ID:

dwi_1673

 Coordinate:

scf2_1100000004585:3463859-3464009 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.4 -12.4

Flybase annnotation

exon [dwil_GLEANR_8797:6]; CDS [Dwil\GK24663-cds]; intron [Dwil\GK24663-in]

Repeatable elements

NameClassFamilyStrand
BEL-6_DWil-I-intLTRPao+
mature
  1. scf2_1100000012956:379-402 +
  2. scf2_1100000004369:5493-5516 +
  3. scf2_1100000004440:1615-1638 +
  4. dwi_1673  scf2_1100000004585:3463938-3463961 +
  5. scf2_1100000004761:2647-2670 +
  6. scf2_1100000004943:469665-469688 +
  7. scf2_1100000004916:35842-35865 +
  8. scf2_1100000004933:336373-336396 +
  9. scf2_1100000004953:991282-991305 +
  10. scf2_1100000004953:1028016-1028039 +
  11. scf2_1100000004958:1166100-1166123 +
  12. scf2_1100000004958:2642890-2642913 +
  13. scf2_1100000004959:264211-264234 +
  14. scf2_1100000004961:320082-320105 +
  15. scf2_1100000004961:4197300-4197323 +
  16. scf2_1100000004962:431426-431449 +
  17. scf2_1100000004963:4292947-4292970 +
  18. scf2_1100000004967:2441668-2441691 +
  19. scf2_1100000004967:3134166-3134189 +
  20. scf2_1100000004968:1886204-1886227 +
  21. scf2_1100000002738:241-264 +
  22. scf2_1100000002837:114-137 +
  23. scf2_1100000008144:432-455 +
  24. scf2_1100000001557:2471-2494 +
  25. scf2_1100000003037:655-678 +
  26. scf2_1100000001597:4157-4180 +
  27. scf2_1100000014602:865-888 +
  28. scf2_1100000004415:2768-2791 +
  29. scf2_1100000004514:780997-781020 +
  30. scf2_1100000004521:8791668-8791691 +
  31. scf2_1100000000989:2015-2038 +
  32. scf2_1100000004620:53765-53788 +
  33. scf2_1100000004887:130805-130828 +
  34. scf2_1100000004909:5657284-5657307 +
  35. scf2_1100000000370:4187-4210 +
star
  1. scf2_1100000012956:411-433 +
  2. scf2_1100000002837:146-168 +
  3. scf2_1100000001557:2503-2525 +
  4. scf2_1100000004292:461-483 +
  5. scf2_1100000004369:5525-5547 +
  6. scf2_1100000004440:1647-1669 +
  7. scf2_1100000004514:781029-781051 +
  8. scf2_1100000000989:2047-2069 +
  9. dwi_1673  scf2_1100000004585:3463970-3463992 +
  10. scf2_1100000004620:53797-53819 +
  11. scf2_1100000004761:2679-2701 +
  12. scf2_1100000004887:130837-130859 +
  13. scf2_1100000004916:35874-35896 +
  14. scf2_1100000004933:336405-336427 +
  15. scf2_1100000004959:264243-264265 +
  16. scf2_1100000004961:4197332-4197354 +
  17. scf2_1100000004962:431458-431480 +
  18. scf2_1100000004963:4292979-4293001 +
  19. scf2_1100000004967:2441700-2441722 +
  20. scf2_1100000004968:1886236-1886258 +
  21. scf2_1100000002738:273-295 +
  22. scf2_1100000001597:4189-4211 +
  23. scf2_1100000014602:897-919 +
  24. scf2_1100000004521:8791700-8791722 +
  25. scf2_1100000004909:5657316-5657338 +
  26. scf2_1100000000370:4219-4241 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAAAATGTTCCCCACAAAAACTGAAAAACTATTAGCGAAGCAACACGAGTTGCATAAAAGATTAAAAAAGCTAGAAGAGTTAGATGCTAGTAAGTTTACTAGCAAGATTATTAACGAAGTAAATGAGATACAGAAGCTATGGATTAGTTACCATAGTCAAATGCTAGAGAGTGGTGTAACTCAACACTACTATTTCACAGATGGGAAGTATGAGGAAGGTTTAGATATGGCAGCCAAATTACTAGCCAAA
*********************************************************************************************************************************...........((.......((((((..((........))..)))))).....))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V119
head
 V117
male body
.................................................................................................................................TACAGAAGCTATGGATTAGTTACC.................................................................................................. 24 0 20 0.40 8 4 4 0 0
..............................................................................................................................AGATACAGAAGCTATGGATTAGTT..................................................................................................... 24 0 20 0.35 7 7 0 0 0
...........................................................................................................................ATGAGATACAGAAGCTATGGATTAGT...................................................................................................... 26 0 20 0.30 6 0 6 0 0
.................................................................................................................................TACAGAAGCTATGGATTAGTTACCAT................................................................................................ 26 0 20 0.25 5 0 5 0 0
............................................................................................................................TGAGATACAGAAGCTATGGATTAGT...................................................................................................... 25 0 20 0.15 3 0 3 0 0
...........................................................................................................................ATGAGATACAGAAGCTATGGATTAG....................................................................................................... 25 0 20 0.15 3 1 2 0 0
..............................................................................................................................AGATACAGAAGCTATGGATTAGTTACCA................................................................................................. 28 0 20 0.15 3 3 0 0 0
.............................................................................................................................GAGATACAGAAGCTATGAATTAGT...................................................................................................... 24 1 20 0.15 3 0 3 0 0
.................................................................................................................................................................ATGCTAGAGAGTGGTGTAACTCA................................................................... 23 0 20 0.15 3 1 1 0 1
........................................................................................................................TAAATGAGATACAGAAGCTATGGAT.......................................................................................................... 25 0 20 0.15 3 0 3 0 0
.............................................................................................................................GAGATACAGAAGCTATGGATT......................................................................................................... 21 0 20 0.10 2 2 0 0 0
..............................................................................................................................AGATACAGAAGCTATGGATTAGT...................................................................................................... 23 0 20 0.10 2 2 0 0 0
......................................................................................................................................................................................................CAGATGGGAAGTATGAGGAAG................................ 21 0 20 0.10 2 0 0 1 1
.............................................................................................................................GAGATACAGAAGCTATGGATTAGTT..................................................................................................... 25 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................TAACTCAACACTACTATTTCACAGA................................................. 25 0 20 0.10 2 2 0 0 0
........................................................................................................................TAAATGAGATACAGAAGCTAT.............................................................................................................. 21 0 20 0.10 2 0 2 0 0
.........................AAAACTATTAGCGAAGCAACACGA.......................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0
.......................................................................................................................................................................................AACACTACTATTTCACAGATGGG............................................. 23 0 20 0.10 2 2 0 0 0
..............................................................................................................................AGATACAGAAGCTATGGATTAG....................................................................................................... 22 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................................................TATGAGGAAGGTTTAGATATGGCAGC................ 26 0 20 0.10 2 0 1 1 0
.............................................................................................................................................................TCAAATGCTAGAGAGTGGTGTAACT..................................................................... 25 0 20 0.05 1 0 1 0 0
................................................................................................................................ATACAGAAGCTATGGATTAGT...................................................................................................... 21 0 20 0.05 1 0 0 1 0
....................................................................................................................................................................................................CACAGATGGGAAGTATGAGGAAGGT.............................. 25 0 20 0.05 1 0 1 0 0
...............................................................................................................................GATACAGAAGCTATGGATTAGTTA.................................................................................................... 24 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................................TATGAGGAAGGTTTAGATATGGCAG................. 25 0 20 0.05 1 0 1 0 0
.....................................................................................................................................................................................................ACAGATGGGAAGTATGAGGAAG................................ 22 0 20 0.05 1 1 0 0 0
..................................AGCGAAGCAACACGAGTTGCATAAAAG.............................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0
...............................................................TAAAAAAGCTAGAAGAGTTAGATGC................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0
.................................................................................................................................TACAGAAGCTATGGATTAGTTACCATA............................................................................................... 27 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................TGCTAGAGAGTGGTGTAACTCA................................................................... 22 0 20 0.05 1 1 0 0 0
.............................CTATTAGCGAAGCAACACGAGT........................................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0
.................AAAACTGAAAAACTATTAGCGAAGCA................................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................................GGTTTAGATATGGCAGCCAAATTACT....... 26 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................TTTCACAGATGGGAAGTATG...................................... 20 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................................ACTCAACACTACTATTTCACAGA................................................. 23 0 20 0.05 1 1 0 0 0
................................TTAGCGAAGCAACACGAGTTG...................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0
................................................................................................................................................................................................................GTATGAGGAAGGTTTAGATATGG.................... 23 0 20 0.05 1 1 0 0 0
..............................TATTAGCGAAGCAACACGAGTTGC..................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................AACACTACTATTTCACAGATGGGA............................................ 24 0 20 0.05 1 1 0 0 0
.................................................................................................................AACGAAGTAAATGAGATACAGAAGC................................................................................................................. 25 0 20 0.05 1 0 0 1 0
...........TCCCCAAAAACTGAAAAACTATTAGCG..................................................................................................................................................................................................................... 27 2 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................GGAAGGTTTAGATATGGCAGCCA.............. 23 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................TAGATATGGCAGCCAAATTACTAGC.... 25 0 20 0.05 1 0 1 0 0
..........................................................................................................................................................TAGTCAAATGCTAGAGAGTGGTGT......................................................................... 24 0 20 0.05 1 0 1 0 0
.....................................................................AGCTAGAAGAGTTAGATA.................................................................................................................................................................... 18 1 20 0.05 1 0 1 0 0
........................................................................................................................TAAATGAGATACAGAAGCTATGGA........................................................................................................... 24 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................AGATATGGCAGCCAAATTACTAG..... 23 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................TAACTCAACACTACTATTTCACAGAT................................................ 26 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................GGAAGGTTTAGATATGGCAGCCAAAA........... 26 1 20 0.05 1 1 0 0 0
.............................................................................................................................................................TCAAATGCTAGAGAGTGGTGTA........................................................................ 22 0 20 0.05 1 0 1 0 0
.................................................................................................................................TACAGAAGCTATGGATTAGTTACCA................................................................................................. 25 0 20 0.05 1 0 0 0 1
.........................AAAACTATTAGCGAAGCAACACGAGT........................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0
.......................................................................................................................................................................................AACACTACTATTTCACAGATGGGAAGTA........................................ 28 0 20 0.05 1 1 0 0 0
.........................................................................AGAAGAGTTAGATGCTAGTAAG............................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
............................................................................................AAGTTTACTAGCAAGATTATTAACGAA.................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
..............................................................................................................................AGATACAGAAGCTATGGATTAGTTA.................................................................................................... 25 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................................TACTATTTCACAGATGGGAAGTAT....................................... 24 0 20 0.05 1 0 1 0 0
............................................................................................................................TGAGATACAGAAGCTATGGATTAG....................................................................................................... 24 0 20 0.05 1 0 1 0 0
................................TTAGCGAAGCAACACGAGTTGCA.................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
.........................AAAACTATTAGCGAAGCAACACG........................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................ATGCTAGAGAGTGGTGTAACTCAACACTA............................................................. 29 0 20 0.05 1 0 0 0 1
.............................................................ATTAAAAAAGCTAGAAGCG........................................................................................................................................................................... 19 1 20 0.05 1 0 1 0 0
....................................................................................................................................................................................................CACAGATGGGAAGTATGAGGAAG................................ 23 0 20 0.05 1 0 1 0 0
......................................................................................................................................AAGCTATGGATTAGTTACCATAG.............................................................................................. 23 0 20 0.05 1 0 1 0 0
.......................................................................................................................GTAAATGAGATACAGAAGCTATGGAT.......................................................................................................... 26 0 20 0.05 1 0 1 0 0
..........................................................................................................................AATGAGATACAGAAGCTATGGAT.......................................................................................................... 23 0 20 0.05 1 1 0 0 0
............................................................................................................................CGAGATACAGAAGCTATGGATTAGT...................................................................................................... 25 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................TGAGGAAGGTTTAGATATGGCAGC................ 24 0 20 0.05 1 0 1 0 0
....................................................................................................................................................................................CTCAACACTACTATTTCACAGATG............................................... 24 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................ATGCTAGAGAGTGGTGTAACTCAA.................................................................. 24 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................GTGTAACTCAACACTACTATTTC...................................................... 23 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................................GTTTAGATATGGCAGCCAAATTAC........ 24 0 20 0.05 1 1 0 0 0
.................AAAACTGAAAAACTATTAGCGAAGC................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................................................................AAGGTTTAGATATGGCAG................. 18 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................ATGGGAAGTATGAGGAAGGTTTAGA......................... 25 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

GTTTTTACAAGGGGTGTTTTTGACTTTTTGATAATCGCTTCGTTGTGCTCAACGTATTTTCTAATTTTTTCGATCTTCTCAATCTACGATCATTCAAATGATCGTTCTAATAATTGCTTCATTTACTCTATGTCTTCGATACCTAATCAATGGTATCAGTTTACGATCTCTCACCACATTGAGTTGTGATGATAAAGTGTCTACCCTTCATACTCCTTCCAAATCTATACCGTCGGTTTAATGATCGGTTT
*******************************************************************...........((.......((((((..((........))..)))))).....))********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 M020
head
 V117
male body		 V119
head
............................................................................................................................................................................ACCACATTGAGTTGTGATGATAAAGTGT................................................... 28 0 20 9.10 182 174 8 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACCTAATCAAT.................................................................................................... 27 0 20 5.30 106 106 0 0 0 0
...............................................................................................................................................................................ACATTGAGTTGTGATGATAAAGTGT................................................... 25 0 20 4.00 80 80 0 0 0 0
......................................................................CGATCTTCTCAATCTACGATCATTCAAA......................................................................................................................................................... 28 0 20 3.85 77 0 77 0 0 0
.....................................................................TCGATCTTCTCAATCTACGATCAT.............................................................................................................................................................. 24 0 20 1.65 33 33 0 0 0 0
...................................................................................................................................................................................TGAGTTGTGATGATAAAGTGTCT................................................. 23 0 20 1.00 20 0 20 0 0 0
.............................................................................................................................CTCTATGTCTTCGATACCTAATCAAT.................................................................................................... 26 0 20 0.80 16 16 0 0 0 0
....TTACAAGGGGTGTTTTTGACTTTTT.............................................................................................................................................................................................................................. 25 0 20 0.75 15 15 0 0 0 0
..........................................................................CTTCTCAATCTACGATCATTCAA.......................................................................................................................................................... 23 0 20 0.75 15 0 15 0 0 0
.....................................................................TCGATCTTCTCAATCTACGATCATTCAAA......................................................................................................................................................... 29 0 20 0.75 15 0 15 0 0 0
...TTTACAAGGGGTGTTTTTGACTT................................................................................................................................................................................................................................. 23 0 20 0.70 14 12 2 0 0 0
........................................................................................................................................................................................................................TTCCAAATCTATACCGTCGGTTTAAT......... 26 0 20 0.65 13 0 13 0 0 0
.................................................................................................................................................................................ATTGAGTTGTGATGATAAAGTGTCT................................................. 25 0 20 0.55 11 11 0 0 0 0
.............................................................................................................................................................................CCACATTGAGTTGTGATGATAAAGTGT................................................... 27 0 20 0.55 11 0 11 0 0 0
GTTTTTACAAGGGGTGTTTTTGACTT................................................................................................................................................................................................................................. 26 0 20 0.55 11 5 6 0 0 0
...............................................................................................................................................................................ACATTGAGTTGTGATGATAAAGTGTCT................................................. 27 0 20 0.55 11 9 2 0 0 0
....TTACAAGGGGTGTTTTTGACTTTT............................................................................................................................................................................................................................... 24 0 20 0.50 10 10 0 0 0 0
.......................................................................................................................................................................CTCTCACCACATTGAGTTGTGATGAT.......................................................... 26 0 20 0.45 9 0 9 0 0 0
.................................................................................................................................ATGTCTTCGATACCTAATCAATGGT................................................................................................. 25 0 20 0.45 9 0 9 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACCTAATCAA..................................................................................................... 26 0 20 0.40 8 8 0 0 0 0
.......................................................................................................................................................................................................................CTTCCAAATCTATACCGTCGGTTTAAT......... 27 0 20 0.40 8 0 8 0 0 0
.........................................................................................................................................................................................................................TCCAAATCTATACCGTCGGTTTAAT......... 25 0 20 0.40 8 6 0 2 0 0
........................................................................................................................................................................................TGTGATGATAAAGTGTCTACCCTTCAT........................................ 27 0 20 0.35 7 3 4 0 0 0
..TTTTACAAGGGGTGTTTTTGACTTTT............................................................................................................................................................................................................................... 26 0 20 0.35 7 7 0 0 0 0
.....................................................................................................................................................................................................................TCCTTCCAAATCTATACCGTCGGTTT............ 26 0 20 0.35 7 0 7 0 0 0
.............................................................................................TCAAATGATCGTTCTAATAATTGCTT.................................................................................................................................... 26 0 20 0.35 7 4 3 0 0 0
...............................................................................................................................CTATGTCTTCGATACCTAATCAAT.................................................................................................... 24 0 20 0.35 7 0 7 0 0 0
...........................................TGTGCTCAACGTATTTTC.............................................................................................................................................................................................. 18 0 20 0.30 6 0 6 0 0 0
.............................................................................................................................................................................ACACATTGAGTTGTGATGATAAAGTGT................................................... 27 1 20 0.30 6 6 0 0 0 0
.........................................................................................................................................................................................GTGATGATAAAGTGTCTACCCTTCAT........................................ 26 0 20 0.25 5 0 5 0 0 0
.............................................................................................................................................................................CCACATTGAGTTGTGATGATAAAGT..................................................... 25 0 20 0.25 5 5 0 0 0 0
...........................................TGTGCTCAACGTATTTTCTAATTTT....................................................................................................................................................................................... 25 0 20 0.25 5 1 4 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACTTAATCAAT.................................................................................................... 27 1 20 0.25 5 5 0 0 0 0
.....................................................................................................................................................................ATCTCTCACCACATTGAGTTGTGATGAT.......................................................... 28 0 20 0.25 5 0 5 0 0 0
.......................................................................................................................................................GGTATCAGTTTACGATCTCTCACCACAT........................................................................ 28 0 20 0.25 5 0 5 0 0 0
..........GGGGTGTTTTTGACTTTTTGATAAT........................................................................................................................................................................................................................ 25 0 20 0.25 5 0 5 0 0 0
.........................................................................................................TCTAATAATTGCTTCATTTACTCTAT........................................................................................................................ 26 0 20 0.20 4 4 0 0 0 0
........................................................................................................................................................................................................CTACCCTTCATACTCCTTCCAAATCT......................... 26 0 20 0.20 4 1 3 0 0 0
..........................................................................................................................................................................................................ACCCTTCATACTCCTTCCAAATCTA........................ 25 0 20 0.20 4 0 4 0 0 0
...................................................................................................................................................................................TGAGTTGTGATGATAAAGTGTCTAC............................................... 25 0 20 0.20 4 4 0 0 0 0
..............................................................................................................................................................................CACATTGAGTTGTGATGATAAAGTG.................................................... 25 0 20 0.20 4 0 4 0 0 0
..........................................................................CTTCTCAATCTACGATCATT............................................................................................................................................................. 20 0 20 0.20 4 0 4 0 0 0
..........................................................................CTTCTCAATCTACGATCAATCAAAT........................................................................................................................................................ 25 1 20 0.20 4 0 4 0 0 0
...............................................................................................................AATTGCTTCATTTACTCTATGTCT.................................................................................................................... 24 0 20 0.15 3 0 3 0 0 0
.......................................................................................................................CATTTACTCTATGTCTTCGATACCTAAT........................................................................................................ 28 0 20 0.15 3 3 0 0 0 0
..ATTTACAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 25 1 20 0.15 3 3 0 0 0 0
.....................................................................................................................................................................................................................TCCTTCCAAATCTATACCGTCGGTTTAAT......... 29 0 20 0.15 3 0 3 0 0 0
GTTTTTACAAGGGGTGTTTTTGACT.................................................................................................................................................................................................................................. 25 0 20 0.15 3 0 3 0 0 0
......................................................................................................................................................................................................GTCTACCCTTCATACTCCTTCCAAATCT......................... 28 0 20 0.15 3 0 3 0 0 0
...............................................................................................................................................................................................................TCATACTCCTTCCAAATCTATACCGT.................. 26 0 20 0.15 3 3 0 0 0 0
.............................................................................................TCAAATGATCGTTCTAATAATTGCT..................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0
.............................................................................................TCAAATGATCGTTCTAATAATTGCTTCAT................................................................................................................................. 29 0 20 0.15 3 0 3 0 0 0
..............................................................................................................................................................................CACATTGAGTTGTGATGATAAAGTGTC.................................................. 27 0 20 0.15 3 2 1 0 0 0
..........................................................................................................................................................................TCACCACATTGAGTTGTGATGATAAAG...................................................... 27 0 20 0.15 3 0 3 0 0 0
...................................................................................................................................GTCTTCGATACTTAATCAATGGTAT............................................................................................... 25 1 20 0.15 3 0 3 0 0 0
...................................................................................................................................................................................TGAGTTGTGATGATAAAGTGTCTACCCT............................................ 28 0 20 0.15 3 0 3 0 0 0
...............................................................................................................AATTGCTTCATTTACTCTATGTCTT................................................................................................................... 25 0 20 0.15 3 1 2 0 0 0
..........................................................................................................................................................................TCACCACATTGAGTTGTGATGATAAAGT..................................................... 28 0 20 0.15 3 0 3 0 0 0
....................TGACTTTTTGATAATCGCTTCGTTGT............................................................................................................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0
........................................................................................................................................................GTATCAGTTTACGATCTCTCACCACAT........................................................................ 27 0 20 0.10 2 0 2 0 0 0
..........................................................................................................................................................................TCACCACATTGAGTTGTGATGATAA........................................................ 25 0 20 0.10 2 1 1 0 0 0
..........GGGGTGTTTTTGACTTTT............................................................................................................................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0
.............................................................................................................ATAATTGCTTCATTTACTCTATGTCT.................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................TACTCTATGTCTTCGATACCTAATCAAT.................................................................................................... 28 0 20 0.10 2 2 0 0 0 0
.........................................................TTTCTAATTTTTTCGATCTTCTCAAT........................................................................................................................................................................ 26 0 20 0.10 2 0 2 0 0 0
...................................................................................................................................................................................TGAGTTGTGATGATAAAGTGTC.................................................. 22 0 20 0.10 2 0 2 0 0 0
......ACAAGGGGTGTTTTTGACTTTT............................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0
...........................................TGTGCTCAACGTATTTTCTAATTTTTT..................................................................................................................................................................................... 27 0 20 0.10 2 1 1 0 0 0
GTTTTTACAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
..............................................................................................................TAATTGCTTCATTTACTCTATGTCTT................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0
..............................................................................................................................TCTATGTCTTCGATACCTAAT........................................................................................................ 21 0 20 0.10 2 0 2 0 0 0
.............................................................................................................................................................................TCACATTGAGTTGTGATGATAAAGTGT................................................... 27 1 20 0.10 2 2 0 0 0 0
..............TGTTTTTGACTTTTTGATAATCGCTT................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
...........................................TGTGCTCAACGTATTTTCTAATTTTT...................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.........AGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 18 0 20 0.10 2 2 0 0 0 0
......ACAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 21 0 20 0.10 2 0 2 0 0 0
..........................................................TTCTAATTTTTTCGATCTTCTCAAT........................................................................................................................................................................ 25 0 20 0.10 2 0 2 0 0 0
.........................................GTTGTGCTCAACGTATTTTCTAAT.......................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................................CACATTGAGTTGTGATGATAAAGTGTCT................................................. 28 0 20 0.10 2 0 2 0 0 0
.........................................................................................................................................................................................................................................CGGTTTAATGATCGGTTT 18 0 20 0.10 2 0 2 0 0 0
...................................CGCTTCGTTGTGCTCAAGGTATTTT............................................................................................................................................................................................... 25 1 20 0.10 2 1 1 0 0 0
..........................................................................................................................TTACTCTATGTCTTCGATACCTAATCAAT.................................................................................................... 29 0 20 0.10 2 0 2 0 0 0
........AAGGGGTGTTTTTGACTTTTTGATAAT........................................................................................................................................................................................................................ 27 0 20 0.10 2 0 1 0 0 1
..........................................................................................CATTCAAATGATCGTTCTAATAAT......................................................................................................................................... 24 0 20 0.10 2 1 1 0 0 0
.........AGGGGTGTTTTTGACTTTTTGATAAT........................................................................................................................................................................................................................ 26 0 20 0.10 2 0 2 0 0 0
.............GTGTTTTTGACTTTTTGATAATCGCTT................................................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
.............................................................................................................................................................................CCACATTGAGTTGTGATGATAAAG...................................................... 24 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................................................................ACATTGAGTTGTGATGATAAAGT..................................................... 23 0 20 0.10 2 1 1 0 0 0
................................................................................................................................................................TTACGATCTCTCACCACATTGAGT................................................................... 24 0 20 0.10 2 2 0 0 0 0
........................................................................................................................................................................................................CTACCCTTCATACTCCTTCCAAATCTAT....................... 28 0 20 0.10 2 0 2 0 0 0
.....................................................................................................................................................................................................TGTCTACCCTTCATACTCCTTCCAAAT........................... 27 0 20 0.10 2 0 2 0 0 0
......................................................................CGATCTTCTCAATGTACGATCATTCAAAT........................................................................................................................................................ 29 1 20 0.05 1 0 1 0 0 0
.AATTTACAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 26 2 20 0.05 1 1 0 0 0 0
..................TTTGACTTTTTGATAATCGCTTCGT................................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
.........AGGGGTGTTTTTGACTTTTTGATAA......................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................CCACATTGAGTTGTGATAATAAAGTGT................................................... 27 1 20 0.05 1 1 0 0 0 0
.............................................................................................TCAAATGATCGTTCTAATAATTGC...................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................CCCACATTGAGTTGTGATGATAAAGTGT................................................... 28 1 20 0.05 1 1 0 0 0 0
................................................TCAACGTATTTTCTAATTTTTTCGATCT............................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.....................................................................TCGATCTCCTCAATCTACGATCATTCAA.......................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
.......................................TCGTTGTGCTCAACGTATTTTCTCTTC......................................................................................................................................................................................... 27 3 20 0.05 1 0 1 0 0 0
........AAGGGGTATTTTTGACTTTTTGATAAT........................................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................ATCACATTGAGTTGTGATGATAAAGTGT................................................... 28 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................TGAGTTGTGACGATAAAGTGTCT................................................. 23 1 20 0.05 1 1 0 0 0 0
....................TGACTTTTTGATAATCGCTTC.................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................ATTGAGTTGTGATGATAAAGTGTTT................................................. 25 1 20 0.05 1 1 0 0 0 0
.........AGGGGTGTTTTTGACTTTTTGAT........................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................TGTCTTCGATACTTAATCAATGGTAT............................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................CAATGGTATCAGTTTACGATCTCT................................................................................ 24 0 20 0.05 1 0 1 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACCTAATCA...................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................ATGTCTTCGATACCTAATCAATGGTAT............................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..........................................................................CTTCTCAATCGACGATCATTCAAAT........................................................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0
...............................................................................................AAATGATCGTTCTAATAATTGCTT.................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
....................................................................TTCGATCTTCTCAATCTACGATCAT.............................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
............................................................................................................................ACTCTATTTCTTCGATACCTAATCAAT.................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
......................................................................................................CGTTCTAATAATTGCTTCATTTACT............................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
.........AGTGGTGTTTTTGACTTTTTGATAAT........................................................................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0
............................................GTGCTCAACGTATTTTCTAATTTT....................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.................................ATCGCTTCGTTGTGCTCAAGGTATTTT............................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACCTAATCAATG................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................ACATTCAGTTGTGATGATAAAGTGT................................................... 25 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................ACCACATTGAGTTGTGATG............................................................ 19 0 20 0.05 1 0 1 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACCTAATCGAT.................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................TGAGTTGTGATGATAAAGTGTCTA................................................ 24 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................CATTGAGTTGTGATGATAAAGTGT................................................... 24 0 20 0.05 1 0 0 1 0 0
.........................................................................TCTTCTCAATCTACGACCATTCAAAT........................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................................CTATACCGTCGGTTTAATGATCGGT.. 25 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................TGGTATCAGTTTACGATCTCTCACCACAT........................................................................ 29 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................ACCCTTCATACTCCTTCCAAATCT......................... 24 0 20 0.05 1 0 1 0 0 0
............................................GTGCTCAACGTATTTTCTAATT......................................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................CTTCATACTCCTTCCAAATCTAT....................... 23 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................CTCTATGTCTTCGATACCTAA......................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................................ATAAAGTGTCTACCCTTCATACTCCTT................................. 27 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................ACCACATTGAGTTGTGAT............................................................. 18 0 20 0.05 1 1 0 0 0 0
...........GGGTGTTTTTGACTTTTTGATAAT........................................................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................ACCCTTCATACTCCTTCCAAATCTAT....................... 26 0 20 0.05 1 1 0 0 0 0
..........................................................................CTTCTCAATCTACGATCATTCAAATTAT..................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................TCCAAATCTATACTGTCGGTTTAAT......... 25 1 20 0.05 1 0 0 1 0 0
......................................................................................................CGTTCTAATAATTGCTTCATTTACTCTAT........................................................................................................................ 29 0 20 0.05 1 0 1 0 0 0
..................................................................................................TGATCGTTCTAATAATTGCTTCATT................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
..........................................................................CTTCTCAATCTACGATCA............................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................TGTGATGATAAAGTGTCTACCCTTCA......................................... 26 0 20 0.05 1 0 1 0 0 0
.......................................TCGTTGTGCTCAACGTATTTTCTAAT.......................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
.....................................................................................................TCGTTCTAATAATTGCTTCAT................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
..........................................................................CTTCTCAATCTACGATCATTCAAAT........................................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 1
..........................................................................................................................TTACTCTATGTCTTCGATACCTAA......................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................GTGTCTACCCTTCATACTCCTTC................................ 23 0 20 0.05 1 0 1 0 0 0
...............................................................ATTTTTTCGATCTTCTCAATCTAC.................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
............................................................................................................................ACTCTATGTCTTCGATACCAAAT........................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
..........GGGGTGTTTTTGACTTTTTGATAATCGC..................................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
...................................................................................................GATCGTTCTAATAATTGCTTCAT................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................TCCAAATCTATACCGTCGGTT............. 21 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................GTGTCTACCCTTCATACTCCTTCCAAAT........................... 28 0 20 0.05 1 0 1 0 0 0
...........................................................TCTAATTTTTTCGATCTTCTCAATCTAC.................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................TCTATGTCTTCGATACATAATCAATGGT................................................................................................. 28 1 20 0.05 1 0 1 0 0 0
.AATTTACAAGGGGTGTTTTTGACT.................................................................................................................................................................................................................................. 24 2 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................CTCACCACATTGAGTTGTGATGATAAAG...................................................... 28 0 20 0.05 1 0 1 0 0 0
...........................................................................TTCTCAATCTACGATCATTCAAATG....................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
...........................................TGTGCTCAACGTATTTTCT............................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................ACATTGAGTTGTGATGATAAGGTGT................................................... 25 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................TCTATGTCTTCGATACCTAATCAATGG.................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................AATCAATGGTATCAGTTTACGAT.................................................................................... 23 0 20 0.05 1 0 1 0 0 0
.........................................................................................................TCTAATAATTGCTTCATTTACTCTATGT...................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................ATGTCTTCGATACTTAATCAATGGTAT............................................................................................... 27 1 20 0.05 1 0 1 0 0 0
...........GGGTGTTTTTGACTTTTTGATAATCGCT.................................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................TTCGATACCTAATCAATGGTAT............................................................................................... 22 0 20 0.05 1 0 1 0 0 0
................................................................TTTTTTCGATCTTCTCAATCT...................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................CACCACATTGAGTTGTGATGGTAAAGT..................................................... 27 1 20 0.05 1 0 1 0 0 0
............................................................................................................AATAATTGCTTCATTTAC............................................................................................................................. 18 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................GTCTACCCTTCATACTCCTTCCAAATCTA........................ 29 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................CTTCATACTCCTTCCAAATCTATACCG................... 27 0 20 0.05 1 0 1 0 0 0
.........................................................................................................TCTAATAATTGCTTCATCTACTCTATGT...................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................AAAGTGTCTACCCTTCATACTCCTTCC............................... 27 0 20 0.05 1 0 1 0 0 0
............................................................................................................AATAATTGCTTCATTTACTCTATGTCT.................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
............GGTGTTTTTGACTTTTTGATAATCGCT.................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
...ATTACAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................CTATGTCTTCGATACGTAATCAATGGT................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
..ATTTACAAGGGGTGTTTTTGACTT................................................................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................CTCTCACCACGTTGAGTTGTGATGAT.......................................................... 26 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................GATAAAGTGTCTACCCTTCATACTCCT.................................. 27 0 20 0.05 1 1 0 0 0 0
............................................................................TCTCAATCTACGATAATTCAAATGAT..................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................ACCACATTGAGTTGTGATGATAAAGT..................................................... 26 0 20 0.05 1 0 1 0 0 0
...........GGGTGTTTTTGACTTTTTGATAATCGC..................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................CCACATTGAGTTGTGAAGATAAAGTGT................................................... 27 1 20 0.05 1 1 0 0 0 0
..............................................................................TCAATCTACGATCATTCAAATGAT..................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
...........................................................................................................AAATAATTGCTTCATTTACTCTATGTCT.................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0
.........................................................................................TCATTCAAATGATCGTTCTAAT............................................................................................................................................ 22 0 20 0.05 1 0 1 0 0 0
.......................................................................................GATCATTCAAATGATCGTTCTAATAAT......................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................TCGCCACATTGAGTTGTGATGATAAAGT..................................................... 28 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................GTACTCAATGTCTTCGTTAC............................................................................................................. 20 3 20 0.05 1 0 1 0 0 0
..........................................................................CTTCTCAATCTACGATCAT.............................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................ATACTCCTTCCAAATCTATACCGTCGGT.............. 28 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................ACCACATTGAGTTGTGATGATAA........................................................ 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................TGTCTTCGATACCTAATCAATGGTAT............................................................................................... 26 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................ACAGTGAGTTGTGATGATAAAGT..................................................... 23 1 20 0.05 1 0 1 0 0 0
............GGTGTTTTTGACTTTTTGATAATCGCTT................................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................CTCCTTCCAAATCTATACCGTCGGTTTC........... 28 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................TTACTCTATGTCTTCGATACCTAATC....................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................................................ATCCAAATCTATACCGTCGGTTTAAT......... 26 1 20 0.05 1 0 1 0 0 0
..............................................GCTCAACGTATTTTCTAATTTTTT..................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
..................................................................................................................TGCTTCATTTACTCTATGTCTTCG................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
............................................................................TCTCAATCTACGATCATTCAAAGAT...................................................................................................................................................... 25 3 20 0.05 1 0 1 0 0 0
...........................................................................CTCTCAATCTACGATCATTCAAAT........................................................................................................................................................ 24 1 20 0.05 1 0 1 0 0 0
..TTTTACAAGGGGCGTTTTTGACTT................................................................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
..................................................................................................................TGCTTCATTTACTCTATGTATTCGAT............................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
..........................................................................CTTCTCAATCTACGACCATTCAAAT........................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................ACCACATTGAGTTGTGATGATAAAGCGT................................................... 28 1 20 0.05 1 1 0 0 0 0
..........................................TTGTGCTCAACGTATTTTCTAAT.......................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.......AAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0
..........................................................................CTTCTCAATCCACGATCATTCAAATGA...................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
.........................................GTTGTGCTCAACGTATTTTCTAATTT........................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................ACATTGAGTTGTGATGATAAAGTGTCTA................................................ 28 0 20 0.05 1 0 1 0 0 0
..........................................................................CTTCTCAATCTACGATCATTCTAATGAT..................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................ACCCTTCATACTCCTTCCAAATCTATAC..................... 28 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................ACATTGAGTTGTGAAGATAAAGTGT................................................... 25 1 20 0.05 1 1 0 0 0 0
..................................................................................................................TGCTTCATTTACTCTATGTCTTCGA................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
........................................CGTTGTGCTCAACGTGTTTTCTAATTT........................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................TCCAAATCTATACCGTCGGTTTAATGAT...... 28 0 20 0.05 1 0 0 0 1 0
...............................................................................................................................................................TTTACGATCTCTCACCACATTGAGT................................................................... 25 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................................CTCTCACCACATTGAGTTGTGATGA........................................................... 25 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................CCACATTGAGTTGTGATGAT.......................................................... 20 0 20 0.05 1 0 0 0 1 0
..............................................................................................................................................................................CACATTGAGTTGCGACGATAAAGTGT................................................... 26 2 20 0.05 1 0 1 0 0 0
.................................................................TTTTTCGATCTTCTCAATCTACGATCAT.............................................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................GGTATCAGTTTACGATCTCTCACCAC.......................................................................... 26 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................................ATCTATACCGTCGGTTTAATGAT...... 23 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................TGTCTACCCTTCATACTCCTTCCAAA............................ 26 0 20 0.05 1 0 1 0 0 0
.........AGGGGTGTTTTTGACTTTTTGA............................................................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................CCTAATCAATGGTATCAGTTTACGAT.................................................................................... 26 0 20 0.05 1 0 1 0 0 0
.........................................................................TCTTCTCAATCTACGATCAT.............................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................ACCACATTGAGTTGTGATGATAAAGC..................................................... 26 1 20 0.05 1 1 0 0 0 0
GTTTTTACAAGGGGTGTTTTTTTCTT................................................................................................................................................................................................................................. 26 2 20 0.05 1 1 0 0 0 0
................................AATCGCTTCGTTGTGCTCAAGGTATT................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................................CCAAATCCATACCGTCGGTTTAATGAT...... 27 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................TTACTCTATGTCTTCGATACCT........................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................ATTGAGTTGTGATGATAAAGTGTCTA................................................ 26 0 20 0.05 1 1 0 0 0 0
.........................................CGTTTGCTCAACGTATTTTCTAAT.......................................................................................................................................................................................... 24 3 20 0.05 1 0 1 0 0 0
.......CAAGGGGTGTTTTTGACTTT................................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................ACACCACATTGAGTTGTGATGATAAAGT..................................................... 28 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................ACCTAATCAATGGTATCAGTTTACG...................................................................................... 25 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................TTACGATCTCTCACCACATTGAGTT.................................................................. 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TGATGATAAAGTGTCTACCCTTCAT........................................ 25 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004585:3463809-3464059 + dwi_1673 CA----------A----------AAATGTTCCCCACAAAAACTGAAAAACTATTAGCGAAG--CAACACGAGTTGCATAAAAGATTAAAAAAGC--------TAGAAGAGTTAGATGCTAGTAA---GTTTACTAGCAAGATTATT-AACGAAGTAAATGAGATACAGAAGCTATGGATTAGTTACCATAGTCAAATGCTAGAGAGTGGTGTAACTCAACACTACTATTTCACAGATGGGAAGTATGAGGAAGGTTT---AGATATGGCAGCCAAATTA--------------------------CTAG-CCAAA-------
droVir3 scaffold_12949:97439-97501 + CA----------G----------AAGTGAGACCCATAA---------AGCCACGCTAAAAAATTAGGCAGGTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATG---------------------TAA-----AATTAAAAAA-------
droMoj3 scaffold_6491:347701-347945 + AA----------A----------AAATGCTCTCAGAAAAAGTTATAAAGCTTTTGAAAATG--CAATCGGACTTAGTGTCCAGATTGAAAAAAT--------TTGACTCATCTGAAGAAATTAG---GCCACCGAGCGAAATTTTA-GGAGAGTTAGAAAAAATAAAAGAAGAGTTAGAAAATAATCATACTTAATTGTTAAAAGTAGGGGTAATAGACCATGCATACTTTAACAATAAGGAATTTGATAAAGCA---------ATGAAAAGCATAAAA--------------------------GATT-TGAAA-------
droPer2 scaffold_945:4082-4318 + CT----------A----------AGATGTTGTCGGAACAAATAATTAAGCTATTAGAGGCT--CAAGCAGCGATAGCAAGGGAGATTAAAAAGA--------TT---------GAAGCTGGTCA---TTTGACCAGCGATGTAATC-CAAAGGTTAGGAGACCTTAAAAACAAAGTTACAGGCAATAATTCTGCACTGTTAACATATGGAGTAGTCGATCATGACTACTAGAG-AGACAGCAGTACGAAAAAATG---------ATTAAAAATATA---------------------GAG-----GACATACA------TAA
droAna3 scaffold_13448:5006-5153 - CGGAACCATTTCCGCTCGTTTAGAAGTATAGCC---------CATAAAGCTATGCGAAACAA-TAGGTAGGATAAATGTAAAAAAACAAAAAAAAAATATATAAGAAAGAATA--------------------------------------GATGAGA------------------------------------------------------------------------------------------AGTAATTCGATAA----GTAAATTTAGT---------------------GAC-----GAAATAGG------TGA
droKik1 scf7180000302368:17776-18019 + TATACAAA----A----------AAATGATGTCAGACAAAACTTTAGAGTTGCTAAAGGCG--CAGTCCGGAATCATTTTGGAAATGAGGCAGG--------TA---------GAAGCTAAAGTAGGGTTAACCAAACCAGACATA-GTAAGGTTAGAAGAGCTTCAGAAACTCTTCATAACAAATCATACGTTACTATTGAA-------------GATCATGAGTACTTTAACTCGAAACAATATGACGTAATA---------ATAATGGTCCTGGCACAAATCAAATT---------A-----AGAT-TTGAA-------
droFic1 scf7180000454072:3737-3987 - TA----------A----------TAATGATTTCGGAAAAAACTATAGATTTGCTAAAGAAG--CAGTCCGGGATTATTTTGGAAATAAGACGTT--------TA---------GAGGCAAAAATAGGGCTAACAGAGCTAGACGTA-GGACGATTAGAAGAGCTTCAAAAACTCTTTATTACTAACCATACTGCCCTTTTAAAGATCGGCGTTGTCGATCATGAGTATTT-AATACCAAGCAGTATGATATCATT---------ATGATGGTGTTGGCTCAGATAAAATT---------A-----AGGGTTGAAA-------
droEle1 scf7180000488817:26-262 + AA----------A----------AAATGTTGTCCGAAACCATTATAAAGCTGCTTGAAGCA--CAGGCAAGCTTAACTAAAGAAATTAGAGTAA--------TT---------GAGGCAGGTCA---ATTAACAAGCGAAAGTATT-TCAAAATTAGATAGCCTCAAAGCTAGATTTGTTGCGAGTCATGGATCCTTATTAAAATGTGGAGTAGTCGATCATGACTATTTCAACAAAAAATGGTTTGAAGAGATTTGTTAA---------GTTATT---------------------GAA-----ACCCTAAAAA-------
droRho1 scf7180000777846:27304-27538 - AA----------A----------AATAGTTGTCCGAAACCATTATAAAGCTCCTTGAAGCA--CAGGCAAGCTTAACAAGAGAAATCAGAGTAA--------TT---------GAAGCAGGTCA---ATTAACAAGTGAAAGCATT-TCAAAATTAGATAGCCTCAAAGCTAGATTTGTTGCAAATCACGCATCATTATTAAAATGTGGAGTAGTCAATCATGATTATTTTAACAAAAAAGTGTTTGAGGAGATTTGTAGG---------GTTGTT---------------------GAA-----AGCC--TAAA-------
droBia1 scf7180000299442:40294-40549 - CA----------A----------AAATGTTATTCAAAAAGACCATTGAGCTCTTGCAGAAG--CAGTCTGAGCTGACTAAACAAATTAGAGTTT--------TA---------GAGGCAAAAGTGC-ACTTATCGCTACCAGAGTTTTAAAAACCTTTGGATCTACAAAAGGTTTTTATTGGTAATCATAGTAATTTACTAAAGATAGGTCCAGTTGACCATGAGTACTTTACATTAAAACATTACGATGCGATG---------ATGATGGTGCTAAAAAACATCAGTTTT----TTGAAAAAGT------TTGA-------
droTak1 scf7180000410362:544-776 + AA----------A----------AAATGTTGTCCGAAACCATTATAAAGCTGCTTGAAGCA--CAGGC----TTAACTAAAGAAATTAGAGTAA--------TT---------GAAGCAGGTCA---ATTAACAAGCGAAAGTATT-TCAAAATTAGATAGCCTCAAAGCTAGATTTGTTGCGAGTCTTGGATCCTTATTAAAATGTGGAGTAGTCGATCATGACGATTTCAACAAAAAATGGATTGAAGAGATTTGTAAA---------GTTATA---------------------GAA-----ACCCTAAAAA-------
droEug1 scf7180000408818:7038-7278 - AA----------A----------AAATGTTGTCCGAAACCAATATAAAGCTCCTTGAAGCA--CAGGCAAGCTTAACAAAAGAAATTGGAGTAA--------TT---------GAAGCAGGTCA---ATTAACGAGTGAAAATATT-TCAAAAGTAGATAGCCTCAAAGCTTGTTTCATAGCAAATCATGCTTGGTTATTAAAATGTGGAGTAGTCGATCATGACTATTTTAACAAGAAATGGTTTGAGAAGATTTGTGGG---------G--TT----------------------GAA-----AGCCTAAAAAGTAAATT
dm3 chr3L:7911262-7911522 + CAA---------A----------AAATGATGTCAGAAAAGACTATTCAATTCCTTAAGAAG--CAGTCCGAAATTATTTTGGAAATTAGAAAGT--------TG---------GAAGTAAAACCAACATTAACAGATGTAGAAATT-CTAAAATTAAATGAGCTTCAAAAATGTTTCATTGCTAATCATAGCAATTTGTTAAAGATCGGCGTTGTCGATCATGAATATTTTAACGCGAAGCAGTATGATTTAATA---------ATGATGGTGTTAGAAAAAATTAAAAATAAAAATGAAAAAAT------TAAG-------
droSec2 scaffold_978:4153-4422 - CAAAAAATTTTCA----------AAATGATGTCAGAAAAGACTATTCAATTCCTTAAGAAG--CAGTCCGAAATTATTTTGGAAATTAGAAAGT--------TG---------GAAGTAAAACCAACAAATACAGATGTAGAAATT-CTAAATATAAATGAGCTTCAAAAATGTTTCATTGCTAATCATAGCAATTTGTTAAAGATCGGCGTTGTCGATCATGAATATTTTAACGCGAAGCAGTATGATTTAATA---------ATGATGGTGTTAGAAAAAATTAAAAATAAAAATGAAAAAAT------TAAG-------
droYak3 v2_chrUn_6995:117126-117364 - TC----------A----------TAATGATGTCGGAAAAAAGCATACAATTTTTAAAGAAG--CAGTCCGAAATTATTTTTGAAATTAGGAAGT--------TG---------GCAGCAAAACCAACATTGTCAGATTCCGATTTA-GTAAGCTTAGAGGAGCTTCAAAAATCCTTTATTGCTAATCATAGCAATTTGATAAAGATCAGCGTTGTCGATCATGAATATTTTAATTCAAAGCAGTATGACCTAATA---------ATGTTGCTCTTAGCACAAA---------------------------TTAAA-------
droEre2 scaffold_4784:24116019-24116226 - TC----------A----------TTATGATGTCAGAAAAAACGATAGAGTGTCTAAAAAAG--CAGTGCGAAATTATTTTGGAAATAAGAAAGT--------TG---------GAAATAAAACCAACTTTAAGTGAGGAAGAATTT-TTTAAATTAGAAGAACTGCAAAAATTATTCGTTGCTAATCATAGCAATTTACTAAAGATCGGCATTGTCGATCATGAATATTTTAACAACAAGCAGTATGA--------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CA----------A----------AAATGTTCCCCACAAAAACTGAAAAACTATTAGCGAAG--CAACACGAGTTGCATAAAAGATTAAAAAAGC--------TAGAAGAGTTAGATGCTAGTAA---GTTTACTAGCAAGATTATT-AACGAAGTAAATGAGATACAGAAGCTATGGATTAGTTACCATAGTCAAATGCTAGAGAGTGGTGTAACTCAACACTACTATTTCACAGATGGGAAGTATGAGGAAGGTTT---AGATATGGCAGCCAAATTA--------------------------CTAG-CCAAA-------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................TACAGAAGCTATGGATTAGTTACC.......................................................................................................................................24200.40804040
................................................................................................................................................................AGATACAGAAGCTATGGATTAGTT..........................................................................................................................................24200.35707000
.............................................................................................................................................................ATGAGATACAGAAGCTATGGATTAGT...........................................................................................................................................26200.30600060
...................................................................................................................................................................TACAGAAGCTATGGATTAGTTACCAT.....................................................................................................................................26200.25500050
..............................................................................................................................................................TGAGATACAGAAGCTATGGATTAGT...........................................................................................................................................25200.15300030
.............................................................................................................................................................ATGAGATACAGAAGCTATGGATTAG............................................................................................................................................25200.15301020
................................................................................................................................................................AGATACAGAAGCTATGGATTAGTTACCA......................................................................................................................................28200.15303000
...................................................................................................................................................................................................ATGCTAGAGAGTGGTGTAACTCA........................................................................................................23200.15301110
..........................................................................................................................................................TAAATGAGATACAGAAGCTATGGAT...............................................................................................................................................25200.15300030
...............................................................................................................................................................GAGATACAGAAGCTATGGATT..............................................................................................................................................21200.10202000
................................................................................................................................................................AGATACAGAAGCTATGGATTAGT...........................................................................................................................................23200.10202000
........................................................................................................................................................................................................................................CAGATGGGAAGTATGAGGAAG.....................................................................21200.10200101
...............................................................................................................................................................GAGATACAGAAGCTATGGATTAGTT..........................................................................................................................................25200.10202000
...................................................................................................................................................................................................................TAACTCAACACTACTATTTCACAGA......................................................................................25200.10202000
..........................................................................................................................................................TAAATGAGATACAGAAGCTAT...................................................................................................................................................21200.10200020
.............................................AAAACTATTAGCGAAG--CAACACGA...........................................................................................................................................................................................................................................................24200.10202000
.........................................................................................................................................................................................................................AACACTACTATTTCACAGATGGG..................................................................................23200.10202000
................................................................................................................................................................AGATACAGAAGCTATGGATTAG............................................................................................................................................22200.10202000
...................................................................................................................................................................................................................................................TATGAGGAAGGTTT---AGATATGGCAGC..................................................26200.10200011
...............................................................................................................................................................................................TCAAATGCTAGAGAGTGGTGTAACT..........................................................................................................25200.05100010
..................................................................................................................................................................ATACAGAAGCTATGGATTAGT...........................................................................................................................................21200.05100001
......................................................................................................................................................................................................................................CACAGATGGGAAGTATGAGGAAGGT...................................................................25200.05100010
.................................................................................................................................................................GATACAGAAGCTATGGATTAGTTA.........................................................................................................................................24200.05101000
...................................................................................................................................................................................................................................................TATGAGGAAGGTTT---AGATATGGCAG...................................................25200.05100010
.......................................................................................................................................................................................................................................ACAGATGGGAAGTATGAGGAAG.....................................................................22200.05101000
......................................................AGCGAAG--CAACACGAGTTGCATAAAAG...............................................................................................................................................................................................................................................27200.05100010
.....................................................................................TAAAAAAGC--------TAGAAGAGTTAGATGC............................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................TACAGAAGCTATGGATTAGTTACCATA....................................................................................................................................27200.05100010
....................................................................................................................................................................................................TGCTAGAGAGTGGTGTAACTCA........................................................................................................22200.05101000
.................................................CTATTAGCGAAG--CAACACGAGT.........................................................................................................................................................................................................................................................22200.05100010
.....................................AAAACTGAAAAACTATTAGCGAAG--CA.................................................................................................................................................................................................................................................................26200.05101000
............................................................................................................................................................................................................................................................GGTTT---AGATATGGCAGCCAAATTA--------------------------CT...............26200.05101000
...................................................................................................................................................................................................................................TTTCACAGATGGGAAGTATG...........................................................................20200.05100010
.....................................................................................................................................................................................................................ACTCAACACTACTATTTCACAGA......................................................................................23200.05101000
....................................................TTAGCGAAG--CAACACGAGTTG.......................................................................................................................................................................................................................................................21200.05100001
..................................................................................................................................................................................................................................................GTATGAGGAAGGTTT---AGATATGG......................................................23200.05101000
..................................................TATTAGCGAAG--CAACACGAGTTGC......................................................................................................................................................................................................................................................24200.05101000
.........................................................................................................................................................................................................................AACACTACTATTTCACAGATGGGA.................................................................................24200.05101000
...................................................................................................................................................AACGAAGTAAATGAGATACAGAAGC......................................................................................................................................................25200.05100001
........................................................................................................................................................................................................................................................GGAAGGTTT---AGATATGGCAGCCA................................................23200.05101000
................................................................................................................................................................................................................................................................T---AGATATGGCAGCCAAATTA--------------------------CTAG-C...........25200.05100010
............................................................................................................................................................................................TAGTCAAATGCTAGAGAGTGGTGT..............................................................................................................24200.05100010
...........................................................................................AGC--------TAGAAGAGTTAGATA.............................................................................................................................................................................................................18200.05100010
..........................................................................................................................................................TAAATGAGATACAGAAGCTATGGA................................................................................................................................................24200.05101000
....................................................................................................................................................................................................................................................................AGATATGGCAGCCAAATTA--------------------------CTAG-............23200.05101000
...................................................................................................................................................................................................................TAACTCAACACTACTATTTCACAGAT.....................................................................................26200.05101000
........................................................................................................................................................................................................................................................GGAAGGTTT---AGATATGGCAGCCAAAA.............................................26200.05101000
...............................................................................................................................................................................................TCAAATGCTAGAGAGTGGTGTA.............................................................................................................22200.05100010
...................................................................................................................................................................TACAGAAGCTATGGATTAGTTACCA......................................................................................................................................25200.05100100
.............................................AAAACTATTAGCGAAG--CAACACGAGT.........................................................................................................................................................................................................................................................26200.05100010
.........................................................................................................................................................................................................................AACACTACTATTTCACAGATGGGAAGTA.............................................................................28200.05101000
.......................................................................................................AGAAGAGTTAGATGCTAGTAA---G..................................................................................................................................................................................................22200.05101000
..........................................................................................................................AA---GTTTACTAGCAAGATTATT-AACGAA.........................................................................................................................................................................27200.05101000
................................................................................................................................................................AGATACAGAAGCTATGGATTAGTTA.........................................................................................................................................25200.05101000
..............................................................................................................................................................................................................................TACTATTTCACAGATGGGAAGTAT............................................................................24200.05100010
..............................................................................................................................................................TGAGATACAGAAGCTATGGATTAG............................................................................................................................................24200.05100010
....................................................TTAGCGAAG--CAACACGAGTTGCA.....................................................................................................................................................................................................................................................23200.05100010
.............................................AAAACTATTAGCGAAG--CAACACG............................................................................................................................................................................................................................................................23200.05101000
...................................................................................................................................................................................................ATGCTAGAGAGTGGTGTAACTCAACACTA..................................................................................................29200.05100100
......................................................................................................................................................................................................................................CACAGATGGGAAGTATGAGGAAG.....................................................................23200.05100010
........................................................................................................................................................................AAGCTATGGATTAGTTACCATAG...................................................................................................................................23200.05100010
.........................................................................................................................................................GTAAATGAGATACAGAAGCTATGGAT...............................................................................................................................................26200.05100010
............................................................................................................................................................AATGAGATACAGAAGCTATGGAT...............................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................................................TGAGGAAGGTTT---AGATATGGCAGC..................................................24200.05100010
......................................................................................................................................................................................................................CTCAACACTACTATTTCACAGATG....................................................................................24200.05101000
...................................................................................................................................................................................................ATGCTAGAGAGTGGTGTAACTCAA.......................................................................................................24200.05101000
................................................................................................................................................................................................................GTGTAACTCAACACTACTATTTC...........................................................................................23200.05101000
.............................................................................................................................................................................................................................................................GTTT---AGATATGGCAGCCAAATTA--------------------------C................24200.05101000
.....................................AAAACTGAAAAACTATTAGCGAAG--C..................................................................................................................................................................................................................................................................25200.05101000
..........................................................................................................................................................................................................................................................AAGGTTT---AGATATGGCAG...................................................18200.05101000
...........................................................................................................................................................................................................................................ATGGGAAGTATGAGGAAGGTTT---AGA...........................................................25200.05100010
droVir3
CA----------G----------AAGTGAGACCCATAA---------AGCCACGCTAAAAAATTAGGCAGGTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATG---------------------TAA-----AATTAAAAAA-------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AA----------A----------AAATGCTCTCAGAAAAAGTTATAAAGCTTTTGAAAATG--CAATCGGACTTAGTGTCCAGATTGAAAAAAT--------TTGACTCATCTGAAGAAATTAG---GCCACCGAGCGAAATTTTA-GGAGAGTTAGAAAAAATAAAAGAAGAGTTAGAAAATAATCATACTTAATTGTTAAAAGTAGGGGTAATAGACCATGCATACTTTAACAATAAGGAATTTGATAAAGCA---------ATGAAAAGCATAAAA--------------------------GATT-TGAAA-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAGC.........................................................................................................................................................................................25201.653311000220
...........................................................................................................TCATCTGAAGAAATTAG---GCCACC.............................................................................................................................................................................................23201.30269000170
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGA...........................................................................................................................................................................................23201.05211400070
.............................................................................................................ATCTGAAGAAATTAG---GCCACC.............................................................................................................................................................................................21200.90182000160
...........................................................................................................TCATCTGAAGAAATTAG---GCCACCGA...........................................................................................................................................................................................25200.85171200050
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAG..........................................................................................................................................................................................24200.75151200012
.....................................................................................................................................................................................ATAATCATACTTAATTGTTAA........................................................................................................................2120.501100000
...........................................................................................................TCATCTGAAGAAATTAG---GCCACCGAGC.........................................................................................................................................................................................27200.5010610030
.........................................................................................................................................................................................................................ACCATGCATACTTTAACAATAAGG.................................................................................24200.408800000
..........................................................................................................CTCATCTGAAGAAATTAG---GCCACC.............................................................................................................................................................................................24200.357300040
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAGCG........................................................................................................................................................................................26200.357600001
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAGCGA.......................................................................................................................................................................................27200.306500010
...........................................................................................................TCATCTGAAGAAATTAG---GCCACCG............................................................................................................................................................................................24200.306600000
................................................................................................................................................................................................................................................GAATTTGATAAAGCA---------ATGAAAAGC.................................................24120.253210000
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAGCGAA......................................................................................................................................................................................28200.255400010
...........................................................................................................TCATCTGAAGAAATTAG---GCCAC..............................................................................................................................................................................................22200.204200020
.........................................................................................................................................................................................................................ACCATGCATACTTTAACAATAAG..................................................................................23200.204300010
.............................................................................................................ATCTGAAGAAATTAG---GCCACCG............................................................................................................................................................................................22200.204400000
................................................GCTTTTGAAAATG--CAATCGGACTTAG......................................................................................................................................................................................................................................................26100.202200000
.....................................................................................................................................................AGAGTTAGAAAAAATAAAAGAAGAGT...................................................................................................................................................2660.171100000
.......................................................................................................................................................AGTTAGAAAAAATAAAAGAAGAGT...................................................................................................................................................2460.171100000
............................................................................................................CATCTGAAGAAATTAG---GCCACCGA...........................................................................................................................................................................................24200.153200010
.........................................................................................................................................................................................................................ACCATGCATACTTTAACAATAAGGA................................................................................25200.153200010
..............................................................................................................TCTGAAGAAATTAG---GCCACCGAGCG........................................................................................................................................................................................25200.153300000
...........................................................................................................TCATCTGAAGAAATTAG---GCCACCGAG..........................................................................................................................................................................................26200.153300000
............................................TAAAGCTTTTGAAAATG--CAATCGGAC..........................................................................................................................................................................................................................................................2680.131000010
................................................GCTTTTGAAAATG--CAATCGGACTTAGTG....................................................................................................................................................................................................................................................2880.131100000
.................................................................................................................GAAGAAATTAG---GCCACCGAGC.........................................................................................................................................................................................21200.102100010
.........................................................AATG--CAATCGGACTTAGTGTC..................................................................................................................................................................................................................................................21200.102010100
.........................................................................................................................................................................................................................ACCATGCATACTTTAACAATAAGGAATT.............................................................................28200.102200000
.........................................................................................................................................................................................................................ACCATGCATACTTTAACAATAAGGAAT..............................................................................27200.102200000
................................................GCTTTTGAAAATG--CAATCGGACTTAGTC....................................................................................................................................................................................................................................................28100.101100000
..............................................................................................................TCTGAAGAAATTAG---GCCACCGAGCGA.......................................................................................................................................................................................26200.102100010
.........................................................................................................ACTCATCTGAAGAAATTAG---GCC................................................................................................................................................................................................22200.102000020
..........................................................................................................CTCATCTGAAGAAATTAG---GCCACCGA...........................................................................................................................................................................................26200.102100010
..............................................AAGCTTTTGAAAATG--CAATCGGA...........................................................................................................................................................................................................................................................23120.081100000
...............................................AGCTTTTGAAAATG--CAATCGGACT.........................................................................................................................................................................................................................................................24120.081100000
.....................................................................................................................................................................................................................................................TGATAAAGCA---------ATGAAAAGCATAAAT--------------------------.................25130.081100000
.....................................................................................................................................................................................................................................................TGATAAAGCA---------ATGAAAAGCATAAAA--------------------------GA...............27130.081100000
..................................................TTTTGAAAATG--CAATCGGACTT........................................................................................................................................................................................................................................................22140.071100000
................................................GCTTTTGAAAATG--CAATCGGACTT........................................................................................................................................................................................................................................................24140.071000001
................................................GCTTTTGAAAATG--CAATCGGACT.........................................................................................................................................................................................................................................................23140.071000010
.............................................................................................................ATCTGAAGAAATTAG---GCCAC..............................................................................................................................................................................................20200.051000010
....................................................................................................................GAAATTAG---GCCACCGAGCGAAAT....................................................................................................................................................................................23200.051000010
..................................................................................................................................ACCGAGCGAAATTTTA-GGAGAGT........................................................................................................................................................................23200.051000010
.....................................................................................................................................................AGAGTTAGAAAAAATAAAAGA........................................................................................................................................................21200.051010000
...........................................................................................................TCATCTGAAGAAATTAG---GCCACCC............................................................................................................................................................................................24200.051100000
.................................................................................................................GAAGAAATTAG---GCCACCGAGCGAAA.....................................................................................................................................................................................25200.051000010
..........................................................................................................CTCATCTGAAGAAATTAG---GCCACCG............................................................................................................................................................................................25200.051100000
...........................................................................................................TCATCTGAAGAAATTAG---GCCA...............................................................................................................................................................................................21200.051100000
......................................................................................................................................AGCGAAATTTTA-GGAGAG.........................................................................................................................................................................18200.051000010
..............................................................................................................TCTGAAGAAATTAG---GCCACCGAGCGAA......................................................................................................................................................................................27200.051100000
..............................................................................................................TCTGAAGAAATTAG---GCCACCGAG..........................................................................................................................................................................................23200.051100000
...........................................................................................................TCATCTGAAGAAATTAG---GC.................................................................................................................................................................................................19200.051100000
..................................................................................................................AAGAAATTAG---GCCACCGAGCGA.......................................................................................................................................................................................22200.051100000
...........................................................TG--CAATCGGACTTAGTGTCCAGATT............................................................................................................................................................................................................................................25200.051100000
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAGCGAAA.....................................................................................................................................................................................29200.051000010
....................................................TTGAAAATG--CAATCGGACTTAG......................................................................................................................................................................................................................................................22200.051100000
.......................................................................................................................................................................................................................AGACCATGCATACTTTAACAATAAGG.................................................................................26200.051100000
...................................................................................................................................................................................................................TAATAGACCATGCATACTTTAACA.......................................................................................24200.051000010
.............................................................................................................ATCTGAAGAAATTAG---GCCA...............................................................................................................................................................................................19200.051100000
...............................................................................................................CTGAAGAAATTAG---GCCACCGAGCG........................................................................................................................................................................................24200.051100000
..........................................................................................................................................................................................................................CCATGCATACTTTAACAATA....................................................................................20200.051100000
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAT..........................................................................................................................................................................................24200.051100000
.......................................................................................................................................................................................................................AGACCATGCATACTTTAACAATAAGGA................................................................................27200.051000010
.....................................................................................................................................................AGAGTTAGAAAAAATAAAAGAAGA.....................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................AGGGGTAATAGACCATGCATACTTTA..........................................................................................26200.051100000
.............................................................................................................................................TTTTA-GGAGAGTTAGAAAAAATAAAA..........................................................................................................................................................26200.051100000
......................................................................................................................................................................................................................TAGACCATGCATACTTTAACAAT.....................................................................................23200.051100000
..............................................................................................................TCTGAAGAAATTAG---GCCACCGAGC.........................................................................................................................................................................................24200.051100000
.........................................................................................................ACTCATCTGAAGAAATTAG---GCCACC.............................................................................................................................................................................................25200.051000010
............................................................................................................CATCTGAAGAAATTAG---GCCACCGAGC.........................................................................................................................................................................................26200.051000010
............................................................................................................CATCTGAAGAAATTAG---GCCACCGAG..........................................................................................................................................................................................25200.051000010
....................................................TTGAAAATG--CAATCGGACTTAGTGT...................................................................................................................................................................................................................................................25200.051010000
............................................................................................................................................................................................................................ATGCATACTTTAACAATA....................................................................................18200.051000010
........................................................AAATG--CAATCGGACTTAGTGTCCAGAT.............................................................................................................................................................................................................................................27200.051000010
.................................................................................................................GAAGAAATTAG---GCCACCGAGCGAT......................................................................................................................................................................................24200.051100000
..................................................................................................................................ACCGAGCGAAATTTTA-GGAGAGTTAGAAA..................................................................................................................................................................29200.051000010
...............................................................................................................................GCCACCGAGCGAAATTTTA-GGAGAGTTA......................................................................................................................................................................28200.051100000
........................................................................................................................................................................................................................GACCATGCATACTTTAACAATAAG..................................................................................24200.051100000
.......................................................................................................................................................................................................................AGACCATGCATACTTTAACAATA....................................................................................23200.051000010
.........................................................................................................ACTCATCTGAAGAAATTAG---GCCACCGA...........................................................................................................................................................................................27200.051100000
....................................................................................................................................................GAGAGTTAGAAAAAATAAAAGAAG......................................................................................................................................................24200.051100000
.......................................................................................................................................................................................................................AGACCATGCATACTTTAACAATAAGGAAT..............................................................................29200.051100000
......................................................................................................................................................................................................TTAAAAGTAGGGGTAATAGACC......................................................................................................22200.051100000
.....................................................................................................................................................................................................................ATAGACCATGCATACTTTAAC........................................................................................21200.051000010
.........................................................................................................................................................................................................................ACCATGCATACTTTAACAATA....................................................................................21200.051000010
.................................................................................................................GAAGAAATTAG---GCCACCGAGCG........................................................................................................................................................................................22200.051100000
..............................................................................................................TCTGAAGAAATTAG---GCCACCGA...........................................................................................................................................................................................22200.051000010
.........................................................................................................ACTCATCTGAAGAAATTAG---GCCACCG............................................................................................................................................................................................26200.051100000
..............................................................................................................TCTGAAGAAATTAG---GCCACCGAGCGAAA.....................................................................................................................................................................................28200.051100000
......................................................................................................................AATTAG---GCCACCGAGCGAA......................................................................................................................................................................................19200.051100000
.................................................................................................................GAAGAAATTAG---GCCACCGAG..........................................................................................................................................................................................20200.051000010
..........................................................................................................CTCATCTGAAGAAATTAG---GCC................................................................................................................................................................................................21200.051000010
..............................................................................................................................................................................................................AGGGGTAATAGACCATGCATACTT............................................................................................24200.051100000
....................................................TTGAAAATG--CAATCGGACTTAGT.....................................................................................................................................................................................................................................................23200.051100000
.............................................................................................................ATCTGAAGAAATTAG---GCCACCGAGT.........................................................................................................................................................................................25200.051100000
..............................................................................................................TCTGAAGAAATTAG---GCCAC..............................................................................................................................................................................................19200.051000010
droPer2
CT----------A----------AGATGTTGTCGGAACAAATAATTAAGCTATTAGAGGCT--CAAGCAGCGATAGCAAGGGAGATTAAAAAGA--------TT---------GAAGCTGGTCA---TTTGACCAGCGATGTAATC-CAAAGGTTAGGAGACCTTAAAAACAAAGTTACAGGCAATAATTCTGCACTGTTAACATATGGAGTAGTCGATCATGACTACTAGAG-AGACAGCAGTACGAAAAAATG---------ATTAAAAATATA---------------------GAG-----GACATACA------TAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................TACAGGCAATAATTCTGCACT.............................................................................................................................21200.102200000
.........................................................................................................................................GATGTAATC-CAAAGGTTAGGAGACC...............................................................................................................................................................25200.102000002
...............................TCGGAACAAATAATTAAGCTATT............................................................................................................................................................................................................................................................................23200.102020000
...............................................................CAAGCAGCGATAGCAAGGGAGATTA..........................................................................................................................................................................................................................................25200.102020000
..........................................................................................AAGA--------TT---------GAAGCTGGTCA---TTTGAC.............................................................................................................................................................................................23200.051010000
.......................................................................................AAAAAGA--------TT---------GAAGCTGGTCA---TT.................................................................................................................................................................................................22200.051001000
.......................................AATAATTAAGCTATTAGAGGC......................................................................................................................................................................................................................................................................21200.051000001
....................................................................AGCGATAGCAAGGGAGATTAAAA.......................................................................................................................................................................................................................................23200.051010000
......................................................................................TAAAAAGA--------TT---------GAAGCTGGTCA---TT.................................................................................................................................................................................................23200.051010000
....................................................................AGCGATAGCAAGGGAGATTAAAAAG.....................................................................................................................................................................................................................................25200.051000001
....................................................................................................................................................................................................TGTTAACATATGGAGTAGTCGATCATGA..................................................................................................28200.051010000
........................................................................................................................................................................................ATAATTCTGCACTGTTAACA......................................................................................................................20200.051010000
....................................................................................ATTAAAAAGA--------TT---------GAAGCTGGT........................................................................................................................................................................................................21200.051000001
............................................................................................GA--------TT---------GAAGCTGGTCA---TTTGT..............................................................................................................................................................................................20200.051010000
................................................................................................................................................................................................GCACTGTTAACATATGGAGTAGTCG.........................................................................................................25200.051010000
....................................................................AGCGATAGCAAGGGAGATT...........................................................................................................................................................................................................................................19200.051010000
.........................................................................TAGCAAGGGAGATTAAAAAGA--------TT---------GAAGC............................................................................................................................................................................................................28200.051010000
.................................................................................................................................................................................................................................................AGTACGAAAAAATG---------ATTAAAAATATA---------------------GA.......................28200.051010000
....................................................................AGCGATAGCAAGGGAGATTAAAAAGA--------T...........................................................................................................................................................................................................................27200.051010000
droAna3
CGGAACCATTTCCGCTCGTTTAGAAGTATAGCC---------CATAAAGCTATGCGAAACAA-TAGGTAGGATAAATGTAAAAAAACAAAAAAAAAATATATAAGAAAGAATA--------------------------------------GATGAGA------------------------------------------------------------------------------------------AGTAATTCGATAA----GTAAATTTAGT---------------------GAC-----GAAATAGG------TGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................TAAAAAAACAAAAAAAAAA.................................................................................................................................................................................................................................19200.051010000
droKik1
TATACAAA----A----------AAATGATGTCAGACAAAACTTTAGAGTTGCTAAAGGCG--CAGTCCGGAATCATTTTGGAAATGAGGCAGG--------TA---------GAAGCTAAAGTAGGGTTAACCAAACCAGACATA-GTAAGGTTAGAAGAGCTTCAGAAACTCTTCATAACAAATCATACGTTACTATTGAA-------------GATCATGAGTACTTTAACTCGAAACAATATGACGTAATA---------ATAATGGTCCTGGCACAAATCAAATT---------A-----AGAT-TTGAA-------SizeHit CountTotal NormTotal
No Reads
droFic1
TA----------A----------TAATGATTTCGGAAAAAACTATAGATTTGCTAAAGAAG--CAGTCCGGGATTATTTTGGAAATAAGACGTT--------TA---------GAGGCAAAAATAGGGCTAACAGAGCTAGACGTA-GGACGATTAGAAGAGCTTCAAAAACTCTTTATTACTAACCATACTGCCCTTTTAAAGATCGGCGTTGTCGATCATGAGTATTT-AATACCAAGCAGTATGATATCATT---------ATGATGGTGTTGGCTCAGATAAAATT---------A-----AGGGTTGAAA-------SizeHit CountTotal NormTotal
No Reads
droEle1
AA----------A----------AAATGTTGTCCGAAACCATTATAAAGCTGCTTGAAGCA--CAGGCAAGCTTAACTAAAGAAATTAGAGTAA--------TT---------GAGGCAGGTCA---ATTAACAAGCGAAAGTATT-TCAAAATTAGATAGCCTCAAAGCTAGATTTGTTGCGAGTCATGGATCCTTATTAAAATGTGGAGTAGTCGATCATGACTATTTCAACAAAAAATGGTTTGAAGAGATTTGTTAA---------GTTATT---------------------GAA-----ACCCTAAAAA-------SizeHit CountTotal NormTotal
No Reads
droRho1
AA----------A----------AATAGTTGTCCGAAACCATTATAAAGCTCCTTGAAGCA--CAGGCAAGCTTAACAAGAGAAATCAGAGTAA--------TT---------GAAGCAGGTCA---ATTAACAAGTGAAAGCATT-TCAAAATTAGATAGCCTCAAAGCTAGATTTGTTGCAAATCACGCATCATTATTAAAATGTGGAGTAGTCAATCATGATTATTTTAACAAAAAAGTGTTTGAGGAGATTTGTAGG---------GTTGTT---------------------GAA-----AGCC--TAAA-------SizeHit CountTotal NormTotal
No Reads
droBia1
CA----------A----------AAATGTTATTCAAAAAGACCATTGAGCTCTTGCAGAAG--CAGTCTGAGCTGACTAAACAAATTAGAGTTT--------TA---------GAGGCAAAAGTGC-ACTTATCGCTACCAGAGTTTTAAAAACCTTTGGATCTACAAAAGGTTTTTATTGGTAATCATAGTAATTTACTAAAGATAGGTCCAGTTGACCATGAGTACTTTACATTAAAACATTACGATGCGATG---------ATGATGGTGCTAAAAAACATCAGTTTT----TTGAAAAAGT------TTGA-------SizeHit CountTotal NormTotal
No Reads
droTak1
AA----------A----------AAATGTTGTCCGAAACCATTATAAAGCTGCTTGAAGCA--CAGGC----TTAACTAAAGAAATTAGAGTAA--------TT---------GAAGCAGGTCA---ATTAACAAGCGAAAGTATT-TCAAAATTAGATAGCCTCAAAGCTAGATTTGTTGCGAGTCTTGGATCCTTATTAAAATGTGGAGTAGTCGATCATGACGATTTCAACAAAAAATGGATTGAAGAGATTTGTAAA---------GTTATA---------------------GAA-----ACCCTAAAAA-------SizeHit CountTotal NormTotal
No Reads
droEug1
AA----------A----------AAATGTTGTCCGAAACCAATATAAAGCTCCTTGAAGCA--CAGGCAAGCTTAACAAAAGAAATTGGAGTAA--------TT---------GAAGCAGGTCA---ATTAACGAGTGAAAATATT-TCAAAAGTAGATAGCCTCAAAGCTTGTTTCATAGCAAATCATGCTTGGTTATTAAAATGTGGAGTAGTCGATCATGACTATTTTAACAAGAAATGGTTTGAGAAGATTTGTGGG---------G--TT----------------------GAA-----AGCCTAAAAAGTAAATTSizeHit CountTotal NormTotal
No Reads
dm3
CAA---------A----------AAATGATGTCAGAAAAGACTATTCAATTCCTTAAGAAG--CAGTCCGAAATTATTTTGGAAATTAGAAAGT--------TG---------GAAGTAAAACCAACATTAACAGATGTAGAAATT-CTAAAATTAAATGAGCTTCAAAAATGTTTCATTGCTAATCATAGCAATTTGTTAAAGATCGGCGTTGTCGATCATGAATATTTTAACGCGAAGCAGTATGATTTAATA---------ATGATGGTGTTAGAAAAAATTAAAAATAAAAATGAAAAAAT------TAAG-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.............................................................................TTTGGAAATTAGAAAGT--------TG---------GAAG.............................................................................................................................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................GCTAATCATAGCAATTTGTTAAAGAT....................................................................................................................26200.2550000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TCCGAAATTATTTTGGAAATTAGAAAGT--------............................................................................................................................................................................................................................28200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AATGATGTCAGAAAAGACTAT.....................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000
.......................................GACTATTCAATTCCTTAAGAAG--CAGT...............................................................................................................................................................................................................................................................26200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000100000
.............................................................................TTTGGAAATTAGAAAGT--------TG---------G................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000
.................................................TTCCTTAAGAAG--CAGTCCGAAATT.......................................................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................AAATGAGCTTCAAAAATGTT...................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000010
......................................................TAAGAAG--CAGTCCGAAATTAT.....................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000200000
............................................................................................................................................................................................TAGCAATTTGTTAAAGATCGGCG...............................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000
......................................................TAAGAAG--CAGTCCGAAATTATTTTG.................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
....................................................................................................................................................................................................................TGTCGATCATGAATATTTTAACGC......................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................AAATTAAATGAGCTTCAAAAA.......................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CGATCATGAATATTTTAACGCGA....................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AATTCCTTAAGAAG--CAGTCCGAAATT.......................................................................................................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TAGAAATT-CTAAAATTAAATGAGCT..............................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGTCGATC......................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AGTCCGAAATTATTTTGGAAA.............................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GAAATTAGAAAGT--------TG---------GAAGT............................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000
...................................................CCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000030000000000000000000000
..........................................................................................................................................................................................CATAGCAATTTGTTAAAGATCGGC................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................AGCTTCAAAAATGTTTCATTGCTAA.........................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGTTGTCGATCATGAATA...............................................................................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AGATGTAGAAATT-CTAAAATT.......................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TAAGAAG--CAGTCCGAAATTATTTTGG................................................................................................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000
..........................................................................................................................................................................................................................................GCGAAGCAGTATGATTTAAT....................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000200000000
............................................................................................................................................................................GTTTCATTGCTAATCATAGCA.................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................ATTCCTTAAGAAG--CAGTCCG............................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001010
....................................................................................ATTAGAAAGT--------TG---------GAAGTAAAA........................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000001000100000000000000000000000
droSec2
CAAAAAATTTTCA----------AAATGATGTCAGAAAAGACTATTCAATTCCTTAAGAAG--CAGTCCGAAATTATTTTGGAAATTAGAAAGT--------TG---------GAAGTAAAACCAACAAATACAGATGTAGAAATT-CTAAATATAAATGAGCTTCAAAAATGTTTCATTGCTAATCATAGCAATTTGTTAAAGATCGGCGTTGTCGATCATGAATATTTTAACGCGAAGCAGTATGATTTAATA---------ATGATGGTGTTAGAAAAAATTAAAAATAAAAATGAAAAAAT------TAAG-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................AAAGATCGGCGTTGTCGAT.......................................................................................................192013.35267002643
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGTCGAT.......................................................................................................252012.30246002442
......................................................................................................................................................................................................TTAAAGATCGGCGTTGTCGAT.......................................................................................................21205.05101020810
....................................................................................................................................................................................................TGTTAAAGATCGGCGTTGTCGAT.......................................................................................................23203.657300730
................................................................................................................................................................................................AATTTGTTAAAGATCGGCGTTGTCGAT.......................................................................................................27203.456902661
.......................................................................................................................................................................................................TAAAGATCGGCGTTGTCGAT.......................................................................................................20203.156303582
...................................................................................................................................................................................................TTGTTAAAGATCGGCGTTGTCGAT.......................................................................................................24202.655300530
.................................................TTCCTTAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................23201.553100310
.................................................................................................................................................................................................ATTTGTTAAAGATCGGCGTTGTCGAT.......................................................................................................26201.352701260
.....................................................................................................................................................................................................GTTAAAGATCGGCGTTGTCGAT.......................................................................................................22201.352702250
...................................................CCTTAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................21200.901800180
......................................................................................................................................................................................................................................TAACGCGAAGCAGTATGATTTA......................................................................22200.751505100
............A----------AAATGATGTCAGAAAAGACT.......................................................................................................................................................................................................................................................................................21200.70141391
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAA.....................................................................18200.701400140
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGTC..........................................................................................................22200.601200120
..................................................TCCTTAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................22200.601200120
......................................................................................TAGAAAGT--------TG---------GAAGTAAAACCAA....................................................................................................................................................................................................23200.551100110
.................................................TTCCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................22200.551100110
......................................................................................................................................................................................................................................TAACGCGAAGCAGTATGATTT.......................................................................21200.4590180
..............................................CAATTCCTTAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................26200.4590090
..........................................................................................................................................................TAAATGAGCTTCAAAAATGTT...................................................................................................................................................21200.4080161
.......................................................................................................................................................................................................................................AACGCGAAGCAGTATGATTTA......................................................................21200.4080251
........................AATGATGTCAGAAAAGACT.......................................................................................................................................................................................................................................................................................19200.4080080
....................................................................................................................................................................................................................................TTTAACGCGAAGCAGTATGAT.........................................................................21200.4081070
......................................................................................TAGAAAGT--------TG---------GAAGTAAAAC.......................................................................................................................................................................................................20200.4080080
..................................................TCCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................21200.3570070
............................................................................TTTTGGAAATTAGAAAGT--------TG---------G................................................................................................................................................................................................................21200.3061500
..............................................................................................................................................................TGAGCTTCAAAAATGTTTCATTGCT...........................................................................................................................................25200.3060060
......................................................TAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................18200.3060060
...........................................ATTCAATTCCTTAAGAAG--CA.................................................................................................................................................................................................................................................................20200.3060060
.......................................................................................AGAAAGT--------TG---------GAAGTAAAACCA.....................................................................................................................................................................................................21200.3060330
..........TCA----------AAATGATGTCAGAAAAGA.........................................................................................................................................................................................................................................................................................21200.3060150
...........................................ATTCAATTCCTTAAGAAG--CAGTCC.............................................................................................................................................................................................................................................................24200.2550050
..........................................................................................AAGT--------TG---------GAAGTAAAACCAA....................................................................................................................................................................................................19200.2550050
.........................ATGATGTCAGAAAAGACT.......................................................................................................................................................................................................................................................................................18200.2550050
..............................................CAATTCCTTAAGAAG--CAGTCC.............................................................................................................................................................................................................................................................21200.2552003
....................................................................................................................................................................................................TGTTAAAGATCGGCGTTGTCG.........................................................................................................21200.2550122
........................................................................................................................................................................................................AAAGATCGGCGTTGTCGATC......................................................................................................20200.2550050
........................................................................................GAAAGT--------TG---------GAAGTAAAACCAA....................................................................................................................................................................................................21200.2550140
..........................................................................TATTTTGGAAATTAGAAAGT--------TG---------GAAG.............................................................................................................................................................................................................26200.2550050
...................................................CCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................20200.2550050
..........................................TATTCAATTCCTTAAGAAG--CAGTC..............................................................................................................................................................................................................................................................24200.2040040
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAATA---------A.........................................................21200.2040040
.......................................................................................................................................................................................................TAAAGATCGGCGTTGTCGATC......................................................................................................21200.2040040
..............................................................................................................................................................................................................................GAATATTTTAACGCGAAGCAG...............................................................................21200.2041030
.........................................................................................................................................................................................................................................CGCGAAGCAGTATGATTT.......................................................................18200.2040040
........................AATGATGTCAGAAAAGAC........................................................................................................................................................................................................................................................................................18200.2040040
......ATTTTCA----------AAATGATGTCAGAA.............................................................................................................................................................................................................................................................................................21200.2040040
.....................................................................................................................................................................................................................................TTAACGCGAAGCAGTATGATTT.......................................................................22200.2040040
..............................................CAATTCCTTAAGAAG--CAGTCCGA...........................................................................................................................................................................................................................................................23200.2040040
.........................................................................TTATTTTGGAAATTAGAAAGT--------TG---------GAA..............................................................................................................................................................................................................26200.2040040
.................................................TTCCTTAAGAAG--CAGTCCGA...........................................................................................................................................................................................................................................................20200.2041210
..........................................................AAG--CAGTCCGAAATTATTTTG.................................................................................................................................................................................................................................................21200.2040040
................................................................................................................................................................................................AATTTGTTAAAGATCGGCGTT.............................................................................................................21200.2040400
..........................................................................................................................................................................................................................................GCGAAGCAGTATGATTTAA.....................................................................19200.2040040
.........................................................................TTATTTTGGAAATTAGAAAGT--------T...........................................................................................................................................................................................................................22200.2040040
........TTTCA----------AAATGATGTCAGAAAAGACT.......................................................................................................................................................................................................................................................................................25200.2040040
..............................................................................................................................................................TGAGCTTCAAAAATGTTTCA................................................................................................................................................20200.2040040
.........................................................................................................................................................................................................................................CGCGAAGCAGTATGATTTA......................................................................19200.2040040
................................................................................................................................................................................................AATTTGTTAAAGATCGGC................................................................................................................18200.2040040
.........................................................................................................................................................................................................................................CGCGAAGCAGTATGATTTAATA---------ATGA......................................................26200.2040040
.......................................................................................................................................................................................................TAAAGATCGGCGTTGTCGA........................................................................................................19200.2040040
...............................................................................................................................................................................................CAATTTGTTAAAGATCGG.................................................................................................................18200.2040040
...........................................................................................................................................................................................ATAGCAATTTGTTAAAGATCG..................................................................................................................21200.2040112
......................................................................................TAGAAAGT--------TG---------GAAGTAAAACCA.....................................................................................................................................................................................................22200.2040040
...........................................ATTCAATTCCTTAAGAAG--CAG................................................................................................................................................................................................................................................................21200.2040040
....................................................................................................................................................................................................................................TTTAACGCGAAGCAGTATGATT........................................................................22200.2040040
...................................................CCTTAAGAAG--CAGTCCGAA..........................................................................................................................................................................................................................................................19200.1530030
..........................................TATTCAATTCCTTAAGAAG--CAG................................................................................................................................................................................................................................................................22200.1530030
..................................................................................................................................................................................................................................ATTTTAACGCGAAGCAGTATGAT.........................................................................23200.1530030
....................................................CTTAAGAAG--CAGTCCGAAATT.......................................................................................................................................................................................................................................................21200.1530210
...........................................................................................................................................................AAATGAGCTTCAAAAATGTTT..................................................................................................................................................21200.1530030
.......................................................................................................................................................................................AATCATAGCAATTTGTTAAAGATCGGC................................................................................................................27200.1530030
..........................................................................................................................................................................................................................................GCGAAGCAGTATGATTTAAT....................................................................20200.1530030
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAAT....................................................................19200.1530030
..........................................................................................................................................................................................CATAGCAATTTGTTAAAGATCGG.................................................................................................................23200.1530030
.................................................................................................................................................................................................................CGTTGTCGATCATGAATA...............................................................................................18200.1530030
....................................................................................................................................................................................................TGTTAAAGATCGGCGTTGTCGATCATGAA.................................................................................................29200.1530030
.........................................................................................................................................................................................................................................................TTAATA---------ATGATGGTGTTAGA............................................20200.1533000
................................................ATTCCTTAAGAAG--CAGTCC.............................................................................................................................................................................................................................................................19200.1530030
..............................................CAATTCCTTAAGAAG--CAGTCCGAA..........................................................................................................................................................................................................................................................24200.1530030
...................................................................................AATTAGAAAGT--------TG---------GAAGTAAA.........................................................................................................................................................................................................21200.1530120
...............................................................................................................................................................................................CAATTTGTTAAAGATCGGCGTTGTC..........................................................................................................25200.1530030
.......................................GACTATTCAATTCCTTAAGAAG--CAGT...............................................................................................................................................................................................................................................................26200.1530030
...........................................................................................................................................................................................................................CATGAATATTTTAACGCGAAGC.................................................................................22200.1530030
...........................................ATTCAATTCCTTAAGAAG--CAGTCCGAA..........................................................................................................................................................................................................................................................27200.1530030
...........................................ATTCAATTCCTTAAGAAG--CAGT...............................................................................................................................................................................................................................................................22200.1530120
....................................................................................................................................................................TCAAAAATGTTTCATTGCT...........................................................................................................................................19200.1530030
......................................................................................................................................................................................................................................TAACGCGAAGCAGTATGA..........................................................................18200.1530030
....................................................................................................................................................................................................................................TTTAACGCGAAGCAGTATGATTTA......................................................................24200.1530030
...............................................AATTCCTTAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................25200.1530030
..............................................CAATTCCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................25200.1530030
.....................................................................................................................................................................................................GTTAAAGATCGGCGTTGTC..........................................................................................................19200.1531020
.............................................TCAATTCCTTAAGAAG--CAGT...............................................................................................................................................................................................................................................................20200.1531020
......................................................................................TAGAAAGT--------TG---------GAAGTAAAA........................................................................................................................................................................................................19200.1530030
.....................................................TTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................18200.1530030
........................................................................................................................................................................................................AAAGATCGGCGTTGTCGA........................................................................................................18200.1530030
.........................................................................................................................................................................................................................................CGCGAAGCAGTATGATTTAA.....................................................................20200.1530030
......................................................................................................................................................................................................................................TAACGCGAAGCAGTATGAT.........................................................................19200.1530030
..................................................................................................................................................................................................................................ATTTTAACGCGAAGCAGTATG...........................................................................21200.1530210
.................................................................................................................................................................................................ATTTGTTAAAGATCGGCGTTGTCGATC......................................................................................................27200.1530030
................................................................................................................................................................................................AATTTGTTAAAGATCGGCGTTGTC..........................................................................................................24200.1530120
.............................................................................................................................................................................................................................TGAATATTTTAACGCGAAGCA................................................................................21200.1530120
.....................................................................................TTAGAAAGT--------TG---------GAAGTAAAACC......................................................................................................................................................................................................22200.1020020
......................................................................................................................................................................................................TTAAAGATCGGCGTTGTCGAC.......................................................................................................21200.1020110
...........................................................................................................................................................................TGTTTCATTGCTAATCATAG...................................................................................................................................20200.1020020
....AAATTTTCA----------AAATGATGTCAGAAAAGACT.......................................................................................................................................................................................................................................................................................29200.1022000
............................................................................................................................................................................................TAGCAATTTGTTAAAGATCGG.................................................................................................................21200.1021010
...............................................................................................................................................................................................CAATTTGTTAAAGATCGGCGT..............................................................................................................21200.1020200
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGT...........................................................................................................21200.1020200
................................................................................................................................................................................................................................ATATTTTAACGCGAAGCAGTA.............................................................................21200.1020110
.........................................................................................AAAGT--------TG---------GAAGTAAAACCA.....................................................................................................................................................................................................19200.1020020
...................................................................................AATTAGAAAGT--------TG---------GAAGTAAAACCAA....................................................................................................................................................................................................26200.1020020
.........................................................................TTATTTTGGAAATTAGAAAGT--------TG---------GA...............................................................................................................................................................................................................25200.1020020
..........................................................AAG--CAGTCCGAAATTATTTTGGAAA.............................................................................................................................................................................................................................................25200.1020020
......................................................................................................................................................................................................TTAAAGATCGGCGTTGTC..........................................................................................................18200.1020020
.....................................................................................................................................................................................................................................TTAACGCGAAGCAGTATGATTTAAT....................................................................25200.1020020
................................................................................................................................................................................................AATTTGTTAAAGATCGGCGTTGTCGATC......................................................................................................28200.1020020
............................................TTCAATTCCTTAAGAAG--CAGT...............................................................................................................................................................................................................................................................21200.1021100
.....................................................................................TTAGAAAGT--------TG---------GAAGTAAAACCA.....................................................................................................................................................................................................23200.1020020
.............................................................................................................................................................................................AGCAATTTGTTAAAGATCGGC................................................................................................................21200.1020110
.................................................................................................................................................................................................................................TATTTTAACGCGAAGCAGTATG...........................................................................22200.1020020
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAATA---------AT........................................................22200.1020020
.............................................................................................................................................................................................................................TGAATATTTTAACGCGAAGC.................................................................................20200.1020011
.............................................................................................................................................................................................AGCAATTTGTTAAAGATCG..................................................................................................................19200.1020020
...........................................ATTCAATTCCTTAAGAAG--CAGTC..............................................................................................................................................................................................................................................................23200.1020020
....................................................................................................................................................................................................................................TTTAACGCGAAGCAGTATG...........................................................................19200.1020020
........................................................................................................................................................................................................................................ACGCGAAGCAGTATGATT........................................................................18200.1020020
..................................................................................AAATTAGAAAGT--------TG---------GAAG.............................................................................................................................................................................................................18200.1020020
.........................................................................TTATTTTGGAAATTAGAAAGT--------............................................................................................................................................................................................................................21200.1020020
.............................................................................................................................................................ATGAGCTTCAAAAATGTTTCATTGCT...........................................................................................................................................26200.1020020
.....................................................................................................................................................................................................................................................TGATTTAATA---------ATGATGGTGTT...............................................21200.1022000
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAATA---------ATGATGG...................................................27200.1020020
.............................................TCAATTCCTTAAGAAG--CAG................................................................................................................................................................................................................................................................19200.1020020
.................................................................................................................................................................................................ATTTGTTAAAGATCGGCGTTG............................................................................................................21200.1021010
.....................................................TTAAGAAG--CAGTCCGAAATTA......................................................................................................................................................................................................................................................21200.1020110
.............................................................................TTTGGAAATTAGAAAGT--------TG---------GA...............................................................................................................................................................................................................21200.1020020
......................................................TAAGAAG--CAGTCCGAAATTAT.....................................................................................................................................................................................................................................................21200.1020020
.......................................................................................AGAAAGT--------TG---------GAAGTAAAACC......................................................................................................................................................................................................20200.1020110
........................................................................................GAAAGT--------TG---------GAAGTAAAACCA.....................................................................................................................................................................................................20200.1020101
................................................................................................................................................................................................................................ATATTTTAACGCGAAGCAGTATGAT.........................................................................25200.1020020
CAAAAAATTTTCA----------AAATGAT....................................................................................................................................................................................................................................................................................................20200.1020011
...........................................ATTCAATTCCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................28200.1020020
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAATA---------ATGA......................................................24200.1020020
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGTCGATCAT....................................................................................................28200.1020020
.....................................................................................TTAGAAAGT--------TG---------GAAGTAAA.........................................................................................................................................................................................................19200.1020020
...........................................................................................................................................................................................................................CATGAATATTTTAACGCGAAG..................................................................................21200.1020200
........................................................................................................................................................................................................................................ACGCGAAGCAGTATGATTTA......................................................................20200.1020011
............................................................................................................................................................................................................................ATGAATATTTTAACGCGAAGC.................................................................................21200.1020020
.......................................................................................................................................................................................................................................AACGCGAAGCAGTATGATTT.......................................................................20200.1020110
.......................................................................................................................................................................................................TAAAGATCGGCGTTGTCG.........................................................................................................18200.1020020
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGTCG.........................................................................................................23200.1020020
......ATTTTCA----------AAATGATGTCAG...............................................................................................................................................................................................................................................................................................19200.1020020
..........................................................................................AAGT--------TG---------GAAGTAAAACCA.....................................................................................................................................................................................................18200.1020020
................................................................................................................................................................................................AATTTGTTAAAGATCGGCGT..............................................................................................................20200.1020020
........................AATGATGTCAGAAAAGACTAT.....................................................................................................................................................................................................................................................................................21200.1020020
........................................................................................................................................................................................................................................................TTTAATA---------ATGATGGTGTTAGA............................................21200.1022000
.....................................................................................................................................................................................................................................TTAACGCGAAGCAGTATGATT........................................................................21200.1020020
.............................................TCAATTCCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................26200.1020020
.AAAAAATTTTCA----------AAATGATGTCAGA..............................................................................................................................................................................................................................................................................................25200.1020020
....................................................................................................................................................................................................................................................ATGATTTAATA---------ATGATGGTGT................................................21200.1022000
.................................................................................................................................................................................................................................TATTTTAACGCGAAGCAGTAT............................................................................21200.1020011
.................................................................................................................................................................................................................CGTTGTCGATCATGAATATTTTAACG.......................................................................................26200.1020020
...............................................................................................................................................................................................CAATTTGTTAAAGATCGGCGTTGTCG.........................................................................................................26200.1020020
......................................................................................................................................................................................................TTAAAGATCGGCGTTGTCGA........................................................................................................20200.1021010
.............................................TCAATTCCTTAAGAAG--CAGTC..............................................................................................................................................................................................................................................................21200.1021010
...................................................................................................................................................................................................TTGTTAAAGATCGGCGTTGTCG.........................................................................................................22200.1020110
...........CA----------AAATGATGTCAGAAAAGAC........................................................................................................................................................................................................................................................................................21200.1020020
.......................................................................................................................................................................................................................................AACGCGAAGCAGTATGATT........................................................................19200.1020020
.................................................................................................................................................................................................ATTTGTTAAAGATCGGCGTTGTC..........................................................................................................23200.1020020
......................................................................................TAGAAAGT--------TG---------GAAGTAAAACCAAC...................................................................................................................................................................................................24200.1020020
....................................................................................................................................................................................................TGTTAAAGATCGGCGTTGTCGA........................................................................................................22200.1020020
...................................................CCTTAAGAAG--CAGTCCGAAATT.......................................................................................................................................................................................................................................................22200.1020110
......ATTTTCA----------AAATGATGTCAGA..............................................................................................................................................................................................................................................................................................20200.1021100
....................................................CTTAAGAAG--CAGTCCGAAAT........................................................................................................................................................................................................................................................20200.1020020
..............................................................................................................................................................................................................................GAATATTTTAACGCGAAG..................................................................................18200.1020020
..................................................TCCTTAAGAAG--CAGTCCGAA..........................................................................................................................................................................................................................................................20200.1020020
...............................................................................................................................................................................................CAATTTGTTAAAGATCGGCGTT.............................................................................................................22200.1020200
..................................................................................AAATTAGAAAGT--------TG---------GAAGT............................................................................................................................................................................................................19200.1020020
.......................................................AAGAAG--CAGTCCGAAATTATT....................................................................................................................................................................................................................................................21200.1021100
......................................................................................................................................................................................TAATCATAGCAATTTGTTAA........................................................................................................................20200.1020020
.......................................................................................................................................................................................................................................AACGCGAAGCAGTATGAT.........................................................................18200.1020020
................................................................................................................................................................................................................................................................................GTTAGAAAAAATTAAAAAT...............................19200.1020020
.......................................................................................AGAAAGT--------TG---------GAAGTAAAACCAA....................................................................................................................................................................................................22200.1020020
..................................................................................AAATTAGAAAGT--------TG---------GAAGTAAA.........................................................................................................................................................................................................22200.0510010
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAATA---------..........................................................20200.0510010
.............................................................................................................................................................................................................................................AAGCAGTATGATTTAATA---------A.........................................................19200.0510010
.AAAAAATTTTCA----------AAATGATGT..................................................................................................................................................................................................................................................................................................21200.0510010
..................................................................................................................................................................................................TTTGTTAAAGATCGGCGTTGTT..........................................................................................................22200.0510001
...........................................................................................................................................................................................................................................CGAAGCAGTATGATTTAATA---------ATGAT.....................................................25200.0510010
....................................................................................................................................................................................................................................TTTAACGCGAAGCAGTATGATTTAA.....................................................................25200.0510010
............................................TTCAATTCCTTAAGAAG--CAGTCCGAAA.........................................................................................................................................................................................................................................................27200.0510010
.......................................GACTATTCAATTCCTTAAGA.......................................................................................................................................................................................................................................................................20200.0510010
................................................................................................................................................................................................................................ATATTTTAACGCGAAGCAGTATGATTTA......................................................................28200.0510010
.................................................TTCCTTAAGAAG--CAGTCCGAAATTAT.....................................................................................................................................................................................................................................................26200.0510010
......................................................................................TAGAAAGT--------TG---------GAAGTAAAACC......................................................................................................................................................................................................21200.0510010
.....AATTTTCA----------AAATGATGTCAGA..............................................................................................................................................................................................................................................................................................21200.0510010
.........................................................................................................................................................................................TCATAGCAATTTGTTAAAGATCGG.................................................................................................................24200.0510010
.............................................................................................................................................................................................................................TGAATATTTTAACGCGAAG..................................................................................19200.0510010
............A----------AAATGATGTCAGAAAAGA.........................................................................................................................................................................................................................................................................................19200.0510010
................................................................................................................................................................................................................................................................................GTTAGAAAAAATTAAAAATA..............................20200.0510010
.............................................................................................................................................................................................AGCAATTTGTTAAAGATCGGCGTTGTC..........................................................................................................27200.0510010
.....................................................................GAAATTATTTTGGAAATTAGA........................................................................................................................................................................................................................................21200.0510010
........................................................................................................................................................................................................................................ACGCGAAGCAGTATGATTTAATA---------..........................................................23200.0510010
.........TTCA----------AAATGATGTCAGAAAAG..........................................................................................................................................................................................................................................................................................21200.0510100
.......................................................................................................................................................................................AATCATAGCAATTTGTTAAAGAT....................................................................................................................23200.0510010
.....................................................................................................................................................................................................................................................TGATTTAATA---------ATGATGGTGTTAGAA...........................................25200.0510010
................................................................................................................................................................................................................GCGTTGTCGATCATGAAT................................................................................................18200.0510010
......................................................................................................................................................................................................................................TAACGCGAAGCAGTATGATT........................................................................20200.0510010
.........................................................................................................................................................................................................................ATCATGAATATTTTAACGCGAAGCA................................................................................25200.0510010
...............................................................................................................................................................................................................GGCGTTGTCGATCATGAATATT.............................................................................................22200.0511000
................................................................................................................................................................................................AATTTGTTAAAGATCGGCGTTG............................................................................................................22200.0510100
...................................................................................AATTAGAAAGT--------TG---------GAAGTAA..........................................................................................................................................................................................................20200.0510010
........TTTCA----------AAATGATGTCAGAAAAG..........................................................................................................................................................................................................................................................................................22200.0510010
.......................................................AAGAAG--CAGTCCGAAATTATTTTGGAAA.............................................................................................................................................................................................................................................28200.0510100
........................................ACTATTCAATTCCTTAAGAAG--CAGTC..............................................................................................................................................................................................................................................................26200.0510010
..........................................................................................................................................................................................................................................GCGAAGCAGTATGATTTAATA---------ATG.......................................................24200.0510010
CAAAAAATTTTCA----------AAATGATGTCA................................................................................................................................................................................................................................................................................................24200.0510010
......................................................................................................................................................................................................................................TAACGCGAAGCAGTATGATTTAATA---------AT........................................................27200.0510010
........................................................................................................................................................................................................AAAGATCGGCGTTGTCGATCAT....................................................................................................22200.0510010
................................CAGAAAAGACTATTCAAT................................................................................................................................................................................................................................................................................18200.0510010
...........................................................AG--CAGTCCGAAATTATTT...................................................................................................................................................................................................................................................18200.0510010
..........................................................................................................................................................................................................................................GCGAAGCAGTATGATTTA......................................................................18200.0510010
...........................................................AG--CAGTCCGAAATTATTTTGGAAA.............................................................................................................................................................................................................................................24200.0510010
.................................................................................GAAATTAGAAAGT--------TG---------GAAGTAA..........................................................................................................................................................................................................22200.0510010
.....................................................................................TTAGAAAGT--------TG---------GAAGTAAAA........................................................................................................................................................................................................20200.0510100
...............................................................................................................................................................................................................................................GCAGTATGATTTAATA---------ATGATGGTGT................................................26200.0510010
....................................................................................................................................................................................................................................................ATGATTTAATA---------ATGATGGTGTTAG.............................................24200.0511000
.................................................................................................................................................................................................................................TATTTTAACGCGAAGCAGTA.............................................................................20200.0510010
...............................................................................................................................................................................................CAATTTGTTAAAGATCGGCGTTGT...........................................................................................................24200.0510010
....................................................................................................................................................................................................TGTTAAAGATCGGCGTTGTC..........................................................................................................20200.0510010
.......TTTTCA----------AAATGATGTCAGAAAAGAC........................................................................................................................................................................................................................................................................................25200.0510010
...................................................................................................................................................................................................................................TTTTAACGCGAAGCAGTATGAT.........................................................................22200.0510010
.......TTTTCA----------AAATGATGTCAGA..............................................................................................................................................................................................................................................................................................19200.0510010
......................................................................................................................................................................................TAATCATAGCAATTTGTTA.........................................................................................................................19200.0511000
....................................................................................ATTAGAAAGT--------TG---------GAAGTAA..........................................................................................................................................................................................................19200.0510010
..........................................TATTCAATTCCTTAAGAAG--...................................................................................................................................................................................................................................................................19200.0510010
.........................................CTATTCAATTCCTTAAGA.......................................................................................................................................................................................................................................................................18200.0510010
...............................................................................................................................................................GAGCTTCAAAAATGTTTCATT..............................................................................................................................................21200.0511000
.............................................................................................................................................................................................................................................................TA---------ATGATGGTGTTAGAAA..........................................18200.0510010
.............................................................................TTTGGAAATTAGAAAGT--------T...........................................................................................................................................................................................................................18200.0510010
.........................ATGATGTCAGAAAAGACTATT....................................................................................................................................................................................................................................................................................21200.0510010
........................................................................................................................................................................................................................................ACGCGAAGCAGTATGATTTAA.....................................................................21200.0510100
.................................................TTCCTTAAGAAG--CAGTCCGAAATTATT....................................................................................................................................................................................................................................................27200.0510010
...................................................CCTTAAGAAG--CAGTCCGAAATTA......................................................................................................................................................................................................................................................23200.0510010
............................................................................................................................................................................................TAGCAATTTGTTAAAGATCGGCGTTG............................................................................................................26200.0510010
..........................................................................................................................................................................................CATAGCAATTTGTTAAAGATCG..................................................................................................................22200.0510010
..........................................................................................................................................................................................................................................GCGAAGCAGTATGATTTAATA---------ATGA......................................................25200.0510010
............................................................................................................................................................AATGAGCTTCAAAAATGTTTCA................................................................................................................................................22200.0510010
...........................................................................................................................................................AAATGAGCTTCAAAAATGT....................................................................................................................................................19200.0510010
...................................................................................................................................................................................................................................TTTTAACGCGAAGCAGTATGA..........................................................................21200.0510010
......ATTTTCA----------AAATGATGTCAGAAAAGACT.......................................................................................................................................................................................................................................................................................27200.0510010
...........................................................................................................................................................AAATGAGCTTCAAAAATGTT...................................................................................................................................................20200.0510100
.............................................................................................................................................................................................................................................AAGCAGTATGATTTAATA---------ATGA......................................................22200.0510010
.....................................................................................................................................................................................CTAATCATAGCAATTTGTTAA........................................................................................................................21200.0510010
.........................................................................................................................................................................................................................ATCATGAATATTTTAACGCG.....................................................................................20200.0510010
.......................................................AAGAAG--CAGTCCGAAATTATTTTGGAA..............................................................................................................................................................................................................................................27200.0510010
droYak3
TC----------A----------TAATGATGTCGGAAAAAAGCATACAATTTTTAAAGAAG--CAGTCCGAAATTATTTTTGAAATTAGGAAGT--------TG---------GCAGCAAAACCAACATTGTCAGATTCCGATTTA-GTAAGCTTAGAGGAGCTTCAAAAATCCTTTATTGCTAATCATAGCAATTTGATAAAGATCAGCGTTGTCGATCATGAATATTTTAATTCAAAGCAGTATGACCTAATA---------ATGTTGCTCTTAGCACAAA---------------------------TTAAA-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................CATTGTCAGATTCCGA....................................................................................................................................................................................16100.20200000000002
...........................................................................................................................................................................................................................................CAAAGCAGTATGACCTAATA---------ATG.......................................................2360.17101000000000
......................................................................................................................AAAACCAACATTGTCAGATTCCG.....................................................................................................................................................................................2390.11101000000000
.........................................................................................................................ACCAACATTGTCAGATTCCGAT...................................................................................................................................................................................2290.11100010000000
...................................................................................................................................................................................................................TTGTCGATCATGAATATTTT...........................................................................................20190.05101000000000
droEre2
TC----------A----------TTATGATGTCAGAAAAAACGATAGAGTGTCTAAAAAAG--CAGTGCGAAATTATTTTGGAAATAAGAAAGT--------TG---------GAAATAAAACCAACTTTAAGTGAGGAAGAATTT-TTTAAATTAGAAGAACTGCAAAAATTATTCGTTGCTAATCATAGCAATTTACTAAAGATCGGCATTGTCGATCATGAATATTTTAACAACAAGCAGTATGA--------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................AAAAAG--CAGTGCGAAATTATTTTGGAAA.............................................................................................................................................................................................................................................2811.0011000000
...............................................................................................................................................................................................CAATTTACTAAAGATCGGCATTGTC..........................................................................................................2511.0011000000
..............................................................................................................................................................AGAACTGCAAAAATTATTCGTTGC............................................................................................................................................2420.5010100000

Generated: 05/18/2015 at 02:17 AM