ID:

dwi_1511

 Coordinate:

scf2_1100000004558:1884190-1884340 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6 -11.5 -11.4

Flybase annnotation

snoRNA [Dwil\snoRNA:GK26558-RA]; exon [Dwil\snoRNA:GK26558:1]; exon [dwil_GLEANR_5325:3]; CDS [Dwil\GK22224-cds]; intron [Dwil\GK22224-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

######---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACGCTCTTCATGGGAATTTCCTCTTGTAAATGAGGACACCCAGAATGGCGATTAAATGGTCAAGCATAGTTTATAATTGATTTATAAATTTAATTTAATACTGTTAAGGTTAAACAACTAAGTAGGATAGTATTTCATTTTAGTATTTTGACCTCGCTTAAGATTTTTACTAACATTATATGAAATATAACTTATTTTAGGCTGGTGGTCTATGGCCCAATTAGCTGCCCAGGACTATTTCAGTCGCCTG
**************************************************((((((((((((((..(((...)))..)))))).....)))))))).(((((((((....(((......)))....)))))))))......************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V118
embryo
 V119
head
 M020
head
..................................................GATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 22 0 1 24.00 24 12 5 4 3 0
..................................................GATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 23 0 1 13.00 13 5 3 4 1 0
...............................................GGCGATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 25 0 1 8.00 8 1 4 2 1 0
.............................................ATGGCGATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 27 0 1 6.00 6 1 1 4 0 0
...............................................GGCGATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 26 0 1 6.00 6 0 5 1 0 0
.................................................CGATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 23 0 1 5.00 5 1 0 0 4 0
.....................................................TAAATGGTCAAGCATAGTT................................................................................................................................................................................... 19 0 1 4.00 4 2 0 1 1 0
.................................................CGATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 24 0 1 4.00 4 0 3 1 0 0
......................................................AAATGGTCAAGCATAGTT................................................................................................................................................................................... 18 0 1 4.00 4 0 0 0 3 1
.......................CTTGTAAATGAGGACACCCAGAAT............................................................................................................................................................................................................ 24 0 1 3.00 3 1 2 0 0 0
..............................ATGAGGACACCCAGAATGGC......................................................................................................................................................................................................... 20 0 1 3.00 3 2 0 1 0 0
.............................................ATGGCGATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 28 0 1 3.00 3 0 3 0 0 0
....................................................TTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 21 0 1 2.00 2 0 0 1 1 0
...................................................ATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 22 0 1 2.00 2 1 0 0 1 0
................................GAGGACACCCAGAATGGC......................................................................................................................................................................................................... 18 0 1 2.00 2 0 1 1 0 0
....................................................TTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 20 0 1 2.00 2 0 1 1 0 0
...................................................ATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 21 0 1 2.00 2 1 0 0 1 0
......................................................AAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 19 0 1 2.00 2 0 1 0 1 0
..............................................TGGCGATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 27 0 1 2.00 2 0 0 2 0 0
............................................AATGGCGATTAAATGGTCAAGC......................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
......................TCTTGTAAATGAGGACACC.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
................................................GCGATTAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
...GCTCTTCATGGGAATTTCCTCT.................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..............................ATGAGGACACCCAGAATGGCG........................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................GCTGCCCAGGACTATTTCA........ 19 0 1 1.00 1 0 0 0 0 1
..................................................................................................................ACAACTAAGTAGGATAGTATTTCATTT.............................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
................................................GCGATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0
..............................................TGGCGATTAAATGGTCAAGCATAGTT................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
......................................ACCCAGAATGGCGATTAAATGGTCAAGC......................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
....................................ACACCCAGAATGGCGATTAAATGGTC............................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0
.................................................CGATTAAATGGTCAAGCATAGT.................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0
..................................................GATTAAATGGTCAAGCATATTTT.................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0
.......................CTTGTAAATGAGGACACCCAGA.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0
..................................................GATTAAATGGTCGAGCATAGTTT.................................................................................................................................................................................. 23 1 1 1.00 1 0 0 1 0 0
...............................TGAGGACACCCAGAATGGCGATTAAAT................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0
...............................................GGCGATTAAATGGTCAAGCA........................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.......................CTTGTAAATGAGGACACCCAGAATGGC......................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................TGAGGACACCCAGAATGG.......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0
..................................................GATTAAAAGGTCAAGCATAGTTT.................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0
..............................ATGAGGACACCCAGAATGGCGAT...................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.......................CTTGTAAATGAGGACACC.................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1
.................................................CGATTAAATGGTCAAACATAGTTT.................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................AATTAGCTGCCCAGGACT.............. 18 0 1 1.00 1 0 0 0 0 1
......................................................AAATGGTCAAGCATAGTC................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 1 0
........................TTGTAAATGAGGACACCCAGAAT............................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
......................TCTTGTAAATGAGGACACCCAGAATGG.......................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................GGCGATTAAATGGTCAAGCATTTTA................................................................................................................................................................................... 25 3 1 1.00 1 0 1 0 0 0
.....................................CACCCAGAATGGCGATTAAATGGT.............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.....................................................TAAATGGTCAAGCATAGTTT.................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0
..................................GGACACCCAGAATGGCGATT..................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
.......................CTTGTAAATGAGGACACCCAGAATGGCG........................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
.....................................CACCCAGAATGGCGATTAAATGGTCAA........................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0
..................................................GATTAAATGGTCAAGCCTAGTT................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
...............................TGAGTACACCCAGAATGG.......................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1
..................................................GATTAAATGGTCAAGCATAGT.................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
...............................................GGCGATTAAATGGTCAAGCATA...................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................ATGTTAGGCTAGTGGGCTA...................................... 19 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

ATGCGAGAAGTACCCTTAAAGGAGAACATTTACTCCTGTGGGTCTTACCGCTAATTTACCAGTTCGTATCAAATATTAACTAAATATTTAAATTAAATTATGACAATTCCAATTTGTTGATTCATCCTATCATAAAGTAAAATCATAAAACTGGAGCGAATTCTAAAAATGATTGTAATATACTTTATATTGAATAAAATCCGACCACCAGATACCGGGTTAATCGACGGGTCCTGATAAAGTCAGCGGAC
**************************************************************************************************************((((((((((((((..(((...)))..)))))).....)))))))).(((((((((....(((......)))....)))))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
......................................................................................................................................................................................................................................GTCCAGATAAAGTGAGGGGA. 20 3 8 0.25 2 2
......................................................................................................................................................................................................................................GTCCAGATAAAGTGAGGGG.. 19 3 13 0.23 3 3
......................................................................................................................................................................................................................................GTCCTGATCAAGTAAGCCG.. 19 3 10 0.10 1 1
...........................................................................................................................................................................................................ACCACCGGATCCCGGCTTA............................. 19 3 17 0.06 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004558:1884140-1884390 + dwi_1511 TACGCTCTTCATGGGAATT--TCCTCTTGTAAATGAGGACACCCAGAATGGCGAT--TAAA--TGGTCAAGCATAGTTTATAATTGA-TTT-AT--------AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTAATACTGTTAAGGTTAAACAACTAAGTAGGA-----------TAGTATTTCATTTT-AGTATTTTGACCTCGCTTAAGATTTTTACTAA-----CATTATA-------TGAAATATAACTTATTTTAGGCTGGTGGTCTATGGCCCAATTAGCTGC---------------------------CCAGGACTATTTCAGTCGCCTG
droVir3 scaffold_12875:12969767-12969860 + TCGTCTGATCTGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAA-----ACTAATG-------CTAAATG---TAATTTGCAGGCTGGTGGTCCATGGCTCAGTTGGCCGC---------------------------ACAGGATTACTTTAGCCGGCTG
droMoj3 scaffold_6496:20234835-20234890 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGGCTGGTGGTCCATGGCTCAGTTGGCAGC---------------------------GCAGGATTATTTCAGTCGCTTG
droGri2 scaffold_15245:7396748-7396856 - CTTAATATTTC------------------------------------------------------------------------TATA----------------------------------------------------------------------------------TGTTTTGTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATAAGCTAA-----TCTGTCG-------TTGT------GCTTTTGCAGGCTGGTGGTCCATGGCTCAACTGGCCGC---------------------------TCAGGACTATTTTAGTCGACTG
dp5 3:4666344-4666530 - TGCGTCCTGCACTGTGCTCTCTTT-CA------------TGGCCAGT---GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TATTTTG----TAGCATAGA-------------------------------------------------TTATTGTGGATGCCTTGCTCTGAATCATCCGATT--------------------------------------------------------------------------------------------------------------GCTGATTCCAT---TTG-------CTTT-------TCGTTGCAGGCTGGTGGTCGATGGCGCAACTGGCGGC---------------------------TCAGGACTACTTTAGTCGGCTG
droPer2 scaffold_2:4854704-4854890 - TGCGTCCTGCACTGTGCTCTCTTC-CA------------TGGCCAGT---GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TATTTTG----TAGCAAAGA-------------------------------------------------TTATTGTGGATGCCTTGCTCTGAATCATCCGATT--------------------------------------------------------------------------------------------------------------GCTGATTCCAT---TTA-------CTTT-------TCGTTGCAGGCTGGTGGTCGATGGCACAACTGGCGGC---------------------------TCAGGACTACTTTAGTCGGCTG
droAna3 scaffold_13266:1193028-1193246 - dan_1712 TACACTGGCCGAGGGACTC--CCC-AT------------GGGTCTGG---TTGGTGAAAAA--CAGTCCAGCACAACTGTTTTTTAG-GTT-CC--T--AA----------------------------------------------------------CTAAAG--GATGTCCTGCGTAAAAAA------------------------------------------------------------------------------------------------------------------------------------------------GACTAATCCT--------GATCC-TTTAGCTTCTTCCTT-TGAAAACCCCTTCTAAT----CTCTCCCT------TGACT-----TACTTTCCAGGCTGGTGGTCGATGGCCCAACTAGCCGC---------------------------CCAGGACTACTTCAGTCGCCTG
droBip1 scf7180000396730:2187218-2187436 - TACACTGGCCACTGGACTC--CAC-AA------------GGGTCGGG---TCGGTGAAAAA--TGGTCCAGCACAAGTATTTTAGGTC----AC--T--AA----------------------------------------------------------CTAATG--------------------------------GAAGGCT--------------------------------------------------------------------------------------------------GTAG-------GACT-------TCAAGGACTAACCCC--------AACCT-TATAGTCAAATCTTTCCAAAAACCCATTCTAA-----CTTGACCT------TGAAT-----CCCTTTCCAGGCTGGTGGTCGATGGCTCAATTGGCCGC---------------------------CCAGGACTACTTCAGTCGCCTG
droKik1 scf7180000302386:408946-409160 + TACACTGCCCAAAAATTAA--TGCACTT-----------GAGCAGGG---GCAGTGAAAAA--TGGTCAAGCATAATTTTTTCTTATT----TA--TTTT-----------TTTGGTTTA-TAA---------------------------------------AG--TATTTTA----TAG----------------GAAAAAT--------------------------------------------------------------------------------------------------ATAT-------AATA-------TTAATATTTAATCACAT-------------------------------------TTTCTAATTAAATTTTCTG-------CTCA------CCCTTTGCAGGCTGGTGGTCCATGGCCCAACTAGCTGC---------------------------CCAGGATTACTTCAGCCGCCTG
droFic1 scf7180000453773:409542-409630 - TACACTGCCCGAAAAGCTT--TAC-CC------------TGAGCAGG---GCAGTGAAAAA--TAGTCAAGCACAATTTTTGTTTCA-TTT-CT----TAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGT-------------------------------------------CTTAGTTTA
droEle1 scf7180000491214:2940892-2940993 - TACACTGCCCAAAATACTT--GTC-CC------------TGAGCAGG---GCAGTGACAAA--TGGTCAAGCACAAATATTTTGCTAT----AT--T------------------------------------------------------------TTCT--TTAATGTT-------TTTCAGAGTAT-----AAGTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779263:66371-66434 + TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTACAGGCTGGTGGTCGATGGCCCAGCTAGCTGC---------------------------CCAGGACTATTTTAGTCGCCTG
droBia1 scf7180000302292:248617-248839 - TACACTGTCCAAAAAGCTC--TTC-CC------------TGGGCAGG---GCAGTGAAAAA--TGGTCAAGTACAAGAGTTTTAGTAT----AG--TTTTGTGTA---------------------------------------------------------------------------------------------------------------------------------------------ATATTTGC-----------GAGTAAATTGAATTATTTGGCAAGTCAATTTAAGAAAGTTATGGAAAAGAATTTAAGTAAAAAGTTCTCTTAAAAATATTTAGTTGA-AGTGTTTTTAAATCTATTA--------------------------------------------------AAAATAGAAGTAAAT------------------------------------------------TAAATTCAACTGG-TT
droTak1 scf7180000415991:775541-775673 - TACACTGCCCAAAACGCTT--TTC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTAGTGT----AA--TTTT-----------TATTGCTTT-TAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA--TTTCTATTACTTAACTTATAAT---------------------------TAAAAAATATAGAAGTCAATTT
droEug1 scf7180000409462:1019619-1019875 + TACACTGACCAAAAGGCTT--ATC-CC------------TGAGCTGG---TCAGTGAAAAA--TGGACAAGCACAAATATTTTAGCGT----AA--TTTTGTATA---------------------------------------------------------------------------------------------------------------------------------------------TTCGTTGAATTAAAATATTGACTA-------------------------------------GATTGATTGCTTTACCAAAT-----------TCGTATTGCCTTATAAGCATTTATAGAGCGCTTTAAACTTCTGAAAT--------TTTG-ATAATAAAGTAATTAATATCTT--------------------CTAGGTAGTCACACTAAACAAATTTGTTTGTCTCCAATTCAAAATTTAATTTAAAAGTTTA
dm3 chr2R:7478630-7478903 - TACACTGGCCACTACGCTT--CAC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTAGTGT----TC--TTTTGTATGTTATATC-TTGTTCTTTAAAAT------------------------AGTATTTCCT--TCGCTCTTATG----CGCCGTAAATTAACTAAAGTTAAAGTATTTATTTGACTCAACTAAGCATTTGCATCCATTTTTGTGAAATCACTGTA------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCGCTG-------CTAAT-----CGATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTG
droSim2 2r:8183172-8183443 - dsi_10542 TACACTGGCCACTACGCTT--TAC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTATTA-GTTTGAACCTTTG-------AATC-TTGTTCTTTAAAAT------------------------AGTATTTCCT--TCGCTCCTATG----TGGCATAAATAAACTAAAGTAAAAGTATTTATTTGACTTTACTATGCATTTGCATCCATTTTTGTAAAATCCCTTTT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCTTTG-------CTAAT-----CGATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTG
droSec2 scaffold_1:5029452-5029722 - TACACTGGCCACTACGCTT--TAC-CC------------ACAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTATTA-GTTTGAACCTTTG-------AATC-TTGTTCTTTAAAAT------------------------AGTATTTCCT--TCTCTCTTATG----TGGCGTAGATTAACTAAAGTAAAAGTATTTATTTGACTTGACTATGCATTTGCATCCATTTTT-TATAATCCCTGAT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCATTG-------CTTAT-----CAATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTG
droYak3 2R:9476412-9476707 + TACACTGGCCACGAAGCTT--CAC-CC------------AGAGCGGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTAGTGT----AC--TTTGACATCTTATATAATTGCTTTTTAACTCAGTACTGATTTGCATCAGCAATGCAATATTTAAT--TTGCTCTT-------TGCCGTAACTTAACTAACGTAAAAGTGTTGAATTGACTTAACTATGCAATAGCATACATATTTGAAAAAATCCGTTT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCGCTG-------CTAAT-----CGATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTG
droEre2 scaffold_4845:18317554-18317609 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TACGCTCTTCATGGGAATT--TCCTCTTGTAAATGAGGACACCCAGAATGGCGAT--TAAA--TGGTCAAGCATAGTTTATAATTGA-TTT-AT--------AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTAATACTGTTAAGGTTAAACAACTAAGTAGGA-----------TAGTATTTCATTTT-AGTATTTTGACCTCGCTTAAGATTTTTACTAA-----CATTATA-------TGAAATATAACTTATTTTAGGCTGGTGGTCTATGGCCCAATTAGCTGC---------------------------CCAGGACTATTTCAGTCGCCTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................GAT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................22124.0024051243
....................................................GAT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................23113.001303541
.................................................GGCGAT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00804121
...............................................ATGGCGAT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2716.00601140
.................................................GGCGAT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00605010
...................................................CGAT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2315.00500104
.........................................................TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00400211
...................................................CGAT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00403010
..........................................................AAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00410003
.........................CTTGTAAATGAGGACACCCAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00302100
................................ATGAGGACACCCAGAATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300210
...............................................ATGGCGAT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00303000
......................................................T--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200011
.....................................................AT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200101
..................................GAGGACACCCAGAATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00201010
......................................................T--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201010
.....................................................AT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200101
..........................................................AAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201001
................................................TGGCGAT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200020
..............................................AATGGCGAT--TAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................TCTTGTAAATGAGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..................................................GCGAT--TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...GCTCTTCATGGGAATT--TCCTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
................................ATGAGGACACCCAGAATGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGC---------------------------CCAGGACTATTTCA........1911.00110000
.........................................................................................................................................................................................................................................................................................................................ACAACTAAGTAGGA-----------TAGTATTTCATTT......................................................................................................................................................2711.00101000
..................................................GCGAT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
................................................TGGCGAT--TAAA--TGGTCAAGCATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
........................................ACCCAGAATGGCGAT--TAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
......................................ACACCCAGAATGGCGAT--TAAA--TGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...................................................CGAT--TAAA--TGGTCAAGCATAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
.........................CTTGTAAATGAGGACACCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................TGAGGACACCCAGAATGGCGAT--TAAA--T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.................................................GGCGAT--TAAA--TGGTCAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.........................CTTGTAAATGAGGACACCCAGAATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.................................TGAGGACACCCAGAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
................................ATGAGGACACCCAGAATGGCGAT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........................CTTGTAAATGAGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAGCTGC---------------------------CCAGGACT..............1811.00110000
..........................................................AAA--TGGTCAAGCATAGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
..........................TTGTAAATGAGGACACCCAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........................TCTTGTAAATGAGGACACCCAGAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.......................................CACCCAGAATGGCGAT--TAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.........................................................TAAA--TGGTCAAGCATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................................GGACACCCAGAATGGCGAT--T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................CTTGTAAATGAGGACACCCAGAATGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.......................................CACCCAGAATGGCGAT--TAAA--TGGTCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....................................................GAT--TAAA--TGGTCAAGCATAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.................................................GGCGAT--TAAA--TGGTCAAGCATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
droVir3
TCGTCTGATCTGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAA-----ACTAATG-------CTAAATG---TAATTTGCAGGCTGGTGGTCCATGGCTCAGTTGGCCGC---------------------------ACAGGATTACTTTAGCCGGCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCATGGCTCAGTTGGC....................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGGCTGGTGGTCCATGGCTCAGTTGGCAGC---------------------------GCAGGATTATTTCAGTCGCTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTTAATATTTC------------------------------------------------------------------------TATA----------------------------------------------------------------------------------TGTTTTGTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATAAGCTAA-----TCTGTCG-------TTGT------GCTTTTGCAGGCTGGTGGTCCATGGCTCAACTGGCCGC---------------------------TCAGGACTATTTTAGTCGACTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TGCGTCCTGCACTGTGCTCTCTTT-CA------------TGGCCAGT---GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TATTTTG----TAGCATAGA-------------------------------------------------TTATTGTGGATGCCTTGCTCTGAATCATCCGATT--------------------------------------------------------------------------------------------------------------GCTGATTCCAT---TTG-------CTTT-------TCGTTGCAGGCTGGTGGTCGATGGCGCAACTGGCGGC---------------------------TCAGGACTACTTTAGTCGGCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................CGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2015.0050000005000
......................................................TGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2414.0040000112000
..................................................GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2813.0030001000002
...........................................................GGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................1913.0030100020000
............................................................GCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................1812.0020000020000
.........................................................GCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2112.0020100010000
........................................................GGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2212.0020100010000
..CGTCCTGCACTGTGCTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
.....................................................GTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2512.0020000002000
..........................A------------TGGCCAGT---GCGGTGGGCGGCAGGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGCAACTGGCGGC---------------------------TCA...................2111.0010100000000
..............................................T---GCGGTGGGCGGCAGGGTTAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................GGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2611.0010000001000
TGCGTCCTGCACTGTGCTCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..............................................T---GCGGTGGGCGGCAGGGTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................CGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2711.0010000001000
.............................................GT---GCGGTGGGCGGCAGGGTTAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.....................................................GTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TAT...........................................................................................................................................................................................................................................................................................................................................2611.0010000100000
..................................................GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................T---GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2911.0010000001000
droPer2
TGCGTCCTGCACTGTGCTCTCTTC-CA------------TGGCCAGT---GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TATTTTG----TAGCAAAGA-------------------------------------------------TTATTGTGGATGCCTTGCTCTGAATCATCCGATT--------------------------------------------------------------------------------------------------------------GCTGATTCCAT---TTA-------CTTT-------TCGTTGCAGGCTGGTGGTCGATGGCACAACTGGCGGC---------------------------TCAGGACTACTTTAGTCGGCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................CGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2017.007000511
............................................................GCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................1813.003000120
...................................................CGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2712.002200000
.............................................GT---GCGGTGGGCGGCAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
.............................................GT---GCGGTGGGCGGCAGGGTTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.....................................................GTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2512.002100001
.........................................................GCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2112.002000200
...........................................................GGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................1912.002000200
........................................................GGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2212.002000200
...................................................CGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................2512.002200000
.............................................GT---GCGGTGGGCGGCAGGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
.....................TTC-CA------------TGGCCAGT---GCGGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCGATGGCACAACTGG.....................................................1911.001010000
...GTCCTGCACTGTGCTCTCTTC-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................................................GGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2311.001000100
.............................................GT---GCGGTGGGCGGCAGGGTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................AGT---GCGGTGGGCGGCAGGGTTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................GGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2611.001010000
......................................................TGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2411.001000100
..............................................................AGGGTTAGACACAC-------------------------------------------------------------------------------------------TATTTTG----T..................................................................................................................................................................................................................................................................................................................................2211.001000100
........................................GGCCAGT---GCGGTGGGCGGCAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..................................................GCGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................2811.001100000
...................................................CGGTGGGCGGCAGGGTTAGACACAC-------------------------------------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................2611.001000001
.......................................TGGCCAGT---GCGGTGGGCGGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................C-CA------------TGGCCAGT---GCGGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
droAna3
TACACTGGCCGAGGGACTC--CCC-AT------------GGGTCTGG---TTGGTGAAAAA--CAGTCCAGCACAACTGTTTTTTAG-GTT-CC--T--AA----------------------------------------------------------CTAAAG--GATGTCCTGCGTAAAAAA------------------------------------------------------------------------------------------------------------------------------------------------GACTAATCCT--------GATCC-TTTAGCTTCTTCCTT-TGAAAACCCCTTCTAAT----CTCTCCCT------TGACT-----TACTTTCCAGGCTGGTGGTCGATGGCCCAACTAGCCGC---------------------------CCAGGACTACTTCAGTCGCCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................AAAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................20116.00160000016
......................................................TGAAAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................22114.00140000014
.......................................................GAAAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................21112.00120000012
...................................................TGGTGAAAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................25111.0011500006
.........................................................AAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1919.009000009
......................................................TGAAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2318.008000008
...................................................TGGTGAAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2616.006201003
..................................................TTGGTGAAAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2615.005000005
..................................................TTGGTGAAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004101002
...............ACTC--CCC-AT------------GGGTCTGG---TTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
.......................................................GAAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003010002
........................................................AAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003100002
.........................................................AAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
.....................................................GTGAAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000002
................CTC--CCC-AT------------GGGTCTGG---TTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100010
..................................................TTGGTGAAAAA--CAGTCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
......................................................TGAAAAA--CAGTCCAGCACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
..............................................G---TTGGTGAAAAA--CAGTCCAGCACAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGATGGCCCAACTAGCC...................................................2011.001010000
.....................CCC-AT------------GGGTCTGG---TTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.........................................................AAAA--CAGTCCAGCACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..................................................TTGGTGAAAAA--CAGTCCAGCACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..................................................TTGGTGAAAAA--CAGTCCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................GAAAAA--CAGTCCAGCACAACTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................TTGGTGAAAAA--CAGTCCAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................CTC--CCC-AT------------GGGTCTGG---TTGGTGAAAAA--......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
....................................................GGTGAAAAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..............GACTC--CCC-AT------------GGGTCTGG---TTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................TTGGTGAAAAA--CAGTCCAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...................................................TGGTGAAAAA--CAGTCCAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............GACTC--CCC-AT------------GGGTCTGG---TTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................AAA--CAGTCCAGCACAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
................CTC--CCC-AT------------GGGTCTGG---TTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................TTGGTGAAAAA--CAGTCCAGCACTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000001
droBip1
TACACTGGCCACTGGACTC--CAC-AA------------GGGTCGGG---TCGGTGAAAAA--TGGTCCAGCACAAGTATTTTAGGTC----AC--T--AA----------------------------------------------------------CTAATG--------------------------------GAAGGCT--------------------------------------------------------------------------------------------------GTAG-------GACT-------TCAAGGACTAACCCC--------AACCT-TATAGTCAAATCTTTCCAAAAACCCATTCTAA-----CTTGACCT------TGAAT-----CCCTTTCCAGGCTGGTGGTCGATGGCTCAATTGGCCGC---------------------------CCAGGACTACTTCAGTCGCCTGSizeHit CountTotal NormTotal
No Reads
droKik1
TACACTGCCCAAAAATTAA--TGCACTT-----------GAGCAGGG---GCAGTGAAAAA--TGGTCAAGCATAATTTTTTCTTATT----TA--TTTT-----------TTTGGTTTA-TAA---------------------------------------AG--TATTTTA----TAG----------------GAAAAAT--------------------------------------------------------------------------------------------------ATAT-------AATA-------TTAATATTTAATCACAT-------------------------------------TTTCTAATTAAATTTTCTG-------CTCA------CCCTTTGCAGGCTGGTGGTCCATGGCCCAACTAGCTGC---------------------------CCAGGATTACTTCAGCCGCCTGSizeHit CountTotal NormTotal
No Reads
droFic1
TACACTGCCCGAAAAGCTT--TAC-CC------------TGAGCAGG---GCAGTGAAAAA--TAGTCAAGCACAATTTTTGTTTCA-TTT-CT----TAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGT-------------------------------------------CTTAGTTTASizeHit CountTotal NormTotal
No Reads
droEle1
TACACTGCCCAAAATACTT--GTC-CC------------TGAGCAGG---GCAGTGACAAA--TGGTCAAGCACAAATATTTTGCTAT----AT--T------------------------------------------------------------TTCT--TTAATGTT-------TTTCAGAGTAT-----AAGTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTACAGGCTGGTGGTCGATGGCCCAGCTAGCTGC---------------------------CCAGGACTATTTTAGTCGCCTGSizeHit CountTotal NormTotal
No Reads
droBia1
TACACTGTCCAAAAAGCTC--TTC-CC------------TGGGCAGG---GCAGTGAAAAA--TGGTCAAGTACAAGAGTTTTAGTAT----AG--TTTTGTGTA---------------------------------------------------------------------------------------------------------------------------------------------ATATTTGC-----------GAGTAAATTGAATTATTTGGCAAGTCAATTTAAGAAAGTTATGGAAAAGAATTTAAGTAAAAAGTTCTCTTAAAAATATTTAGTTGA-AGTGTTTTTAAATCTATTA--------------------------------------------------AAAATAGAAGTAAAT------------------------------------------------TAAATTCAACTGG-TTSizeHit CountTotal NormTotal
No Reads
droTak1
TACACTGCCCAAAACGCTT--TTC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTAGTGT----AA--TTTT-----------TATTGCTTT-TAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA--TTTCTATTACTTAACTTATAAT---------------------------TAAAAAATATAGAAGTCAATTTSizeHit CountTotal NormTotal
No Reads
droEug1
TACACTGACCAAAAGGCTT--ATC-CC------------TGAGCTGG---TCAGTGAAAAA--TGGACAAGCACAAATATTTTAGCGT----AA--TTTTGTATA---------------------------------------------------------------------------------------------------------------------------------------------TTCGTTGAATTAAAATATTGACTA-------------------------------------GATTGATTGCTTTACCAAAT-----------TCGTATTGCCTTATAAGCATTTATAGAGCGCTTTAAACTTCTGAAAT--------TTTG-ATAATAAAGTAATTAATATCTT--------------------CTAGGTAGTCACACTAAACAAATTTGTTTGTCTCCAATTCAAAATTTAATTTAAAAGTTTASizeHit CountTotal NormTotal
No Reads
dm3
TACACTGGCCACTACGCTT--CAC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTAGTGT----TC--TTTTGTATGTTATATC-TTGTTCTTTAAAAT------------------------AGTATTTCCT--TCGCTCTTATG----CGCCGTAAATTAACTAAAGTTAAAGTATTTATTTGACTCAACTAAGCATTTGCATCCATTTTTGTGAAATCACTGTA------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCGCTG-------CTAAT-----CGATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................CAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................251316.003160000000000000000000000020000000000000001010004001002000000000000000000000000000000000001141110015132722200101487272401300000000000001000002000000000010000000000000000000010020000000000000000020010001000000002000000000000103101202603300000002000000000000010000000100000500013000000000010000100201100012002102914020010000000100000002022010
..................................................GCAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................261265.00265000000000000000000000000000000000000000000000000000001000000000000000000000000000000000291001190101011000001431028040010000000000000000000010000000000000000000000000000000000000100000000000000000000000000000100000000000000000300000000000000000010000000000000000000001000180000000000000100000002000000000260102000000000000000000002000
...................................................CAGTGAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................24186.00860000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000400011000000030602000100000000000000000000000000000000001000200000000000000000000000050000000100000020100000000000000000020003010300300000000000001000000000000000000000410002000000000000000000000501200000080201101000000022010000107000
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.............................................................................................................................................................................................................................................................................................................................................................................................CTAA-----CTCGCTG-------CTAAT-----CGA....................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CAGTGAAAAA--TGGTCAAGCACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................AC-CC------------AGAGCAGG---GCAGTGAAAAA--T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGCCCAGTTAGCTGC---------------------------CCAG..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
TACACTGGCCACTACGCTT--CAC-CC------------AGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAC-CC------------AGAGCAGG---GCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAGG---GCAGTGAAAAA--TGGTCAAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGC---------------------------CCAGGATTACTTCAGTCGC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................TGGTCAAGCACAAATATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACGCTT--CAC-CC------------AGAGCAGG---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................CTT--CAC-CC------------AGAGCAGG---GCAGTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGCCACTACGCTT--CAC-CC------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AC-CC------------AGAGCAGG---GCAGTGAAAAA--TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................A--TGGTCAAGCACAAATATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................AAAA--TGGTCAAGCACAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................G---GCAGTGAAAAA--TGGTCAAGCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........ACTACGCTT--CAC-CC------------AGAGCAGG---GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...ACTGGCCACTACGCTT--CAC-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CACTACGCTT--CAC-CC------------AGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
......................AC-CC------------AGAGCAGG---GCAGTGAAAAA--TT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................AGG---GCAGTGAAAAA--TGGTCAAGCACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ATTTTTGTGAAATCACTGTA------------------------------------------------------------------------------------------------------------------------------CTA.....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.........................................AGCAGG---GCAGTGAAAAA--TGGTCAAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AGTGAAAAA--TGGTCAAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACACTGGCCACTACGCTT--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GAGCAGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CACTACGCTT--CAC-CC------------AGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................T--CAC-CC------------AGAGCAGG---GCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTACGCTT--CAC-CC------------AGAGCAGG---GCAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................AGAGCAGG---GCAGTGAAAAA--T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAGG---GCAGTGAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AGTGAAAAA--TGGTCAAGCACAAATATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TT--CAC-CC------------AGAGCAGG---GCAGTGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................TGGTCAAGCACAAATATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCAGG---GCAGTGAAAAA--TGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................CAGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................GAGCAGG---GCAGTGAAAAA--TGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TACACTGGCCACTACGCTT--TAC-CC------------AGAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTATTA-GTTTGAACCTTTG-------AATC-TTGTTCTTTAAAAT------------------------AGTATTTCCT--TCGCTCCTATG----TGGCATAAATAAACTAAAGTAAAAGTATTTATTTGACTTTACTATGCATTTGCATCCATTTTTGTAAAATCCCTTTT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCTTTG-------CTAAT-----CGATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................CAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00800020200001300000
.......................................................GAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400010100000101000
...................................................CAGTGAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200011000000000000
.......................................................GAAAAA--TGGTCAAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020000000000000
.........................................................AAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.........CACTACGCTT--TAC-CC------------AGAGCAGG---GCAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000000100000
..........ACTACGCTT--TAC-CC------------AGAGCAGG---GCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..........................................GCAGG---GCAGTGAAAAA--TGGTCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......................................................TGAAAAA--TGGTCAAGCACAAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
........CCACTACGCTT--TAC-CC------------AGAGCAGG---GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
......GGCCACTACGCTT--TAC-CC------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.....................................................GTGAAAAA--TGGTCAAGCACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.......................................AGAGCAGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..........................................................AAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
......GGCCACTACGCTT--TAC-CC------------AGAGCAGG---G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................GAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..........................................GCAGG---GCAGTGAAAAA--TGGTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...........................................................AA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.....................................................GTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...........CTACGCTT--TAC-CC------------AGAGCAGG---G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...............................................................TGGTCAAGCACAAATATTTTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................T--TAC-CC------------AGAGCAGG---GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.........CACTACGCTT--TAC-CC------------AGAGCAGG---GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...................................................CAGTGAAAAA--TGGTCAAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
........CCACTACGCTT--TAC-CC------------AGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
....................................................AGTGAAAAA--TGGTCAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
........................................GAGCAGG---GCAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
......................................................TGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
................................................................................................................................................................................................TAAAGTAAAAGTATT......................................................................................................................................................................................................................................................................................................15110.73800000017000000000
droSec2
TACACTGGCCACTACGCTT--TAC-CC------------ACAGCAGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTATTA-GTTTGAACCTTTG-------AATC-TTGTTCTTTAAAAT------------------------AGTATTTCCT--TCTCTCTTATG----TGGCGTAGATTAACTAAAGTAAAAGTATTTATTTGACTTGACTATGCATTTGCATCCATTTTT-TATAATCCCTGAT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCATTG-------CTTAT-----CAATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................CAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................25116.001612103
......................................................TGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2218.0082051
.........................................................AAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1918.0080080
..........................................................AAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1817.0070061
........................................................AAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2016.0060231
.......................................................GAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050311
.........................................AGCAGG---GCAGTGAAAAA--TGGTCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0031110
.........................................AGCAGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030210
.........................................AGCAGG---GCAGTGAAAAA--TGGTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020110
.....................................................GTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020020
...................................................CAGTGAAAAA--TGGTCAAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.........................................AGCAGG---GCAGTGAAAAA--TGGTCAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
......................................................TGAAAAA--TGGTCAAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................AGTGAAAAA--TGGTCAAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
............TACGCTT--TAC-CC------------ACAGCAGG---GCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
..........................C------------ACAGCAGG---GCAGTGAAAAA--T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..........................C------------ACAGCAGG---GCAGTGAAAAA--TGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..........................................GCAGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
.........................CC------------ACAGCAGG---GCAGTGAAAAA--......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................AGCAGG---GCAGTGAAAAA--TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
......GGCCACTACGCTT--TAC-CC------------ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................AGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..........ACTACGCTT--TAC-CC------------ACAGCAGG---GCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
........CCACTACGCTT--TAC-CC------------ACAGCAGG---GCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
.........................................AGCAGG---GCAGTGAAAAA--TGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............TACGCTT--TAC-CC------------ACAGCAGG---GCAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.......................................ACAGCAGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........CTACGCTT--TAC-CC------------ACAGCAGG---GCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........................................................................................................................................................................................................................................................CCTGAT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCATTG-------CTTAT-----CA.....................................................................................2411.0011000
..................................................GCAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
................CTT--TAC-CC------------ACAGCAGG---GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
..................................................GCAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......................................ACAGCAGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
.........................................................AAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........................................GCAGG---GCAGTGAAAAA--TGGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
..........................C------------ACAGCAGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................................AGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
droYak3
TACACTGGCCACGAAGCTT--CAC-CC------------AGAGCGGG---GCAGTGAAAAA--TGGTCAAGCACAAATATTTTAGTGT----AC--TTTGACATCTTATATAATTGCTTTTTAACTCAGTACTGATTTGCATCAGCAATGCAATATTTAAT--TTGCTCTT-------TGCCGTAACTTAACTAACGTAAAAGTGTTGAATTGACTTAACTATGCAATAGCATACATATTTGAAAAAATCCGTTT------------------------------------------------------------------------------------------------------------------------------CTAA-----CTCGCTG-------CTAAT-----CGATTTACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................CAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2519.00914100030000
.......................................................GAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00502000030000
..........................................GCGGG---GCAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00301000020000
.......................................AGAGCGGG---GCAGTGAAAAA--TGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000030000
......................................................TGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300000030000
...................................................CAGTGAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201000010000
..................................................GCAGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201010000000
....................................................AGTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
...................................................CAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........ACGAAGCTT--CAC-CC------------AGAGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............GAAGCTT--CAC-CC------------AGAGCGGG---GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.........................CC------------AGAGCGGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
........................................GAGCGGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........CGAAGCTT--CAC-CC------------AGAGCGGG---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................GTGAAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........CCACGAAGCTT--CAC-CC------------AGAGCGGG---GCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..................................................GCAGTGAAAAA--TGGTCAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................................AGAGCGGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................................GAGCGGG---GCAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...........CGAAGCTT--CAC-CC------------AGAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
........CCACGAAGCTT--CAC-CC------------AGAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000
..........................C------------AGAGCGGG---GCAGTGAAAAA--TGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.........................................AGCGGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................GCGGG---GCAGTGAAAAA--TGGTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
TACACTGGCCACGAAGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
............................................GGG---GCAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...ACTGGCCACGAAGCTT--CAC-CC------------AGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..................................................GCAGTGAAAAA--TGGTCAAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................................AGAGCGGG---GCAGTGAAAAA--TGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.........................................AGCGGG---GCAGTGAAAAA--TGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
............................................GGG---GCAGTGAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.....................................................GTGAAAAA--TGGTCAAGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................................................AAAAA--TGGTCAAGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
....................................................AGTGAAAAA--TGGTCAAGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEre2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGGCTGGTGGTCAATGGCCCAGTTAGCTGC---------------------------CCAGGATTACTTCAGTCGCCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 01:43 AM