGGAGGGGGAGCGGGAT-----------------------CATC------------------------------------------------------------------------AGC---------------------------------AT---CT-----------------------------GGAGCAGCAGCATCATCAT------CA----------------------------------------------------------TCAGCAGGTGGAGCA---TCTGGATC---------------CAA----GGCGACCAGCAA---------------------------A---------------------------CAAGTGCCAAAGAAACGTA-AAAGCGCC---TTC----ACC-------------------------------------------GAAGA
droVir3 scaffold_13042:2617531-2617748 - AACAACAA---------C---A--------------GCA-CAAC------------AGCAAC---------------------------------------------------------------------------------------------------------------------------G---------------GCAGCATCA---------------------ACAACAGTAACAGCAAATA-----------------------------------CAGTAAT-----TCAA------------------CCACAACAGCAACAGCAAC---AACA-----TCATCAGCAGCAGCAGCA---------------------------------------------------G-----------------------CAGCAG-----------------------CAACAGTC------ATAA-------------A---------------TGC------------------AACTGCAACAACAACAACATTAGCTGCAGC--TA---------------TACA-----CAGCAACA-------------------------------------------------------GCGACAATGCT----GCAACAGCCACAGCAACTGCAACAGC-----------------------------------A---------AC-------------------------------------------------------------------------TGC----ACT-----------------------------------------------G
droMoj3 scaffold_6540:6398014-6398241 + AACAGCAA---------C---AA-------GAG-CAACAGAAAA------------A-----------------------------------------------ACAGCAACAGCAGC----AG-CAATTGCAACAATAGGAAATGCAGCAA-----------------------------TG------------------------------------------------GCAACAGCAACAGCAGCAG-----------------------------------CAACAA-CA------G------A-----------------------------------------AGCAGCA---------------------------------------------------------G---CAGTAACACCAGCAAAACCAG-----CAGCA--------------------------------GCAATA---G-------------GAGCAGCAGCAGCAGCAGC---------------------A------------G---CA--------------GCAGCAGCAGCAACAGGAG---CAG----------------------------------------------------------------CAGCAAGAAGAGAAGCAACAGAAGCA---ACAGCAGC--------------------------------------A------------------------------------------------------------------------------------TCAG-----------------------------------------------TAGC
droGri2 scaffold_15110:3001772-3001987 - CAG--------------C---A-----------ACAGCAGCAGC------------ATCAGA----------------------------------AGCACCAG---------------------CAGTTGCAG--------------------------------CAACGCAT---------------------------------------------------------------------------------------------------------------------------CCAA------------------CAACATCAGC------------AACTCC--AACA---------------------------G------------------CAACA-------------------------------------------------------------------------------------TC-------------------AA---CAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAACAACATTCGCATCAGA--AA---------------------------CAT------CAACAGCT------GC---------------ACGAGCTGCTCTCAGCGGGACCAAGGACACCA-----------------------------------------------------------A----------------TG------------A-------CGAGTGGCAGC-GGCGCAA-------------------------TGCC---TTC----GCC-----------------------------------------------G
dp5 XR_group6:6489912-6490152 + CAA--------------C---A-----------ACAGCAGCACC------------AGCAGC---------------------------------------------------------------------------------------------------------------------------AATAGCAGCAGCAGCGGCGGCGCCA---------------------ACAATAGCAGCAGTGGCAG-----------------------------------CAACAATCAACAGCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAACAACAACAACAACAACAGCAGCAGC--AACAACAACAGCAGCAA------------CAGCAGCAA------CAA------C----------------------------A---------------------GCAGCAGCAACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GCAGCCGCCGCAAGTTCGTACCTATGGAACGATGAAGGTGCC---TTC----GTC-----------------------------------------------G
droPer2 scaffold_82:107712-107957 - AACAGCAG---------C---A--------------CCAGCAGC------------AATAGC---------------------------------------------------------------------------------------------------------------------------A------GCAGCAGCGGCGGCGCCA---------------------ACAATAGCAGCAGTGGCAG-----------------------------------CAACAATCAACAGCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------CAACAACAACAACAACA--------------------ACAACA---G-------------CAGCAACAACAACAGCAGCAACAA---------------------CA-----------------------------GCAGCAACAACAACAG---CAG----------------------------------------------------------------CAACAACAACAGCAGCAACAACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GCAGCCGCCGCAAGTTCGTACCTATGGAACGATGAAGGTGCC---CTC----GTC-----------------------------------------------G
droAna3 scaffold_13117:5219518-5219769 - CAT--------------C---AA-------GCA-CAACAACAAC------------ATCAGC----------------------------------AGCAGCAG---------------------CAATCACAA--------------------------------CAACATAAGCAGCAACA------------------------------------------------GCAGCAGCACCAGCAGCAG------------------------------------------------------------------------------C------------AACA--TCTTCAGCAGAAGCAGCAACA---------------------------------------------------G-----------------------CAGCAGCAACATCAACCAACACAGCAGCA--------GCAATCGCAG-GCACATCAGCAACTCCAGGCTCATCAGCAGCAACAT---------------------CT-----------------------------CCATCAGCAACAGCAG---CAG----------------------------------------------------------------CAACACCACCATCAGCAGCAGCAGCA---ACAGCAAC--------------------------------------A------GC-------------------------------------------------------------------ATC---ATC----ACCAG-------------------------------------------AAA
droBip1 scf7180000395751:160814-161058 + CAG--------------C---A-----------GCAGCAACAAC------------AGCAGC----------------------------------AGATGCAG---------------------CTGGCGCAG--------------------------------CA---------------------------------------------------------------GCAACAGCA------------------------------------------------------------G------G------------CTCTCCAGC------------AACACC--ACCAGC---A------------------------------------------------------C------------------CTCCAA-----CAGCA---------------------------------------------------------------G---CACCAGC---------------------AGCAACAGCAACAACAACAGCAGCAGC--AA---------------------------CAA------CAACAGCA-------------------------------------------------------------GCAGCAGCA------GAAGCTGAAGCAGTCGCAGGCGGCAAGTGCGGCGGCCAACAACAAGG---------------------------CCA------CCAATCTCACCAAGGACTCGCCCAAGCAAAAGA-GC---AGC---GCC----GCC---------------------GAG-------------------GAGGA
droKik1 scf7180000302685:196129-196390 + ACAC--CA---CTGCCGC---AG-------CA-GCAGCAGCAGCCGCCGCCCATGAATCAGATGCATCAGCCGTACCCTCACCCCGGATTTTCAAT--------TCATCAACAGCAGC----AG------------------------------------------------CAGCAACAACAACA---------------------------------------------GCATCTACA------------------------------------------------------------GCAGCAGCAACAACAGCATT---------------------TACA--GCAGCAGC------------AACAACAGCA------------------------------------------------------TT-----TACAGCAGCA-----------------------------------------G-------------CAGCATTTACAGCAGCAGCAACAA---------------------CA------G---CA--------TCTA---------------------------------------------------C----------------------------AGCAGCAGCAACAACAGCATTTACAGCAGCAGCAGCA---GCAGCATT--------------------------------------T------------------------------------------------------------------------------------ACAG-----------------------------------------------CAGC
droFic1 scf7180000454072:974141-974362 - AAC--------------C---G-----------GCAGCAACATCCACTGCCCAA-------------------------------------------------------------------TAGC--------------------------------------CATCAACTGCAACAGCAGCA------------------------------------------------GCAGCA------------ACA---------------------------------------------ACAG------C---------------AGCAGC------------AACA--TCAGCAGCAGCAGCAACA----------------------------------------------------------------------------------------------------------------------------TC-------------------AG---CAGCAGCAACAT---------------CA------------T---CA--------CCAGCAGCATCA---------GCAG---CAGCAGCAGCAT------CATCATCAGATGCAGCACCATCTAAACCACC---ACCAGACGGCGCCAAGGAAACCA-----------------------------------------------------------C----------------CGA-----------AAAA-------------GC-ATAGCGA-------------------------GATC---TCC----AC------------------------------------------------C
droEle1 scf7180000491356:120748-120998 - AACACCAG---------C---A-----------ACAGCAGCAAC------------ATCAGC---------------------------------------------------------------------------------------------------------------------------A------ACAG---------CA------GCAACATCTGCAGCAGCAGCAACATCA------------------------------------------------------------G------C------------AACAGCAGC------------AACACC--ATCAGC---AGCAACAACA---------------------------------------------------G-----------------------CAGC---------------------------------------------------------------AA---------------------CACCATCAGCAGCAGCAGCAACACCATCAGCAGCAGC--AA---------------------------CAC------CATCAGCA------GC---------AGCA----------------------GCAGCAACACCACCAACAGCAACAGCAGCA---GCAGCAAC-----------------------------------A---------AC--------------------------------------------------------------------T--------C--ACCAGCAATATGAGCCTGCTGACCATCAAAGGCGGTGGTCGTTACCTTTGG
droRho1 scf7180000773422:51656-51872 + CGA-G------------C---A-----------GCAGAGGCGGC------------AGCACC---------------------------------------------------------------------------------ATGCTGTGGAAACGATAGAACAGAAGCAGCAAAAGCAACG------------------------------------------------CCACCA---------------------------------------------------------------T------------------CCCCAGCAGC------------A-----------------------------------GCAG------------------CAACATCAGCAGCAGCGGCAA-----------------------CATC---------------------------------------------------------------AG---------------------CAGCATAACCCACAGCAGCAACATCATTTGCAGCAGC--AA---------------------------CAT------CAT---AT------AC---------AGCAGCA-------------------ACAGCAACTACATGCACAGG------A---GCAACATCAGC-----------------------------------A---------AC------------------------------------------------------------------CGCATGC---ACAG-----------------------------------------------GA-G
droBia1 scf7180000298389:751794-751999 + AGCAGCAA---------C---A--------------GCCGCACC------------ATCAGC---------------------------------------------------------------------------------------------------------------------------A------GCAG---------CAGCA------ACA------------GGCGCA------------------------------------------------------------CCAT------C------------AGCAGCAGC------------AACTCC--ACCAGC-----------------------------------------------------------------------------------AGCAGCAACA-----------------------------------------G-------------CCACACCACCAGCAGCAGC---------------------CGCAGCAGCACCATCAACAGCAGCAGC--AA---------------------------CTC------CACCAGCA-------------------------------------------------------------CCAGCAGCACCA---GCAG--------------------------------------------------C--------------------------------------------------------------------T--------C--GCCAGCAACATGAGCCTGCTGACCGTGAAGGGCG---GCCGCTACCTTTGG
droTak1 scf7180000415769:748300-748514 - AGCAACAA---------C---T--------------ATTGCTGC------------AAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCGCAGC------TAATGAAAT-------CA--AATCGAATGCCA------CAGC---------------A-----------GCA------------------------------------ACAT------------------CAACACCAGCAGCAGCTGCAG-----------------------CAGCTG-----------------------CAACAGCA------ACGCC----------------------------AGC-----------------------------------------------------------------AACTACAACAGCAACATCAGCAA------CT------AC---------AACAGCA----------------------------------AAAGCAACTAAA---CGAACAAGAAC-----------------------------------C---------ACTGAGAGGCCAGTGTA-------CAGATACCCGA-TAAACGA-------------------------GGGC---TCC----TTC-----------------------------------------------A
droEug1 scf7180000409061:49402-49605 - CAA--------------C---A-----------ACAGCAACAAC------------ATCAGC----------------------------------AACAACAG---------------------CATC-----------------------------------------------AGCAGCA------------------------------------------------ACAACACCA---------------------------------------------------------CCAG------C---------------AGCAGC------------AACACC--ACCAACA---------------------------------------------------------G-------------------------------------------------------------CAGCA------ACACC-------------------AC---CAACAGCAACAA---------------------CA------T---CT--------ACAACAGCAGCAGCAGCAA------------CACCA----------------------------------------------------------------------GCAGCAGCAGCA---GCAACATCAAC-----------------------------------A---------AC--------------------------------------------------------------------T--------C--ACGAGCAACATGAGCATGTTGACCGTTAAAGGCG---GTCGTTACCTTTGG
dm3 chrX:5647013-5647243 + CAG--------------C---A-----------TCAGCAGCAGC------------AACACC---------------------------------------------------------------------------------------------------------------------------A------------------------------------------------GCA------------GCACCAGCAGCAGC------------------------------------------------------------------------------AACA--CCAGCAGCAGCAGCACCAGCAACACCAGCA------------------------------------------------------GC-----AACAGCAGCAG------------------------------------------------------CAACACCAACATCAGCAGC---------------------AGCAACAGCAACACCTTCAGCAGCAGC--AA---------------------------CAC------CACCAGCT------GC---------AGCAGCA----------------------------------ACAGCAGCAGCA---GCAGCATCAAC-----------------------------------A---------AC--------------------------------------------------------------------T--------C--GCCAGCAACATGAGCCTGCTGACCGTCAAAGGCG---GCCGTTACCTTTGG
droSim2 x:8497744-8497941 - CAAAGCAG---------C---AG-------GCG-AAGGAGGAGC------------A---------------------------------------------------------------------------------------------------------------------------------------GCAG---------CAACAGCAGCCAGAGTTGCAGCAACATCAGCA------------------------------------------------------------GCAG------CAACAGCAGCAAC---------------------GACA--GCAGCAGCAGCAACATCAACAG---------------------------------------------C-----------------------------------------------------------------------------------------------AA---------------------CAGCATCAGCA------------A---CT--------------GCAGCAGCAGCAACAGCAGCAGCAACAACAGCAA------CT------GA---------AGCAACA----------------------------------ACATCAGCCCGA------------CC--------------------------------------AGCAGCAAC---------------------------------T------------------------------------------GCAG-----------------------------------------------AAGA
droSec2 scaffold_1:10462925-10463119 - AGCAGC-----------------------------AGATGCAAC------------AGATGC---------------------------------------------------------------------------------------------------------------------------A------GCAG---------CA------------------------------------------GCA---AC---AGATGCAGCAAATGAACTGCAACTACAACTACCAACAGGAG------CAGC---------------A-----------GCA------------------------------------GCTC--------------------------------------------------------------C------------------------------------------------------------------ATCATCAGCAGC---------------------AGCTTCAGC---AT---CA--------------GCAGCAGCAG--GCTAAAATCCC---------------------------------------------AAC----------------------------------------ACCA---GCAG---------------GTTACAA----CACAACCAACAA---------------------------CAATGT-AC--------------------------CGATGACACCC--------AC---AAC----GTC-------------------------------------------AGAGA
droYak3 3R:25034551-25034786 - ACACGAAGCCATCGCCACTGCGAGCATCCA------CCAG--------------------------------------------------------------------------CAGCTGGCAGC-----T-------TAGCAATGCAGCATTCAAGTCGCGCCTGCAACAGCAACAGCTACT------------------------------------------------GCAGCA------------GCACCAGCAACAGA------------------------------------------------------------------------------TACA--GCAGCAGCAGCAGCACGAGCAG--------------------------------------------------------------------------C------------------------------------------------------------------AG---------------------CAGCAACAGCA------------A---CA--------------GGAGCATCAGCAACAGGAGCTGCAGCAACAGCAA------CA----------------------------------------------------------ACAGCAACAGCAGCA---GCAATCTC--------------------------------------AGCAGCAAC-------------------------------------ACGA-------------------------GAAC---A-C----ATC-----------------------------------------------C
droEre2 scaffold_4820:6602104-6602327 - ACACGAAGCCATCGCCGCTGCGAGCCTCCA------CCAG--------------------------------------------------------------------------CAGCTGGCAGC-----T-------TAGCAATGCAGCGTTCAAGTCGCGTCTGCAACAGCAACAGCTACT------------------------------------------------GCAGCA------------GCACCAGCAACAGA------------------------------------------------------------------------------TACA--GCAGCAGCAGCAGCAGCAGCAG---------------------------------------------CACGAG-----------------------------------------------------------------------------------------------CAGCAGC---------------------A------------A---CA--------------GGAGCACCAGCAACAGGAGCTGCAGCAACAGCAG------CA----------------------------------------------------------GCAGCATCTGCAGCA---GCA--------------------------------------------------AC-------------------------------------ACGA-------------------------AAAC---G-C----ATC-----------------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AAACACAACAATCGCAACAACAAGCA-------ACAGCAGCAGC-----------------------------------------------------------------------TGATGATAGC-----G-------ATGAAATGGATC----------------------------------------------------------------------------------------------------------------------------------------AAAAACCAACAGCAG------CAAC---------------A-----------ACA------------------------------------TCATCATCATCAGCAGCAGCAGCAGCAGGAGGGGGAGCGGGAT-----------------------CATC------------------------------------------------------------------------AGC---------------------------------AT---CT-----------------------------GGAGCAGCAGCATCATCAT------CA----------------------------------------------------------TCAGCAGGTGGAGCA---TCTGGATC---------------CAA----GGCGACCAGCAA---------------------------A---------------------------CAAGTGCCAAAGAAACGTA-AAAGCGCC---TTC----ACC-------------------------------------------GAAGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................G-------ATGAAATGGATC----------------------------------------------------------------------------------------------------------------------------------------AAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGAGGGGGAGCGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................................................................................................................................................................................................................................................................................................................................................ACA------------------------------------TCATCATCATCAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17100010
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAGCAGCAGCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.10101000
.............................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
..........................................................................................................................................................................................................................................................................................................................................................................................CATCATCATCAGCAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
droVir3
AACAACAA---------C---A--------------GCA-CAAC------------AGCAAC---------------------------------------------------------------------------------------------------------------------------G---------------GCAGCATCA---------------------ACAACAGTAACAGCAAATA-----------------------------------CAGTAAT-----TCAA------------------CCACAACAGCAACAGCAAC---AACA-----TCATCAGCAGCAGCAGCA---------------------------------------------------G-----------------------CAGCAG-----------------------CAACAGTC------ATAA-------------A---------------TGC------------------AACTGCAACAACAACAACATTAGCTGCAGC--TA---------------TACA-----CAGCAACA-------------------------------------------------------GCGACAATGCT----GCAACAGCCACAGCAACTGCAACAGC-----------------------------------A---------AC-------------------------------------------------------------------------TGC----ACT-----------------------------------------------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------TACA-----CAGCAACA-------------------------------------------------------GCGACAATGCT----............................................................................................................................................................................................................2412.002000000000000000000000010000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACATTAGCT...........................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000002000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AAT-----TCAA------------------CCACAACAGCAACAGCAAC---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAATGCT----GCAACAGCCACAGC..............................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------TACA-----CAGCAACA-------------------------------------------------------GCGACAAT...................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................ACAGTAACAGCAAATA-----------------------------------CAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACATTAGCTGCAGC--TA---------------TACA-----CAGCA.....................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------A---------------TGC------------------AACTGCAACAACAACAAC..................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCAAATA-----------------------------------CAGTAAT-----TCAA------------------CCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................A--------------GCA-CAAC------------AGCAAC---------------------------------------------------------------------------------------------------------------------------G---------------GCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................CAAC------------AGCAAC---------------------------------------------------------------------------------------------------------------------------G---------------GCAGCATCA---------------------ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------CAGCAG-----------------------CAACAGTC------ATAA-------------A---------------TGC------------------AACTGCAAC...........................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACA-----CAGCAACA-------------------------------------------------------GCGACAAT...................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-------------------------------------------------------GCGACAATGCT----............................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................ATCA---------------------ACAACAGTAACAGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................TAACAGCAAATA-----------------------------------CAGTAAT-----TCAA------------------CCACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----GCAACAGCCACAGCAACT..........................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAC---AACA-----TCATCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.574000010000000000000000000000110000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AA------------------CCACAACAGCAACAGCAAC---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAAC---AACA-----TCATCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.402000000000000000000000000000010000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................A------------------CCACAACAGCAACAGCAAC---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAC---AACA-----TCATCAGCAGCAGCAGCA---------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.332000000000000000000000000001000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCAACAGCAAC---AACA-----TCATCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACATTAGCT...........................................................................................................................................................................................................................................................................................................................2030.331000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAC---AACA-----TCATCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.333000000100000000000000000000000000000101000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAC---AACA-----TCATCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.252001000000001000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CAACAGCAAC---AACA-----TCATCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAAC---AACA-----TCATCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................C---AACA-----TCATCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.213001000000000000000000000000000000200000000000000000000000000000
............................................................................................................................................................................................................................................................................................................A------------------CCACAACAGCAACAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAAC---AACA-----TCATCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.202000000000000010100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACTGCAACAGC-----------------------------------A---------AC-------------------------------------------------------------------------T.........................................................2150.201001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACAGCAAC---AACA-----TCATCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA---------------------------------------------------G-----------------------CAGCAG-----------------------CAACAGTC------..........................................................................................................................................................................................................................................................................................................................................................................................................2870.141000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAC---AACA-----TCATCAGCAGCAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................C---AACA-----TCATCAGCAGCAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.142000000100000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACA-----TCATCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.132001000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGCAAC---AACA-----TCATCAGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.131000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CCACAACAGCAACAGCAAC---A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................C---AACA-----TCATCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACA-----TCATCAGCAGCAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.071000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAAC---AACA-----TC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACA-----TCATCAGCAGCAGCAGCA---------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.051000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GCAGCA---------------------------------------------------G-----------------------CAGCAG-----------------------CAACAGT.................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACA-----TCATCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA---------------------------------------------------G-----------------------CAGCAG-----------------------CAA.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCA---------------------------------------------------G-----------------------CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CA-----TCATCAGCAGCAGCAGCA---------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCAGCAGCA---------------------------------------------------G-----------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
AACAGCAA---------C---AA-------GAG-CAACAGAAAA------------A-----------------------------------------------ACAGCAACAGCAGC----AG-CAATTGCAACAATAGGAAATGCAGCAA-----------------------------TG------------------------------------------------GCAACAGCAACAGCAGCAG-----------------------------------CAACAA-CA------G------A-----------------------------------------AGCAGCA---------------------------------------------------------G---CAGTAACACCAGCAAAACCAG-----CAGCA--------------------------------GCAATA---G-------------GAGCAGCAGCAGCAGCAGC---------------------A------------G---CA--------------GCAGCAGCAGCAACAGGAG---CAG----------------------------------------------------------------CAGCAAGAAGAGAAGCAACAGAAGCA---ACAGCAGC--------------------------------------A------------------------------------------------------------------------------------TCAG-----------------------------------------------TAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................CAACAGCAACAGCAGCAG-----------------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153300000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------G---CA--------------GCAGCAGCAGCAACAGGAG---C.........................................................................................................................................................................................................................................................................................2490.111100000
....................................................................................................................................................GCAA-----------------------------TG------------------------------------------------GCAACAGCAACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.061100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGGAG---C.........................................................................................................................................................................................................................................................................................20180.061100000
........................................................................................................ACAGCAACAGCAGC----AG-CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.............................................................................................................................................................................................................................................GCAACAGCAGCAG-----------------------------------CAACAA-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------GAGCAGCAGCAGCAGCAGC---------------------A------------....................................................................................................................................................................................................................................................................................................................................21200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGGAG---CAG----------------------------------------------------------------C......................................................................................................................................................................................................................18200.051100000
.........................................................................................................................................................................................................................................AACAGCAACAGCAGCAG-----------------------------------CAACAA-CA------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CA--------------GCAGCAGCAGCAACAGGA..............................................................................................................................................................................................................................................................................................21200.051100000
droGri2
CAG--------------C---A-----------ACAGCAGCAGC------------ATCAGA----------------------------------AGCACCAG---------------------CAGTTGCAG--------------------------------CAACGCAT---------------------------------------------------------------------------------------------------------------------------CCAA------------------CAACATCAGC------------AACTCC--AACA---------------------------G------------------CAACA-------------------------------------------------------------------------------------TC-------------------AA---CAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAACAACATTCGCATCAGA--AA---------------------------CAT------CAACAGCT------GC---------------ACGAGCTGCTCTCAGCGGGACCAAGGACACCA-----------------------------------------------------------A----------------TG------------A-------CGAGTGGCAGC-GGCGCAA-------------------------TGCC---TTC----GCC-----------------------------------------------GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAACAACATTC..............................................................................................................................................................................................................................................................................................................................2111.00110
................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------------------------------------------------------------TC-------------------AA---CAGCAGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................21190.05101
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAGCAAC....................................................................................................................................................................................................................................................................................................................................................23200.05110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAGCAACAACA....................................................................................................................................................................................................................................................................................................................................27200.05110
dp5
CAA--------------C---A-----------ACAGCAGCACC------------AGCAGC---------------------------------------------------------------------------------------------------------------------------AATAGCAGCAGCAGCGGCGGCGCCA---------------------ACAATAGCAGCAGTGGCAG-----------------------------------CAACAATCAACAGCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAACAACAACAACAACAACAGCAGCAGC--AACAACAACAGCAGCAA------------CAGCAGCAA------CAA------C----------------------------A---------------------GCAGCAGCAACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GCAGCCGCCGCAAGTTCGTACCTATGGAACGATGAAGGTGCC---TTC----GTC-----------------------------------------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTATGGAACGATGAAGGTGC..............................................................2312.0020200000000
...........................................................................................................................................................................................................................................TAGCAGCAGTGGCAG-----------------------------------CAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTTCGTACCTATGGAAC.........................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGTTCGTACCTATGGAACG........................................................................2311.0010100000000
..............................................................................................................................................................................................CAGCAGCAGCGGCGGCGCCA---------------------ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................C---------------------------------------------------------------------------------------------------------------------------AATAGCAGCAGCAGCGGCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCAAGTTCGTACCTA...............................................................................2311.0010100000000
.............................................................................................................................................................................................GCAGCAGCAGCGGCGGCGCCA---------------------ACAATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC--------------------------------------A---------------------------GCA------GCAGCCGCCGCAAG.........................................................................................2411.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGATGAAGGTGCC---TT........................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAAGTTCGTACCTATGGA...........................................................................2111.0010100000000
.........................................................................................................................................................................................AATAGCAGCAGCAGCGGCGGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................GCAGCAGCAGCGGCGGCGCCA---------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC--------------------------------------A---------------------------GCA------GCAGCCGCCG.............................................................................................1930.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC--------------------------------------A---------------------------GCA------GCAGCCGCC..............................................................................................1960.1710100000000
.....................................................................................................................................................................................................................................................................................................................GC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAAC..............................................................................................................................................................................................................................................................................................................................................2660.1710000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAGC.........................................................................................................................................................................................................................................................................................................................21200.1530030000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACAACAACAGCAGC.........................................................................................................................................................................................................................................................................................................................2690.1110100000000
.....................................................................................................................................................................................................................................................................................................................GC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGC....................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAACAAC...........................................................................................................................................................................................................................................................................................................................................22200.1020011000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAACAACA..........................................................................................................................................................................................................................................................................................................................................23200.1020110000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------CAACAGCAGCAACAACAACA.......................................................................................................................................................................................................................................................................................................................................22200.1020101000000
.........................................................................................................................................................................................................................................................................................................GCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAAC.......................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GC.....................................................................................................20200.1020020000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAA------------CAGCAGCA...............................................................................................................................................................................................................................................................................20200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA------CAA------C----------------------------A---------------------GCAGCAGCA...................................................................................................................................................................................................21200.1020200000000
...........................................C------------AGCAGC---------------------------------------------------------------------------------------------------------------------------AATAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC--AACAACAACAGCAGCAA------------C......................................................................................................................................................................................................................................................................................28110.0910001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC--AACAACAACAGCAGCAA------------C......................................................................................................................................................................................................................................................................................26120.0810001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC--AACAACAACAGCAGCAA------------CAG....................................................................................................................................................................................................................................................................................24130.0810100000000
......................................................................................................................................................................................................................................................................................................ACAGCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAAC.......................................................................................................................................................................................................................................................................................................................................................26140.0710010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AACAACAACAGCAGCAA------------CAGCA..................................................................................................................................................................................................................................................................................24140.0710010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAACAAC--------------------------------------A---------------------------GCA------GCAGCC.................................................................................................19180.0610010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAACAACAACAACA.................................................................................................................................................................................................................................................................................................................................25190.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------C----------------------------A---------------------GCAGCAGCAACAACA---AC........................................................................................................................................................................................20200.0510001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------C----------------------------A---------------------GCAGCAGCAACAACA---..........................................................................................................................................................................................20200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAA------C----------------------------A---------------------GCAGCAGCAACAACA---AC........................................................................................................................................................................................25200.0510010000000
....................................................................................................................................................................................................................................................................................................................AGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGC....................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC--AACAACAACAGCAG......................................................................................................................................................................................................................................................................................................21200.0510100000000
...........................................................AGC---------------------------------------------------------------------------------------------------------------------------AATAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------AA---------------------CAACAGCAGCAACAACAACA.......................................................................................................................................................................................................................................................................................................................................23200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................CA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCA................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAA------C----------------------------A---------------------GCAGCAGCAA..................................................................................................................................................................................................20200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------CAA------C----------------------------A---------------------GCAGCAGCAACAA...............................................................................................................................................................................................22200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAA------------CAGCAG.................................................................................................................................................................................................................................................................................21200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAGCAGCAA------CAA------C----------------------------A---------------------GCAGCA......................................................................................................................................................................................................23200.0510000100000
..........................................................................................................................................................................................................................................................................................................CAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CA.........................................................................................................................................................................................................................................................................................................................................................20200.0510000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CAGCAGCAA------CAA------C----------------------------A---------------------GCAGC.......................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC--AAC.................................................................................................................................................................................................................................................................................................................19200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------A---------------------GCAGCAGCAACAACA---ACA.......................................................................................................................................................................................20200.0510010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAACAGCAGC.........................................................................................................................................................................................................................................................................................................................23200.0510010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGC--AACA................................................................................................................................................................................................................................................................................................................23200.0510000100000
......................................................................................................................................................................................................................................................................................................................................A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCA................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCAACAAC...........................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAGCAGCAGC--A...................................................................................................................................................................................................................................................................................................................21200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA---ACAACAAC--------------------------------------A---------------------------GCA------G......................................................................................................22200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAA------C----------------------------A---------------------GCAGCAGCA...................................................................................................................................................................................................19200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------GCAGCAGCAACAACA---ACAACA....................................................................................................................................................................................22200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAACAACAACAA...................................................................................................................................................................................................................................................................................................................................24200.0510001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------C----------------------------A---------------------GCAGCAGCAACAACA---ACA.......................................................................................................................................................................................21200.0510000001000
......................................................................................................................................................................................................................................................................................................................C---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCA...................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAGCAGC--....................................................................................................................................................................................................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACA---ACAACAAC--------------------------------------A---------------------------GC..............................................................................................................24200.0510010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGC--AACAACAAC...........................................................................................................................................................................................................................................................................................................21200.0510010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GCAGC..................................................................................................24200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGC--AACAACAACAG.........................................................................................................................................................................................................................................................................................................23200.0510010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACAACAACA..............................................................................................................................................................................................................................................................................................................................21200.0510100000000
............................................................................................................................................................................................AGCAGCAGCAGCGGCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.......................................................................................................................................................................................................................................................................................................CAGCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAA........................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
...................................................................................................................................................................................................................................................................................................................CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------C------------------------------------------------------------------AA---------------------CAACAGCAGCA................................................................................................................................................................................................................................................................................................................................................26200.0510010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GCAG...................................................................................................23200.0510000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGC--AACAACC.............................................................................................................................................................................................................................................................................................................26200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAA------------CAGCA..................................................................................................................................................................................................................................................................................22200.0510001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC--AACAACAAC...........................................................................................................................................................................................................................................................................................................25200.0510010000000
....................................................................................................................................................................................................................................................................................................CAACAGCAG------CAGC---------------A-----------GCA------------------------------------ACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CAGCAGCAA------CAA------C----------------------------A---------------------GCAG........................................................................................................................................................................................................19200.0510100000000
..................................................................................................................................................................................................................................................................................................ATCAACAGCAG------CAGC---------------A-----------GCA------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------C----------------------------A---------------------GCAGCAGCAACAACA---AC........................................................................................................................................................................................21200.0510010000000
droPer2
AACAGCAG---------C---A--------------CCAGCAGC------------AATAGC---------------------------------------------------------------------------------------------------------------------------A------GCAGCAGCGGCGGCGCCA---------------------ACAATAGCAGCAGTGGCAG-----------------------------------CAACAATCAACAGCAG------CAGC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------CAACAACAACAACAACA--------------------ACAACA---G-------------CAGCAACAACAACAGCAGCAACAA---------------------CA-----------------------------GCAGCAACAACAACAG---CAG----------------------------------------------------------------CAACAACAACAGCAGCAACAACAACA---ACAACAAC--------------------------------------A---------------------------GCA------GCAGCCGCCGCAAGTTCGTACCTATGGAACGATGAAGGTGCC---CTC----GTC-----------------------------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................AATAGC---------------------------------------------------------------------------------------------------------------------------A------GCAGCAGCGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGTTCGTACCTATGGAAC.........................................................................2212.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATGGAACGATGAAGGTGCC---CTC----GT.................................................2811.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGTTCGTACCTATG.............................................................................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC--------------------------------------A---------------------------GCA------GCAGCCG................................................................................................1940.251001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACAACA................................................................................................................................................................................................22200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G-------------CAGCAACAACAACAGCAGC......................................................................................................................................................................................................................................................................................................................................................................22200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------GCAGCAACAACAACAG---CAG----------------------------------------------------------------C......................................................................................................................................................................................................................22200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------------------------------------CAACAACAACAGCAGCAACA...................................................................................................................................................................................................22200.051001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------GCAGCAACAACAACAG---CAG----------------------------------------------------------------.......................................................................................................................................................................................................................20200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---CAG----------------------------------------------------------------CAACAACAACAGCAGC.......................................................................................................................................................................................................22200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACAA---------------------CA-----------------------------.............................................................................................................................................................................................................................................................................................................22200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................22200.051001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA--------------------ACAACA---G-------------CAGCAACAACA..............................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................................................................................................................................................................................................................GC---------------A-----------GCA------------------------------------ACAA--------------------------------------------------------------CAACAACAACAACAA......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------CAACAACAACAACAACA--------------------ACAACA---G-------------CAG......................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
droAna3
CAT--------------C---AA-------GCA-CAACAACAAC------------ATCAGC----------------------------------AGCAGCAG---------------------CAATCACAA--------------------------------CAACATAAGCAGCAACA------------------------------------------------GCAGCAGCACCAGCAGCAG------------------------------------------------------------------------------C------------AACA--TCTTCAGCAGAAGCAGCAACA---------------------------------------------------G-----------------------CAGCAGCAACATCAACCAACACAGCAGCA--------GCAATCGCAG-GCACATCAGCAACTCCAGGCTCATCAGCAGCAACAT---------------------CT-----------------------------CCATCAGCAACAGCAG---CAG----------------------------------------------------------------CAACACCACCATCAGCAGCAGCAGCA---ACAGCAAC--------------------------------------A------GC-------------------------------------------------------------------ATC---ATC----ACCAG-------------------------------------------AAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAACAGCAG---CAG----------------------------------------------------------------CAA....................................................................................................................................................................................................................2170.141001000
....................................................................................................................................................................................ACA------------------------------------------------GCAGCAGCACCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCA---ACAGC.....................................................................................................................................................................................19200.102020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCA---ACAGC.....................................................................................................................................................................................21200.102020000
......................................AACAAC------------ATCAGC----------------------------------AGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAG---CAG----------------------------------------------------------------CAACAC.................................................................................................................................................................................................................19140.071010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCA---ACAGCC....................................................................................................................................................................................22200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................AGCAACA---------------------------------------------------G-----------------------CAGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
......................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA---------------------------------------------------G-----------------------CAGCAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
CAG--------------C---A-----------GCAGCAACAAC------------AGCAGC----------------------------------AGATGCAG---------------------CTGGCGCAG--------------------------------CA---------------------------------------------------------------GCAACAGCA------------------------------------------------------------G------G------------CTCTCCAGC------------AACACC--ACCAGC---A------------------------------------------------------C------------------CTCCAA-----CAGCA---------------------------------------------------------------G---CACCAGC---------------------AGCAACAGCAACAACAACAGCAGCAGC--AA---------------------------CAA------CAACAGCA-------------------------------------------------------------GCAGCAGCA------GAAGCTGAAGCAGTCGCAGGCGGCAAGTGCGGCGGCCAACAACAAGG---------------------------CCA------CCAATCTCACCAAGGACTCGCCCAAGCAAAAGA-GC---AGC---GCC----GCC---------------------GAG-------------------GAGGASizeHit CountTotal NormTotal
No Reads
droKik1
ACAC--CA---CTGCCGC---AG-------CA-GCAGCAGCAGCCGCCGCCCATGAATCAGATGCATCAGCCGTACCCTCACCCCGGATTTTCAAT--------TCATCAACAGCAGC----AG------------------------------------------------CAGCAACAACAACA---------------------------------------------GCATCTACA------------------------------------------------------------GCAGCAGCAACAACAGCATT---------------------TACA--GCAGCAGC------------AACAACAGCA------------------------------------------------------TT-----TACAGCAGCA-----------------------------------------G-------------CAGCATTTACAGCAGCAGCAACAA---------------------CA------G---CA--------TCTA---------------------------------------------------C----------------------------AGCAGCAGCAACAACAGCATTTACAGCAGCAGCAGCA---GCAGCATT--------------------------------------T------------------------------------------------------------------------------------ACAG-----------------------------------------------CAGCSizeHit CountTotal NormTotal
No Reads
droFic1
AAC--------------C---G-----------GCAGCAACATCCACTGCCCAA-------------------------------------------------------------------TAGC--------------------------------------CATCAACTGCAACAGCAGCA------------------------------------------------GCAGCA------------ACA---------------------------------------------ACAG------C---------------AGCAGC------------AACA--TCAGCAGCAGCAGCAACA----------------------------------------------------------------------------------------------------------------------------TC-------------------AG---CAGCAGCAACAT---------------CA------------T---CA--------CCAGCAGCATCA---------GCAG---CAGCAGCAGCAT------CATCATCAGATGCAGCACCATCTAAACCACC---ACCAGACGGCGCCAAGGAAACCA-----------------------------------------------------------C----------------CGA-----------AAAA-------------GC-ATAGCGA-------------------------GATC---TCC----AC------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droEle1
AACACCAG---------C---A-----------ACAGCAGCAAC------------ATCAGC---------------------------------------------------------------------------------------------------------------------------A------ACAG---------CA------GCAACATCTGCAGCAGCAGCAACATCA------------------------------------------------------------G------C------------AACAGCAGC------------AACACC--ATCAGC---AGCAACAACA---------------------------------------------------G-----------------------CAGC---------------------------------------------------------------AA---------------------CACCATCAGCAGCAGCAGCAACACCATCAGCAGCAGC--AA---------------------------CAC------CATCAGCA------GC---------AGCA----------------------GCAGCAACACCACCAACAGCAACAGCAGCA---GCAGCAAC-----------------------------------A---------AC--------------------------------------------------------------------T--------C--ACCAGCAATATGAGCCTGCTGACCATCAAAGGCGGTGGTCGTTACCTTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
CGA-G------------C---A-----------GCAGAGGCGGC------------AGCACC---------------------------------------------------------------------------------ATGCTGTGGAAACGATAGAACAGAAGCAGCAAAAGCAACG------------------------------------------------CCACCA---------------------------------------------------------------T------------------CCCCAGCAGC------------A-----------------------------------GCAG------------------CAACATCAGCAGCAGCGGCAA-----------------------CATC---------------------------------------------------------------AG---------------------CAGCATAACCCACAGCAGCAACATCATTTGCAGCAGC--AA---------------------------CAT------CAT---AT------AC---------AGCAGCA-------------------ACAGCAACTACATGCACAGG------A---GCAACATCAGC-----------------------------------A---------AC------------------------------------------------------------------CGCATGC---ACAG-----------------------------------------------GA-GSizeHit CountTotal NormTotal
No Reads
droBia1
AGCAGCAA---------C---A--------------GCCGCACC------------ATCAGC---------------------------------------------------------------------------------------------------------------------------A------GCAG---------CAGCA------ACA------------GGCGCA------------------------------------------------------------CCAT------C------------AGCAGCAGC------------AACTCC--ACCAGC-----------------------------------------------------------------------------------AGCAGCAACA-----------------------------------------G-------------CCACACCACCAGCAGCAGC---------------------CGCAGCAGCACCATCAACAGCAGCAGC--AA---------------------------CTC------CACCAGCA-------------------------------------------------------------CCAGCAGCACCA---GCAG--------------------------------------------------C--------------------------------------------------------------------T--------C--GCCAGCAACATGAGCCTGCTGACCGTGAAGGGCG---GCCGCTACCTTTGGSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAACAA---------C---T--------------ATTGCTGC------------AAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCGCAGC------TAATGAAAT-------CA--AATCGAATGCCA------CAGC---------------A-----------GCA------------------------------------ACAT------------------CAACACCAGCAGCAGCTGCAG-----------------------CAGCTG-----------------------CAACAGCA------ACGCC----------------------------AGC-----------------------------------------------------------------AACTACAACAGCAACATCAGCAA------CT------AC---------AACAGCA----------------------------------AAAGCAACTAAA---CGAACAAGAAC-----------------------------------C---------ACTGAGAGGCCAGTGTA-------CAGATACCCGA-TAAACGA-------------------------GGGC---TCC----TTC-----------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEug1
CAA--------------C---A-----------ACAGCAACAAC------------ATCAGC----------------------------------AACAACAG---------------------CATC-----------------------------------------------AGCAGCA------------------------------------------------ACAACACCA---------------------------------------------------------CCAG------C---------------AGCAGC------------AACACC--ACCAACA---------------------------------------------------------G-------------------------------------------------------------CAGCA------ACACC-------------------AC---CAACAGCAACAA---------------------CA------T---CT--------ACAACAGCAGCAGCAGCAA------------CACCA----------------------------------------------------------------------GCAGCAGCAGCA---GCAACATCAAC-----------------------------------A---------AC--------------------------------------------------------------------T--------C--ACGAGCAACATGAGCATGTTGACCGTTAAAGGCG---GTCGTTACCTTTGGSizeHit CountTotal NormTotal
No Reads
dm3
CAG--------------C---A-----------TCAGCAGCAGC------------AACACC---------------------------------------------------------------------------------------------------------------------------A------------------------------------------------GCA------------GCACCAGCAGCAGC------------------------------------------------------------------------------AACA--CCAGCAGCAGCAGCACCAGCAACACCAGCA------------------------------------------------------GC-----AACAGCAGCAG------------------------------------------------------CAACACCAACATCAGCAGC---------------------AGCAACAGCAACACCTTCAGCAGCAGC--AA---------------------------CAC------CACCAGCT------GC---------AGCAGCA----------------------------------ACAGCAGCAGCA---GCAGCATCAAC-----------------------------------A---------AC--------------------------------------------------------------------T--------C--GCCAGCAACATGAGCCTGCTGACCGTCAAAGGCG---GCCGTTACCTTTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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....................................GCAGCAGC------------AACACC---------------------------------------------------------------------------------------------------------------------------A------------------------------------------------GCA------------GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---------------------AGCAACAGCAACAC...................................................................................................................................................................................................................................................................................................................................19180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCA---GCAGCATCA....................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
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............................................................................................................................................................................................................................................A------------GCACCAGCAGCAGC------------------------------------------------------------------------------AACA--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................CAGCAGCAGC------------------------------------------------------------------------------AACA--CCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---GCAGCATCAAC-----------------------------------...............................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
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droSim2
CAAAGCAG---------C---AG-------GCG-AAGGAGGAGC------------A---------------------------------------------------------------------------------------------------------------------------------------GCAG---------CAACAGCAGCCAGAGTTGCAGCAACATCAGCA------------------------------------------------------------GCAG------CAACAGCAGCAAC---------------------GACA--GCAGCAGCAGCAACATCAACAG---------------------------------------------C-----------------------------------------------------------------------------------------------AA---------------------CAGCATCAGCA------------A---CT--------------GCAGCAGCAGCAACAGCAGCAGCAACAACAGCAA------CT------GA---------AGCAACA----------------------------------ACATCAGCCCGA------------CC--------------------------------------AGCAGCAAC---------------------------------T------------------------------------------GCAG-----------------------------------------------AAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................GGAGC------------A---------------------------------------------------------------------------------------------------------------------------------------GCAG---------CAACAGCAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200002000000000000
.........................................................................................................................................................................................................................................AGCA------------------------------------------------------------GCAG------CAACAGCAGCAAC---------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.75300000300000000000
.................................................................................................................................................................................................................................GCAACATCAGCA------------------------------------------------------------GCAG------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAAC......................................................................................................................................................................................................................................................................................20200.05100000000001000000
droSec2
AGCAGC-----------------------------AGATGCAAC------------AGATGC---------------------------------------------------------------------------------------------------------------------------A------GCAG---------CA------------------------------------------GCA---AC---AGATGCAGCAAATGAACTGCAACTACAACTACCAACAGGAG------CAGC---------------A-----------GCA------------------------------------GCTC--------------------------------------------------------------C------------------------------------------------------------------ATCATCAGCAGC---------------------AGCTTCAGC---AT---CA--------------GCAGCAGCAG--GCTAAAATCCC---------------------------------------------AAC----------------------------------------ACCA---GCAG---------------GTTACAA----CACAACCAACAA---------------------------CAATGT-AC--------------------------CGATGACACCC--------AC---AAC----GTC-------------------------------------------AGAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................AAC------------AGATGC---------------------------------------------------------------------------------------------------------------------------A------GCAG---------CA------------------------------------------GCA---AC---AGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---------------------AGCTTCAGC---AT---C...............................................................................................................................................................................................................................................................................................................................1830.3310010
droYak3
ACACGAAGCCATCGCCACTGCGAGCATCCA------CCAG--------------------------------------------------------------------------CAGCTGGCAGC-----T-------TAGCAATGCAGCATTCAAGTCGCGCCTGCAACAGCAACAGCTACT------------------------------------------------GCAGCA------------GCACCAGCAACAGA------------------------------------------------------------------------------TACA--GCAGCAGCAGCAGCACGAGCAG--------------------------------------------------------------------------C------------------------------------------------------------------AG---------------------CAGCAACAGCA------------A---CA--------------GGAGCATCAGCAACAGGAGCTGCAGCAACAGCAA------CA----------------------------------------------------------ACAGCAACAGCAGCA---GCAATCTC--------------------------------------AGCAGCAAC-------------------------------------ACGA-------------------------GAAC---A-C----ATC-----------------------------------------------CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---GCAATCTC--------------------------------------AGCAGCAAC-------------------------------------..............................................................................................2130.33100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CA----------------------------------------------------------ACAGCAACAGCAGC..............................................................................................................................................................................................21200.05100100000000
droEre2
ACACGAAGCCATCGCCGCTGCGAGCCTCCA------CCAG--------------------------------------------------------------------------CAGCTGGCAGC-----T-------TAGCAATGCAGCGTTCAAGTCGCGTCTGCAACAGCAACAGCTACT------------------------------------------------GCAGCA------------GCACCAGCAACAGA------------------------------------------------------------------------------TACA--GCAGCAGCAGCAGCAGCAGCAG---------------------------------------------CACGAG-----------------------------------------------------------------------------------------------CAGCAGC---------------------A------------A---CA--------------GGAGCACCAGCAACAGGAGCTGCAGCAACAGCAG------CA----------------------------------------------------------GCAGCATCTGCAGCA---GCA--------------------------------------------------AC-------------------------------------ACGA-------------------------AAAC---G-C----ATC-----------------------------------------------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG---------------------------------------------CACGAG-----------------------------------------------------------------------------------------------CAGC.........................................................................................................................................................................................................................................................................................................................................................................1930.3310000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAG------CA----------------------------------------------------------GCAGCATC....................................................................................................................................................................................................20200.0510000100

Generated: 05/18/2015 at 02:24 AM