| droWil2 | 
	scf2_1100000004585:5152315-5152650 + | 
	dwi_1696 | 
	AGAATGATCCGCAACGGGAATTGCTTATTTATCCAACTGATGATGTTTCGGTGAGTATAAAAA-------------------TGAATGAGACTAAAGA----------AAAGTAAAT-----TCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG-AAATTTCCCAAAGAGAAGAAGAATATAT------------AAGTAGGAAAAACAAAGAAAGTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--ATTGATAAATTATA----------CACAAAGAAAATAAATATTT---------------------ATAGA-T----------------------------------ATAAATCA-------ATTGT-TAATTGCTGAAATGTTAAAGGTGCCATTTCGAGTTAAACAATTACATATTGTTTTTTT------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------TTTGCTTTGTGGTGTTTCTATAGGAGATCATTATGCCTCGCAAGCAACGCACAAATGTCAAATCGGTTGCCGA | 
	| droVir3 | 
	scaffold_12963:15337570-15337628 + | 
	 | 
	TTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGAGATTGTCATGCCGCGTAAGCAGCGCACAAATGTCAAATCGGTGGCGGA | 
	| droMoj3 | 
	scaffold_6500:18315134-18315189 + | 
	 | 
	AAAACGATCCGCAGCGCGAGCTGCTTATCTATCCAGCGGACGATGTCTCGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | 
	| droGri2 | 
	scaffold_15126:4090907-4090962 - | 
	 | 
	AAAATGATCCGCAGCGGGAGTTGCTCATCTATCCAGCAGACGACGTTTCGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | 
	| dp5 | 
	4_group1:4256272-4256367 - | 
	 | 
	AAAATGATCCGCAAAGGGAGTTGCTCATCTATCCAGCAGATGATGTCTCGGTAAGTACCTATAGAACAGATATTTAAAAGAGGATA-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGAAGA | 
	| droPer2 | 
	scaffold_5:952940-953035 + | 
	 | 
	AAAATGATCCGCAAAGGGAGTTGCTCATCTATCCAGCAGATGATGTCTCGGTAAGTACCTATAGAACAGATATTCAAAAGAGGATA-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGAAGA | 
	| droAna3 | 
	scaffold_12916:15399009-15399393 + | 
	dan_742 | 
	AGAATGATCCGCAGAGGGAGCTGCTCATCTATCCGGCTGATGATGTTTCGGTAAGTTGTGAGAAAGTATATTATT-------TCTC------CCAAAAAATTTTAAAATAAATAAACAATCATACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGGGA-TTCTCAGAAAAAAATAAAACAAATCTTTAGCCAATAAAGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAAAAATAAACC-AAATTTCTGGGAATTTTTTT----------AGGCCATTGTGT--------TGTGAGAATTTATGGGAATACG--------------------------------------------TCAGAAAATAAATTAATTATCTTTGGA-TTGGGCATTGAACCTTGTACTATTATTATT----------TCCAAAGTCTAGACTTA------------------------------------ATATT--------T-AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-----TGTTTTTTTTTTTTTAAAGGAAATCATCATGCCCCGGAAACAGCGCTCCAATGCCAAAACGGTGGCCGA | 
	| droBip1 | 
	scf7180000396572:1629585-1629954 + | 
	 | 
	AGAATGATCCGCAGAGGGAGCTGCTCATCTATCCGGCTGATGATGTTTCGGTGAGTATTTACT-------------------TATA------ACACAA--TATTAAAACAAATAAACAATCATACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG-GGA-TTCTCAGAAGAAAATAAAACAAATTTTTGGCTAATAAAGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGATAAATATACTTTGGTTTCTGGGAATTTTTTC----------AGGCCATTGTGT--------TGTGAGAATTTATGGCAGTACG--------------------------------------------TCAGACTATAAATTAATTAAATTTGGAAATGGGCATTGAACCTTATACTATTATTATGTTTTCAAAGGTCCAGAGTCTAGACTTA----------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGCTTGTCTTTCAGGAAATCATCATGCCCCGGAAACAGCGTTCCAACGCCAAAACAGTGGCCGA | 
	| droKik1 | 
	scf7180000301917:24289-24669 - | 
	 | 
	AGAATGATCCCCAGAGGGAGCTGCTCATCTATCCCGCTGACGATGTCTCCGTGAGTAGAGAAAATATATATTTTTAAAGGTGTTTT-----T--------------------------------TG------------------------------------------------------------------------------------------------------------------TGGA------------------------------------------------------------------------------------------------------------------------------AGCAGAAGAAACAAAGAATTTTAAAATGAATTCATGAAATAAAAGATATTTAAATTGGATTTGGGTTTAAAAGGTTTTAAAGTTGTTCTTAAATCGTTGCTACTTTAATTTATATTTAAATTTTCTTCTCACAAAATTATATTTATTTTAACTCAATTTTTAAACTCTTTTTTTCATATAAACACTCC------------------------------------CACAATTGACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---------------ATCCA--------------------------------------------------------TCTCAATATTTATTGAT--------------TTATCCCCTCTCCAGGAGATCATCATGCCCCGCAAGCAACGCACCAATGCCAAATCCGTGGCCGA | 
	| droFic1 | 
	scf7180000454115:224773-225063 - | 
	 | 
	AAAATGATCCGCAGAGGGAGCTGCTCATCTATCCCGCTGACGATGTCTCGGTGAGTATGCAC--------------------------------AAAA----------ATAGACATT----------------------------------------------------------------------------------------------------------ATCAGCA----TTTTAAAAGAAG----------------------------------------------AATAGAAAACATAGTATTTAATTGAATGTTAAAAAG-CCTGAGACCA---------------------------ATAAATAAA-----------------------------TAAATATTAAAATATTTAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGACTTA----------------------------------------------------ATTTGTTAGTTTCATATGGAATGTT---------------------------------------------------------------------------------------------------------------------------TGT-----------------TGTTTATTGACGAATA-----TTTTTCTATTTTTCTACAGGAGATTGTCATGCCTCGCAAACAGCGAACAAATGCCAAATCGGTGGCAGA | 
	| droEle1 | 
	scf7180000491028:1558815-1559227 + | 
	 | 
	AAAATGATCCGCAGAGGGAGCTACTTATATATCCCGCGGATGATGTCTCGGTGAGTAGATAAA-------------------TATTTTAAGAACAAAA----------TAAGGCATT-----TAAAAATAAATAAAAGTGTATTTTAAATTTTGATTTTATTACTATTAATGTAATTGTACTTACTTGTATATATTAGATCTA--------------------TGAAGTA----TTTGAAAAGTAT----------------------------------------------AATTCATAAC------TTTAATCTAATTTTAAAAGG-TATCTCACAAAATAAATGATGTTTTTGT------------AATTAATAT-TATAAAATAAGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAGAGATAATTGA---------------ATCAACTTCCTTTTTA---ATACATTGTTATATGTT------TATGGTGT-----------------TTTTTATTGATAATTA-----TTTTTCATTAACCCACCAGGAGATTATCATGCCGCGAAAGCAGCGAACCAATGCCAAATCCGTGGCCGA | 
	| droRho1 | 
	scf7180000779726:70023-70484 - | 
	 | 
	AAAATGATCCGCAGAGGGAGCTTCTCATTTATCCCGCTGATGATGTCTCGGTGAGTAGAGAAA-------------------CATTTGAATCCCAAAA----------ATAGTCATA-----TAAGAGAAAGGA-------ATTTT----------------------------------------------------TTCAACGAAATAACCAACGATTTATGACAGCAACAATTTTTGAACAAGAAATTATTGTTAATATAAATTAACTAAATATTTATGTTTACTCATAAAAAGAGAACATAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTATTAAAAGGAAAGCTCTGCCTTGCGGAAATAATTTCAATTCAAGTAAATTCAAATTTAGATTTAAGAAATAACTTATTTAATTGTTTTAATATCAACTTCAATTTAAGGCATACTTTTATAGATGTTTTTTAATATGGTGTAAATTAACCTAATATAATACTTACTGACGAATA-----TTTTCTCGTAATCCACCAGGAGATTATTATGCCCCGAAAGCAGCGGACCAATGCCAAATCCGTGGCCGA | 
	| droBia1 | 
	scf7180000302422:9193261-9193338 - | 
	 | 
	AATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATG---------TTATTT--TTTCCACCTAGGAAATTATTATGCCGCGCAAGCAGCGGACCAATGCCAAGTCTGTGGCCGA | 
	| droTak1 | 
	scf7180000415604:74534-74594 + | 
	 | 
	T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCGATAGGAGATTATTATGCCGCGTAAGCAGCGCACCAATGCCAAGTCAGTGGCCGA | 
	| droEug1 | 
	scf7180000409463:683496-683785 - | 
	 | 
	AAAATGACCCGCAGAGGGAGCTGCTCATCTATCCCGCCGATGATGTCTCGGTGAGTGGGGAAA-------------------TATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------AGGAAATTGTAATTTGAATTGGAGAG-ATTTTTGGAAGAACAAATTCACAAATTATAATGTCAATTTGACTAAGATAAAATATATTTTAGAC---------------------------------------------------------TAAGATCA-------AGACT------------------------------------------------------------------------------------------------------------------------TAGATTTAAGAA---TCTTATAAAATTGATT-----------------------------------------------------------------------AGCTTACTCACGAATATACT-TTTCTCCTTCCCCCTTTAGGAGATCATCATGCCGCGCAAACAGCGGAGCAATGCCAAATCCGTGGCCGA | 
	| dm3 | 
	chr2L:7483379-7483459 - | 
	 | 
	TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAATT-----TTCTTTTCTGTTCCGATAGGAAATTATCATGCCCCGCAAGCAGCGAACAAATGCCAAATCAGTGGCGGA | 
	| droSim2 | 
	2l:7237652-7237745 - | 
	 | 
	AAAATGATCCGCAGAGGGAGCTACTCATCTATCCCACAGATGATGTATCGGTGAGTAAAAGAA-------------------TATA-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAATTGACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAGATTATAATC-------------------------------------- | 
	| droSec2 | 
	scaffold_3:2999966-3000029 - | 
	 | 
	AAAATGATCCGCAGAGGGAGTTACTCATCTGTCCCACAGATGATGTATCGGTGAGTGAAATAA-------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | 
	| droYak3 | 
	2L:5413554-5413637 + | 
	 | 
	ATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCATC------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------TA---TACTTTGTGCCCCAATAGGAGATCATCATGCCCCGCAAACAGCGCACCAATGCCAAATCAGTGGCGGA | 
	| droEre2 | 
	scaffold_4929:16403621-16403694 - | 
	 | 
	TTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----TTCTTTTGTGCTCCGATAGGAGATTATCATGCCCCGCAAGCAGCGCACCAATGCCAAATCAGTGGCGGA |