ID:

dwi_1628

 Coordinate:

scf2_1100000004585:1532060-1532210 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.5 -26.4 -26.3

Flybase annnotation

CDS [Dwil\GK24578-cds]; exon [dwil_GLEANR_8714:2]; intron [Dwil\GK24578-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGTTGGGGCTTTAAATATACACTTAATGGTATATAAAGGGCCCACGAAAGAGTGGGTGGTGGGTGGAGGAGGAGTAGGAGGGGAGCATTTTATGCTTTGCCCTTGATCAAGGAGAAGTTTGGGGTATGGGTAGAATGAGTTTGATATATTGATACTTCTTATGCTAATATCTTTCGTTTGCTTTACTTTTCCCTTTACAGGCTAAATCCCCCGAATCAAAGAAAGCCAAGAAGGCAGCCGATGGCGGCGA
***************************************************************(((((((((((....(((((((((((...))))))..)))))..(((((......)))))((((((((.((.((.(((.......))).)).)).))))))))....)))))).)))))..******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M045
female body
 V119
head
 M020
head
...............................................................GTGGAGGAGGAGTAGGAGGGGAG..................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0
.................................ATAAAGGGCCCACGAAAGAGTGGGT................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................TATGCTAATATCTTTCGTTTGCTT................................................................... 24 0 1 1.00 1 0 1 0 0 0
.......................................GGCCAACGAAAGAGTGGGT................................................................................................................................................................................................. 19 1 1 1.00 1 0 0 0 1 0
...........................................CACGAAAGAGTGGGTGGTGGGTGGA....................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0
.....................................................................................................................GTTTGGGGTATGGGTAGAAT.................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CAAAGAAAGCCAAGAAGG................ 18 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................GTAGAATGAGTTTGATATATTGC.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1
....................................................................................................................................................................................................................CGAATCAAAGAAAGCCAAGAAGGCAGC............ 27 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................................................................AAGCCAAGAAGGCAGCCGGTGG...... 22 1 1 1.00 1 0 1 0 0 0
..............................TATATAAAGGGCCCACGAAA......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................CCCGAATCAAAGAAAGCCAAGAAGGC............... 26 0 1 1.00 1 1 0 0 0 0
.......................................................GGTGGTGGGTGGAGGAGGAGTAG............................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................AAGAAGGCAGCCGATGGCGGCG. 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................GTAGAATGAGTTTGATATATTGATACT.............................................................................................. 27 0 1 1.00 1 0 0 0 0 1
....................................................................................................................................................................................................................................AAGAAGGCAGCCGATGGC..... 18 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................................AAAGCCAAGAAGGCAGCCGATGGC..... 24 0 1 1.00 1 0 0 1 0 0
.....................................................................................................................GTTTGGGGTATGGGTAGAATGA................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
....................................................GTGGGTGGTGGGTGGAGGAGGA................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................TTCTTATGCTAATATCTTTCGTTTGCT.................................................................... 27 0 1 1.00 1 0 0 0 0 1
........................................................GTGGTGGGTGGAGGAGGAGTA.............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0
.............................................CGAAAGAGTGGGTGGTGGGT.......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................AAGCCAAGAAGGCAGCCGATG....... 21 0 1 1.00 1 1 0 0 0 0
.......................................................GGTGGTGGGTGGAGGAGGAG................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
...................................AAAGGGCCCACGAAAGAGTGGG.................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................AGCCAAGAAGGCAGCCGATGGC..... 22 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................................CAAAGAAAGCCAAGAAGGC............... 19 0 1 1.00 1 0 0 1 0 0
....................................................GTGGGTGGTGGGTGGAGGAG................................................................................................................................................................................... 20 0 2 0.50 1 0 0 0 1 0
....................................................GTGGGTGGTGGGTGGAGG..................................................................................................................................................................................... 18 0 4 0.25 1 0 1 0 0 0
............................................ACGAAAGAGTAGGTGGGG............................................................................................................................................................................................. 18 2 5 0.20 1 0 1 0 0 0
.................................................................................................................................................TATATGGATACTTCTTAT........................................................................................ 18 1 5 0.20 1 0 1 0 0 0
....................................................GTGGGTGGTGGGTGGAGGAT................................................................................................................................................................................... 20 1 5 0.20 1 0 0 0 1 0
.......................................................................................................................................................................................................................ATCAAAGAAAGCAACCAAGGC............... 21 3 11 0.18 2 0 0 2 0 0
............................................ACGAACGTGTGGGTGGTTGGT.......................................................................................................................................................................................... 21 3 6 0.17 1 0 1 0 0 0
.................................................................................................................AGAATTTTGGGGCATGGG........................................................................................................................ 18 2 8 0.13 1 0 0 1 0 0
......................................................................................................................TTTGGGGTATGGGGCGATT.................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

CACAACCCCGAAATTTATATGTGAATTACCATATATTTCCCGGGTGCTTTCTCACCCACCACCCACCTCCTCCTCATCCTCCCCTCGTAAAATACGAAACGGGAACTAGTTCCTCTTCAAACCCCATACCCATCTTACTCAAACTATATAACTATGAAGAATACGATTATAGAAAGCAAACGAAATGAAAAGGGAAATGTCCGATTTAGGGGGCTTAGTTTCTTTCGGTTCTTCCGTCGGCTACCGCCGCT
*******************************************************************(((((((((((....(((((((((((...))))))..)))))..(((((......)))))((((((((.((.((.(((.......))).)).)).))))))))....)))))).)))))..*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
............................................................................................................................................................AAGATTAGGATTATAGAAAGC.......................................................................... 21 2 2 0.50 1 1
.....................................................................................................................CAAACGCCATGCCCATCTA................................................................................................................... 19 3 13 0.08 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004585:1532010-1532260 + dwi_1628 G-------------------------------TGTTG-GGGCTTTAAATATACACTTAATGG-TA--TATAAAGG-GCCCA-CGA------A---------AGAGTGGGTG-----------GTGGGTG----------GAGGAGGA----------GTAGGAGGGGA--GCATTTTA------------------TGCTTTGCCCTTGATCAAGGAGAAGTTTGGGG----TATGGGTAGAATGAGTTT---------------GAT-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAT-----------------------------------------------------------------------------------A----------CTTCTTATGCTAA-----TATCTTTCG-------TT-TGCTT--------TACTTTTC-CC-----TTTACAGGCTAAATCCCCCGAATCAAAGAAAGCCAAGAAGGCAG------CCGATGGCGGCGA
droVir3 scaffold_12963:11378092-11378406 + dvi_11360 G-------------------------------TTTTGTGGGCTTTAAATATACATTTTATGGTCA--TATACACGTACACAA--ACATACACACCCATAAACATGCTGTAG-----------CT--------------ATGTGGAGAAA---AATGAGTATGTTGGGC--TTATGTTTT-CTTTCCATGAACAATTCGTTTTGCCCTTGATCAAGGAGAAGTGTGGGG----TATGCCTTGCTCACCCA----------------------------------------------------------------------------------AA-------------AG-----------------GTTCCAGT-----------------------AGCAACAACAGAAG-CC---------------------------TTCATTATCGAT-----------------------------------------------------------------------------------A----------TCCCT--TACTCA-----TTT---------GACATC-TTTGT--------TTTATTTG-CA-----TTTGCAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAAGATAAA---CCCGCTGATGGTGA
droMoj3 scaffold_6500:20127637-20127972 + G-------------------------------TTTTGTGGGCTTAAAATATACTTTTTACGACCG--TGTACACGCACACAC--A------CACCCATACAGATGAATC-------------ACGCTTGTT-------GGGAGA---AC----ATGCGTATGTTGGCT--TCATATTTT-GTGTCCATCAACAATACG-TTTGTCCTTGATCAAGGAGAAGTGTGGGG----TATAAAATGGGTGCCCC----------------------------------------------------------------------------------AA-------------AG-----------------GTTTCAGC-----------------------TGAAGCAGCAGCCG-CCGATGGAAGAGCAATAGCAGTCCTTTGTTTTGTTATCGAT-----------------------------------------------------------------------------------A----------AACCT--TACTCA-----CTT---------GACATT-TGATT--------CCTTCCTT-CC-----TTTTCAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAAGATAAA---CCCGCTGATGGCGA
droGri2 scaffold_15252:5495588-5495931 + GCTTTGCTACACAGTAAAAGGCCATTTTCTTGTTTTGTGGGCTTAAAATATACATTTTATGGGTA--TGTACACTCACACAC--A------CAC---------ATTCGC-------------ATGTGTGTAGGTGGCTAAGTGGAGGAGTGTAATTTGTATGTTGGTT--TTATGTTTTGGTTTCCATGAACAATTCGCTTTGCCCTTGATCAAGGAGATGTGTGGGGTGGGTTTGAATTGGGCGCCCAG---------------TCGCAGCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTATCGAT-----------------------------------------------------------------------------------A----------TATTT--TACTTAACTAATGTCCCCCA-------T--CTCTC--------CACTCTTTTTACACTCCTTGCAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAAGATAAA---CCCGCTGATGGCGA
dp5 4_group4:2094072-2094289 + G-------------------------------TTTTGTGGGCTGAAAATATACTTTTTATGGCCA--TGTATA-------------------------------------------------GTGTGTG----------AAGGGGGAATTA----------GATG-GAGCT--TT---------------------TGCTTTGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCACAG---------------GACCAGAATCCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAATCGT----------------------------------------------------------------------------------------------------TATGCTCA-----TTT----------------CTCTC--------TATT------T-----TTTCCAGGCCAAATCCGCCGAATCAAAGAAGGCCAAGAAGG---------CCGCCGACGGCGA
droPer2 scaffold_10:1101310-1101526 + G-------------------------------TTTTGTGGGCTGAAAATATACTTTTTATGGCCA--TGTATA-------------------------------------------------GTGTGTG----------AAGGGGGAATTA----------GATG-GAGCT--TT---------------------TGCTTTGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCACAG---------------GACCAGAATCCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAATCGT----------------------------------------------------------------------------------------------------TATGCTCA-----TTT----------------CTCTC--------TATT------------TTTCCAGGCCAAATCCGCCGAATCAAAGAAGGCCAAGAAGG---------CCGCCGACGGCGA
droAna3 scaffold_10220:1383-1613 + G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGGATA--TGTACACACGCACC--AA------A-----------A----------------------------------AAGTGGGGAGTGG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCATGG---------------GACCT------AATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATCGCAGAAAATTCAACCAA--------------------------------------------------------------------------------GCCC-TTTGCTCA-----ATTTC----------------C-TTATTTATCTATT---T-TC-----TGCTTAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAGG---------CTGCTGATGGCGA
droBip1 scf7180000396574:360093-360318 + G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACC--GC------A-----------A----------------------------------AAATGGGGAATGG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCATGG---------------GACCC------TATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATCGCTGAAAAT----------------------------------------------------------------------------TA--AACCA---AACC-TTTGCTCA-----TTTTC----------------CTT---ATG--TATT---C-TC-----TCTTTAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAGG---------CTGCTGATGGTGA
droKik1 scf7180000302271:218527-218794 + GCCT--------------------------GTTTTTGTGGGCTGAAAATATACATTTTATGACTATATGTATACACGCACA-CGG------G-----------ACTTGGAGGGACTGACTGGGAGTGCG----------ATTG------GG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCACAC---------------ACA---------------------------------------------------------------GG-------------G-----------------CGGGCTGTT-----------------------ATCACCAACACG------------------------------------------------------------------------------------------------------------------------------------------AACC-TTTACTAA-----CTTTT-CCGTTTGCCATT-TTCTC--------TATTCCCT-CT-----TTTCCAGGCCAAATCCGCAGAATCAAAGAAAGCCAAGAAGGCCGCC---GCCGCCGATGGCGA
droFic1 scf7180000453924:684304-684410 + T-------------------------------TA-------------ATATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTAAACC-TTTACTAA-----AAT----------------CGTTCTACTTG----CT-TTG-CT-----TTTTCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAAGCCGCC---GCCGCCGATGGCGA
droEle1 scf7180000491273:422661-422752 - G------------------------------------TGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACAACGA------G-----------AGTT-------------------------------GCGAGGGGTA-TG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000766156:69391-69493 - GCTT--------------------------GTTTTTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACATCGA------G-----------AGTT-------------------------------GAGAGGGGTATTG----------AA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302188:1758450-1758812 + G-------------------------------TTTTGTGGGCTGAAAATATACATTTTATGACTG--TGTACACACGCACAG-GG------A-----------AGCT-------------------------------AAGAGGGGTACTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGAAACCTTCCCTCGTTTCTGGCCA------T-TTCCCTGC--------------------T---------T--T--TCCTGGTCTAG-------------AT-----------------GCGTAGGTATTTACATATTTTGTGTGTATTTGGG----------------------------------------------------------GGCAACTAAGACCTGGGTTCAACACCCACAGCTGTTTAATGAATTTGCCTCTAATAAAATATGGTT----------------CTCAAGACATT-TTCACTAA-----TTC---------------CCCTTC--------GATT----TCCTGCTTTTTCCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAAGCCGCCGCCGCCGCCGATGGCGA
droTak1 scf7180000415705:503679-503773 + G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACG--GG------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409554:3355846-3355941 - G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACA-GGA------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:2755710-2755805 + G-------------------------------TTTTGTGTGCTGAAAATATACATTTTATGACTA--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:2643281-2643429 + G-------------------------------TTTTGTGTGCTGAAAATATACATTTTATGACTA--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GCGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGTAG---------------GACCA------T-TTCGCT----CGGTAATTCTCCCTAATATCCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_5:921791-922144 + G-------------------------------TTTTGTGTGCTGAAAATATACATTTTATGACTG--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGTAG---------------GACCA------T-TTCGCT----AGGTAATTCTCCCTAATATCCTTTAGTCTGTTTCTC-------AGATTAATATCAAAAATGCATAATTAATAGTGACGGGCCCT---------------------------------------------------------------------------------------------------------------AATTTCTGTTCAATAGACTTGCTTGTAATGGAATAA--TTCATCATCTGAACAAGAACCAAAGGAAC-TCTTCTAA-----CTT----------------CTCTC--------TCCTCTTT-CG-----CTTCCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAGGCCGCG---GCCGCCGATGGAGA
droYak3 2L:2751274-2751567 + G-------------------------------TTTTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACG--GC------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCTTAG---------------GACCA------T-TTCGCTGC--------------------TCTTCTAGTTA--T--TCTAGCTCTAG-------------AG-----------------GCCTAAGC-----------------------TT------------GC-----TAATAGCAA------------------------------A----------------------------------------------------------ATCA--ATCATCATTTGAATA--AACCAAAATAAC-TCTACTAA-----TTT---------------TCTCCC--------TAAT----TTGCACT-CTTTCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAGGCAGCG---GCCGCCGATGGAGA
droEre2 scaffold_4929:2808477-2808801 + G-------------------------------TTTTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACG--GC------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGTAG---------------GTCCA------T-TTCGATGAACTCCTGATTTCCCCTGATTTCTTCTAGTTC--T--TCTAGCTCTAG-------------AG-----------------CACTAATA-----------------------GT------------GC-----TTAAAGTAG------------------------------AGTAAACCA-----------------------------AAAGAACT--CTACT------------------AGTAGAGTA--AACCAAAAGAAC-TCTACTAA-----CTT---------------TCTCTC--------TATT----TTGCACT-CTTCCAGGCCAAATCCGCAGAATCAAAGAAGGCTAAGAAGGCAGCG---GCCGCCGATGGAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
G-------------------------------TGTTG-GGGCTTTAAATATACACTTAATGG-TA--TATAAAGG-GCCCA-CGA------A---------AGAGTGGGTG-----------GTGGGTG----------GAGGAGGA----------GTAGGAGGGGA--GCATTTTA------------------TGCTTTGCCCTTGATCAAGGAGAAGTTTGGGG----TATGGGTAGAATGAGTTT---------------GAT-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAT-----------------------------------------------------------------------------------A----------CTTCTTATGCTAA-----TATCTTTCG-------TT-TGCTT--------TACTTTTC-CC-----TTTACAGGCTAAATCCCCCGAATCAAAGAAAGCCAAGAAGGCAG------CCGATGGCGGCGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................GTG----------GAGGAGGA----------GTAGGAGGGGA--G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200020
....................................................................ATAAAGG-GCCCA-CGA------A---------AGAGTGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCTAA-----TATCTTTCG-------TT-TGCTT--------...............................................................................2411.00100010
...............................................................................CA-CGA------A---------AGAGTGGGTG-----------GTGGGTG----------GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
............................................................................................................................................................................................................................GTTTGGGG----TATGGGTAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAAGCCAAGAAGG......................1811.00100010
.............................................................................................................................................................................................................................................GTAGAATGAGTTT---------------GAT-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGC................................................................................................................................................................................................................................2311.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATCAAAGAAAGCCAAGAAGGCAG------C............2711.00101000
...............................................................TA--TATAAAGG-GCCCA-CGA------A---------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGAATCAAAGAAAGCCAAGAAGGC.....................2611.00100100
...........................................................................................................GGTG-----------GTGGGTG----------GAGGAGGA----------GTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGCAG------CCGATGGCGGCG.2211.00100100
.............................................................................................................................................................................................................................................GTAGAATGAGTTT---------------GAT-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAT-----------------------------------------------------------------------------------A----------CT...............................................................................................................................2711.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGCAG------CCGATGGC.....1811.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCAAGAAGGCAG------CCGATGGC.....2411.00101000
............................................................................................................................................................................................................................GTTTGGGG----TATGGGTAGAATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
........................................................................................................GTGGGTG-----------GTGGGTG----------GAGGAGGA----------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTATGCTAA-----TATCTTTCG-------TT-TGCT........................................................................................2711.00110000
............................................................................................................GTG-----------GTGGGTG----------GAGGAGGA----------GTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
..................................................................................CGA------A---------AGAGTGGGTG-----------GTGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCAAGAAGGCAG------CCGATG.......2111.00100100
...........................................................................................................GGTG-----------GTGGGTG----------GAGGAGGA----------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................AAAGG-GCCCA-CGA------A---------AGAGTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGAAGGCAG------CCGATGGC.....2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAAGCCAAGAAGGC.....................1911.00101000
........................................................................................................GTGGGTG-----------GTGGGTG----------GAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100001
........................................................................................................GTGGGTG-----------GTGGGTG----------GAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100010
........................................................................................................GTGGGTG-----------GTGGGTG----------GAGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100001
droVir3
G-------------------------------TTTTGTGGGCTTTAAATATACATTTTATGGTCA--TATACACGTACACAA--ACATACACACCCATAAACATGCTGTAG-----------CT--------------ATGTGGAGAAA---AATGAGTATGTTGGGC--TTATGTTTT-CTTTCCATGAACAATTCGTTTTGCCCTTGATCAAGGAGAAGTGTGGGG----TATGCCTTGCTCACCCA----------------------------------------------------------------------------------AA-------------AG-----------------GTTCCAGT-----------------------AGCAACAACAGAAG-CC---------------------------TTCATTATCGAT-----------------------------------------------------------------------------------A----------TCCCT--TACTCA-----TTT---------GACATC-TTTGT--------TTTATTTG-CA-----TTTGCAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAAGATAAA---CCCGCTGATGGTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................AG-----------CT--------------ATGTGGAGAAA---AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000002000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAAAGATAAA---CCCGCT........2112.002001000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................TGTGGAGAAA---AATGAGTATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGATAAA---CCCGCTGATGGT..2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGATAAA---CCCGCTGATGGT..2211.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TCAAGGAGAAGTGTGGGG----TA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TACTCA-----TTT---------GACATC-TTTGT--------...............................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAAGCCAAGAAAG......................1811.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAAGCCAAGAAAGATAAA---CC............2711.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCCGAATCAAAGAAAGCCAAG..........................2611.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAAGCCAAGAAAGAT....................2211.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................GTATGTTGGGC--TTATGTTTT-CTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATAAA---CCCGCTGATGGT..2111.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAGATAAA---CCCGCT........1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAAGCCAAGAAA.......................1911.001000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCGAATCAAAGAAAGCCAAG..........................2511.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCCGCCGAATCAAAGAAAGC..............................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGATAAA---CCCGCTGAT.....2211.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
G-------------------------------TTTTGTGGGCTTAAAATATACTTTTTACGACCG--TGTACACGCACACAC--A------CACCCATACAGATGAATC-------------ACGCTTGTT-------GGGAGA---AC----ATGCGTATGTTGGCT--TCATATTTT-GTGTCCATCAACAATACG-TTTGTCCTTGATCAAGGAGAAGTGTGGGG----TATAAAATGGGTGCCCC----------------------------------------------------------------------------------AA-------------AG-----------------GTTTCAGC-----------------------TGAAGCAGCAGCCG-CCGATGGAAGAGCAATAGCAGTCCTTTGTTTTGTTATCGAT-----------------------------------------------------------------------------------A----------AACCT--TACTCA-----CTT---------GACATT-TGATT--------CCTTCCTT-CC-----TTTTCAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAAGATAAA---CCCGCTGATGGCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAATCAAAGAAAGCCAAGAAAG......................2511.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCCGCCGAATCAAAGAAAGCCAAG..........................2811.001100000
.................................................ATACTTTTTACGACCG--TGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
.................................................................................C--A------CACCCATACAGATGAATC-------------AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
....................................................................................................AGATGAATC-------------ACGCTTGTT-------GGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAAGCCAAGAAAG......................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAAGCCAAGAAAGAT....................1911.001000010
...........................................................................................................................................................................................................................................................................................................................................AA-------------AG-----------------GTTTCAGC-----------------------TGAAGCAGCAGCC..........................................................................................................................................................................................................................................................................2511.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCCG-CCGATGGAAGAGC...........................................................................................................................................................................................................................................................2211.001000010
....................................................................................A------CACCCATACAGATGAATC-------------AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................................................................................................................................................................................................ATACG-TTTGTCCTTGATCAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............................................................................................................................................................ATGTTGGCT--TCATATTTT-GTGTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....................................................................................................GATGAATC-------------ACGCTTGTT-------GGGAGA---AC----A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCCAAGAAAGATAAA---CC............2111.001100000
..........................................................................................................ATC-------------ACGCTTGTT-------GGGAGA---AC----ATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droGri2
GCTTTGCTACACAGTAAAAGGCCATTTTCTTGTTTTGTGGGCTTAAAATATACATTTTATGGGTA--TGTACACTCACACAC--A------CAC---------ATTCGC-------------ATGTGTGTAGGTGGCTAAGTGGAGGAGTGTAATTTGTATGTTGGTT--TTATGTTTTGGTTTCCATGAACAATTCGCTTTGCCCTTGATCAAGGAGATGTGTGGGGTGGGTTTGAATTGGGCGCCCAG---------------TCGCAGCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTATCGAT-----------------------------------------------------------------------------------A----------TATTT--TACTTAACTAATGTCCCCCA-------T--CTCTC--------CACTCTTTTTACACTCCTTGCAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAAGATAAA---CCCGCTGATGGCGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................TGTGTGTAGGTGGCTAAGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAAGCCAAGAAAGATAAA---CC............2711.00101
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAAGCCAAGAAAGAT....................2011.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCGAATCAAAGAA.................................1811.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAGCCAAGAAAGATAAA---CC............2311.00110
dp5
G-------------------------------TTTTGTGGGCTGAAAATATACTTTTTATGGCCA--TGTATA-------------------------------------------------GTGTGTG----------AAGGGGGAATTA----------GATG-GAGCT--TT---------------------TGCTTTGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCACAG---------------GACCAGAATCCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAATCGT----------------------------------------------------------------------------------------------------TATGCTCA-----TTT----------------CTCTC--------TATT------T-----TTTCCAGGCCAAATCCGCCGAATCAAAGAAGGCCAAGAAGG---------CCGCCGACGGCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGAATCAAAGAAGGCCAAGAAGG---------C............2711.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATCAAAGAAGGCCAAGAAGG---------C............2411.0010100000000
.....................................................................................................................................................................................................................................................CACAG---------------GACCAGAATCCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------C........................................................................................................................................................................................................................................2111.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGG---------CCGCCGACGGCGA2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATCAAAGAAGGCCAAGAA........................2111.0010010000000
.........................................................................................................................................................................................................................................TTGAGTTGGGCGCACAG---------------GACCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
droPer2
G-------------------------------TTTTGTGGGCTGAAAATATACTTTTTATGGCCA--TGTATA-------------------------------------------------GTGTGTG----------AAGGGGGAATTA----------GATG-GAGCT--TT---------------------TGCTTTGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCACAG---------------GACCAGAATCCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAATCGT----------------------------------------------------------------------------------------------------TATGCTCA-----TTT----------------CTCTC--------TATT------------TTTCCAGGCCAAATCCGCCGAATCAAAGAAGGCCAAGAAGG---------CCGCCGACGGCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................ATTA----------GATG-GAGCT--TT---------------------TGCTTTGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGG---------CCGCCGACGGC..1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCCAAGAAG.......................1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAAAGAAGGCCAAGAAGG---------C............2311.001001000
droAna3
G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGGATA--TGTACACACGCACC--AA------A-----------A----------------------------------AAGTGGGGAGTGG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCATGG---------------GACCT------AATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATCGCAGAAAATTCAACCAA--------------------------------------------------------------------------------GCCC-TTTGCTCA-----ATTTC----------------C-TTATTTATCTATT---T-TC-----TGCTTAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAGG---------CTGCTGATGGCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGG---------CTGCTGATGGC..1821.002110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAATCCGCCGAATCAAAGAAAGC..............................2620.501010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGAAGG---------CTGCTGATGGC..2020.501010000
.................................................................................................................................................................................................................................GG-----TTTGAGTTGGGCGCATGG---------------GA........................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCTATT---T-TC-----TGCTTAG........................................................1920.501000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCAAGAAGG---------CTGCTGAT.....2120.501010000
...................................................................................................................................................GTGG----------GA--------------------------------------TGCCCTTGATCAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAAGG---------CTGCTGATGGC..2120.501100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATCAAAGAAAGCCAAGAA........................2120.501000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAATCCGCCGAATCAAA....................................2020.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCCGCCGAATCAAAGAAAGCC.............................2420.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAATCCGCCGAATCAAAGAAAG...............................2520.501010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGAAGG---------CTGCTGATG....2020.501100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCGAATCAAAGAAAGCC.............................2220.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAAGAAAGCCAAGAAGG---------C............2220.501010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGG---------CTGCTGATGGC..1920.501010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCCGCCGAATCAAAGAAAGC..............................2320.501010000
droBip1
G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACC--GC------A-----------A----------------------------------AAATGGGGAATGG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCATGG---------------GACCC------TATT------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATCGCTGAAAAT----------------------------------------------------------------------------TA--AACCA---AACC-TTTGCTCA-----TTTTC----------------CTT---ATG--TATT---C-TC-----TCTTTAGGCTAAATCCGCCGAATCAAAGAAAGCCAAGAAGG---------CTGCTGATGGTGASizeHit CountTotal NormTotal
No Reads
droKik1
GCCT--------------------------GTTTTTGTGGGCTGAAAATATACATTTTATGACTATATGTATACACGCACA-CGG------G-----------ACTTGGAGGGACTGACTGGGAGTGCG----------ATTG------GG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCACAC---------------ACA---------------------------------------------------------------GG-------------G-----------------CGGGCTGTT-----------------------ATCACCAACACG------------------------------------------------------------------------------------------------------------------------------------------AACC-TTTACTAA-----CTTTT-CCGTTTGCCATT-TTCTC--------TATTCCCT-CT-----TTTCCAGGCCAAATCCGCAGAATCAAAGAAAGCCAAGAAGGCCGCC---GCCGCCGATGGCGASizeHit CountTotal NormTotal
No Reads
droFic1
T-------------------------------TA-------------ATATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTAAACC-TTTACTAA-----AAT----------------CGTTCTACTTG----CT-TTG-CT-----TTTTCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAAGCCGCC---GCCGCCGATGGCGASizeHit CountTotal NormTotal
No Reads
droEle1
G------------------------------------TGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACAACGA------G-----------AGTT-------------------------------GCGAGGGGTA-TG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCTT--------------------------GTTTTTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACATCGA------G-----------AGTT-------------------------------GAGAGGGGTATTG----------AA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
G-------------------------------TTTTGTGGGCTGAAAATATACATTTTATGACTG--TGTACACACGCACAG-GG------A-----------AGCT-------------------------------AAGAGGGGTACTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGAAACCTTCCCTCGTTTCTGGCCA------T-TTCCCTGC--------------------T---------T--T--TCCTGGTCTAG-------------AT-----------------GCGTAGGTATTTACATATTTTGTGTGTATTTGGG----------------------------------------------------------GGCAACTAAGACCTGGGTTCAACACCCACAGCTGTTTAATGAATTTGCCTCTAATAAAATATGGTT----------------CTCAAGACATT-TTCACTAA-----TTC---------------CCCTTC--------GATT----TCCTGCTTTTTCCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAAGCCGCCGCCGCCGCCGATGGCGASizeHit CountTotal NormTotal
No Reads
droTak1
G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACG--GG------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
G-------------------------------T-TTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACA-GGA------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
G-------------------------------TTTTGTGTGCTGAAAATATACATTTTATGACTA--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................TGCCCTTGATCAAGGAGATGTGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................A--------------------------------------TGCCCTTGATCAAGGAGATGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CCCTTGATCAAGGAGATGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.........................................................................................................................................................................................................TGCCCTTGATCAAGGAGATGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TG----------GA--------------------------------------TGCCCTTGATCAAGGAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................G------A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................CTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................G------A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTATGACTA--TGTACACACGCACA--GG------A-----------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CACGCACA--GG------A-----------AGTT-------------------------------GAGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GCACA--GG------A-----------AGTT-------------------------------GAGAGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................GCCCTTGATCAAGGAGATGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................TGTACACACGCACA--GG------A-----------AGTT-------------------------------GAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................A--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................A--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................CCCTTGATCAAGGAGATGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GTACACACGCACA--GG------A-----------AGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................CACA--GG------A-----------AGTT-------------------------------GAGAGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................CCTTGATCAAGGAGATGTGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CTTGATCAAGGAGATGTGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................GGGGTATTG----------GA--------------------------------------TGCCCTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G-------------------------------TTTTGTGTGCTGAAAATATACATTTTATGACTA--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GCGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGTAG---------------GACCA------T-TTCGCT----CGGTAATTCTCCCTAATATCCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................GTGGG-----TTTGAGTTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
.............................................................................................................................................................................................................................................GTTGGGCGCGTAG---------------GACCA------T-TTCGCT----C..................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.........................................................................................................................................................................................................................................................................GACCA------T-TTCGCT----CGGTAATTCTCCCT.....................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
droSec2
G-------------------------------TTTTGTGTGCTGAAAATATACATTTTATGACTG--TGTACACACGCACA--GG------A-----------AGTT-------------------------------GAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGTAG---------------GACCA------T-TTCGCT----AGGTAATTCTCCCTAATATCCTTTAGTCTGTTTCTC-------AGATTAATATCAAAAATGCATAATTAATAGTGACGGGCCCT---------------------------------------------------------------------------------------------------------------AATTTCTGTTCAATAGACTTGCTTGTAATGGAATAA--TTCATCATCTGAACAAGAACCAAAGGAAC-TCTTCTAA-----CTT----------------CTCTC--------TCCTCTTT-CG-----CTTCCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAGGCCGCG---GCCGCCGATGGAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGAATCAAAGAAGGCCAAGAA........................2511.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCG---GCCGCCGATGGAGA2111.0010010
..........................................................................................................................................................................................................GCCCTTGATCAAGGAGATGTGTGGG-----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGCCGCG---GCCGCCGATGGAGA2511.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAGAAGGCCGCG---GCCGCCG.......2411.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGAATCAAAGAAGGCCAA...........................2411.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCAATAGACTTGCTT........................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCGCG---GCCGCCGATGGAGA2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----CTT----------------CTCTC--------TCCTCTTT-CG-----CTTCCAG........................................................2711.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGCCGCG---GCCGCCGATGG...2411.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGCCGCG---GCCGCCGATGG...2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGAATCAAAGAAGGCCAAGAAG.......................2511.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCTGAACAAGAACCAAAG.................................................................................................................................2311.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGCCGCG---GCCGCCGATG....2311.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGCCGCG---GCCGCCGATGGAG.2611.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGCCGCG---GCCGCCGATGGAGA2711.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGCCGCG---GCCGCCGATGGA..2511.0010100
..........................................................................................................................................................................................................................................TGAGTTGGGCGCGTAG---------------GACC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
droYak3
G-------------------------------TTTTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACG--GC------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCTTAG---------------GACCA------T-TTCGCTGC--------------------TCTTCTAGTTA--T--TCTAGCTCTAG-------------AG-----------------GCCTAAGC-----------------------TT------------GC-----TAATAGCAA------------------------------A----------------------------------------------------------ATCA--ATCATCATTTGAATA--AACCAAAATAAC-TCTACTAA-----TTT---------------TCTCCC--------TAAT----TTGCACT-CTTTCAGGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAGGCAGCG---GCCGCCGATGGAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAGGCCAAGAAGGCAGCG---GC............2515.00501300010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCCAAGAAGGCAGC..................2412.00201100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCCAAGAAGGCAGCG---GC............2112.00201000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAGAAGGCAGCG---GCCGCC........2312.00200200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCCAAGAAGGC.....................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCAAGAAGGCAGCG---GC............2011.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAGCG---GCCGCCGATGGAG.2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCAAAGAAGGCCAAGAAGG......................2511.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAGGCCAAGAAGGCAGCG---GC............2411.00100000010000
......................................................................ACACACGCACG--GC------A-----------AGTT-------------------------------AAGAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGAAGGCAGCG---GCCGCCGATGGA..2611.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAGCG---GCCGCCGATGGA..2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCCAAGAAGGCAGCG---GCCGCC........2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCG---GCCGCCGATGGAGA2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCCAAGAAGGCAGCG---GC............2711.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGCCAAGAAGGCAGC..................1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGAAGGCCAAGAAGGCAGCG---GC............2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGAATCAAAGAAGGCCAAG..........................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGCAGCG---GCCGCCGATG....2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAAGAAGGCCAAGAAGGCAGC..................2511.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGCCAAGAAGGCAGCG---GCC...........2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGAATCAAAGAAGGCCA............................2311.00100000010000
droEre2
G-------------------------------TTTTGTGGGCTGAAAATATACATTTTATGACTA--TGTACACACGCACG--GC------A-----------AGTT-------------------------------AAGAGGGGTATTG----------GA--------------------------------------TGCCCTTGATCAAGGAGATGTGTGGG-----TTTGAGTTGGGCGCGTAG---------------GTCCA------T-TTCGATGAACTCCTGATTTCCCCTGATTTCTTCTAGTTC--T--TCTAGCTCTAG-------------AG-----------------CACTAATA-----------------------GT------------GC-----TTAAAGTAG------------------------------AGTAAACCA-----------------------------AAAGAACT--CTACT------------------AGTAGAGTA--AACCAAAAGAAC-TCTACTAA-----CTT---------------TCTCTC--------TATT----TTGCACT-CTTCCAGGCCAAATCCGCAGAATCAAAGAAGGCTAAGAAGGCAGCG---GCCGCCGATGGAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAGGCTAAGAAGGCAGCG---GCC...........25118.001800000018
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAGGCAGCG---GCCGCCGATGGAGA2714.0040000103
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCTAAGAAGGCAGC..................2413.0031000200
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGCTAAGAAGGCAGCG---GC............2212.0020101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCTAAGAAGGCAGCG---GC............2712.0020000200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAGGCTAAGAAGGCAGCG---GC............2412.0021000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAGGCTAAGAAGGCA....................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAAAGAAGGCTAAGA.........................1911.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGAAGGCTAAGAAGGC.....................2011.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAGGCTAAGAAGGC.....................1911.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGAAGGCTAAGAAG.......................1911.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGCG---GCCGCCGATGGAGA2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCTAAGAAGGCAGCG---GCC...........2211.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCTAAGAAGGCAGCG---..............1911.0010000100
...................................................................TGTACACACGCACG--GC------A-----------AGTT-------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................................................................................................................................................................................................................GATGTGTGGG-----TTTGAGTTGGGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGAATCAAAGAAGGCTAAGAAGGCA....................2811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGAATCAAAGAAGGCTAAGAA........................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAGGCTAAGAAGGCAGC..................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGAAGGCAGCG---GCCGCCGATGGA..2711.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAAGAAGGCTAAGAAG.......................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGCAGCG---GCCGCCGATGGA..2411.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAAGAAGGCTAAGAAGGCAGCG---GC............2811.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAAGAAGGCTAAGAAGGCAGC..................2511.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCAGCG---GCCGCCGATGGAGA2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTAAGAAGGCAGCG---GC............1911.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCAAAGAAGGCT.............................1811.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGCTAAGAAGGCAGCG---GC............2311.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGAAGGCAGCG---GCCGCCGAT.....2311.0010100000
.................................................................................................................................................GTATTG----------GA--------------------------------------TGCCCTTGATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAAGGCTAAGAAGGCAGCG---GC............2511.0010001000
..................................................................................................................................................................................................................................................................................................................................TCTAGCTCTAG-------------AG-----------------CACTAATA-----------------------.......................................................................................................................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGAAGGCAGCG---GCCGCC........2111.0010100000

Generated: 05/18/2015 at 02:04 AM