ID:

dwi_1749

 Coordinate:

scf2_1100000004585:8382894-8383024 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -3.4 -3.4

Flybase annnotation

CDS [Dwil\GK24860-cds]; exon [dwil_GLEANR_8998:1]; exon [dwil_GLEANR_8998:2]; CDS [Dwil\GK24860-cds]; intron [Dwil\GK24860-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------##################################################
TTGTCTGCAGTTGCGGTGAGGCCGAAATCTGTTGGACCATGCAACGTGAAGTCTAAACTTTATATAAAATCAGTCACATCATCACAAGCATAATTCATTAACAAAGGAAAAGGATAAAGAAAACATTATCAGTTGAACTTCACTCGAAACTCACTCGAAAATTGAAATTGGATTTTGGAAAATAAAAGAAAAAAGAGCAAAAAGAAACAAAATGGATCAACATAGCGCTGA
***************************************************************........................................(((..((..(((((........)))))..))...)))...............**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 M020
head
 V117
male body
.............................................................................................................................................................................................................AACAAAATGGATCAACATAGC..... 21 0 1 2.00 2 2 0 0 0
...................................................................................................................................................................................................AGCAAAAAGAAACAAAATGGAT.............. 22 0 1 1.00 1 0 1 0 0
........................................................................................................................................ACTTCACTCGAAACTCACT............................................................................ 19 0 1 1.00 1 0 1 0 0
.............................................................................................................................................................................................................AACAAAATGGATCAACATAGCGCTG. 25 0 1 1.00 1 1 0 0 0
.......................GAAATCTGTTGGACCATGCAACGT........................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................AATTGAAATTGGATTTTGGAAAATA............................................... 25 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................TTTGGAAAATAAAAGAAAAAAGAGC................................. 25 0 1 1.00 1 1 0 0 0
.......................GAAATCTGTTGGACCATGCAAC.......................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
............................................................................................................................ATTATCAGTTGAACTTCACTCGAAACT................................................................................ 27 0 1 1.00 1 1 0 0 0
..............................GTTGGACCATGCAACGTGAAGTCT................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
...................................................................................................................................GTTGAACTTCACTCGAAACTCACT............................................................................ 24 0 1 1.00 1 0 0 1 0
............................................................................................................................................................GAAAATTGAAATTGGATT......................................................... 18 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................AAAAGAGCAAAAAGAAACA...................... 19 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................ATAAAAGAAAAAAGAGCAA............................... 19 0 1 1.00 1 1 0 0 0
...............................................................ATAAAATCAGTCACATCATCACAAGCAT............................................................................................................................................ 28 0 1 1.00 1 1 0 0 0
................................................................................................................................................................ATTGAAATTGGATTTTGGA.................................................... 19 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................TTGAAATTGGATTTTGGAAA.................................................. 20 0 1 1.00 1 1 0 0 0
.......CAGTTGCGGTGAGGCCGAAATCTGTTG..................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
..........................................................................................................................ACATTATCAGTTGAACTTCACTCGAAAC................................................................................. 28 0 1 1.00 1 1 0 0 0
...........................................................................................................................CATTATCAGTTGAACTTCACT....................................................................................... 21 0 1 1.00 1 0 0 1 0
...............................................................................................CATTAACAAAGGAAAAGGAT.................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................GACATAATGGATCAACATA....... 19 2 9 0.11 1 1 0 0 0
............................................................................................................................................................................................................GAACATAATGGATCAACA......... 18 2 20 0.05 1 1 0 0 0
......................CGAAATCTGTTGGGCTCTG.............................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0
..................................................................................................................................................................TGAAAGTGGATTTAGTAAAAT................................................ 21 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

AACAGACGTCAACGCCACTCCGGCTTTAGACAACCTGGTACGTTGCACTTCAGATTTGAAATATATTTTAGTCAGTGTAGTAGTGTTCGTATTAAGTAATTGTTTCCTTTTCCTATTTCTTTTGTAATAGTCAACTTGAAGTGAGCTTTGAGTGAGCTTTTAACTTTAACCTAAAACCTTTTATTTTCTTTTTTCTCGTTTTTCTTTGTTTTACCTAGTTGTATCGCGACT
****************************************************************************........................................(((..((..(((((........)))))..))...)))...............*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004585:8382844-8383074 + dwi_1749 TTGTCTGCAGTTGCGGTGAGGCCGAAATCTGTTGGACCATGCAACGTGAAGTCTAA--------------------------------------------------------------AC--TTT---ATA-------------------------------------------------TAAAATCA----GTCACATCATCACAAGCATAATTCAT------------------------------TAACAAAG--------GAAAAGGATAAAGAAAACATT----ATCAGT-TG--------------AACT---------------------TCACTCGAAACTCACTCGAAAATTGAAATTGGATTTTGGAAAATAAAAGAAAAAAGAGCAAAAAGAAAC-AAAATGGATCAACATAGCGCTGA
droVir3 scaffold_12963:8581197-8581434 + TTGTCTGCAGTTGCGGCGAGGCCGAAATCTGTTGGACTATGCAGCGCGAGGTTTAGACAAAAGGATCAGAGACCAACTGACAGCCACAACTCAAATCCCAAATCCAAAGCCAACCAAATC-AGTTT--ATC-------------------------------------------------TTTGATCATCTCGTCATCTC----------------GTCACCATC-------AA-CAA------------------------------------C-AAGTTC-------AGTATAAATCACGATACCTTT----------------------GCCAAGCAG--TACATC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGACCAGCACAGTGCGGA
droMoj3 scaffold_6500:1193299-1193476 + TAGTTTGTAGCTGCGGCGAAGCGGAAATCTGTTGGACAATGCAGCGCGAGGTCTAA--------------------------------------------------------------CGAAGTT---GGAAAGTTTGATTCGAAGCACATTAAGA--------------------------AAAC--CTCAGTCAAAAT----------------------ACCGATCATCAATCAACCA--------------------------------------ATC-------ATCAAC-TC---------------------------------------------ATCTTT--------------------AT-CAA--------------------A----TCAAGA-AATATGGATCAGCATAGCGCAGA
droGri2 scaffold_15252:11776831-11777039 + TTGTCTGCAGTTGCGGCGAGGCCGAAATCTGTTGGACTATGCAACGTGAGGTTTAA--------------------------------------------------------------AA-AAA---------------------------AAAAAAAAACTAAGAAAAAAAACTCATC-TTCGATCA--TCATCATCTC----------------------AACAAACATTTGCTGAGTATACT------------------------------------T-------ATCATC-AGA-----------CGAACAAAATAAA---ACTAAAAAAAAAAACT-AAATAA--------------------AT-AAA--------------------ATA-----ACA-AAAATGGATCAGCATAGTCCCGA
dp5 4_group4:1566964-1567150 + dps_1659 TCATCTGCAGTTGCGGTGAGGCCGAGATCTGCTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TC--ATT---GCG-------------------------------------------------C-AAATCACCCCAAT---TC----------------GTCATCATCCGCCATCATTCA------------AGCAAAT------C-ATATAAGCAAG-GAACTT-------GACATC-GAT--------------A---------TTG------AACAAACTCCCAAAAGG--------------------AT-T-----------------------AG-----GCA-AAAATGGATCAGCACAGTGCGGA
droPer2 scaffold_10:571507-571693 + dpe_612 TCATCTGCAGTTGCGGTGAGGCCGAGATCTGCTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TC-ATTT---CGC---------------------------------------------------ATATCACCCCAAT---TC----------------GTCATCATCCGCCATCATTCA------------AGCAAAT------C-ATATAAGCAAG-GAACTT-------GACATC-GAT--------------A---------CTG------AACAAACTCCCAAAAGG--------------------AT-T-----------------------AG-----GCA-AAAATGGATCAGCACAGTGCGGA
droAna3 scaffold_12916:13679904-13680093 + TCACCTGCAGTTGCGGCGAAGCTGAAATCTGTTGGACCATGCAGCGTGAGGTCTAGGC------------------------------------------------------------TT-CATT---GAC-----------------------------------------------AGAGAGA--------TCACATC----------------------GTCAAGCGTCAGATAACTAAATTCGAAAGCACCA--------GG-----CAAG-GAATTC-------CACAAC-GAA---------------------------------AT-ACTAACTCGAAATT--------------------AT-AAG-------------------GCAG--TCAAAA-AATATGGATCAACACAGCGCGGA
droBip1 scf7180000396535:649555-649732 + TCACTTGCAGTTGCGGCGAAGCTGAAATCTGTTGGACCATGCAGCGTGAGGTCTAGAC------------------------------------------------------------TT-CATT---G-------------------------------------------------------A--------TCACATT----------------------GTCAAGCGTCAGATAACTAGAATCGAAAGCACCA--------GGA-----AAG-GAATTC-------GACAAC-GCA---------------------------------AT-ACTAACTCGAAATT--------------------AT-AAG--------------------CAG-----GCA-AATATGGATCAACACAGCGCAGA
droKik1 scf7180000302271:173397-173593 + TTGTCTGCAGTTGTGGCGAGGCCGAGATCTGTTGGACTATGCAGCGTGAGGTGTAA--------------------------------------------------------------AT-CGTAT-ATGT-------------------------------------------------TGCGATCACACTGTCACT----------------------------------TGAAAACTTGAAACGAAAGAACAACAAGGCTAGGCGAGGCAAG-GAATTC-------GGCAA----A---------------------------ACCCAACAAACAAACTCGAAATT--------------------AT-CAG--------------------CAG-----GCG-AAAATGGATCAGCACAGCGCGGA
droFic1 scf7180000453842:1200159-1200358 - TTGTCTGCAGTTGCGGCGAAGCTGAAATTTGTTGGACTATGCAGCGTGAGGTGTAA--------------------------------------------------------------TT-CGCTAATTGC-------------------------------------------------GGGGATCACACTGTCACATC----------------------GTCAAGCATCAGGCAACTGGAAACGAAAGCACAA--------GGAAAGGCAAG-GAACTC-------GGCATC-GTA---------------------------------A-----CTCTCGAAATT----AGG-------AA----AT-CAG--------------------CAG-----GCTCAAAATGGATCTCCATAGCGCGGA
droEle1 scf7180000491273:181031-181219 - TTGTCTGCAGTTGCGGAGAGGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-AGTT---GGC-------------------------------------------------CGGAATCACACTGTCACACC----------------------GTCA-------AGCAACTGGAAACGAAAGCACAA--------GGAAAGGCAAG-GAATTC-------GATATT-GTA---------------------------------ACGAAGCACTCGAAATA--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCACCACAACGCGGA
droRho1 scf7180000777055:120497-120692 + TTGTCTGCAGTTGCGGCGAGGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GAA-------------------------------------------------AGGGATCACACTGTCACACT----------------------GTCAAGCATCAGGCAACTGGAAACGAAAGCACAA--------GGAAAGTCAAG-GAATTC-------GGCATT-GTA---------------------------------ACGAAACTCTCGAAATT--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCACCATAACGCCGA
droBia1 scf7180000302261:477478-477673 + TTGTCTGCAGTTGCGGCGAGGCCGAGATCTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-TAGTC--GAC-------------------------------------------------CGGAATCACACTGTCACATC----------------------GTCAAGCGTCAGACAACTGGAAACGA-AGCACAA--------GGAAAGGCAAG-GAATTC-------GGAATT-GTA---------------------------------ACGAAACTCTCGAAATT--------------------AT-CAG--------------------AAG-----GCT-AAGATGGATCCCCACAGCGCGGA
droTak1 scf7180000415204:97084-97271 - TTGTCTGCAGTTGCGGCGAGGCCGAGATTTGCTGGACCATGCAGCGTGAGGTTTAA--------------------------------------------------------------TT-GGCT---AGC-------------------------------------------------CGGGATCACACTGTCAAA--------AATAAGCTTCAT-------AAGCATCAGACAACTGGA-----AAGCACAA--------GGAAAGTCAAG-GAAACC-------C------------------------------------------------AACTCGAAATTAACTAGA-----------------AA--------------------AAG-----GCT-AAAATGGATCCACATAGCGCGGA
droEug1 scf7180000409005:932039-932232 + TTGTCTGCAGTTGCGGTGAGGCCGAAATTTGTTGGACTATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-TGTG---AAC-------------------------------------------------CAAGTTCAAACTGTCA--TC----------------------GTCAAACGTCAGGCAACTGGAAACTAAGGCACAA--------GGAAAGACAAG-GAAGTC-------AATATT-GTA---------------------------------ACGAAACTCTCGAAATT--------------------AT-CAG--------------------CAA-----GCC-AAAATGGATCCCCACAGTGCTGA
dm3 chr2L:5046920-5047123 + TTGTCTGCAGTTGCGGCGAAGCCGAAATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---TGA-------------------------------------------------TGAGATCACACTGTTATAGC----------------------GTCAAAGATCAGGCAACTGGCAGCGAAAGCAAAA--------GAAGCGGAAAAGGAATTCGGAATTCGGAATT-GTA---------------------------------GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAA-----GCT-AAGATGGATCCACATAGTGCGGA
droSim2 2l:4860287-4860490 + TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACGGTTATAGC----------------------GTCAAGGATCAGGCAACTGGAAGCGAAAGCAAAA--------GAAGAGGAAAAGGAATTCGGAACTCGGAATT-GTA---------------------------------GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGGATCCACATAGTGCGGA
droSec2 scaffold_5:3133549-3133752 + dse_1396 TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------AGAGTTATAGCTGTTATAGC----------------------GTCAAAGATCAGGCAACTGGAAGCGAAAGCAAAA--------GAAGAGGAAAAGGAATTCGGAACTCGGAATT-TTA---------------------------------GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGGATCCACATAGTGCGGA
droYak3 2L:10478519-10478714 - dya_279 TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GAA-------------------------------------------------TGAGATCACACTGTCACATC----------------------GTCAAACATCAGGCAACTGGAAACGAAAGCAAAC--------GGAAAGGAAAG-GAACTC-------GGCATT-GTA---------------------------------GAGAAAATCTCGAAATA--------------------AT-CAG--------------------CAG-----GCT-AAGATGGATCCACATAGTGCGGA
droEre2 scaffold_4929:5125969-5126164 + der_1262 TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACTGTCATATC----------------------GTCAAACATCAGGCACCTGGAAACGAAAGCAAAA--------GGAAAGGAAAG-GAATTC-------GTCATT-GTA---------------------------------GAGAAAATCTCAAACTA--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCCACATAGTGCGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTGTCTGCAGTTGCGGTGAGGCCGAAATCTGTTGGACCATGCAACGTGAAGTCTAA--------------------------------------------------------------AC--TTT---ATA-------------------------------------------------TAAAATCA----GTCACATCATCACAAGCATAATTCAT------------------------------TAACAAAG--------GAAAAGGATAAAGAAAACATT----ATCAGT-TG--------------AACT---------------------TCACTCGAAACTCACTCGAAAATTGAAATTGGATTTTGGAAAATAAAAGAAAAAAGAGCAAAAAGAAAC-AAAATGGATCAACATAGCGCTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................AAC-AAAATGGATCAACATAGC.....2112.00200020
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCAAAAAGAAAC-AAAATGGAT..............2211.00101000
.........................................................................................................................................................................................................................................................................................................................ACT---------------------TCACTCGAAACTCACT.............................................................................1911.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................AAC-AAAATGGATCAACATAGCGCTG.2511.00100010
.......................GAAATCTGTTGGACCATGCAACGT...............................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....................................................................................................................................................................................................................................................................................................................................................................AATTGAAATTGGATTTTGGAAAATA................................................2511.00100010
...................................................................................................................................................................................................................................................................................................................................................................................TTTGGAAAATAAAAGAAAAAAGAGC..................................2511.00100010
.......................GAAATCTGTTGGACCATGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..........................................................................................................................................................................................................................................................................................ATT----ATCAGT-TG--------------AACT---------------------TCACTCGAAACT.................................................................................2711.00100010
..............................GTTGGACCATGCAACGTGAAGTCT........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....................................................................................................................................................................................................................................................................................................GT-TG--------------AACT---------------------TCACTCGAAACTCACT.............................................................................2411.00110000
..................................................................................................................................................................................................................................................................................................................................................................GAAAATTGAAATTGGATT..........................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAGCAAAAAGAAAC-A......................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................ATAAAAGAAAAAAGAGCAA................................1911.00100010
..................................................................................................................................A-------------------------------------------------TAAAATCA----GTCACATCATCACAAGCAT...........................................................................................................................................................................................................................2811.00100010
......................................................................................................................................................................................................................................................................................................................................................................ATTGAAATTGGATTTTGGA.....................................................1911.00100010
.......................................................................................................................................................................................................................................................................................................................................................................TTGAAATTGGATTTTGGAAA...................................................2011.00100010
.......CAGTTGCGGTGAGGCCGAAATCTGTTG............................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
........................................................................................................................................................................................................................................................................................ACATT----ATCAGT-TG--------------AACT---------------------TCACTCGAAAC..................................................................................2811.00100010
.........................................................................................................................................................................................................................................................................................CATT----ATCAGT-TG--------------AACT---------------------TCACT........................................................................................2111.00110000
.......................................................................................................................................................................................................................CAT------------------------------TAACAAAG--------GAAAAGGAT.............................................................................................................................................................2011.00100010
droVir3
TTGTCTGCAGTTGCGGCGAGGCCGAAATCTGTTGGACTATGCAGCGCGAGGTTTAGACAAAAGGATCAGAGACCAACTGACAGCCACAACTCAAATCCCAAATCCAAAGCCAACCAAATC-AGTTT--ATC-------------------------------------------------TTTGATCATCTCGTCATCTC----------------GTCACCATC-------AA-CAA------------------------------------C-AAGTTC-------AGTATAAATCACGATACCTTT----------------------GCCAAGCAG--TACATC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGACCAGCACAGTGCGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................AAAGGATCAGAGACCAACT................................................................................................................................................................................................................................................................................................................................................................1913.003000000011000000000000000000000001000000000000000000000000000000
TTGTCTGCAGTTGCGGCGAGGCCGAA....................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000003
........................AAATCTGTTGGACTATGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000001000000000000100000000000000000000000000000
.TGTCTGCAGTTGCGGCGAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2212.002001000000000000000000000000000001000000000000000000000000000000
.............................................................................................................CCAACCAAATC-AGTTT--ATC-------------------------------------------------TTTGATC...................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................................................................................................................................................................................................................................................TC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGACC.............2211.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AT--------------------CGG-----G-C-AAAATGGACCG............1811.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CTTT----------------------GCCAAGCAG--TACATC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGACCAGC..........4211.001000000000000000000000000000000000000000000000000000000000010000
..........................................................AAAAGGATCAGAGACCAACT................................................................................................................................................................................................................................................................................................................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
..........................ATCTGTTGGACTATGCAGCGCGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................G-C-AAAATGGACCAGCACAGTGCG..2311.001000000000000000010000000000000000000000000000000000000000000000
............GCGGCGAGGCCGAAATCTGTTG............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGACCAGC..........2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGACCAGCACAGTGC...1911.001000000000000010000000000000000000000000000000000000000000000000
................................TGGACTATGCAGCGCGAGGTTTAGACA...................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
......................CGAAATCTGTTGGACTATGC....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.....TGCAGTTGCGGCGAGGCCGAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000100000000000000000000000000000000000000
......................................................AGACAAAAGGATCAGAGACCA...................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................CAACCAAATC-AGTTT--ATC-------------------------------------------------TTT.......................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..................AGGCCGAAATCTGTTGGACTA.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................ATCTCGTCATCTC----------------GTCACCAT..............................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...................................................................AGAGACCAACTGACAGCC.........................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
..........................ATCTGTTGGACTATGCAGCGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................CAAATC-AGTTT--ATC-------------------------------------------------TTTGATCAT.................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
...............GCGAGGCCGAAATCTGTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000001000000000000000000000000000000000000000000000000000
........AGTTGCGGCGAGGCCGAAATCT................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AG--TACATC--------------------AT-CAT--------------------CGG-----G-C-AAA....................2111.001100000000000000000000000000000000000000000000000000000000000000
..................................................GTTTAGACAAAAGGATCAGA........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................AATCCAAAGCCAACCAAATC-AGTTT--ATC-------------------------------------------------..........................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAAGCAG--TACATC--------------------AT-CAT--------------------CGG-----G-.........................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................GACTATGCAGCGCGAGGTTTAGACAA..................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CAT--------------------CGG-----G-C-AAAATGGACCAGCACAGTGC...2811.001000000000000000000000000000000000000000000000000000000000010000
..............GGCGAGGCCGAAATCTGTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..................AGGCCGAAATCTGTTGGACTATGCAGCGCGAGGTT.........................................................................................................................................................................................................................................................................................................................................................................................3511.001000000000000000000000000000000000000000000000000000000000010000
..................................GACTATGCAGCGCGAGGTTTAGA.....................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AGCCAACCAAATC-AGTTT--ATC-------------------------------------------------TTTG......................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................AATCCCAAATCCAAAGCCAAC............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
................CGAGGCCGAAATCTGTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ACATC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGACCAGC..........2811.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................GG-----G-C-AAAATGGACCAGCACAGTGCGG.2611.001000000000000000000000000000000000001000000000000000000000000000
..............GGCGAGGCCGAAATCTGTTGGACTATG.....................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................CAAAAGGATCAGAGACCAACT................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
......................................................AGACAAAAGGATCAGAGACC....................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
....................................................TTAGACAAAAGGATCAGA........................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....CTGCAGTTGCGGCGAGGCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
...............GCGAGGCCGAAATCTGTTGGACTATGC....................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGACCAGCACAGTGC...2011.001000000000000001000000000000000000000000000000000000000000000000
.......................GAAATCTGTTGGACTATGCA...................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGACCAGCACAGTGCG..2111.001000000000000000000000000000000000010000000000000000000000000000
...........................................................AAAGGATCAGAGACCAACTGACAGCC.........................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
...................................................................AGAGACCAACTGACAGCCACAACTCAA................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCAG--TACATC--------------------AT-CAT--------------------CGG-----G-C-AAAATGGA...............2811.001000000000000000000000000000000000000000000000000000000000100000
.........................AATCTGTTGGACTATGCAGCGCGAG............................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TAGTTTGTAGCTGCGGCGAAGCGGAAATCTGTTGGACAATGCAGCGCGAGGTCTAA--------------------------------------------------------------CGAAGTT---GGAAAGTTTGATTCGAAGCACATTAAGA--------------------------AAAC--CTCAGTCAAAAT----------------------ACCGATCATCAATCAACCA--------------------------------------ATC-------ATCAAC-TC---------------------------------------------ATCTTT--------------------AT-CAA--------------------A----TCAAGA-AATATGGATCAGCATAGCGCAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................GAAGCGGAAATCTGTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.........GCTGCGGCGAAGCGGAAATCTGTTG............................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
................................................................................................................................................................................................GTCAAAAT----------------------ACCGATCATCAAT...................................................................................................................................................................................................2111.001100000
.......................................................................................................................GAAGTT---GGAAAGTTTGATTCG...............................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................AT----------------------ACCGATCATCAATCAAC...............................................................................................................................................................................................1911.001100000
........AGCTGCGGCGAAGCGGAAATCTGTTG............................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
................................................................................................................................................AGCACATTAAGA--------------------------AAAC--CTCAGTC...........................................................................................................................................................................................................................................2311.001000010
......................................ATGCAGCGCGAGGTCTAA--------------------------------------------------------------CGAAGTT---..............................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................ATTAAGA--------------------------AAAC--CTCAGTCAAAAT----------------------ACC.............................................................................................................................................................................................................2611.001100000
...............................................................................................................................................................................................................................................CA--------------------------------------ATC-------ATCAAC-TC---------------------------------------------ATCTTT--------------------AT-C.........................................................2211.001100000
....................GCGGAAATCTGTTGGACAATGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................AATCTGTTGGACAATGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........CTGCGGCGAAGCGGAAATCTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.................GAAGCGGAAATCTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................GAAGTT---GGAAAGTTTGATTC................................................................................................................................................................................................................................................................................................2011.001100000
...................AGCGGAAATCTGTTGGACAATGC....................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGATCAGCATAGCGCA..2011.001000001
.........................................................................................................................................................................................................................................................................................C-------ATCAAC-TC---------------------------------------------ATCTTT--------------------AT-CAA--------------------A----TC............................2311.001100000
..............GGCGAAGCGGAAATCTGTTGGACAATG.....................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
..................................................................................................................................AAAGTTTGATTCGAAGCACA........................................................................................................................................................................................................................................................................................2011.001000001
droGri2
TTGTCTGCAGTTGCGGCGAGGCCGAAATCTGTTGGACTATGCAACGTGAGGTTTAA--------------------------------------------------------------AA-AAA---------------------------AAAAAAAAACTAAGAAAAAAAACTCATC-TTCGATCA--TCATCATCTC----------------------AACAAACATTTGCTGAGTATACT------------------------------------T-------ATCATC-AGA-----------CGAACAAAATAAA---ACTAAAAAAAAAAACT-AAATAA--------------------AT-AAA--------------------ATA-----ACA-AAAATGGATCAGCATAGTCCCGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGATCAGCATAGTCC...2011.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGATCAGCATAGTCCC..2111.00110
dp5
TCATCTGCAGTTGCGGTGAGGCCGAGATCTGCTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TC--ATT---GCG-------------------------------------------------C-AAATCACCCCAAT---TC----------------GTCATCATCCGCCATCATTCA------------AGCAAAT------C-ATATAAGCAAG-GAACTT-------GACATC-GAT--------------A---------TTG------AACAAACTCCCAAAAGG--------------------AT-T-----------------------AG-----GCA-AAAATGGATCAGCACAGTGCGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................GCCGAGATCTGCTGGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
...............................CTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2112.0020100001000
.......CAGTTGCGGTGAGGCCGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
...................................................................................................................................................................................................................................................................................................CATC-GAT--------------A---------TTG------AACAAACTCCCAA.....................................................................................2411.0010100000000
................TGAGGCCGAGATCTGCTGGACCC.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000010
................................................................................................................................................................................................................................................................................AAG-GAACTT-------GACATC-GAT--------------A---------TTG------AAC...............................................................................................2511.0010000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCAGCACAGTGCGGA1911.0010100000000
.................................................................................................................................................................................................................................................................................................GACATC-GAT--------------A---------TTG------AACAAACTCCCAA.....................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................AT------C-ATATAAGCAAG-GAACTT-------GACATC-......................................................................................................................................2611.0010010000000
...................GGCCGAGATCTGCTGGACCAT......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................AAG-GAACTT-------GACATC-GAT--------------A---------TTG------AACA..............................................................................................2611.0010100000000
....CTGCAGTTGCGGTGAGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................T-----------------------AG-----GCA-AAAATGGATCAGCACAGTGCGGA2911.0010010000000
...................................................................................................................................................................................................................................................................................................CATC-GAT--------------A---------TTG------AACAAACTCC........................................................................................2111.0010100000000
.....................................CATGCAACGTGAGGTCTAA--------------------------------------------------------------TC--....................................................................................................................................................................................................................................................................................................................2111.0010000001000
............................CTGCTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
......................................................................................................................................................................................................................................TCATTCA------------AGCAAAT------C-ATATAAGCAAG-GA........................................................................................................................................................2811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................AAACTCCCAAAAGG--------------------AT-T-----------------------AG-----GCA-AAAATG.................2811.0010100000000
...................................................................................................................................................................................................................................................................................................CATC-GAT--------------A---------TTG------AACAAACTCCC.......................................................................................2211.0010100000000
...........TGCGGTGAGGCCGAGATCTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........AGTTGCGGTGAGGCCGAGATCTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
................................................................................................................................GCG-------------------------------------------------C-AAATCACCCCAAT---TC----------------GTC...................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................CATCATCCGCCATCATTCA------------A....................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................C-ATATAAGCAAG-GAACTT-------G............................................................................................................................................1911.0010000100000
...................................................................................................................................................................................................................................................................................................CATC-GAT--------------A---------TTG------AACAAACTCCCAAAAG..................................................................................2711.0010000100000
......GCAGTTGCGGTGAGGCCGAGATC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................CATGCAACGTGAGGTCTAA--------------------------------------------------------------TC--ATT---GCG-------------------------------------------------C-........................................................................................................................................................................................................................................................2811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-AAAATGGATCAGCACAGTGC...2111.0010010000000
droPer2
TCATCTGCAGTTGCGGTGAGGCCGAGATCTGCTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TC-ATTT---CGC---------------------------------------------------ATATCACCCCAAT---TC----------------GTCATCATCCGCCATCATTCA------------AGCAAAT------C-ATATAAGCAAG-GAACTT-------GACATC-GAT--------------A---------CTG------AACAAACTCCCAAAAGG--------------------AT-T-----------------------AG-----GCA-AAAATGGATCAGCACAGTGCGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................GAGGCCGAGATCTGCTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1918.008800000
.................GAGGCCGAGATCTGCTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2018.008800000
..................AGGCCGAGATCTGCTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2014.004400000
.........................................................................................................................................................................................................................................................................................................AT--------------A---------CTG------AACAAACTCCCAAAAGG--------------------AT-T-----------------------..................................2614.004400000
...................GGCCGAGATCTGCTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
..............GGTGAGGCCGAGATCTGCTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2813.003300000
....................................................................................................................................................................................................................................................................................................ATC-GAT--------------A---------CTG------AACAAACTCCCAAAAGG--------------------.............................................................2713.003300000
.................GAGGCCGAGATCTGCTGGACCATG.....................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
......................CGAGATCTGCTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...................................................................................................................................................................................................................................................................................................CATC-GAT--------------A---------CTG------AACAAACT..........................................................................................1912.002200000
.........................GATCTGCTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2712.002010001
......................................................................................................................................................................................ATATCACCCCAAT---TC----------------GTCAT.................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................G-----GCA-AAAATGGATCAGCACAGT.....2211.001001000
...............GTGAGGCCGAGATCTGCTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................................................................................................................................GACATC-GAT--------------A---------CTG------AACAAACTCCCAAA....................................................................................2711.001010000
.........GTTGCGGTGAGGCCGAGATCTG...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGATCAGCACAGTGC...2011.001010000
.................GAGGCCGAGATCTGCTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCAGCACAGTGCGGA2011.001010000
........................................................................................................................................................................................................................................................................ATATAAGCAAG-GAACTT-------GACATC-GAT--------------A---------CT.........................................................................................................2911.001100000
....................................................CTAA--------------------------------------------------------------TC-ATTT---CGC---------------------------------------------------ATATCACCCC..............................................................................................................................................................................................................................................2311.001001000
........AGTTGCGGTGAGGCCGAGATCTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................................................................................................................CGC---------------------------------------------------ATATCACCCCAAT---TC----------------GT....................................................................................................................................................................................................................2011.001010000
.................................GGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...............GTGAGGCCGAGATCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
droAna3
TCACCTGCAGTTGCGGCGAAGCTGAAATCTGTTGGACCATGCAGCGTGAGGTCTAGGC------------------------------------------------------------TT-CATT---GAC-----------------------------------------------AGAGAGA--------TCACATC----------------------GTCAAGCGTCAGATAACTAAATTCGAAAGCACCA--------GG-----CAAG-GAATTC-------CACAAC-GAA---------------------------------AT-ACTAACTCGAAATT--------------------AT-AAG-------------------GCAG--TCAAAA-AATATGGATCAACACAGCGCGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................ATGCAGCGTGAGGTCTAGGC------------------------------------------------------------TT-C....................................................................................................................................................................................................................................................................................................................2312.002000002
..................AAGCTGAAATCTGTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........AGTTGCGGCGAAGCTGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.....................................CATGCAGCGTGAGGTCTAGGC------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................GATAACTAAATTCGAAAGCACC...............................................................................................................................................................................2211.001010000
......................................................................................................................................................................................................................................................................................................................................................CGAAATT--------------------AT-AAG-------------------GCAG--TCAAAA-.......................2211.001000010
........................................................................................................................................................................................................................................................................................................GAA---------------------------------AT-ACTAACTCGAAATT--------------------AT-AAG-------------------GCA.................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................AACTCGAAATT--------------------AT-AAG-------------------GCA.................................1911.001010000
.......................................................................................................................................................................................GA--------TCACATC----------------------GTCAAGCGTCAGAT..................................................................................................................................................................................................2311.001000010
...................AGCTGAAATCTGTTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................TCGAAAGCACCA--------GG-----CAAG-GAATTC-------CACA.........................................................................................................................................2811.001010000
..............GGCGAAGCTGAAATCTGTTG............................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...................................................................................................................................................................................................................................................TTCGAAAGCACCA--------GG-----CAAG-..........................................................................................................................................................1911.001100000
.....................................................................................................................................................................................GAGA--------TCACATC----------------------GTCAAGCGTCA.....................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................CAAAA-AATATGGATCAACACAGCGC...2511.001010000
.............................................................................................................................................................................................................................................ACTAAATTCGAAAGCACCA--------GG-----CAAG-GA........................................................................................................................................................2711.001010000
..............................................................................................................................................................................................................................GTCAAGCGTCAGATAACTAAATTCGA......................................................................................................................................................................................2611.001000010
.....................................................................................................................................................................................................ATC----------------------GTCAAGCGTCAGATAACTA.............................................................................................................................................................................................2211.001100000
....................................................CTAGGC------------------------------------------------------------TT-CATT---GAC-----------------------------------------------AGAGAGA--------TCAC.........................................................................................................................................................................................................................................2611.001000001
.........GTTGCGGCGAAGCTGAAATCT................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................AGAGA--------TCACATC----------------------GTCAAGCGTC......................................................................................................................................................................................................2211.001010000
.......................GAAATCTGTTGGACCATGCAG..................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
................................................................................................................................GAC-----------------------------------------------AGAGAGA--------TCACATC----------------------GT..............................................................................................................................................................................................................1911.001000010
..........................................................................................................................................................................................................................................................................................................A---------------------------------AT-ACTAACTCGAAATT--------------------AT-AAG-------------------GC..................................2411.001010000
....................................................................................................................................................................................................................................................................................GAATTC-------CACAAC-GAA---------------------------------AT-ACT............................................................................................2011.001010000
..................................................................................................................................C-----------------------------------------------AGAGAGA--------TCACATC----------------------GTCAAGC.........................................................................................................................................................................................................2211.001000100
.....................................CATGCAGCGTGAGGTCTAGGC------------------------------------------------------------TT-.....................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................CGAAAGCACCA--------GG-----CAAG-GAAT......................................................................................................................................................2111.001100000
.................................................GGTCTAGGC------------------------------------------------------------TT-CATT---GAC-----------------------------------------------AGAGA.......................................................................................................................................................................................................................................................2311.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................AG--TCAAAA-AATATGGATCAACACAGCGC...2811.001000010
droBip1
TCACTTGCAGTTGCGGCGAAGCTGAAATCTGTTGGACCATGCAGCGTGAGGTCTAGAC------------------------------------------------------------TT-CATT---G-------------------------------------------------------A--------TCACATT----------------------GTCAAGCGTCAGATAACTAGAATCGAAAGCACCA--------GGA-----AAG-GAATTC-------GACAAC-GCA---------------------------------AT-ACTAACTCGAAATT--------------------AT-AAG--------------------CAG-----GCA-AATATGGATCAACACAGCGCAGASizeHit CountTotal NormTotal
No Reads
droKik1
TTGTCTGCAGTTGTGGCGAGGCCGAGATCTGTTGGACTATGCAGCGTGAGGTGTAA--------------------------------------------------------------AT-CGTAT-ATGT-------------------------------------------------TGCGATCACACTGTCACT----------------------------------TGAAAACTTGAAACGAAAGAACAACAAGGCTAGGCGAGGCAAG-GAATTC-------GGCAA----A---------------------------ACCCAACAAACAAACTCGAAATT--------------------AT-CAG--------------------CAG-----GCG-AAAATGGATCAGCACAGCGCGGASizeHit CountTotal NormTotal
No Reads
droFic1
TTGTCTGCAGTTGCGGCGAAGCTGAAATTTGTTGGACTATGCAGCGTGAGGTGTAA--------------------------------------------------------------TT-CGCTAATTGC-------------------------------------------------GGGGATCACACTGTCACATC----------------------GTCAAGCATCAGGCAACTGGAAACGAAAGCACAA--------GGAAAGGCAAG-GAACTC-------GGCATC-GTA---------------------------------A-----CTCTCGAAATT----AGG-------AA----AT-CAG--------------------CAG-----GCTCAAAATGGATCTCCATAGCGCGGASizeHit CountTotal NormTotal
No Reads
droEle1
TTGTCTGCAGTTGCGGAGAGGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-AGTT---GGC-------------------------------------------------CGGAATCACACTGTCACACC----------------------GTCA-------AGCAACTGGAAACGAAAGCACAA--------GGAAAGGCAAG-GAATTC-------GATATT-GTA---------------------------------ACGAAGCACTCGAAATA--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCACCACAACGCGGASizeHit CountTotal NormTotal
No Reads
droRho1
TTGTCTGCAGTTGCGGCGAGGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GAA-------------------------------------------------AGGGATCACACTGTCACACT----------------------GTCAAGCATCAGGCAACTGGAAACGAAAGCACAA--------GGAAAGTCAAG-GAATTC-------GGCATT-GTA---------------------------------ACGAAACTCTCGAAATT--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCACCATAACGCCGASizeHit CountTotal NormTotal
No Reads
droBia1
TTGTCTGCAGTTGCGGCGAGGCCGAGATCTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-TAGTC--GAC-------------------------------------------------CGGAATCACACTGTCACATC----------------------GTCAAGCGTCAGACAACTGGAAACGA-AGCACAA--------GGAAAGGCAAG-GAATTC-------GGAATT-GTA---------------------------------ACGAAACTCTCGAAATT--------------------AT-CAG--------------------AAG-----GCT-AAGATGGATCCCCACAGCGCGGASizeHit CountTotal NormTotal
No Reads
droTak1
TTGTCTGCAGTTGCGGCGAGGCCGAGATTTGCTGGACCATGCAGCGTGAGGTTTAA--------------------------------------------------------------TT-GGCT---AGC-------------------------------------------------CGGGATCACACTGTCAAA--------AATAAGCTTCAT-------AAGCATCAGACAACTGGA-----AAGCACAA--------GGAAAGTCAAG-GAAACC-------C------------------------------------------------AACTCGAAATTAACTAGA-----------------AA--------------------AAG-----GCT-AAAATGGATCCACATAGCGCGGASizeHit CountTotal NormTotal
No Reads
droEug1
TTGTCTGCAGTTGCGGTGAGGCCGAAATTTGTTGGACTATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-TGTG---AAC-------------------------------------------------CAAGTTCAAACTGTCA--TC----------------------GTCAAACGTCAGGCAACTGGAAACTAAGGCACAA--------GGAAAGACAAG-GAAGTC-------AATATT-GTA---------------------------------ACGAAACTCTCGAAATT--------------------AT-CAG--------------------CAA-----GCC-AAAATGGATCCCCACAGTGCTGASizeHit CountTotal NormTotal
No Reads
dm3
TTGTCTGCAGTTGCGGCGAAGCCGAAATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---TGA-------------------------------------------------TGAGATCACACTGTTATAGC----------------------GTCAAAGATCAGGCAACTGGCAGCGAAAGCAAAA--------GAAGCGGAAAAGGAATTCGGAATTCGGAATT-GTA---------------------------------GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAA-----GCT-AAGATGGATCCACATAGTGCGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.................GAAGCCGAAATTTGTTGGACT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GTCAAAGATCAGGCAACTGGC...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................CACACTGTTATAGC----------------------GTCAAAGATC......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTGGACCATGCAGCGTGAGG...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CATGCAGCGTGAGGTCTA.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GTCAAAGATCAGGCAACT..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGATCCACATAGTGCGG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................ATTCGGAATT-GTA---------------------------------GAGAATATCTCGA.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................C----------------------GTCAAAGATCAGGCAACTGGCAGCGAAA....................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AT-CGG--------------------CAA-----GCT-AAGATGGAT..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CGG--------------------CAA-----GCT-AAGATGGATCCACAT........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AACTGGCAGCGAAAGCAAAA--------G.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACTGGCAGCGAAAGCAAAA--------GA....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAATTCGGAATTCGGAATT-GTA---------------------------------G.................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTTGGACCATGCAGCGTGAG............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................AATA--------------------AT-CGG--------------------CAA-----GCT-AAGATGGATCCA...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GAAAGCAAAA--------GAAGCGGAAAAGGAATTCG...................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGACCATGCAGCGTGAGGTCT........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................AGATCACACTGTTATAGC----------------------GTCAA...........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCGGAATT-GTA---------------------------------GAGAATATCTATC.....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CTAA--------------------------------------------------------------TT-CGTT---TGA-------------------------------------------------TGAGATC...................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCCGAAATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAATTCGGAATTCGGAATT-GTA---------------------------------GA................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAAAGGAATTCGGAATTCGGAATT-......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GAATT-GTA---------------------------------GAGAATATCTCG......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................TGAGATCACACTGTTATAGC----------------------................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTGTTGGACCATGCAGCGTGAG............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAATTCGGAATTCGGAATT-GTA---------------------------------GAG...............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGTCTAA--------------------------------------------------------------TT-CGTT---TGA-------------------------------------------------TGAGA.....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................AGATCACACTGTTATAGC----------------------GTCAC...........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................GAAAAGGAATTCGGAATTC.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................A-------------------------------------------------TGAGATCACACTGTTATAGC----------------------GT..............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............GGCGAAGCCGAAATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TATCTCGAAATA--------------------AT-CGG--------------------CAA-----GCT-AAG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATA--------------------AT-CGG--------------------CAA-----GCT-AAGATGGAT..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................GATCACACTGTTATAGC----------------------GTCAAAGAT.......................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAAGCAAAA--------GAAGCGGAAAAGG.........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................GAAGCGGAAAAGGAATTCGGAATC..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAA-----GCA-TC.....................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTCTAA--------------------------------------------------------------TT-CGTT---TGA-------------------------------------------------TGAGATC...................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAAATTTGTTGGACCATGCAGCGT...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATTCGGAATT-GTA---------------------------------GAGAATATCTC.......................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGACCATGCAGCGTGAGG...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GCGGAAAAGGAATTCGGAATTCGGAATT-G.....................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CTGTTATAGC----------------------GTCAAAGA........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................TGA-------------------------------------------------TGAGATCACACTGTTAT.........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GAAGCGGAAAAGGAATTCGGA.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................AAGCCGAAATTTGTTGGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TATAGC----------------------GTCAAAGATCAGGCAACTGGC...........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..............................................................................................................................................................................................................................................................................GAAAAGGAATTCGGAATTCGGAATT-......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AAGGAATTCGGAATTCGGAATT-GTA---------------------------------TC................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAAATTTGTTGGACCATGCAG..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GAAGCGGAAAAGGAATTCGGAATTCGGAA.........................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TCAAAGATCAGGCAACTGGCAGCGAAAGC..................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GAAGCGGAAAAGGAATTCGGAATTCGG...........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AATTCGGAATTCGGAATT-GTA---------------------------------GAG...............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TAA--------------------------------------------------------------TT-CGTT---TGA-------------------------------------------------TGAGATC...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACGGTTATAGC----------------------GTCAAGGATCAGGCAACTGGAAGCGAAAGCAAAA--------GAAGAGGAAAAGGAATTCGGAACTCGGAATT-GTA---------------------------------GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGGATCCACATAGTGCGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................CGGAACTCGGAATT-GTA---------------------------------GA................................................................................................19110.001004500000000100000
......................................................................................................................................................................................................................................................................................ATTCGGAACTCGGAATT-GTA---------------------------------GA................................................................................................2218.00802600000000000000
......................................................AA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACG..............................................................................................................................................................................................................................................2312.00202000000000000000
..............................................................................................................................................................................................................................GTCAAGGATCAGGCAACTGGA...........................................................................................................................................................................................2112.00201000000000100000
...................................................................................................................................................................................................ATAGC----------------------GTCAAGGATCAGGC..................................................................................................................................................................................................1912.00201000010000000000
...............GCGAAGCCGAGATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
.............................TGTTGGACCATGCAACGTGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................2412.00200000011000000000
..............GGCGAAGCCGAGATTTGTTGG...........................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
....................GCCGAGATTTGTTGGACCATGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
......................................................AA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACGGTT...........................................................................................................................................................................................................................................2612.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................GAATATCTCGAAATA--------------------AT-CGG--------------------C..................................2112.00201100000000000000
...........................TTTGTTGGACCATGCAACGTGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................2612.00200000011000000000
..........................................................................................................................................................................................................................................................................................GGAACTCGGAATT-GTA---------------------------------GA................................................................................................1812.00201100000000000000
.................GAAGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
......................CGAGATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................1512.00200000002000000000
.............................TGTTGGACCATGCAACGTGAGGTCTA.......................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..........................................................................................................................................................................................CACACGGTTATAGC----------------------GTCAAGGATCAGGC..................................................................................................................................................................................................2811.00101000000000000000
.........................................................................................................................................................................................................................................................................................CGGAACTCGGAATT-GTA---------------------------------GAGA..............................................................................................2111.00100100000000000000
.........................................................................................................................................................................................................................................................................................CGGAACTCGGAATT-GTA---------------------------------GG................................................................................................1911.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................ATATCTCGAAATA--------------------AT-CGG--------------------C..................................1911.00100000000000100000
.........................................................................................................................................................................................................................................................................................CGGAACTCGGAATT-GTA---------------------------------GATT..............................................................................................2111.00100100000000000000
...................AGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
..............GGCGAAGCCGAGATTTGTTGGACCATGCA...................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
............................................................................................................................................................................................................................................................AAAA--------GAAGAGGAAAAGGA........................................................................................................................................................1811.00100010000000000000
...................AGCCGAGATTTGTTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
................................................................................................................................................................................................................................................GGAAGCGAAAGCAAAA--------GAAGAGGAAAAG..........................................................................................................................................................2811.00100010000000000000
............GCGGCGAAGCCGAGATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.................GAAGCCGAGATTTGTTGGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...................AGCCGAGATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..............................................................................................................................................................................................................................GTCAAGGATCAGGCAACTGGAA..........................................................................................................................................................................................2211.00101000000000000000
..............GGCGAAGCCGAGATTTGTTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................................................................................AGAGGAAAAGGAATTCGGAACT..............................................................................................................................................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................CTCGGAATT-GTA---------------------------------GAGAATATCTCG......................................................................................2411.00100100000000000000
...........................................................................................................................................................................................ACACGGTTATAGC----------------------GTCAAGG.........................................................................................................................................................................................................2011.00100000000000100000
......................CGAGATTTGTTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGGATC.............2411.00100010000000000000
....................................................................................................................................................................................................TAGC----------------------GTCAAGGATCAGGC..................................................................................................................................................................................................1811.00100100000000000000
.........................GATTTGTTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................ATATCTCGAAATA--------------------AT-CGG--------------------CAG-----GC.........................2311.00100100000000000000
.................................................................................................................................................................................................TTATAGC----------------------GTCAAGGATCAGGCAACTGGA...........................................................................................................................................................................................2811.00100000010000000000
..............GGCGAAGCCGAGATTTGTTGGACCATGCG...................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
....................................................CTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGAT....................................................................................................................................................................................................................................................1911.00101000000000000000
....................GCCGAGATTTGTTGGACCATG.....................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
................................................................................................................................................................................................................................................................................................CGGAATT-GTA---------------------------------GAGAATATCTCGAAAT..................................................................................2611.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAATATCTCGAAATA--------------------AT-CGG--------------------CA.................................2211.00100100000000000000
...........TGCGGCGAAGCCGAGATTTGTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..........................................................................................................................................................................................................................................................................................GGAACTCGGAATT-GTA---------------------------------GAGAAT............................................................................................2211.00100100000000000000
.....................CCGAGATTTGTTGGACCATGC....................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
................CGAAGCCGAGATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.................................................................................................................................................................................................................................................................................AAGGAATTCGGAACTCGGAATT-......................................................................................................................................2211.00100010000000000000
..............GGCGAAGCCGAGATTTGTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.............................................................................................................................................................................................................................................................................GGAAAAGGAATTCGGAACTCGGAATT-GT....................................................................................................................................2811.00100010000000000000
........................................................................................................................................................................................................................................................AAGCAAAA--------GAAGAGGAAAAGGAATTC....................................................................................................................................................2611.00100100000000000000
......................................................AA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATC...................................................................................................................................................................................................................................................1811.00100000010000000000
.............................................GTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GG............................................................................................................................................................................................................................................................................................................1911.00100000000000100000
....................................................................................................................................................................................................................................................................................GAATTCGGAACTCGGAATT-GTA---------------------------------GA................................................................................................2411.00101000000000000000
............................................CGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGA.....................................................................................................................................................................................................................................................2611.00100000001000000000
................................................................................................................................................................................................................................................................................................CGGAATT-GTA---------------------------------GAGAATATCTCGAA....................................................................................2411.00100100000000000000
..............................................................................................................................................................................................................................................CTGGAAGCGAAAGCAAAA--------GAAGAGGAAA............................................................................................................................................................2811.00100010000000000000
........................................................................................................................................................................................................................................................................................TCGGAACTCGGAATT-GTA---------------------------------GAGAATATCT........................................................................................2811.00101000000000000000
...........TGCGGCGAAGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................................................................................AACTCGGAATT-GTA---------------------------------GAGA..............................................................................................1811.00110000000000000000
...........................TTTGTTGGACCATGCAACGTGAGG...........................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
........................................................................................................................................................................................................................................................................................TCGGAACTCGGAATT-GTA---------------------------------GA................................................................................................2011.00100000001000000000
......................CGAGATTTGTTGGACCATGCAACGTGA.............................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................................................CTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGA.....................................................................................................................................................................................................................................................1811.00100000001000000000
...............................................................................................................................................................................................................................................................................AAAAGGAATTCGGAACTC.............................................................................................................................................1811.00101000000000000000
.......................GAGATTTGTTGGACCATGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.............................................................................................................................................................................................................................................................................................ACTCGGAATT-GTA---------------------------------GA................................................................................................1511.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................AAATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGGATCCAC..........2911.00100000001000000000
...........TGCGGCGAAGCCGAGATTTGTTGGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
..................................................................................................................................A-------------------------------------------------TGAGATCACACGGTTATAGC----------------------................................................................................................................................................................................................................2111.00101000000000000000
droSec2
TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAACGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------AGAGTTATAGCTGTTATAGC----------------------GTCAAAGATCAGGCAACTGGAAGCGAAAGCAAAA--------GAAGAGGAAAAGGAATTCGGAACTCGGAATT-TTA---------------------------------GAGAATATCTCGAAATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGGATCCACATAGTGCGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................TTTGTTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2512.0020110
................................................................................................................................................................................................................................................................................AAAGGAATTCGGAACTCGGAAT........................................................................................................................................2212.0020110
..........................ATTTGTTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2612.0020020
.......................................................................................................................................................................................................................................CAGGCAACTGGAAGCGAAAGCA.................................................................................................................................................................................2211.0011000
.............................................................................................................................................................................................................................................ACTGGAAGCGAAAGCAAAA--------......................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................GCAAAA--------GAAGAGGAAAAGGA........................................................................................................................................................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGGATCCACATAGTGCGGA2311.0010100
..................................................................................................................................................................................................TATAGC----------------------GTCAAAGATCAGGCA.................................................................................................................................................................................................2111.0010100
.........................................................................................................................................................................................................................................................................................CGGAACTCGGAATT-TTA---------------------------------GAGA..............................................................................................2111.0010010
............................................CGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------AGAG......................................................................................................................................................................................................................................................2511.0010100
......................................................................................................................................................................................................................................................................................ATTCGGAACTCGGAATT-TTA---------------------------------GA................................................................................................2211.0010010
.........................................................................................................................................................................................................................................................................................CGGAACTCGGAATT-TTA---------------------------------GA................................................................................................1911.0010010
.........................GATTTGTTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
..........................................................................................................................................................................................ATAGCTGTTATAGC----------------------GTCAAAGATCAGGC..................................................................................................................................................................................................2811.0010100
............................................................................................................................................................................................................................................................................AGGAAAAGGAATTCGGAACTCGGAAT........................................................................................................................................2611.0010100
................................................................................................................................................................................................GTTATAGC----------------------GTCAAAGATCAGGCA.................................................................................................................................................................................................2311.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCCACATAGTGCGGA2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................GAAATA--------------------AT-CGG--------------------CAG-----GCT-AAGATGG................2411.0010100
............................................................................................................................................................................................AGCTGTTATAGC----------------------GTCAAAGATCAGGC..................................................................................................................................................................................................2611.0010100
.............................................................................................................................................................................................................................................................................GGAAAAGGAATTCGGAACTCGGAATT-......................................................................................................................................2611.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCT-AAGATGGATCCACATA.......1911.0011000
.......................................................................................................................................................................................................................................................AAAGCAAAA--------GAAGAGGAAAAGGA........................................................................................................................................................2311.0010010
..........................................................................................................................................................................................................................................................................AGAGGAAAAGGAATTCGGAACTCGGAA.........................................................................................................................................2711.0011000
..............................GTTGGACCATGCAACGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
droYak3
TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GAA-------------------------------------------------TGAGATCACACTGTCACATC----------------------GTCAAACATCAGGCAACTGGAAACGAAAGCAAAC--------GGAAAGGAAAG-GAACTC-------GGCATT-GTA---------------------------------GAGAAAATCTCGAAATA--------------------AT-CAG--------------------CAG-----GCT-AAGATGGATCCACATAGTGCGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........TGCGGCGAAGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................27125.0025010000000024
.........................GATTTGTTGGACCATGCAGCGTGA.............................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
......................................ATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-.....................................................................................................................................................................................................................................................................................................................2012.00202000000000
.....................................................................................................................................................................................GAGATCACACTGTCACATC----------------------GT..............................................................................................................................................................................................................2112.00210000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCCACATAGTGCGGA2011.00100000010000
......GCAGTTGCGGCGAAGCCGAGATTTG...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................CGAGATTTGTTGGACCATGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................CGAGATTTGTTGGACCATGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................TCGAAATA--------------------AT-CAG--------------------CAG-----GCT-AAGATGGA...............2711.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AG-----GCT-AAGATGGATCCACATA.......2111.00100100000000
......................CGAGATTTGTTGGACCATGCAGCGT...............................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........................................................................................................................................................................................TCACACTGTCACATC----------------------GTCAA...........................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................GGAAAGGAAAG-GAACTC-------GGC..........................................................................................................................................2011.00100000010000
..........................ATTTGTTGGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................................................A-------------------------------------------------TGAGATCACACTGTCACATC----------------------GTCA............................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................CTC-------GGCATT-GTA---------------------------------GAGAAAATCTCGA.....................................................................................2511.00100000010000
...........................................................................................................................................................................................................................................................................AAGGAAAG-GAACTC-------GGCATT-GTA---------------------------------GA................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................CTC-------GGCATT-GTA---------------------------------GAGAAAATCTCGAA....................................................................................2611.00101000000000
.......................................................................................................................T-CGTT---GAA-------------------------------------------------TGAGATCACACTGTC...........................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................................................................................................................ACTGGAAACGAAAGCAAAC--------GGAAAGGA..............................................................................................................................................................2711.00100100000000
.........................GATTTGTTGGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
.......................................................................................................................T-CGTT---GAA-------------------------------------------------TGAGATCACACT..............................................................................................................................................................................................................................................2011.00100100000000
..........................................................................................................................................................................................................................................................GCAAAC--------GGAAAGGAAAG-GAA.......................................................................................................................................................2011.00100000010000
......................................................................................................................TT-CGTT---GAA-------------------------------------------------TGAGATCACACC..............................................................................................................................................................................................................................................2111.00100100000000
.............................................................................................................................................................................................................................................................AAC--------GGAAAGGAAAG-GAACTC-------GGC..........................................................................................................................................2311.00100100000000
..............................................................................................................................................................................................................................................................................................................................................GAAAATCTCGAAATA--------------------AT-CAG--------------------CAG-----G..........................2411.00100000010000
..............................GTTGGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............................TTGTTGGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................................................GAAAATCTCGAAATA--------------------AT-C.........................................................1811.00100100000000
................................TGGACCATGCAGCGTGAGGTCT........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................AA--------------------------------------------------------------TT-CGTT---GAA-------------------------------------------------TGAGATCACACT..............................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................ACTGGAAACGAAAGCAAAC--------GG....................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................AAGCAAAC--------GGAAAGGAAAG-GAACTC-------GGC..........................................................................................................................................2811.00100000010000
...............GCGAAGCCGAGATTTGTTGGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.................GAAGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................GAGATCACACTGTCACATC----------------------GTCAAAC.........................................................................................................................................................................................................2611.00101000000000
..............GGCGAAGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
............................................................................................................................................................................................................................................................................AGGAAAG-GAACTC-------GGCATT-GTA---------------------------------GAGA..............................................................................................2611.00101000000000
.........................GATTTGTTGGACCATGCAGCGT...............................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................TT-CGTT---GAA-------------------------------------------------TGAGATCACACT..............................................................................................................................................................................................................................................2111.00100000010000
.........................GATTTGTTGGACCATGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
................................................................................................................................................................................................................................................................................AAG-GAACTC-------GGCATT-GTA---------------------------------GA................................................................................................2011.00110000000000
................................................................................................................................................................................................................................CAAACATCAGGCAACTGGA...........................................................................................................................................................................................1911.00100100000000
.......................................................................................................................T-CGTT---GAA-------------------------------------------------TGAGATCACACTGTCAC.........................................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................GCAAAC--------GGAAAGGAAAG-GAACTC-------GGC..........................................................................................................................................2611.00100000010000
.................................................................................................................................................................................................................................................................................AG-GAACTC-------GGCATT-GTA---------------------------------G.................................................................................................1811.00100000010000
..........................................................................................................................................................................................................................................................................AAAGGAAAG-GAACTC-------GGCATT-GTA---------------------------------GA................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................ACGAAAGCAAAC--------GGAAAGGAAAG-..........................................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................AACATCAGGCAACTGGAAACGAAAG...................................................................................................................................................................................2511.00101000000000
..................................................................................................................................A-------------------------------------------------TGAGATCACACTGTCACATC----------------------GTCAAAC.........................................................................................................................................................................................................2811.00100000010000
...............GCGAAGCCGAGATTTGTTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................................................................................................................................................................................................................................................GAAAGCAAAC--------GGAAAGGAAAG-GAA.......................................................................................................................................................2411.00100000010000
......GCAGTTGCGGCGAAGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................AATCTCGAAATA--------------------AT-CAG--------------------CAG-----GCT-AA.....................2511.00101000000000
.................................GGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................TTGTTGGACCATGCAGCGTGAGGTCTA.......................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
droEre2
TTGTCTGCAGTTGCGGCGAAGCCGAGATTTGTTGGACCATGCAGCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACTGTCATATC----------------------GTCAAACATCAGGCACCTGGAAACGAAAGCAAAA--------GGAAAGGAAAG-GAATTC-------GTCATT-GTA---------------------------------GAGAAAATCTCAAACTA--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCCACATAGTGCGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................A--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACTGTCAT.........................................................................................................................................................................................................................................2712.0020000200
..........................ATTTGTTGGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2612.0020100100
..............................................................................................................................................................................................................................................CTGGAAACGAAAGCAAAA--------G.....................................................................................................................................................................1911.0010000100
........................................................................................................................................................................................................................................................................................................................................................AACTA--------------------AT-CAG--------------------CAG-----GCT-AAAATGGATCCAC..........2911.0010000100
...............................................GAGGTCTAA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATC...................................................................................................................................................................................................................................................2511.0010000100
............................................................................................................................................................................................................................................................AAAA--------GGAAAGGAAAG-GAATT.....................................................................................................................................................2011.0011000000
..........................................................................................................................................................................................................................................................................................................A---------------------------------GAGAAAATCTCAAACTA--------------------AT-CAG--------------------CA.................................2511.0010001000
.........................................................................................................................................................................................................................................................................................C-------GTCATT-GTA---------------------------------GAGAAAATCC........................................................................................2011.0010100000
.............................................GTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GG............................................................................................................................................................................................................................................................................................................1911.0010000100
........................................................................................................................................................................................................................................................AAGCAAAA--------GGAAAGGAAAG-GAATTC-------.............................................................................................................................................2511.0010000100
..............................................................................................................................................................................................................................................CTGGAAACGAAAGCAAAA--------GGAAAG................................................................................................................................................................2411.0010000100
..................................................................................................................................A-------------------------------------------------TGAGATCACACTGTCATATC----------------------GT..............................................................................................................................................................................................................2311.0011000000
...........................................GCGTGAGGTCTAA--------------------------------------------------------------TT-CGTT---GG............................................................................................................................................................................................................................................................................................................2111.0010001000
.......................................................A--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACA................................................................................................................................................................................................................................................2011.0010000100
............................................................................................................................................................................................................................................................................................................................................................A--------------------AT-CAG--------------------CAG-----GCT-AAAATGGA...............2011.0011000000
...........................TTTGTTGGACCATGCAGCGTGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
........................................................................................................................................................................................ATCACACTGTCATATC----------------------GTCA............................................................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................GCAAAA--------GGAAAGGAAAG-GAATTC-------GT...........................................................................................................................................2511.0010000010
......................................................................................................................................................................................................................................................GAAAGCAAAA--------GGAAAGGAAAG-GA........................................................................................................................................................2311.0011000000
........................................................................................................................................................................................................................................................AAGCAAAA--------GGAAAGGAAAG-GA........................................................................................................................................................2111.0010010000
................................................................................................................................................................................................................................CAAACATCAGGCACCTGGAAACGAA.....................................................................................................................................................................................2511.0010000100
......................................................AA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACT..............................................................................................................................................................................................................................................2311.0010000100
.......................................................A--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCAC.................................................................................................................................................................................................................................................1911.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATCCACATAGTGC...1811.0010000010
..............................GTTGGACCATGCAGCGTGAGGTCT........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.TGTCTGCAGTTGCGGCGAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................................GGAAAGGAAAG-GAATTC-------GTCATT-GTA---------------------------------..................................................................................................2611.0010000100
......................................................AA--------------------------------------------------------------TT-CGTT---GGA-------------------------------------------------TGAGATCACACTGTCAT.........................................................................................................................................................................................................................................2811.0010001000
...........................................................................................................................................................................................................................................................................................................................................................TA--------------------AT-CAG--------------------CAG-----GCT-AAAATGGA...............2111.0010001000
.........................................................................................................................CGTT---GGA-------------------------------------------------TGAGATCACACTGTC...........................................................................................................................................................................................................................................2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................ATCTCAAACTA--------------------AT-CAG--------------------CAG-----GC.........................2111.0011000000
.........GTTGCGGCGAAGCCGAGATTT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
...............................TTGGACCATGCAGCGTGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.............................................................................................................................................................................................................................................................................GGAAAG-GAATTC-------GTCATT-GTA---------------------------------GAGAAA............................................................................................2711.0010000100

Generated: 05/18/2015 at 02:22 AM