ID:

dwi_1502

 Coordinate:

scf2_1100000004558:1632930-1633216 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dwil\GK22217-cds]; exon [dwil_GLEANR_5318:3]; exon [dwil_GLEANR_5318:4]; CDS [Dwil\GK22217-cds]; intron [Dwil\GK22217-in]

Repeatable elements

NameClassFamilyStrand
(CAAAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGCCACATTGGGCATACAGGATACACAAGGCTGGAACGAGGTTCATCAGGTGAGTTGGTGACGGTCCATCAAAAGGGATCTTGGCTTTAGATAGAACCATTTGTCCCATAGAATTTAGATTAACTGGTGTTGGCTCTTTTTATGGCCACCAAAGAAAAGAAAACCAAATGAAATTGCTAATTTTGAATCTACTCTCTCTCTCTCTTTTTCTTTCTTTCTCCGAACTATTGAACTATTTCTATCTAACCTTGTCTAAAACCAAACAAAACAAAACAAAAAACAAAACGCTTTTTAACCAACTCTATAAACTGGGTCTATTGGGCTCTCTGGCTCCAGGCCTGTCGTCATGGCCTGGTTCAGCATCTGGAACACTTGTTGTTCTACGG
**************************************************..((((((((...(((((........)))))((((.(((((((((........((...((((((..(((.((((.((((..(((((........)))))..(((((((.(((((..........................................))))))))))))......)))))))).))).))))))...)).))))))))).))))................................))))))))......(((((((.............))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V118
embryo
 V117
male body
..........................CAAGGCTGGAACGAGGTTCATCAG................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
..............ATACAGGATACACAAGGCT.................................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1
..............ATACAGGATACACAAGGCTG................................................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................................................................................................................................................................TGTCGTCATGGCCTGGTT............................. 18 0 1 1.00 1 0 1 0 0
..........................CAAGGCTGGAACGAGGTTCATCAGGC............................................................................................................................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0
...................GGATACACAAGGCTGGAAC............................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
......CATTGGGCATACAGGATACACAAGGCT.................................................................................................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................ATGGCCTGGTTCAGCATCTGGA.................. 22 0 1 1.00 1 0 1 0 0
..................AGGATACACAAGGCTGGAACGAGGTTC...................................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1
...........GGCATACAGGATACACAAGGCTGG................................................................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0
.........................ACAAGGCTGGAACGAGGTTCATCAGGC............................................................................................................................................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................................................................................................................ACTGGGTCTATTGGGCTT............................................................. 18 1 2 0.50 1 0 1 0 0
.....................................................AATTGGTGACGGTCCAACAG.......................................................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0
.....................................................................................................................................................................................................................................TGAACTACTTTTATCTGACC.......................................................................................................................................... 20 3 9 0.11 1 0 1 0 0
.........................................................................................................................................................................................................................................................................................................................................GGCTCAAGGCCTGTCGTTG....................................... 19 3 15 0.07 1 1 0 0 0
.................................................GGTGCGCTTGTGACGGTC................................................................................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 1 0 0 0
......................................................................CACAAGGGAGCTTGGCTG........................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0
....................................ACGATGCTCTTCAGGTGAG............................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

TACGGTGTAACCCGTATGTCCTATGTGTTCCGACCTTGCTCCAAGTAGTCCACTCAACCACTGCCAGGTAGTTTTCCCTAGAACCGAAATCTATCTTGGTAAACAGGGTATCTTAAATCTAATTGACCACAACCGAGAAAAATACCGGTGGTTTCTTTTCTTTTGGTTTACTTTAACGATTAAAACTTAGATGAGAGAGAGAGAGAAAAAGAAAGAAAGAGGCTTGATAACTTGATAAAGATAGATTGGAACAGATTTTGGTTTGTTTTGTTTTGTTTTTTGTTTTGCGAAAAATTGGTTGAGATATTTGACCCAGATAACCCGAGAGACCGAGGTCCGGACAGCAGTACCGGACCAAGTCGTAGACCTTGTGAACAACAAGATGCC
**************************************************..((((((((...(((((........)))))((((.(((((((((........((...((((((..(((.((((.((((..(((((........)))))..(((((((.(((((..........................................))))))))))))......)))))))).))).))))))...)).))))))))).))))................................))))))))......(((((((.............))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V119
head
......................................................................................................................................................................................................................................................................................................................................................AGCAGTACGCGACCAAGTCCTA....................... 22 3 1 1.00 1 1 0 0
....................................................................................................................................................................................................................................................................................................................................AGTGACCGAGGTGCGGAC............................................. 18 2 2 0.50 1 1 0 0
........................................................................................................................................................................................................................................................................................................................................TCCGAGTTCCGGACAGCA......................................... 18 2 2 0.50 1 0 1 0
..........................................................................................................................................................................................................................................................................................................................................AGAGTTCTGGACAGCAGT....................................... 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004558:1632880-1633266 + dwi_1502 ATGCCACATTGGGCATACAGGATACACAAGGCTGGAACGAGGTTCATCAGGTGAGTTGGTGACGG-TCCATCAAAA---------------------------------------GGGATCTT-GG---------------C---------------------------TT-TA--GATAGAAC----C--ATTTGTCCCATAG------------A-A-TT--------------------TAGATTAAC----------------------TGGTGT---------------------TGGCTCTTTTTATGGCCACCA-AAGAAAAGAAAACCAAATGAAATTGCTAATT-----TTGAATC---TACTCTCTCTCTCTCTTTTTCT-------TTCT-----------TTCTCCGAACTATT-GAACTATTTCTATCTAACCTTGTCTAAAACCAAA-----------CA----------A------------------------------AACA-AAACA-----AA-----AAACAA-----------AACGCTTTTTAACCAACT-CTATAAACTGGG--------T---------------------C----T---------ATTGGGCTCTCTGGCTC-----------------------------------------------------------------------------------------------------CAGGCCTGTCGTCATGGCCTGGTTCAGCATCTGGAACACTTGTTGTTCTACGG
droVir3 scaffold_12875:1960436-1960746 + dvi_4958 ACGCCACGCTGGGCATACAGGACAGCCAGGGCTGGAACGAGGTGCATCAGGTAAGTCGGTGACGG-TCCAGATAG-CT--TTACGACTTCTATTTATTGATATATATTTTTTTT----------GGTT---------CTTGT----GAAAGC----CCCCGCTCC----CTATCCA-------------------------------AATTGAGAGAAA-CT--------------------TTGGTGC------------------------TGGTGC---------------------TGGGAA-------------------AGATATA----AAATTTGTTTGCTAATTG-------ATTT-------TT---------------------ACTT------C-------------------------TCTTC-TGTCTAACTTT----AAA------CGCTTGC----------------------------------------------------------------------------------------------CTAAC--TAT-TGTTAAACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------TGCT---CAGGCCTGTCGGCATGGCCTGGTGCAGCACTTGGAACACTTGTTGTTCTACGG
droMoj3 scaffold_6496:23303427-23303742 - ACGCCACGTTGGGCATACAGGACAGCCAGGGCTGGAACGAGGTGCACCAGGTAAGTCGGTGACGGGTCCAAATGG-TTGCTAACATCTTCTCTATA-CGACTGAGCTCACTCTT----------GGTT---------CTTGT----GAATGA----CCCCGCTGC----CTATCCA------------------------------AAATTGAGAGA-A-CT--------------------TTGGTGCGA----------------------AGGTGC---------------------TGGGAC-------------------AGTTAAG----AAACGTATTTGCTAA-------TTGATTT-------TT---------------------ACTT------C-------------------------TCTTC-TGTCTAACTTT----AAA------CGCTTGCC---------------------------------------------------------------------------------------------CTAAC--TAT-TGTTAAACTGTG------A--------------------------------------------------------------------------------------------------------------------------------------------------------T---TAGGCCTGTCGGCACGGCCTAGTGCAGCACTTGGAGCACTTGTTGTTCTACGG
droGri2 scaffold_15112:4067047-4067458 + ATGCCACGTTGGGCATACAGGACAGCCAGGGCTGGAATGAAGTGCATCAGGTAAGTCGGTGACGG-TCCAAATTGAT----------------------------------ATAGA-ACTAT----ATTTTCTGGTACTTGC----AATAGCTGCCCTCCGCTCC----CCTCCCAAAGATCCTATCCCAAAATAAAACA------AAAGAGAGAGAAT-CT--------------------CTGGTGAAG----------------------GGATGTTTTTGTTATTCAATTTAATTTTGGCTT-------------GA--GAGATTGAG----A-AT---TTCGCTAATTGATTTTTATATTTATGACTCTTTCTCTCTATCTCTCTCTCTG-------TCTC-------------------------TGCTC-TGGCTAACTTT----TAAA---AACGCTTGCCTAACTATTCAATTAAACA------------------------------ATG------------------GGGAT-----GAT-GAT----------------------------------------------------------------------------------------------------------------------------------------------------------GATGATGA--------TGAT----------TATGAG---CAGGCGTGTCGTCACGGCCTGGTGCAGCACTTGGAACACTTGTTGTTCTACGG
dp5 3:2668097-2668545 - ACGCGACGCTCGGTATCCAGGATAGCCAGGGCTGGAACGAGGTCCATCAGGTCAGTCGGTGGCGG-TCCTTT--GAA----------------------------------AACGCCAGTCCC-GT---------------AGACT-------------------CCCAGATTCGTAACTGCCA----ATGCTTATCCCCCTCGTC---------GAAT-CT--------------------CTGGTGAAGCCCCCGCCCGCAGTCCCCCAGCCGGTGTCT--G----------TACCCCTGCCCC-------------CA-AAGTGTTGAAT-------------GCCAATTAATATTTGAATT-------CTCTCTC----T------------TTACTTTCTC-------------------------TCCTC-TCTCTAACTCT----AAAA---AA-----------CA----------A------------------------------ACACAAA-CA-----CA---------AA-----AACAAA--CGCTTTCTAAC--TCTTTTGTAACCCGCG------GGTTG-TA-TCTGTATCTGCATCTGTATCTGCAACTGTATCTGCATCCTTCCGCCCTGTT-CA------------ATCTGCAATCCGCAATCCGCA---------ATGAG-------------------------------------------A---CAGGCCTGTCGGCACGGCCTGGTTCAGCACTTGGAACACCTCCTGTTCTACGG
droAna3 scaffold_13266:5942252-5942690 + ATGCCACACTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTGCATCAGGTAGGTCGGTGGCGG-TCCTTGAGG--------------------------------------TGGTCCTCCT-G----------------------TATGC-----------------CTCCCGTAACAGAAA----CTGCTTTGTCCCCGAGCC----------AGT-TCCCTCCTCCTCCTCCTCCCCCCTGGTGAAA----------------------TGGT----------------------------------------------------GAAA-------------GCCAATTAATGATTCAATT-------CTCTATT----TCTCTCTCTCTT-------TCTCGTTTCTTACT---------T-AAACTTAAA-CATCTAACTCTTA---AAACA-A------------------------AAA----------------------------ATCCAAA------------AATACACAA-----AACAAATACGCTTGCTAAT--AAT-ATGTAACCCGCG------GGTTGGCATCTT------GCAA------------------CTGCATCCTTTGGCTCT--A-CGCTCT----------CCACCACCCGAAACCGAAA---------CTGAAACCGAAACCA---------CCATCCGAT--------T-G---TG---TAGGCCTGTCGGCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droBip1 scf7180000395839:100834-101208 + ATGCCACACTGGGCATCCAGGACAGTCAGGGCTGGAACGAGGTGCATCAGGTAAGTCGGTGGCGG-TCCTTGA-GG-------------------------------------------TCCT-TG---------------C----------------------------TCCTGTAACAGAAA----CTGCTTTGTCCCCGAGCC----------AGTTCC--------------------CCGGTGAAA----------------------TG---------------------------------------------------------------------------ATTAATGATTGAATT-------CTCTATT----TCTCTCTCTCTT-------TCTCGTTTCTTACT---------CAAAACTTTTATAATCTAACTTTTA---AAACA-A------------------------AAA------------------------------ATA------------------AATAA-----AAT-GATATGCTTGCTAAT--AATAATGTAACCCGCG------GGTTGGCAACTT------GCAA------------------CTGCATCCTTTGGCTCT--A-CGCTCTTTGGCTCC-ACCCCGA-----------------------------------------------CACCCGAC-----------ACCCG---TAGGCCTGTCGGCATGGCCTCGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droKik1 scf7180000302385:83807-84191 - ATGCCACACTGGGCATCCAGGATAGTCAGGGCTGGAACGAGGTGCATCAGGTGAGTCGGTGACGG-TCCTTGAAG--------------------------------------------CCAG------------------T-----------GAAACCCGGTCT----GATTCCTAACAGCAAAACCCAGCTTTGAACCCAAGCC----AAAACCAAT-TC--------------------CCGGTGATT----------------------T------------------------------------------------------------------------GCCAATTACTGATTGA-TT-------CTCT----------C----TCTCTCTTCT-----------TTCT---------T-TAACTTCTC-TTTCTAACTCT----AAAA---AATAT--------CA----------A------A-----------------------AACAAAAACA-----AA-----AAACCA-----AAAAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GTTTG----------------TGGC----T---------GCTGCATCCTTTGGCTACCTC-CGTTA--------CGT-CGTGA-----------------------------------------------TTCCCGAT--------T---CCGGTATCAGGCCTGTCGGCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droFic1 scf7180000453948:452611-453028 + ACGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCAGGTGAGTCGGTGGCGG-TCCTTCTCCA-------------------------------------------ACAT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGACCCCGCGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTCAATT-------CTCT----------C----TCTCTCTTCT-----------TTCT---------T-GAACTTTTCTTTTCTAACTCT----TAAA---AA-----------CA----------A------------------------------AAACAAAACA-----AA-----AAACAA-----AACCAAATCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TTT------GCATCTC----T---------GCTGCATCCTTTGGCTGTCTC-CA------------AACTCCGATCTCCGATCTCCGATCTCCGATC-----------------------TGATTCGAT--------CTGATCCG---TAGGCCTGTCGGCACGGCCTGGTGCAGCACCTGGAACACCTGCTGTTCTACGG
droEle1 scf7180000491201:13318-13760 - ATGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTCCACCAGGTGAGTCGGTGACGG-TCCTTGG----------------------------------------------CGCT-CG---------------C---------------------------GATCCTTAACAGCAA----CCGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AAAAACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTCTC----TCTCTCTCTCTCTCTCCT-----------TTCT---------T-GAACTCTTCTTTTCTAACTCTAT---AAACA-A------------------------AAACCAAAAAAAAAAACAAAAAACAAAAAA---------C-GACCAAA-----AAACAAAAACAAACAAATTCGCTTGCTAAT--ATT-CTGTAACACGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTGTCTC-CGAT-------------CGTG----------TC------------------------CACGATCATGCTCACCCGTT--------C-GATCCG---CAGGCCTGTCGGCATGGCCTGGTGCAGCACCTGGAACACCTGCTGTTCTACGG
droRho1 scf7180000777200:284755-285153 - ATGCCACGCTGGGAATCCAGGACAGTCAGGGCTGGAACGAGGTCCATCAGGTGAGTCGGTGACGG-TCCTTGA----------------------------------------------CCCT-GG---------------C---------------------------GATCCGTAACAGCAA----CCGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AA-AACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTCT-------TCTC----TCTCTCTTCT-----------TTCT---------T-GAACTCTTCTTTTCTAACTCTAT---AAACA-A------------------------AAA------------------------------CCAAA-C-AACCAAA-----AAACAAAA---ATCAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTGTCTC-CGCC-----------------------------------------------------CAC-----TGTTCACCCGAT--------C-GATCCG---TAGGCCTGTCGGCACGGCCTGGTGCAGCACCTGGAACACCTGCTGTTCTACGG
droBia1 scf7180000301592:113797-114186 - ATGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCAGGTGAGTCGGTGGCGG-TCCTTGC--------------------------------------------ACTCCT-GG---------------C---------------------------GACCCGTAACAGCAA----CTGCTTTGACCCCGAGCC----------AGT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------A--AACCGTTGAAC-------------GCCAATTAATGATCGAATT-------CTCT--------CTC----TCTTTCTTCT-----------TTCT---------G-GAACTCTTCTTGTCTAACTCTAT---AAACA-A------------------------AAA------------------------------CCAA----------------AAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TTT------GCATCTC----T---------GCCGCATCCTTTGGCTGTCTCCCGA-----------------------------------------------------------------TCACGCGGTTGATCGCTC-CATCCG---CAGGCCTGTCGGCACGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droTak1 scf7180000415376:181479-181846 - ATGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCAGGTGAGTCGGTGGCGG-TCCTTG--GA-------------------------------------------CCCTTGGAT-------------------------------------C----CTCCGTAACAGCAA----CTGCTTTGACCCCCAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AAAAACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTCT----------C----TCTCTCTTCC-----------TTCT---------T-GAACTCTTCTACTCTAACTCTAT---AAACA-A------------------------AAA------------------------------CC-----------------------A-----AACAAACTCGCTTGCTAAT--ACT-CTGTAACCCGCGTTTATTGGTTGGCA-TTT------GCATCTC----T---------GCTGCATCCTTTGGCTCCC---------------------------------------------------------------------------CC-------------GATCCG---CAGGCCTGTCGGCATGGCCTCGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droEug1 scf7180000409462:2876189-2876570 + ATGCCACACTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCTTGA----------------------------------------------CCCT-GGAT-------------------------------------CACAGATCCATAACAGCAA----CTGCTTTGACCCCAAGCC----------AAA-TC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAA-------------GCCAATTAATGATTGAATT-------CTCTCTC----TCTC------TT-------TCTCTTCTCTCTCT---------TGGAATTCTTCTTATCTAACTCTGT---AAACA-A------------------------AAA------------------------------C-AA----------------AAACAA--------AAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCAATAT------GCATCTT----T---------GCTGCATCCTTTGGCTGTCTC-CA------------------------------------------------------------------------AAT--------C-GATCCG---TAGGCCTGTCGGCATGGCCTGGTACAGCACCTGGAACACCTGCTGTTCTACGG
dm3 chr2R:9956867-9957269 - ATGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCGTTATGAT----------------------------------CCTGGTGATCCT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AAACGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTATC----TCTC----TCTCTCTTCT-----------TTCT---------TGAAACTCTTCTACTCTAACTCT----AAAACA-AA-----------CA----------------------------------------AAACCAAA------------ACAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GTTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCTCTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GACACG---TAGGCCTGTCGGCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droSim2 2r:10680387-10680789 - dsi_12523 ACGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCGTGATGAT----------------------------------CCTGGCGATCCT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCCATTAATGATTGAATT-------CTTTATC----TCTC----TCTCTCTTCT-----------TTCT---------TGAAACTCTTCTACTCTAACTCT----AAAACA-AA-----------CA----------------------------------------AAACCAAA------------CCAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCTCTC-CGT-----------------------------------------------------------------TCACCCGAT--------C-GACCCG---TAGGCCTGTCGCCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droSec2 scaffold_1:7481217-7481607 - ACGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCACGTGAGGCGGTGGCGG-TGCGTGATGAT----------------------------------ACTGGCGATCCT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGAC-CCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TG-CCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTATC----TCTC----TCTTTCTTCT-----------TTCT---------TGAAACTCTTCTACTCTAACTCT----AAAACA-AA-----------CA----------------------------------------AAAC----------------------CAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCTCTC-CGT-----------------------------------------------------------------TCACCCGAT--------C-GACCTG---TAGGCCTGTCGCCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droYak3 2R:9905745-9906156 - ATGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCGTGCTGA-------------------------------------------TCCT-GG---------------C---------------------------GATCTCTAACAGCAA----CTGCTTTGACCCCAAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTATC----T--------CTCTCTTCT-----------TTCT---------TGAAACTCTTCTTCTCTAACTCT----AA-ACAAAA-----------CA----------A--------AACAAAACAAAAACCAAAACAAAACCAAA------------TCAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATATC----T---------GCTGCATCCTTTGGCTCTCTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GATCCG---TAGGCCTGTCGCCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGG
droEre2 scaffold_4845:15864398-15864795 + ACGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTGCATCAGGTGAGTCGGTGGCGG-TCCGTGATCA-------------------------------------------TCCT-GG---------------C---------------------------GATCCTTAACAGCAA----CTGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTGTATT-------CTTTATC----T--C----TCTCTCTTCT-----------TTCT---------TGAAACTCCTCTTCTCTAACTCT----AA-ACA-AA-----------CA----------------------------------------AAACCAACACA-----AAAATCAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCCCTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GATGCG---CAGGCCTGTCGCCATGGCCTCGTCCAGCACCTGGAACACCTGCTGTTCTACGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ATGCCACATTGGGCATACAGGATACACAAGGCTGGAACGAGGTTCATCAGGTGAGTTGGTGACGG-TCCATCAAAA---------------------------------------GGGATCTT-GG---------------C---------------------------TT-TA--GATAGAAC----C--ATTTGTCCCATAG------------A-A-TT--------------------TAGATTAAC----------------------TGGTGT---------------------TGGCTCTTTTTATGGCCACCA-AAGAAAAGAAAACCAAATGAAATTGCTAATT-----TTGAATC---TACTCTCTCTCTCTCTTTTTCT-------TTCT-----------TTCTCCGAACTATT-GAACTATTTCTATCTAACCTTGTCTAAAACCAAA-----------CA----------A------------------------------AACA-AAACA-----AA-----AAACAA-----------AACGCTTTTTAACCAACT-CTATAAACTGGG--------T---------------------C----T---------ATTGGGCTCTCTGGCTC-----------------------------------------------------------------------------------------------------CAGGCCTGTCGTCATGGCCTGGTTCAGCATCTGGAACACTTGTTGTTCTACGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................CAAGGCTGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............ATACAGGATACACAAGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............ATACAGGATACACAAGGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTCATGGCCTGGTT.............................1811.00110000
..........................CAAGGCTGGAACGAGGTTCATCAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................GGATACACAAGGCTGGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......CATTGGGCATACAGGATACACAAGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCCTGGTTCAGCATCTGGA..................2211.00110000
..................AGGATACACAAGGCTGGAACGAGGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...........GGCATACAGGATACACAAGGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................ACAAGGCTGGAACGAGGTTCATCAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGG--------T---------------------C----T---------ATTGGGCTT..................................................................................................................................................................1820.50110000
droVir3
ACGCCACGCTGGGCATACAGGACAGCCAGGGCTGGAACGAGGTGCATCAGGTAAGTCGGTGACGG-TCCAGATAG-CT--TTACGACTTCTATTTATTGATATATATTTTTTTT----------GGTT---------CTTGT----GAAAGC----CCCCGCTCC----CTATCCA-------------------------------AATTGAGAGAAA-CT--------------------TTGGTGC------------------------TGGTGC---------------------TGGGAA-------------------AGATATA----AAATTTGTTTGCTAATTG-------ATTT-------TT---------------------ACTT------C-------------------------TCTTC-TGTCTAACTTT----AAA------CGCTTGC----------------------------------------------------------------------------------------------CTAAC--TAT-TGTTAAACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------TGCT---CAGGCCTGTCGGCATGGCCTGGTGCAGCACTTGGAACACTTGTTGTTCTACGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................GAAA-CT--------------------TTGGTGC------------------------TGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000000002
................................TGGAACGAGGTGCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000200000000000000000000000000000000000
.....................ACAGCCAGGGCTGGAACGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
..................................GAACGAGGTGCATCAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................A----AAATTTGTTTGCTAATTG-------AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTGGAACACTTGTTGTT......2011.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................TG-------ATTT-------TT---------------------ACTT------C-------------------------TCTTC-TGTCTAAC....................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000001
.......................AGCCAGGGCTGGAACGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.................CAGGACAGCCAGGGCTGGAACGAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TAATTG-------ATTT-------TT---------------------ACTT------C-------------------------TCTTC-TGTC........................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
..........................CAGGGCTGGAACGAGGTGCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTCGGCATGGCCTGGTGCA...........................2211.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
ACGCCACGTTGGGCATACAGGACAGCCAGGGCTGGAACGAGGTGCACCAGGTAAGTCGGTGACGGGTCCAAATGG-TTGCTAACATCTTCTCTATA-CGACTGAGCTCACTCTT----------GGTT---------CTTGT----GAATGA----CCCCGCTGC----CTATCCA------------------------------AAATTGAGAGA-A-CT--------------------TTGGTGCGA----------------------AGGTGC---------------------TGGGAC-------------------AGTTAAG----AAACGTATTTGCTAA-------TTGATTT-------TT---------------------ACTT------C-------------------------TCTTC-TGTCTAACTTT----AAA------CGCTTGCC---------------------------------------------------------------------------------------------CTAAC--TAT-TGTTAAACTGTG------A--------------------------------------------------------------------------------------------------------------------------------------------------------T---TAGGCCTGTCGGCACGGCCTAGTGCAGCACTTGGAGCACTTGTTGTTCTACGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............ATACAGGACAGCCAGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCACGGCCTAGTGCAGC.........................2211.001100000
droGri2
ATGCCACGTTGGGCATACAGGACAGCCAGGGCTGGAATGAAGTGCATCAGGTAAGTCGGTGACGG-TCCAAATTGAT----------------------------------ATAGA-ACTAT----ATTTTCTGGTACTTGC----AATAGCTGCCCTCCGCTCC----CCTCCCAAAGATCCTATCCCAAAATAAAACA------AAAGAGAGAGAAT-CT--------------------CTGGTGAAG----------------------GGATGTTTTTGTTATTCAATTTAATTTTGGCTT-------------GA--GAGATTGAG----A-AT---TTCGCTAATTGATTTTTATATTTATGACTCTTTCTCTCTATCTCTCTCTCTG-------TCTC-------------------------TGCTC-TGGCTAACTTT----TAAA---AACGCTTGCCTAACTATTCAATTAAACA------------------------------ATG------------------GGGAT-----GAT-GAT----------------------------------------------------------------------------------------------------------------------------------------------------------GATGATGA--------TGAT----------TATGAG---CAGGCGTGTCGTCACGGCCTGGTGCAGCACTTGGAACACTTGTTGTTCTACGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................CAGGACAGCCAGGGCTGGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
..................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTG-------TCTC-------------------------TGCTC-TGG.........................................................................................................................................................................................................................................................................................................................................................................2111.00110
dp5
ACGCGACGCTCGGTATCCAGGATAGCCAGGGCTGGAACGAGGTCCATCAGGTCAGTCGGTGGCGG-TCCTTT--GAA----------------------------------AACGCCAGTCCC-GT---------------AGACT-------------------CCCAGATTCGTAACTGCCA----ATGCTTATCCCCCTCGTC---------GAAT-CT--------------------CTGGTGAAGCCCCCGCCCGCAGTCCCCCAGCCGGTGTCT--G----------TACCCCTGCCCC-------------CA-AAGTGTTGAAT-------------GCCAATTAATATTTGAATT-------CTCTCTC----T------------TTACTTTCTC-------------------------TCCTC-TCTCTAACTCT----AAAA---AA-----------CA----------A------------------------------ACACAAA-CA-----CA---------AA-----AACAAA--CGCTTTCTAAC--TCTTTTGTAACCCGCG------GGTTG-TA-TCTGTATCTGCATCTGTATCTGCAACTGTATCTGCATCCTTCCGCCCTGTT-CA------------ATCTGCAATCCGCAATCCGCA---------ATGAG-------------------------------------------A---CAGGCCTGTCGGCACGGCCTGGTTCAGCACTTGGAACACCTCCTGTTCTACGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGCCTGGTTCAG..........................1511.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCAATCCGCA---------ATGAG-------------------------------------------A---C....................................................2011.0010010000000
.......GCTCGGTATCCAGGATAGCCAGGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............ATCCAGGATAGCCAGGGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
ACGCGACGCTCGGTATCCAGGATAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGTTCAGCACTTGGA..................1911.0010100000000
.......................AGCCAGGGCTGGAACGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................GTAACTGCCA----ATGCTTATCCCCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGTATCTGCATCCTTCCGCCC..........................................................................................................................................................2511.0011000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TA-TCTGTATCTGCATCTG.........................................................................................................................................................................................20200.0510000000010
droAna3
ATGCCACACTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTGCATCAGGTAGGTCGGTGGCGG-TCCTTGAGG--------------------------------------TGGTCCTCCT-G----------------------TATGC-----------------CTCCCGTAACAGAAA----CTGCTTTGTCCCCGAGCC----------AGT-TCCCTCCTCCTCCTCCTCCCCCCTGGTGAAA----------------------TGGT----------------------------------------------------GAAA-------------GCCAATTAATGATTCAATT-------CTCTATT----TCTCTCTCTCTT-------TCTCGTTTCTTACT---------T-AAACTTAAA-CATCTAACTCTTA---AAACA-A------------------------AAA----------------------------ATCCAAA------------AATACACAA-----AACAAATACGCTTGCTAAT--AAT-ATGTAACCCGCG------GGTTGGCATCTT------GCAA------------------CTGCATCCTTTGGCTCT--A-CGCTCT----------CCACCACCCGAAACCGAAA---------CTGAAACCGAAACCA---------CCATCCGAT--------T-G---TG---TAGGCCTGTCGGCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................ACAGCCAGGGCTGGAACGAGGTGCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCATGGCCTGGTCCAGCACCTGG...................2711.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------AATACACAA-----AACAAATACGCTTGCT.............................................................................................................................................................................................................................................2711.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCCTGGTCCAGCACCTGGA..................2211.001010000
....CACACTGGGCATCCAGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------CTGCATCCTTTGGCTCT--A-CGCT.................................................................................................................................................2411.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGGCCTGGTCCAGCACCT.....................2211.001100000
droBip1
ATGCCACACTGGGCATCCAGGACAGTCAGGGCTGGAACGAGGTGCATCAGGTAAGTCGGTGGCGG-TCCTTGA-GG-------------------------------------------TCCT-TG---------------C----------------------------TCCTGTAACAGAAA----CTGCTTTGTCCCCGAGCC----------AGTTCC--------------------CCGGTGAAA----------------------TG---------------------------------------------------------------------------ATTAATGATTGAATT-------CTCTATT----TCTCTCTCTCTT-------TCTCGTTTCTTACT---------CAAAACTTTTATAATCTAACTTTTA---AAACA-A------------------------AAA------------------------------ATA------------------AATAA-----AAT-GATATGCTTGCTAAT--AATAATGTAACCCGCG------GGTTGGCAACTT------GCAA------------------CTGCATCCTTTGGCTCT--A-CGCTCTTTGGCTCC-ACCCCGA-----------------------------------------------CACCCGAC-----------ACCCG---TAGGCCTGTCGGCATGGCCTCGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droKik1
ATGCCACACTGGGCATCCAGGATAGTCAGGGCTGGAACGAGGTGCATCAGGTGAGTCGGTGACGG-TCCTTGAAG--------------------------------------------CCAG------------------T-----------GAAACCCGGTCT----GATTCCTAACAGCAAAACCCAGCTTTGAACCCAAGCC----AAAACCAAT-TC--------------------CCGGTGATT----------------------T------------------------------------------------------------------------GCCAATTACTGATTGA-TT-------CTCT----------C----TCTCTCTTCT-----------TTCT---------T-TAACTTCTC-TTTCTAACTCT----AAAA---AATAT--------CA----------A------A-----------------------AACAAAAACA-----AA-----AAACCA-----AAAAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GTTTG----------------TGGC----T---------GCTGCATCCTTTGGCTACCTC-CGTTA--------CGT-CGTGA-----------------------------------------------TTCCCGAT--------T---CCGGTATCAGGCCTGTCGGCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droFic1
ACGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCAGGTGAGTCGGTGGCGG-TCCTTCTCCA-------------------------------------------ACAT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGACCCCGCGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTCAATT-------CTCT----------C----TCTCTCTTCT-----------TTCT---------T-GAACTTTTCTTTTCTAACTCT----TAAA---AA-----------CA----------A------------------------------AAACAAAACA-----AA-----AAACAA-----AACCAAATCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TTT------GCATCTC----T---------GCTGCATCCTTTGGCTGTCTC-CA------------AACTCCGATCTCCGATCTCCGATCTCCGATC-----------------------TGATTCGAT--------CTGATCCG---TAGGCCTGTCGGCACGGCCTGGTGCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droEle1
ATGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTCCACCAGGTGAGTCGGTGACGG-TCCTTGG----------------------------------------------CGCT-CG---------------C---------------------------GATCCTTAACAGCAA----CCGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AAAAACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTCTC----TCTCTCTCTCTCTCTCCT-----------TTCT---------T-GAACTCTTCTTTTCTAACTCTAT---AAACA-A------------------------AAACCAAAAAAAAAAACAAAAAACAAAAAA---------C-GACCAAA-----AAACAAAAACAAACAAATTCGCTTGCTAAT--ATT-CTGTAACACGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTGTCTC-CGAT-------------CGTG----------TC------------------------CACGATCATGCTCACCCGTT--------C-GATCCG---CAGGCCTGTCGGCATGGCCTGGTGCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droRho1
ATGCCACGCTGGGAATCCAGGACAGTCAGGGCTGGAACGAGGTCCATCAGGTGAGTCGGTGACGG-TCCTTGA----------------------------------------------CCCT-GG---------------C---------------------------GATCCGTAACAGCAA----CCGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AA-AACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTCT-------TCTC----TCTCTCTTCT-----------TTCT---------T-GAACTCTTCTTTTCTAACTCTAT---AAACA-A------------------------AAA------------------------------CCAAA-C-AACCAAA-----AAACAAAA---ATCAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTGTCTC-CGCC-----------------------------------------------------CAC-----TGTTCACCCGAT--------C-GATCCG---TAGGCCTGTCGGCACGGCCTGGTGCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droBia1
ATGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCAGGTGAGTCGGTGGCGG-TCCTTGC--------------------------------------------ACTCCT-GG---------------C---------------------------GACCCGTAACAGCAA----CTGCTTTGACCCCGAGCC----------AGT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------A--AACCGTTGAAC-------------GCCAATTAATGATCGAATT-------CTCT--------CTC----TCTTTCTTCT-----------TTCT---------G-GAACTCTTCTTGTCTAACTCTAT---AAACA-A------------------------AAA------------------------------CCAA----------------AAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TTT------GCATCTC----T---------GCCGCATCCTTTGGCTGTCTCCCGA-----------------------------------------------------------------TCACGCGGTTGATCGCTC-CATCCG---CAGGCCTGTCGGCACGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droTak1
ATGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCAGGTGAGTCGGTGGCGG-TCCTTG--GA-------------------------------------------CCCTTGGAT-------------------------------------C----CTCCGTAACAGCAA----CTGCTTTGACCCCCAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AAAAACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTCT----------C----TCTCTCTTCC-----------TTCT---------T-GAACTCTTCTACTCTAACTCTAT---AAACA-A------------------------AAA------------------------------CC-----------------------A-----AACAAACTCGCTTGCTAAT--ACT-CTGTAACCCGCGTTTATTGGTTGGCA-TTT------GCATCTC----T---------GCTGCATCCTTTGGCTCCC---------------------------------------------------------------------------CC-------------GATCCG---CAGGCCTGTCGGCATGGCCTCGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
droEug1
ATGCCACACTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCTTGA----------------------------------------------CCCT-GGAT-------------------------------------CACAGATCCATAACAGCAA----CTGCTTTGACCCCAAGCC----------AAA-TC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAA-------------GCCAATTAATGATTGAATT-------CTCTCTC----TCTC------TT-------TCTCTTCTCTCTCT---------TGGAATTCTTCTTATCTAACTCTGT---AAACA-A------------------------AAA------------------------------C-AA----------------AAACAA--------AAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCAATAT------GCATCTT----T---------GCTGCATCCTTTGGCTGTCTC-CA------------------------------------------------------------------------AAT--------C-GATCCG---TAGGCCTGTCGGCATGGCCTGGTACAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotal
No Reads
dm3
ATGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCGTTATGAT----------------------------------CCTGGTGATCCT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AAACGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTATC----TCTC----TCTCTCTTCT-----------TTCT---------TGAAACTCTTCTACTCTAACTCT----AAAACA-AA-----------CA----------------------------------------AAACCAAA------------ACAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GTTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCTCTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GACACG---TAGGCCTGTCGGCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................TGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000010000000000000000000000000100000000000000000000000000000000000000
.......................AGCCAGGGCTGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCCTGGTCCAGCACCTG....................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------------------------------------------------------------TCACCCGAT--------C-GACACG---TAG..................................................2113.0030000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCTGGTCCAGCACCTGGAACACC.............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GGCTGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............TCCAGGACAGCCAGGGCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCTGGTCCAGCACCTGGAA.................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCCACGTTGGGAATCCAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CGGTGAAA----------------------TGGTGT---------------------TGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000
.....ACGTTGGGAATCCAGGACAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGGGCTGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGGCATGGCCTGGTCCA...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000
..................................................GTGAGTCGGTGGCGG-TCCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................CCGGTGAAA----------------------TGGTGT---------------------TGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................GACAGCCAGGGCTGGAACGAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAGGGCTGGAACGAGGTTCATCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATGGCCTGGTCCAG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGGACAGCCAGGGCTGGAACGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTCGGTGGCGG-TCCGTTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................GTGAGTCGGTGGCGG-TCCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
ATGCCACGTTGGGAATCCAGGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................CCAGGGCTGGAACGAGGTTCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTC----T---------GCTGCATCCTTTGGC............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................AGGGCTGGAACGAGGTTCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................GCCAGGGCTGGAACGAGGTTCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGCCTGGTCCAGCACCTGGAACACC.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCA-TAT------GCATCTC----T---------GCT........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....ACGTTGGGAATCCAGGACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................C----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCCGCG------GTTTGGCA-TAT------G...............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............ATCCAGGACAGCCAGGGCTGGAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCTGGTCCAGCACCTGGAACACCT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCAGGGCTGGAACGAGGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTCGCTTGCTAAT--ACT-TTGTAA..............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGGACAGCCAGGGCTGGAACGAGGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCCTGGTCCAGCACCTGGAA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGAACGAGGTTCATCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
ATGCCACGTTGGGAATCCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................CAGGGCTGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.TGCCACGTTGGGAATCCAGGACAGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCG------GTTTGGCA-TAT------GCATC...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTGCTAAT--ACT-TTGTAACCCG..........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................T-----------TTCT---------TGAAACTCTTCTACT.........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCCACGTTGGGAATCCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------------------------------------------TCACCCGAT--------C-GACACG---TAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................AGCCAGGGCTGGAACGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................TCATCAGGTGAGTCGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCTGCTGTTCTACGG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CACGTTGGGAATCCAGGACAGCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................AGCCAGGGCTGGAACGAGGTTCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAGCCAGGGCTGGAACGAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGCCAGGGCTGGAACGAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCCAGGGCTGGAACGAGGTTCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................TGGAACGAGGTTCATCAGGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........TGGGAATCCAGGACAGCCAGGGCTGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGCCAGGGCTGGAACGAGGTTCATCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTTCT-----------TTCT---------TGAAACTC................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CCGGTGAAA----------------------TGGTGT---------------------TGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................ACAGCCAGGGCTGGAACGAGGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGGGAATCCAGGACAGCCAGGGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGGGCTGGAACGAGGTTCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCATGGCCTGGTCCAGC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................AAA----------------------TGGTGT---------------------TGGCCC-------------AC-AAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTCGGCATGGCCTGGTCCAGC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCCAGGACAGCCAGGGCTGGAACGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATCCAGGACAGCCAGGGCTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCCACGTTGGGAATCCAGGACAGCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GACACG---TAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------------------------------------------------------------TCACCCGAT--------C-GACACG---T....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....CACGTTGGGAATCCAGGACAGCCAGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............TCCAGGACAGCCAGGGCTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------ACAAAACAA-----AACAAATT.....................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCGTGATGAT----------------------------------CCTGGCGATCCT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCCATTAATGATTGAATT-------CTTTATC----TCTC----TCTCTCTTCT-----------TTCT---------TGAAACTCTTCTACTCTAACTCT----AAAACA-AA-----------CA----------------------------------------AAACCAAA------------CCAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCTCTC-CGT-----------------------------------------------------------------TCACCCGAT--------C-GACCCG---TAGGCCTGTCGCCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................AGCCAGGGCTGGAACGAGGTTCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATGGCCTGGTCCAGCACCTGGAAC................2811.00100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCGAT--------C-GACCCG---TAGGC................................................2111.00100000000010000000
..............ATCCAGGACAGCCAGGGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------GGTTGGCA-TAT------GCATCTG----A---------T..........................................................................................................................................................................2140.25100000000000010000
droSec2
ACGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCACCACGTGAGGCGGTGGCGG-TGCGTGATGAT----------------------------------ACTGGCGATCCT-GG---------------C---------------------------GATCCCTAACAGCAA----CTGCTTTGAC-CCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TG-CCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTATC----TCTC----TCTTTCTTCT-----------TTCT---------TGAAACTCTTCTACTCTAACTCT----AAAACA-AA-----------CA----------------------------------------AAAC----------------------CAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCTCTC-CGT-----------------------------------------------------------------TCACCCGAT--------C-GACCTG---TAGGCCTGTCGCCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ATGCCACGTTGGGAATCCAGGACAGCCAGGGCTGGAACGAGGTTCATCAGGTGAGTCGGTGGCGG-TCCGTGCTGA-------------------------------------------TCCT-GG---------------C---------------------------GATCTCTAACAGCAA----CTGCTTTGACCCCAAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTGAATT-------CTTTATC----T--------CTCTCTTCT-----------TTCT---------TGAAACTCTTCTTCTCTAACTCT----AA-ACAAAA-----------CA----------A--------AACAAAACAAAAACCAAAACAAAACCAAA------------TCAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATATC----T---------GCTGCATCCTTTGGCTCTCTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GATCCG---TAGGCCTGTCGCCATGGCCTGGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATGGCCTGGTCCAGCACCTGGA..................2617.00700000000007
.........TGGGAATCCAGGACAGCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGGTCCAGCACCTG....................1811.00101000000000
.................CAGGACAGCCAGGGCTGGAACGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000100000
ATGCCACGTTGGGAATCCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
..............ATCCAGGACAGCCAGGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
ACGCCACGCTGGGCATCCAGGACAGCCAGGGCTGGAACGAGGTGCATCAGGTGAGTCGGTGGCGG-TCCGTGATCA-------------------------------------------TCCT-GG---------------C---------------------------GATCCTTAACAGCAA----CTGCTTTGACCCCGAGCC----------AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------TGGCCC-------------AC-AACCGTTGAAC-------------GCCAATTAATGATTGTATT-------CTTTATC----T--C----TCTCTCTTCT-----------TTCT---------TGAAACTCCTCTTCTCTAACTCT----AA-ACA-AA-----------CA----------------------------------------AAACCAACACA-----AAAATCAAAACAA-----AACAAATTCGCTTGCTAAT--ACT-TTGTAACCCGCG------GGTTGGCA-TAT------GCATCTC----T---------GCTGCATCCTTTGGCTCCCTC-CGC-----------------------------------------------------------------TCACCCGAT--------C-GATGCG---CAGGCCTGTCGCCATGGCCTCGTCCAGCACCTGGAACACCTGCTGTTCTACGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAACTCT----AA-ACA-AA-----------CA----------------------------------------AAACC..........................................................................................................................................................................................................................................................................................2711.0010100000
................................TGGAACGAGGTGCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.........................................GTGCATCAGGTGAGTCGGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001
........................................................................................................................................................................................................................AAT-CC--------------------CCGGTGAAA----------------------TGGTGT---------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100

Generated: 05/18/2015 at 01:44 AM