ID:

dwi_1645

 Coordinate:

scf2_1100000004585:2264643-2264793 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

0.0 0.2 0.6

Flybase annnotation

CDS [Dwil\GK24443-cds]; exon [dwil_GLEANR_8561:1]; intron [Dwil\GK24443-in]

No Repeatable elements found

Sense Strand Reads

-----------------#################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGTGGTGAAAATCAATATGGCGTCGCCAGGGCGTCAGACGTGTCTACGTGTCAAGGCAGAAGGCCATTAGAGCTGCCAACTTGAAGAAAAAAATCGGCCTGAAGAAACTTAACTAAATTACAAACAAAAATAAGGAAGAACCGTGTCATTTGCTAAAATATTGCTGTTTTTCCTGTATTCAATTTTTCTTCGACCATTCAAGAGGGGCGGCGGTGGGAGTGATTTTGAACGAGTTGTCAGCCCCGCTTTG
****************************************************************************************************************************************************.......((((((....))))))...........................***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V118
embryo
 V117
male body		 V119
head
....................................................................................................................................................ATTTGCTAAAATATTGCTGTT.................................................................................. 21 0 1 3.00 3 1 2 0 0 0
.............................................................................................................................................................................................TTCGACCATTCAAGAGGGG........................................... 19 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................CGGTGGGAGTGATTTTGAACGAGTT............... 25 0 1 1.00 1 0 0 0 1 0
................................................GTGTTAAGGCAGAAGGCCATT...................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................CAAGAGGGGCGGCGGTGGGAGTGA............................ 24 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................AAGGAAGAACCGTGTCATT.................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
.........................GCCGGGGCGTCGGACGTGTCT............................................................................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................ATTCAATTTTTCTTCGACCAT..................................................... 21 0 1 1.00 1 0 0 1 0 0
..........AATCAATATGGCGTCGCCAGGGC.......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................................................................AACGAGTTGTCAGCCCCGCT... 20 0 1 1.00 1 1 0 0 0 0
..............AGTATGGCGTCGCCAGGGCGT........................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................GGAGTGATTTTGAACGAG................. 18 0 1 1.00 1 0 0 1 0 0
.........................................................................................................................................AGAACCGTGTCATTTGCTAA.............................................................................................. 20 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................................................................AACGAGTTGTCAGCCCCG..... 18 0 1 1.00 1 0 1 0 0 0
................................................................................CTTGAAGAAAAAAATCGGCCT...................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
......................................ACGTGTCTACGTGTCAAGG.................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1
.............................................................................................................................................................................................TTCGACCATTCAAGAGGGGCG......................................... 21 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................TTCGACCATTCAGGAGGGGC.......................................... 20 1 1 1.00 1 1 0 0 0 0
..............................................ACGTGTCAGGGCGGAAGGC.......................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 1 0
.TGTGGTGAAAGTCAGTATGGC..................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 1
......................................................................................................................................GGAAGAACCGTGTCATTTG.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
...............................................................GCCATTAGAGCTGCCAACTTG....................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................TCGGCCTGAAGAAACTTAACTAAATTAC................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................................ACGAGTTGTCAGCCCCGCT... 19 0 1 1.00 1 0 0 0 1 0
...................................CAGACGTGTCTACGTGTCAAG................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
...........ATCAATATGGCGTCGCCAGGGCG......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
............TCAATATGGCGTCGCCAGGGC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
...........ATCAATATGGCGTCGCCAGGGC.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
.............CAATATGGCGTCGCCAGGGCG......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..................................................................................TGAAGAAAAAAATCGGCC....................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................GGAAGAACCGTGTCATTTGCT................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.........................GCCAGGGCGTCAGACGTGTCTACGT......................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
.........AAATCAATATGGCGTCGCCAGGGCGTCA...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0
.TGTGGTGAAAATCAATATGGC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1
.........................GCCAGGGCGTCAGACGTGTCTACGTG........................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 1
............................................CTACGTGTCAAGGCAGAAGGC.......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
..............AATATGGCGTCGCCAGGGCG......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
............................................CTGCGTGTCAAGGCAGAAGGCT......................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
.....GTGAAAATCAATATGGCGTCGC................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.............................................TACGTGTCAAGGCAGAAGG........................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1
..................................................................................................................................................................................TTCAATTTTTCTTCGACCATT.................................................... 21 0 1 1.00 1 0 0 0 0 1
.....................................................................................................GAAGAAACTAAACTAAATT................................................................................................................................... 19 1 2 0.50 1 1 0 0 0 0
...............................................................................ACTTGAAGAAGGGAATCGGCC....................................................................................................................................................... 21 3 3 0.33 1 0 1 0 0 0
......................................................................................GAACAAGATCGGCCTGAAGG................................................................................................................................................. 20 3 4 0.25 1 0 0 0 1 0
.....................................................................................................................................................................................................TTCACGCGGGGCAGCGGTGG.................................. 20 3 5 0.20 1 1 0 0 0 0
........................................................................................AAAAAGTCGGCCTGAAGG................................................................................................................................................. 18 2 12 0.08 1 0 1 0 0 0
..............................................................................................................................AAAAAGAAAGAAGATCCGTGT........................................................................................................ 21 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

AACACCACTTTTAGTTATACCGCAGCGGTCCCGCAGTCTGCACAGATGCACAGTTCCGTCTTCCGGTAATCTCGACGGTTGAACTTCTTTTTTTAGCCGGACTTCTTTGAATTGATTTAATGTTTGTTTTTATTCCTTCTTGGCACAGTAAACGATTTTATAACGACAAAAAGGACATAAGTTAAAAAGAAGCTGGTAAGTTCTCCCCGCCGCCACCCTCACTAAAACTTGCTCAACAGTCGGGGCGAAAC
*****************************************************.......((((((....))))))...........................**************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V119
head
................................................................GGTAATCTCGACGGTTGAACT...................................................................................................................................................................... 21 0 1 2.00 2 0 2 0
.......................AGCGGTCCCGCAGTCTGCACA............................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0
..............................................................................................................................................................TATAACGACAAAAAGGACATAA....................................................................... 22 0 1 1.00 1 0 0 1
.........................................................GTCTTCCGGTAATCTCGACGG............................................................................................................................................................................. 21 0 1 1.00 1 1 0 0
......................................TGCACAGGTGCACAGTTCCGT................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1
......................CAGCGGTCCCGCAGTCTGC.................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0
................................................CACAGTTCCGTCTTCCGGTAA...................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
...............................................GCACAGTTCCGTCTTCCGGTA....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
........................................................................CGACGGTTGGACTTCTTTTTT.............................................................................................................................................................. 21 1 1 1.00 1 0 0 1
.......................AGCGGTCCCGCAGTCTGCGCA............................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0
......................................................................CTCGACGGTTGAACTTCTTT................................................................................................................................................................. 20 0 1 1.00 1 0 1 0
...............................................................CGGTAATCTCGACGGTTGAA........................................................................................................................................................................ 20 0 1 1.00 1 0 1 0
..............................................................CCGGTAATCTCGACGGTTG.......................................................................................................................................................................... 19 0 1 1.00 1 0 1 0
.............................................................................................TAGCCGGACTTCTTTGAATTG......................................................................................................................................... 21 0 1 1.00 1 0 0 1
....................................................................................................................................................................................GTTAAAAAGAAGCTGGTAAGT.................................................. 21 0 1 1.00 1 1 0 0
........................................................................................................................................................................................AAAAGAAGCTGGTAAGTTCTC.............................................. 21 0 1 1.00 1 1 0 0
........................GCGGTCCCGCAGTCTGCACAG.............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0
................................GCAGTCTGCGCAGGTGCACAGT..................................................................................................................................................................................................... 22 2 1 1.00 1 0 1 0
.............................CCCGCAGTCTGCACAGATGCA......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0
.............................................................................................TAGCCGCACGACTTTGAATTG......................................................................................................................................... 21 3 3 0.33 1 0 0 1
.............................................................................................TAGCCGGACGACTTCGAATTG......................................................................................................................................... 21 3 3 0.33 1 1 0 0
......................AAGCGGTACCGCATTCTGCA................................................................................................................................................................................................................. 20 3 6 0.17 1 1 0 0
.................................................................................................................................................................................................................CCGTCGGCCTCACTAAAACT...................... 20 3 8 0.13 1 1 0 0
......................................................................................................................................................................................................................................CCCCAACAGTCGGGCCGAA.. 19 3 12 0.08 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004585:2264593-2264843 - dwi_1645 TTGTGGTGA-AAATCAATATGGCGTCGCCAGGGCGTCAGACGTGTCTACGTGTCAAGGCAGAAGGCCATTAGAGCTGCCAACTTGAAGAAAAAA-ATCGGCCTGAAGA-------------------------------------------------------AACTTAACT--------------AAATTACAAACAAAAATAAGGAAGAACCGTGTCATTTGCTAAAATATTGCTGTTTTTCCTGTATTCAATTTTTCTTCGACCATTCAAGAGGGGCGGCGGTGGGAGTGATTTT-----GAACGAGTTGTCAGCCCCGCTTTG
droVir3 scaffold_12963:19418394-19418458 + TTTTGT-GAAAAATCAATATGGCGTCGATGACGCGTC-TACGTGG-------CTACGGCACG---------GCGCTGCCAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group2:466933-467164 - TC--GT-GA-AAATCAATATGGCGTCATTGA-ACGTC-TTTGTG--------TCGTGGCAAG---------GTGCTGCCAACTTGTCTATGAGAAAGTAGTCTGGTGAGAGATAGTAGATTTCCCGTATACCTTTTGATCGAACGTCAAAGTTAGTTGCAGGAAATTCAACTCCAGAAACATTCGTGCATTAAAAACT----------------------------------------TTTTACATGTTCATAATTTTTT---GTTCCT--AA-------------------GATATAGAAAAAACCGAGTTGTTAGTC--------
droPer2 scaffold_8:3421836-3422067 + TC--GT-GA-AAATCAATATGGCGTCATTGA-ACGTC-TTTGTG--------TCGTGGCAAG---------GTGCTGCCAACTTGTCTATGAGAAAGTAGTCTGGTGAGAGATAGTAGATTTCCCGTATACCTTTTGATCGAACGTCAAAGTTAGTTGCAGGAAATTCAACTCGAGAAACATTCGTGCATTAAAAACA----------------------------------------TTTTACATGTTCATAATTTTTT---GTTCCT--AA-------------------GATATAGAAAAAACCGAGTTGTTAGTC--------
droKik1 scf7180000301725:135890-135953 - TT--GT-GAAAAATCAATATGGCGTCATCGC-ACGCC-TTTGTGT-------TCGTGGCATG---------GCGCTGCCAACCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453904:1140698-1140760 + TT--GT-GA-AAATCAAAATGGAGTCG---------C-TCTGTG--------TCGTGGCAGG---------GCGCTGCCAACTTGCTTGAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTGTGGTGA-AAATCAATATGGCGTCGCCAGGGCGTCAGACGTGTCTACGTGTCAAGGCAGAAGGCCATTAGAGCTGCCAACTTGAAGAAAAAA-ATCGGCCTGAAGA-------------------------------------------------------AACTTAACT--------------AAATTACAAACAAAAATAAGGAAGAACCGTGTCATTTGCTAAAATATTGCTGTTTTTCCTGTATTCAATTTTTCTTCGACCATTCAAGAGGGGCGGCGGTGGGAGTGATTTT-----GAACGAGTTGTCAGCCCCGCTTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................ATTTGCTAAAATATTGCTGTT.......................................................................................2113.00321000
....................................................................................................................................................................................................................................................................TTCGACCATTCAAGAGGGG................................................1911.00101000
..........................................................................................................................................................................................................................................................................................CGGTGGGAGTGATTTT-----GAACGAGTT...............2511.00100100
..............................................................................................................................................................................................................................................................................CAAGAGGGGCGGCGGTGGGAGTGA.................................2411.00100010
...........................................................................................................................................................................................................AAGGAAGAACCGTGTCATT.........................................................................................................1911.00100100
........................................................................................................................................................................................................................................................ATTCAATTTTTCTTCGACCAT..........................................................2111.00100010
...........AATCAATATGGCGTCGCCAGGGC.....................................................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................................................................................................AACGAGTTGTCAGCCCCGCT...2011.00101000
...............................................................................................................................................................................................................................................................................................GGAGTGATTTT-----GAACGAG.................1811.00100010
................................................................................................................................................................................................................AGAACCGTGTCATTTGCTAA...................................................................................................2011.00100010
................................................................................................................................................................................................................................................................................................................AACGAGTTGTCAGCCCCG.....1811.00110000
.................................................................................CTTGAAGAAAAAA-ATCGGCCT................................................................................................................................................................................................................................2111.00110000
.......................................ACGTGTCTACGTGTCAAGG.............................................................................................................................................................................................................................................................................1911.00100001
....................................................................................................................................................................................................................................................................TTCGACCATTCAAGAGGGGCG..............................................2111.00100010
.............................................................................................................................................................................................................GGAAGAACCGTGTCATTTG.......................................................................................................1911.00101000
................................................................GCCATTAGAGCTGCCAACTTG..................................................................................................................................................................................................................................................2111.00101000
................................................................................................TCGGCCTGAAGA-------------------------------------------------------AACTTAACT--------------AAATTAC......................................................................................................................................2811.00110000
.................................................................................................................................................................................................................................................................................................................ACGAGTTGTCAGCCCCGCT...1911.00100100
....................................CAGACGTGTCTACGTGTCAAG..............................................................................................................................................................................................................................................................................2111.00100010
............ATCAATATGGCGTCGCCAGGGCG....................................................................................................................................................................................................................................................................................................2311.00101000
.............TCAATATGGCGTCGCCAGGGC.....................................................................................................................................................................................................................................................................................................2111.00100100
............ATCAATATGGCGTCGCCAGGGC.....................................................................................................................................................................................................................................................................................................2211.00100010
..............CAATATGGCGTCGCCAGGGCG....................................................................................................................................................................................................................................................................................................2111.00101000
...................................................................................TGAAGAAAAAA-ATCGGCC.................................................................................................................................................................................................................................1811.00110000
.............................................................................................................................................................................................................GGAAGAACCGTGTCATTTGCT.....................................................................................................2111.00101000
..........................GCCAGGGCGTCAGACGTGTCTACGT....................................................................................................................................................................................................................................................................................2511.00100010
..........AAATCAATATGGCGTCGCCAGGGCGTCA.................................................................................................................................................................................................................................................................................................2811.00100100
.TGTGGTGA-AAATCAATATGGC................................................................................................................................................................................................................................................................................................................2111.00100001
..........................GCCAGGGCGTCAGACGTGTCTACGTG...................................................................................................................................................................................................................................................................................2611.00100001
.............................................CTACGTGTCAAGGCAGAAGGC.....................................................................................................................................................................................................................................................................2111.00100100
...............AATATGGCGTCGCCAGGGCG....................................................................................................................................................................................................................................................................................................2011.00110000
.....GTGA-AAATCAATATGGCGTCGC...........................................................................................................................................................................................................................................................................................................2211.00110000
..............................................TACGTGTCAAGGCAGAAGG......................................................................................................................................................................................................................................................................1911.00100001
.........................................................................................................................................................................................................................................................TTCAATTTTTCTTCGACCATT.........................................................2111.00100001
droVir3
TTTTGT-GAAAAATCAATATGGCGTCGATGACGCGTC-TACGTGG-------CTACGGCACG---------GCGCTGCCAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............ATCAATATGGCGTCGATGACG......................................................................................................................................................................................................................................................................................................2113.003030000000000000000000000000000000000000000000000000000000000000
...........AATCAATATGGCGTCGATGACG......................................................................................................................................................................................................................................................................................................2212.002100000000000000000000010000000000000000000000000000000000000000
........AAAAATCAATATGGCGTCGA...........................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................TGG-------CTACGGCACG---------GCGCTG..........................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.......................GTCGATGACGCGTC-TACGT............................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............TCAATATGGCGTCGATGACGCGTC-TA...............................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................GATGACGCGTC-TACGTGG-------CTACGGC............................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000100
..............................ACGCGTC-TACGTGG-------CTACGGCACG---------GCG.............................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...............AATATGGCGTCGATGACG......................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...................TGGCGTCGATGACGCGTC-TACG.............................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
...............................CGCGTC-TACGTGG-------CTACGGCACG---------GCG.............................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
...............AATATGGCGTCGATGACGCGTC-TA...............................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.....T-GAAAAATCAATATGGCGTCGA...........................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000010000000000000000000
.............TCAATATGGCGTCGATGACGCG....................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................C-TACGTGG-------CTACGGCACG---------GCGCTG..........................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
............ATCAATATGGCGTCGATGACGC.....................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
dp5
TC--GT-GA-AAATCAATATGGCGTCATTGA-ACGTC-TTTGTG--------TCGTGGCAAG---------GTGCTGCCAACTTGTCTATGAGAAAGTAGTCTGGTGAGAGATAGTAGATTTCCCGTATACCTTTTGATCGAACGTCAAAGTTAGTTGCAGGAAATTCAACTCCAGAAACATTCGTGCATTAAAAACT----------------------------------------TTTTACATGTTCATAATTTTTT---GTTCCT--AA-------------------GATATAGAAAAAACCGAGTTGTTAGTC--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................GTG--------TCGTGGCAAG---------GTGCTGCC........................................................................................................................................................................................................................................................2114.0040400000000
.......................................TTGTG--------TCGTGGCAAG---------GTGCT...........................................................................................................................................................................................................................................................2012.0021000001000
..............CAATATGGCGTCATTGA-ACGTC-.................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................GATAGTAGATTTCCCGTATAC....................................................................................................................................................................................................2111.0010010000000
...................................................................................................GTCTGGTGAGAGATAGTAGAT...............................................................................................................................................................................................................2111.0010000010000
..........................ATTGA-ACGTC-TTTGTG--------TCGTG..............................................................................................................................................................................................................................................................................2111.0010100000000
..........................................TG--------TCGTGGCAAG---------GTGCTGC.........................................................................................................................................................................................................................................................1911.0010100000000
............................................................AG---------GTGCTGCCAACTTGTCTAT.............................................................................................................................................................................................................................................2111.0010100000000
.....T-GA-AAATCAATATGGCGT..............................................................................................................................................................................................................................................................................................................1811.0010100000000
.................................................................................................................................................................GAAATTCAACTCCAGAAACATTC...............................................................................................................................................2311.0010100000000
....................................C-TTTGTG--------TCGTGGCAAG---------GT..............................................................................................................................................................................................................................................................1911.0010100000000
..............................A-ACGTC-TTTGTG--------TCGTGGCA...........................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................AAGTAGTCTGGTGAGAGATAG....................................................................................................................................................................................................................2111.0010000001000
TC--GT-GA-AAATCAATATGGCGTCATT..........................................................................................................................................................................................................................................................................................................2511.0010000001000
...............................................................................................................................ATACCTTTTGATCGAACGTCA...................................................................................................................................................................................2111.0010100000000
.............TCAATATGGCGTCATTGA-ACG....................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................CTGCCAACTTGTCTATGAGAA........................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................TAGTCTGGTGAGAGATAGTAGA................................................................................................................................................................................................................2211.0010000001000
.............................................................................................................................................................GCAGGAAATTCAACTCCAGAA.....................................................................................................................................................2111.0010100000000
....GT-GA-AAATCAATATGGCGTCA............................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................TGTG--------TCGTGGCAAG---------GTGCTGC.........................................................................................................................................................................................................................................................2111.0010000001000
.........................................................................................................................................ATCGAACGTCAAAGTTAGTTGCAG......................................................................................................................................................................2411.0010100000000
.........................CATTGA-ACGTC-TTTGTG--------TCG................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................AG---------GTGCTGCCAACTTGTCTATG............................................................................................................................................................................................................................................2211.0010100000000
droPer2
TC--GT-GA-AAATCAATATGGCGTCATTGA-ACGTC-TTTGTG--------TCGTGGCAAG---------GTGCTGCCAACTTGTCTATGAGAAAGTAGTCTGGTGAGAGATAGTAGATTTCCCGTATACCTTTTGATCGAACGTCAAAGTTAGTTGCAGGAAATTCAACTCGAGAAACATTCGTGCATTAAAAACA----------------------------------------TTTTACATGTTCATAATTTTTT---GTTCCT--AA-------------------GATATAGAAAAAACCGAGTTGTTAGTC--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................AAGTAGTCTGGTGAGAGATAG....................................................................................................................................................................................................................2111.001000010
....................................................................................................................................TTTTGATCGAACGTCAAAGTT..............................................................................................................................................................................2111.001000010
.......................................TTGTG--------TCGTGGCAAG---------GTGCT...........................................................................................................................................................................................................................................................2011.001000001
.................TATGGCGTCATTGA-ACGTC-TT...............................................................................................................................................................................................................................................................................................2111.001000100
.............TCAATATGGCGTCATTGA-AC.....................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................GTATACCTTTTGATCGAACGTC....................................................................................................................................................................................2211.001010000
.........................................GTG--------TCGTGGCAAG---------GTGCTGCC........................................................................................................................................................................................................................................................2111.001000001
....GT-GA-AAATCAATATGGCGTCA............................................................................................................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................TTCAACTCGAGAAACATTCG..............................................................................................................................................2011.001000100
........................................................................................ATGAGAAAGTAGTCTGGTGAGA.........................................................................................................................................................................................................................2211.001000001
..........................................TG--------TCGTGGCAAG---------GTGCTGTTT.......................................................................................................................................................................................................................................................2130.331010000
droKik1
TT--GT-GAAAAATCAATATGGCGTCATCGC-ACGCC-TTTGTGT-------TCGTGGCATG---------GCGCTGCCAACCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TT--GT-GA-AAATCAAAATGGAGTCG---------C-TCTGTG--------TCGTGGCAGG---------GCGCTGCCAACTTGCTTGAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 02:06 AM