ID:

dwi_1490

 Coordinate:

scf2_1100000004558:863968-864118 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.4 -5.3 -5.3

Flybase annnotation

CDS [Dwil\GK22103-cds]; exon [dwil_GLEANR_5207:9]; intron [Dwil\GK22103-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGCTTATTAATTAACTCTACATATTATATACATATTCATTTTCGTTTTGCCAAAAGAAAAAAAGAAAATTTTGAAAAACCTTTCGCCTATGCCAAAATTTAGATACTTTTAATCCTCAGTCTTGGCTTCCTGCTAACTCTACTCTATGTGTTCACTCAAAAAGCAATATAATAACATCGTTCTGACTACAAAATTTATAGGTAAACCCGCGCACACGATCCGAAACGCCAACCCAACCACGATGGGGTCT
********************************************************************************************************************..((..(((((.....)))))..))..................................................************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M020
head
 M045
female body
 V119
head
 V117
male body		 V118
embryo
..........................................................................................................................................................................AATAACATCGTTCTGACTACA............................................................ 21 0 1 14.00 14 13 1 0 0 0
......................................................................................................................................................................ATATAATAACATCGTTCTGACTACA............................................................ 25 0 1 8.00 8 8 0 0 0 0
....................................................................................................................TCAGTCTTGGCTTCCTGCTAACTC............................................................................................................... 24 0 1 7.00 7 7 0 0 0 0
........................................................................................................................................................................ATAATAACATCGTTCTGACTACA............................................................ 23 0 1 6.00 6 6 0 0 0 0
..................................................................................................TTTAGATACTTTTAATCCT...................................................................................................................................... 19 0 1 5.00 5 5 0 0 0 0
.....................................................................................................................................................................AATATAATAACATCGTTCTGACTACA............................................................ 26 0 1 5.00 5 5 0 0 0 0
.........................................................................................................................................................................TAATAACATCGTTCTGACTACA............................................................ 22 0 1 4.00 4 3 1 0 0 0
...........................................................................................................................................................................ATAACATCGTTCTGACTACA............................................................ 20 0 1 4.00 4 4 0 0 0 0
......................................................................................................................................................................ATATAATAACATCGTTCTGACT............................................................... 22 0 1 4.00 4 4 0 0 0 0
..................................ATTCATTTTCGTTTTGCCAAAAG.................................................................................................................................................................................................. 23 0 1 4.00 4 4 0 0 0 0
................................................................................................................ATCCTCAGTCTTGGCTTCCTGCTAACTC............................................................................................................... 28 0 1 4.00 4 4 0 0 0 0
..........................................................................................................................................................................AATAACATCGTTCTGACTACAA........................................................... 22 0 1 3.00 3 3 0 0 0 0
..............................................................AAGAAAATTTTGAAAAACC.......................................................................................................................................................................... 19 0 1 3.00 3 3 0 0 0 0
...................................TTCATTTTCGTTTTGCCA...................................................................................................................................................................................................... 18 0 1 3.00 3 3 0 0 0 0
............................................................................................................................................................................TAACATCGTTCTGACTACAAAA......................................................... 22 0 1 2.00 2 2 0 0 0 0
......................................................................................................................................................................ATATAATAACATCGTTCTGA................................................................. 20 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................................ATAATAACATCGTTCTGACT............................................................... 20 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................AATAACATCGTTCTGACT............................................................... 18 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................CTATGTGTTCACTCAAAAAGCA..................................................................................... 22 0 1 2.00 2 0 2 0 0 0
...................................................................................................................................................................GCAATATAATAACATCGTTCTGACTACA............................................................ 28 0 1 2.00 2 2 0 0 0 0
.................................TATTCATTTTCGTTTTGCC....................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0
............................................................................................................................................................................TAACATCGTTCTGACTACA............................................................ 19 0 1 2.00 2 2 0 0 0 0
......................................................................................................................................................................ATATAATAACATCGTTCTGACTACAA........................................................... 26 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................TCTGACTACAAAATTTATAGGT................................................ 22 0 1 2.00 2 2 0 0 0 0
............................ATACATATTCATTTTCGTT............................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................AACATCGTTCTGACTACA............................................................ 18 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................AGCAATATAATAACATCGTTCTGACTACA............................................................ 29 0 1 2.00 2 2 0 0 0 0
......................TATTATATACATATTCATTTTCGTT............................................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................TAATAACATCGTTCTGACTACAA........................................................... 23 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................TATAATAACATCGTTCTGACTA.............................................................. 22 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................GTCTTGGCTTCCTGCTAACTCTACT........................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................ATGCCAAAATTTAGATACTTTTA........................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
..................................ATTCATTTTCGTTTTGCC....................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
................................................................................................................ATCCTCAGTCTTGGCTTCCTGCTCACTC............................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
......................................................................TTTGAAAAACCTTTCGCCTATGCC............................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................AATAACATCGTTCTTACTACA............................................................ 21 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................ATAACATCGTTCAGACTACAAA.......................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................TAATAACATCGTTCTGACTACAAA.......................................................... 24 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................CACGATCCGAAACGCCAACCCAACCACG......... 28 0 1 1.00 1 1 0 0 0 0
......................................................................................................................AGTCTTGGCTTCCTGCTAACTCTACT........................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................GATCCGAAACGCCAACCCAA.............. 20 0 1 1.00 1 1 0 0 0 0
.......................ATTATATACATATTCATTTTCGTTTTGCC....................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
................................ATATTCATTTTCGTTTTGCC....................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................GCGCACACGATCCGAAACGCC..................... 21 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................AATATAATAACATCGTTCTGG................................................................. 21 1 1 1.00 1 1 0 0 0 0
...................................TTCATTTTCGTTTTGCCAAAAG.................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................AATAACATCGTTCTGACG............................................................... 18 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................AATATAATAACATCGTTCTGA................................................................. 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................CCTCAGTCTTGGCTTCCTGCTAACTC............................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................CACACGATCCGAAACGCC..................... 18 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................AATAACATCGTTCTGACTACAAA.......................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TCTGACTACAAAATTTATAGGTAAACC........................................... 27 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................ATCAATATAATAACATCGTTCTGACTACA............................................................ 29 1 1 1.00 1 1 0 0 0 0
....................................................................................................................TCAGTCTTGGCTTCCTGCTAACTCTACT........................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................TAATAACATCGGTCTGACTACA............................................................ 22 1 1 1.00 1 1 0 0 0 0
..........................................................AAAAAAGAAAATTTTGAAAAACC.......................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.............................................................AAAGAAAATTTTGAAAAACCTTTCGCCT.................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
................................................................................................................................TCCTGCTAACTCTACTCTATGTGTTCA................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
................................................................GAAAATTTTGAAAAACCT......................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.........................TATATACATATTCATTTTCGTTTTGCCA...................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.............................................................AAAGAAAATTTTGAAAAACCT......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................ATATACATATTCATTTTCGTTTTGCC....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................ATTTTGAAAAACCTTTCGCCTATGCC............................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
....................................TCATTTTCGTTTTGCCAAAAG.................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................TATAATAACATCGTTCTGACTACAA........................................................... 25 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................TATAATAACATCGTTCTGACT............................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................ATCCTCAGTCTTGGCTTCCTGC..................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................CTACTCTATGTGTTCACTCAAA.......................................................................................... 22 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................CTGACTACAAAATTTATAGG................................................. 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................CAGTCTTGGCTTCCTGCTAACTCTACCCT......................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................AACCCGCGCACACGATCCGAAACGCCA.................... 27 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................ATAACATCGTTCTGACTACAAAA......................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................................CTCAGTCTTGGCTTCCTGCTAACTCT.............................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................ATTTATAGGTAAACCCGCGCACACG................................. 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TCTGACTACAAAATTTATAGGTAAACCCG......................................... 29 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................CGCGCACACGATCCGAAACGCC..................... 22 0 1 1.00 1 0 0 1 0 0
....................................................AAAAGAAAAAAAGAAAATTTTGAAAAACC.......................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................TAATAACATCGTTCTGACT............................................................... 19 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................TATAATAACATCGTTCTGACTACA............................................................ 24 0 1 1.00 1 1 0 0 0 0
..............................ACATATTCATTTTCGTTTTGCCAA..................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................CACACGATCCGAAACGCCAACCCAACCA........... 28 0 1 1.00 1 0 0 0 1 0
..................................ATTCATTTTCGTTTTGCCAAAAGAAA............................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................TATTCATTTTCGTTTTGCCAAAAG.................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..........................................................AAAAAAGAAATTTGTGGAAAACC.......................................................................................................................................................................... 23 3 14 0.07 1 0 0 0 0 1

Anti-sense strand reads

TTCGAATAATTAATTGAGATGTATAATATATGTATAAGTAAAAGCAAAACGGTTTTCTTTTTTTCTTTTAAAACTTTTTGGAAAGCGGATACGGTTTTAAATCTATGAAAATTAGGAGTCAGAACCGAAGGACGATTGAGATGAGATACACAAGTGAGTTTTTCGTTATATTATTGTAGCAAGACTGATGTTTTAAATATCCATTTGGGCGCGTGTGCTAGGCTTTGCGGTTGGGTTGGTGCTACCCCAGA
************************************************************..((..(((((.....)))))..))..................................................******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M045
female body
..........................................................................................................................................AGATGAGATACACAAGTG............................................................................................... 18 0 1 1.00 1 0 1 0
................................................................................GAAAGCGGATATGGGTTTAA....................................................................................................................................................... 20 2 1 1.00 1 1 0 0
................................................................................GAAAGCGGATATGGGTTT......................................................................................................................................................... 18 2 13 0.38 5 1 0 4
.................................................................................AAAGCGGATATGGGTTTA........................................................................................................................................................ 18 2 17 0.35 6 1 0 5
................................................................................GAAAGCGGATACAGGTTTA........................................................................................................................................................ 19 2 9 0.11 1 1 0 0
..................................................................................AAGCGGATATGGGTTTAA....................................................................................................................................................... 18 2 12 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004558:863918-864168 - dwi_1490 AAGCT-TATTAATTAA-----CT-----CTACATATTATATACATATTCATTTTC-GTTTTGCCAAAAGAAAAAA----AGAAAATTTTG-AAAAACCTTTCGC------CTAT---------------------GCCAAAATTTA-G-------------AT--ACTTT-TA-AT---CCTCAGTCT--TGGCTTCCTGCTAAC-TCTACTCTATGTGTTCACTCAA-AAA------------------------GCAATATA--ATAACATCGTTCTGACTACAA-------A-AT-----TT--ATAGGTAAACCCGCGCACACGATCCGAAACGCCAACCCAACCACGATGGGGTCT
droVir3 scaffold_12875:17282273-17282474 - dvi_7455 AAGCC-TATT---TCA-----AATATATT------------------------TACTTATTG-------------TTTGCGCAAATTT-A-AACG-C-------------CCCCCT---AA-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCCCG---A------CTCTATGTGTTCATTCAA-A--------------------------TAAA--CA--ATAATATCGTTCTGACTACAA-------AAAC-----TT--ATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGATGGGGCCA
droMoj3 scaffold_6496:10728164-10728386 + dmo_1084 AAGCT-TATT---TCA-----ATTATATT-------TATATACATATT-ATA-TA--C--TC-------------TTTGCGCAAATTT-A-AACG-C-------------CTCCCT---CT-AAA-------TGCATCAA-AATT--------------------AT--T-TATGC---TCTAAGTCT---ACTTTCCCG---A------CTCTATGTGTTCATTCAA-A--------------------------TAAAT--T--ATAATATCGTTCTGACTACAAAAATAAAA-AC-----TTATATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGCTGGGGCCA
droGri2 scaffold_15245:16797736-16797974 - AAGCT-TATT---TCA-----ATTATCTT-------AAT--ATATATA--AA-TA--T--TG-------------TTTGCGCAAATTT-A-AACG-C-------------CTCCCC---AA-AC---------GCACCAA-A-------------------AT--AC--T-TATGC---TCTAAGTCA---ACTTGCCCG---A------CTCTATGTGTTCATTCAA-AGATCAAAAAAGAAAGAAGAAAAA---TAAA--CA--ATAATTTCGTTCTGACTACACTTACA-AA-AC-----TTATATAGGTTAACCCTCGAGCTCGCTCTGAAACTCCATCGCAACCACGCTGGGGCCA
dp5 3:18978615-18978827 + dps_1310 AAGCT-TATTAAT----------TAT------------TAAACATATA--AA-TA--TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------CA-ACAAAATACCAACACCAA-ATATA-ATTATAG---------------------TTAATTACAGTCA---ACTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAA-A--------------------------GCAATATA-----ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCAACGCCAACGCAACCTCGCTGGGGCCT
droPer2 scaffold_242:10318-10530 + AAGCT-TATTAAT----------TAT------------TAAACATATA--AA-TA--TTTTGC-------------------AAATTTCA-AACG-C-------------A-C------CA-ACAAAATACCAACACCAA-ATATA-ATTATAG---------------------TTAATTACAGTCA---ACTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAA-A--------------------------GCAATATA-----ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCACAACGCCAACGCAACCTCGCTGGGGCCT
droAna3 scaffold_13266:11877392-11877603 + dan_1955 ATGCT-TGTTAACACAAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTCT---ATTTTCCTG---A------C--TATGTGTTCATTAAA-AA--TT---------------ATTTATGCA----T--AT-ATATCCTTCTGACTCCAA-------C-CA--TCCCA--ATAGGCAATCCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCT
droBip1 scf7180000396547:600063-600278 - ATGCT-TGTTAACACAAAA----------------------------------CACTTATTGCCAGAT------------TCGAGTTTTG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTCT---ATTTTCCTG---A------C--TATGTGTTCATTCAA-AAATTT---------------ATTTATGCA----T--AT-ATATCCTTCTGACTTCAA-------A-ACCATCCCA--ATAGGCACACCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCT
droKik1 scf7180000302385:1079327-1079526 - AAGCTTTATTAATACAAAA-AAT-----C------------------------TA--ATTTGC-------------------CAATTTCG-AACG-C----CGCCTCCGCCTCCCT---CA-GCC-------AGCACCAA-A--CA-AT-----ATACA----------------------------------TATCCTG---AA-TCT-CTATATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCATCGCAACCACGCTGGGGCCT
droFic1 scf7180000453948:1098101-1098308 - AAGCC-TATTAATACA-----AT-----T------------------------TA--CTTTGC-----------------AA-TATTTCG-AACG-C-------------CTCCCT---CG-ACA-------AGCACCAA-ATATA-AT-----ATATATCAT--AC--TCTA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCT
droEle1 scf7180000491107:851794-852014 - AAGCC-TATTAATAT---ACAAT-----T------------------------TA--TTTTGC-----------------AA-AAATTCG-AACG-C-------------CTCCTC---CA-ACAAA-----AGCACCAA-ATACA-ATTACAATTATATCATATAC--T-TA-GC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGAGCTCGCTCCGCCACGCCAACACAATCACGCTGGGGCCT
droRho1 scf7180000779911:249290-249502 + AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCT---CA-ACA-------AGCACCAA-ATACA-ATTACAATTATATCAT--AC--T-TA-GC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATA-A--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCT
droBia1 scf7180000302292:2022055-2022270 - AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAGTTTCG-AACG-C-------------CTCCCT---CA-GCA-------AGCACCAA-ATACA-ATTACAATTAT-TCAT--AC--T-TA-GC---TCTCAGTCT---ACTTTCCTG---ACCTGA-CTCTATGTGTTCAATCAAAA--------------------------GCCATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCTGCCACTCCAACGCAACCACGCTGGGGCCT
droTak1 scf7180000415795:714193-714405 + AAGCT-TATTAATACA-----AT-----T------------------------TA--CTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCT---CA-ACAAA-----AGCACCAA-ATACA-ATTACAACTATATCAT--AC--T-TA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACTCCAACGCAACCACGCTGGGGCCT
droEug1 scf7180000409672:758144-758355 - AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAATTTCAAAACG-C-------------CTCCCT---CA-ACA-------AACACCAA-ATACA-ATTATATTTATATTAC--AC--T-TA-AC---CCTTGGTCT---ACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAC-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCTACTCCAACGCAAACACGCTGGGGCCT
dm3 chr2R:11847332-11847555 - AAGCT-TATTAATACAATACAAT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCTCTTCAAGCA-------AGCACCAA-ATACAAATTACAATTATATCAT--AC--T-TA-GCCCACCTCAGTCT---TCTTTCCTG---A------CCCTATGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGATGGGGTCT
droSim2 2r:12517422-12517599 - AAGCT-TATTAATACAATACAGT-----T------------------------TA--TTTTGC-------------------AAATTTCA-AACG-C-------------CT-----------------------------------------------------------TA-GCCATCCTTAGTCT---TCTTTCCTG---A------CCCCATGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCT
droSec2 scaffold_1:9347298-9347524 - AAGCT-TATTAATACAATACAAT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCTCTCCA-GCAA------AGCACCAA-ATACA-ATTACAATTATATCAT--AC--T-TA-GCCATCCTTAATCT---TCTTTCCTG---AC-TGA-CCCTATGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCT
droYak3 2R:17134598-17134811 + AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCT--TCA-AC--------AGCACCGAAATACA-ATTACAATTATATCAT--AC--T-TA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCACTCAA-T--------------------------GCAATACACTAT-ATATCGTTCTGACTACAC-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGATCCGCCACGCCAACGCAACCACGCTGGGGCCT
droEre2 scaffold_4845:14010476-14010686 + AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAAT-TCG-AACG-C-------------CTCCCT--TCA-AC--------AGCACCAAAATACA-ACTACAATTATATCAT--AC--T-TA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCACTCAA-T--------------------------GCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCCCGCGCTCGATCCGCCACACCAACGCAACCACGCTGGGGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AAGCT-TATTAATTAA-----CT-----CTACATATTATATACATATTCATTTTC-GTTTTGCCAAAAGAAAAAA----AGAAAATTTTG-AAAAACCTTTCGC------CTAT---------------------GCCAAAATTTA-G-------------AT--ACTTT-TA-AT---CCTCAGTCT--TGGCTTCCTGCTAAC-TCTACTCTATGTGTTCACTCAA-AAA------------------------GCAATATA--ATAACATCGTTCTGACTACAA-------A-AT-----TT--ATAGGTAAACCCGCGCACACGATCCGAAACGCCAACCCAACCACGATGGGGTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACTACA...........................................................................21114.0014131000
...................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGACTACA...........................................................................2518.00880000
.....................................................................................................................................................................................TCAGTCT--TGGCTTCCTGCTAAC-TC.........................................................................................................................................................2417.00770000
.....................................................................................................................................................................................................................................................................ATA--ATAACATCGTTCTGACTACA...........................................................................2316.00660000
..............................................................................................................................................TTTA-G-------------AT--ACTTT-TA-AT---CCT...................................................................................................................................................................................1915.00550000
..................................................................................................................................................................................................................................................................AATATA--ATAACATCGTTCTGACTACA...........................................................................2615.00550000
......................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACTACA...........................................................................2214.00431000
..........................................................................................................................................................................................................................................................................ATAACATCGTTCTGACTACA...........................................................................2014.00440000
...................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGACT..............................................................................2214.00440000
.............................................ATTCATTTTC-GTTTTGCCAAAAG....................................................................................................................................................................................................................................................................................................2314.00440000
..............................................................................................................................................................................AT---CCTCAGTCT--TGGCTTCCTGCTAAC-TC.........................................................................................................................................................2814.00440000
.......................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACTACAA-------...................................................................2213.00330000
..........................................................................A----AGAAAATTTTG-AAAAACC.......................................................................................................................................................................................................................................................................1913.00330000
..............................................TTCATTTTC-GTTTTGCCA........................................................................................................................................................................................................................................................................................................1813.00330000
...........................................................................................................................................................................................................................................................................TAACATCGTTCTGACTACAA-------A-A................................................................2212.00220000
...................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGA................................................................................2012.00220000
.....................................................................................................................................................................................................................................................................ATA--ATAACATCGTTCTGACT..............................................................................2012.00220000
.......................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACT..............................................................................1812.00220000
....................................................................................................................................................................................................................CTATGTGTTCACTCAA-AAA------------------------GCA......................................................................................................2212.00202000
................................................................................................................................................................................................................................................................GCAATATA--ATAACATCGTTCTGACTACA...........................................................................2812.00220000
............................................TATTCATTTTC-GTTTTGCC.........................................................................................................................................................................................................................................................................................................1912.00220000
...........................................................................................................................................................................................................................................................................TAACATCGTTCTGACTACA...........................................................................1912.00220000
...................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGACTACAA-------...................................................................2612.00220000
....................................................................................................................................................................................................................................................................................TCTGACTACAA-------A-AT-----TT--ATAGGT................................................2212.00220000
.......................................ATACATATTCATTTTC-GTT..............................................................................................................................................................................................................................................................................................................1912.00220000
............................................................................................................................................................................................................................................................................AACATCGTTCTGACTACA...........................................................................1812.00220000
.......................................................................................................................................................................................................................................A------------------------GCAATATA--ATAACATCGTTCTGACTACA...........................................................................2912.00220000
.................................TATTATATACATATTCATTTTC-GTT..............................................................................................................................................................................................................................................................................................................2512.00220000
......................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACTACAA-------...................................................................2312.00220000
....................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACTA.............................................................................2212.00220000
........................................................................................................................................................................................GTCT--TGGCTTCCTGCTAAC-TCTACT.....................................................................................................................................................2512.00220000
................................................................................................................AT---------------------GCCAAAATTTA-G-------------AT--ACTTT-TA-...........................................................................................................................................................................................2311.00101000
.............................................ATTCATTTTC-GTTTTGCC.........................................................................................................................................................................................................................................................................................................1811.00110000
......................................................................................TTTG-AAAAACCTTTCGC------CTAT---------------------GCC...............................................................................................................................................................................................................................2411.00110000
......................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACTACAA-------A-.................................................................2411.00110000
....................................................................................................................................................................................................................................................................................................................................CACGATCCGAAACGCCAACCCAACCACG.........2811.00110000
.......................................................................................................................................................................................AGTCT--TGGCTTCCTGCTAAC-TCTACT.....................................................................................................................................................2611.00110000
.......................................................................................................................................................................................................................................................................................................................................GATCCGAAACGCCAACCCAA..............2011.00110000
..................................ATTATATACATATTCATTTTC-GTTTTGCC.........................................................................................................................................................................................................................................................................................................2911.00110000
...........................................ATATTCATTTTC-GTTTTGCC.........................................................................................................................................................................................................................................................................................................2011.00110000
...............................................................................................................................................................................................................................................................................................................................GCGCACACGATCCGAAACGCC.....................2111.00101000
..................................................................................................................................................................................................................................................................AATATA--ATAACATCGTTCTGG................................................................................2111.00110000
..............................................TTCATTTTC-GTTTTGCCAAAAG....................................................................................................................................................................................................................................................................................................2211.00110000
.......................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACG..............................................................................1811.00110000
..................................................................................................................................................................................................................................................................AATATA--ATAACATCGTTCTGA................................................................................2111.00110000
...................................................................................................................................................................................CCTCAGTCT--TGGCTTCCTGCTAAC-TC.........................................................................................................................................................2611.00110000
..................................................................................................................................................................................................................................................................................................................................CACACGATCCGAAACGCC.....................1811.00110000
.......................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACTACAA-------A-.................................................................2311.00110000
....................................................................................................................................................................................................................................................................................TCTGACTACAA-------A-AT-----TT--ATAGGTAAACC...........................................2711.00110000
.....................................................................................................................................................................................TCAGTCT--TGGCTTCCTGCTAAC-TCTACT.....................................................................................................................................................2811.00110000
......................................................................AAAAA----AGAAAATTTTG-AAAAACC.......................................................................................................................................................................................................................................................................2311.00101000
.........................................................................AA----AGAAAATTTTG-AAAAACCTTTCGC------CT.........................................................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................................................................TCCTGCTAAC-TCTACTCTATGTGTTCA..........................................................................................................................................2711.00101000
................................................................................GAAAATTTTG-AAAAACCT......................................................................................................................................................................................................................................................................1811.00110000
....................................TATATACATATTCATTTTC-GTTTTGCCA........................................................................................................................................................................................................................................................................................................2811.00110000
.........................................................................AA----AGAAAATTTTG-AAAAACCT......................................................................................................................................................................................................................................................................2111.00110000
.....................................ATATACATATTCATTTTC-GTTTTGCC.........................................................................................................................................................................................................................................................................................................2611.00110000
....................................................................................ATTTTG-AAAAACCTTTCGC------CTAT---------------------GCC...............................................................................................................................................................................................................................2611.00101000
...............................................TCATTTTC-GTTTTGCCAAAAG....................................................................................................................................................................................................................................................................................................2111.00110000
....................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACTACAA-------...................................................................2511.00101000
....................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACT..............................................................................2111.00110000
..............................................................................................................................................................................AT---CCTCAGTCT--TGGCTTCCTGC................................................................................................................................................................2211.00100001
...............................................................................................................................................................................................................CTACTCTATGTGTTCACTCAA-A...................................................................................................................................2211.00101000
.....................................................................................................................................................................................................................................................................................CTGACTACAA-------A-AT-----TT--ATAGG.................................................2011.00110000
..........................................................................................................................................................................................................................................................................................................................AACCCGCGCACACGATCCGAAACGCCA....................2711.00101000
..........................................................................................................................................................................................................................................................................ATAACATCGTTCTGACTACAA-------A-A................................................................2311.00110000
....................................................................................................................................................................................CTCAGTCT--TGGCTTCCTGCTAAC-TCT........................................................................................................................................................2611.00101000
........................................................................................................................................................................................................................................................................................................AT-----TT--ATAGGTAAACCCGCGCACACG.................................2511.00110000
....................................................................................................................................................................................................................................................................................TCTGACTACAA-------A-AT-----TT--ATAGGTAAACCCG.........................................2911.00110000
..............................................................................................................................................................................................................................................................................................................................CGCGCACACGATCCGAAACGCC.....................2211.00100001
................................................................AAAAGAAAAAA----AGAAAATTTTG-AAAAACC.......................................................................................................................................................................................................................................................................2911.00110000
......................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACT..............................................................................1911.00110000
....................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACTACA...........................................................................2411.00110000
.........................................ACATATTCATTTTC-GTTTTGCCAA.......................................................................................................................................................................................................................................................................................................2411.00101000
..................................................................................................................................................................................................................................................................................................................................CACACGATCCGAAACGCCAACCCAACCA...........2811.00100100
.............................................ATTCATTTTC-GTTTTGCCAAAAGAAA.................................................................................................................................................................................................................................................................................................2611.00110000
............................................TATTCATTTTC-GTTTTGCCAAAAG....................................................................................................................................................................................................................................................................................................2411.00110000
droVir3
AAGCC-TATT---TCA-----AATATATT------------------------TACTTATTG-------------TTTGCGCAAATTT-A-AACG-C-------------CCCCCT---AA-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCCCG---A------CTCTATGTGTTCATTCAA-A--------------------------TAAA--CA--ATAATATCGTTCTGACTACAA-------AAAC-----TT--ATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGATGGGGCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCA..........................................................................................................................................2415.005004000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACA...........................................................................2015.005005000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATCGTTCTGACTACAA-------AAAC-----T.........................................................2113.003000000000000000003000000000000000000000000000000000000000000000
.....................................................................................................................................................................AT--T-TATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2613.003002000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A--------------------------TAAA--CA--ATAATATCGTTCTGACTACA...........................................................................2713.003002000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCAA-A--------------------------TAAA--CA--...............................................................................................2813.003003000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................A-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................2913.003003000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCC......................2113.003101000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCCCAACGCA...............2813.003003000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGT.............................................................................................................................................2112.002000000000000000001100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCGCTCTGAAACCCCAACGCAACC............2512.002002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AAA--CA--ATAATATCGTTCTGAC...............................................................................2112.002000000000000000000110000000000000000000000000000000000000000000
.........................................................................................................................................................................T-TATGC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAAA--CA--ATAATATCGTTCTGACTACA...........................................................................2612.002001000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AATATCGTTCTGACTACAA-------AAAC-----..........................................................2312.002001000000000000000010000000000000000000000000000000000000000000
.........................................................TATTG-------------TTTGCGCAAATTT-A-AACG-C-------------CC.........................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AT--T-TATGC---TCTAAGTCAA--ACT.......................................................................................................................................................................2112.002001000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................A-A--------------------------TAAA--CA--ATAATATCGTTCTGACT..............................................................................2512.002001000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CCCGCGCGCTCGCTCTGAAACCCC.....................2412.002000000000000000001100000000000000000000000000000000000000000000
................................................................................................................................................................................................CTTTCCCG---A------CTCTATGTGTTCATTC.......................................................................................................................................2512.002000000000000000001000100000000000000000000000000000000000000000
...........................................................................................AACG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................A--ATAATATCGTTCTGACTACA...........................................................................2112.002001000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACC.......................2012.002100000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................AT--AT--T-TATGC---TCTAAGTCA.............................................................................................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTTAACCCGCGCGCTCGCT...............................1912.002001000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTCCCG---A------CTCTATGTGTTCATTCA......................................................................................................................................2412.002001000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACAA-------AAAC-----T.........................................................2612.002001000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................G---A------CTCTATGTGTTCATTCA......................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................ACG-C-------------CCCCCT---AA-AC---------GCACCA..............................................................................................................................................................................................................................2012.002001000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................A------CTCTATGTGTTCATTCAA-A--------------------------TAAA--CA--...............................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................TTGCGCAAATTT-A-AACG-C-------------CCCCCT---AA-AC---------....................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................TACTTATTG-------------TTTGCGCAAATTT-A-AAC...........................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................C---------GCACCAA-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCCCG---A------CTCT...................................................................................................................................................4311.001000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CT.....................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................A-------------------AT--AT--T-TATGC---TCTAAGTCA.............................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ATAGGTTAACCCGCGCGCT...................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCCC.....................2211.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CTATGTGTTCATTCAA-A--------------------------TAAA--CA--A..............................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................A-A-------------------AT--AT--T-TATGC---TCTAAGTCA.............................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CTCTATGT...............................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGACTA.............................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TATGTGTTCATTCAA-A--------------------------TAAA--CA--ATAATATCGTTCTGACTACAA-------AAAC-----T.........................................................4811.001000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................CTCGCTCTGAAACCCCAACG.................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CT---AA-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---T.....................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................C---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCCCG---A------CTCTATGTGTTCA..........................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................T--T-TATGC---TCTAAGTCAA--ACT.......................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................T--AT--T-TATGC---TCTAAGTCAA--..........................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GGTTAACCCGCGCGCTCGCTCT.............................2211.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................T---AA-AC---------GCACCAA-A-------------------AT--AT--T-TATG..........................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................CCAA-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--AC........................................................................................................................................................................2711.001000000000000000000010000000000000000000000000000000000000000000
.............................................................G-------------TTTGCGCAAATTT-A-AACG-C-------------CC.........................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................ACG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCCCG---A------CTCTATGTGTTCATTCAA-....................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCTGG...........................2011.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TATGTGTTCATTCAA-A--------------------------TAAA--CA--ATA............................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CAACGCAACCACGATGGGGC..2011.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................T---AA-AC---------GCACCAA-A-------------------AT--AT--T-T.............................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CTCTATGTGT.............................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATCGTTCTGACTACAA-------AAA................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAAA--CA--ATAATATCGTTCTGAC...............................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.........................................................TATTG-------------TTTGCGCAAATTT-A-AA............................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................T--T-TATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCATTC.......................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AACCCCAACGCAACCACGA........1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAAA--CA--ATAATATCGTTCTGA................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCA......................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................T--AT--T-TATGC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AA-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--ACTTTC....................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................A-A--------------------------TAAA--CA--ATAATATCGTTCTGACTACA...........................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ACCCGCGCGCTCGCTCTG............................1811.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ATATCGTTCTGACTACAA-------AA.................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................G---A------CTCTATGTGTTCATTCAA-A--------------------------TA.......................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCGCGCTCGCTCTGAAACC.......................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCTGAAACCCCAACGCAACC............2911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGA................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTGTTCATTCAA-A--------------------------TAAA--CA--...............................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TAACCCGCGCGCTCGCTCTGA...........................2111.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................AACG-C-------------CCCCCT---AA-AC---------GCACCA..............................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................A-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---T.....................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................A-------------------AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
........................ATATT------------------------TACTTATTG-------------TTTGCGCAAATTT-A-A.............................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CTCTATGTGTTCATTCAA-A--------------------------TAAA--CA--AT.............................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................CTTTCCCG---A------CTCTATGTGTTCATTCA......................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AATATCGTTCTGACTACAA-------AAAC-----T.........................................................2411.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AATATCGTTCTGACTACAA-------AA.................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AAA--CA--ATAATATCGTTCTGACTACA...........................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CTATGTGTTCATTCAA-A--------------------------TAA......................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................CG-C-------------CCCCCT---AA-AC---------GCACCAA-............................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................ACCAA-A-------------------AT--AT--T-TATGC---TCTAAGTCA.............................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
.......................TATATT------------------------TACTTATTG-------------TTTGCGCA......................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................A-------------------AT--AT--T-TATGC---TCTAAGTCAA--..........................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTCCCG---A------CTCTATGTGTTCA..........................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TAACCCGCGCGCTCGCTCTGAAACCC......................2611.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTGAAACCCCAACGCAACCA...........2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................TTG-------------TTTGCGCAAATTT-A-AACG-C-------------CC.........................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGCTCTGAAACCCCAACGC................2011.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGACTACAA-------A..................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AA-A--------------------------TAAA--CA--ATAATATCGTTCTGACT..............................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................TTT-A-AACG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCTGAAACCCCAAC..................2211.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................T--AT--T-TATGC---TCTAAGTCAA--AC........................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CCG---A------CTCTATGTGTTCATTCAA-A--------------------------.........................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACAA-------AAAC-----..........................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AATATCGTTCTGACTACA...........................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................T---AA-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---TCTA..................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCCCA....................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................T--AT--T-TATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ATAGGTTAACCCGCGCGCTCG.................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................A-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---TCTAAGT...............................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................AT--AT--T-TATGC---TCTAAGTCAA--ACTTTCCC..................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................G---A------CTCTATGTGTTCATTCAA-A--------------------------TAAA--CA--AT.............................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AA-A-------------------AT--AT--T-TATGC---TCTAAGTCAA--AC........................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCATTCAA-....................................................................................................................................2911.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................TGC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACGCAACCACGATGGGGCCA2011.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................CAA--ACTTTCCCG---A------CTCTATGTGT.............................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................AAGTCAA--ACTTTCCCG---A------CTCTATGT...............................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TATCGTTCTGACTACAA-------AA.................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................A-------AAAC-----TT--ATAGGTTAACCCGC........................................2111.001000000000000000010000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGTCAA--ACTTTCCCG---A------CTCTATGTGTTCA..........................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCTCTGAAACCCCAACGCAACC............2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................TGCGCAAATTT-A-AACG-C-------------CCC........................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CCT---AA-AC---------GCACCAA-A-------------------AT--AT--T-T.............................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................CG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................AATATATT------------------------TACTTATTG-------------TTTGCGC.......................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TAATATCGTTCTGACTACAA-------AA.................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................AT--T-TATGC---TCTAAGTCAA--ACTTTCC...................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................A--ATAATATCGTTCTGACTACAA-------A..................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTC...........................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................A-AACG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GACTACAA-------AAAC-----TT--ATAGGTTAACCC..........................................2611.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTC.......................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CCAA-A-------------------AT--AT--T-TATGC---TCT...................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGTTCTGACTACAA-------AAAC-----TT--ATAGGT................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................A-------AAAC-----TT--ATAGGTTAACCCGCG.......................................2211.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ATGTGTTCATTCAA-A--------------------------TAAA--CA--ATAAT..........................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCATTCA......................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................G-------------TTTGCGCAAATTT-A-AACG-C-------------C..........................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGACTACAA-------AAA................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ACTTTCCCG---A------CTCTATGTGTTCA..........................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................T-A-AACG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................ATTG-------------TTTGCGCAAATTT-A-AACG-C-------------CCCC.......................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................A-A--------------------------TAAA--CA--ATAATATCGTTC...................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCAA--ACTTTCCCG---A------CTCTAT.................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................A-AACG-C-------------CCCCCT---AA-AC---------GCACCA..............................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CAA--ACTTTCCCG---A------CTCTATGTGTT............................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTAACCCGCGCGCTCGCTCTGA...........................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACG...........................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TCTATGTGTTCATTCAA-A--------------------------TAAA--CA--...............................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TCTGACTACAA-------AAAC-----TT--ATAGGTT...............................................2411.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AACGCAACCACGATGGGGCCA2111.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AAA--CA--ATAATATCGTTCTG.................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................ATTG-------------TTTGCGCAAATTT-A-AA............................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTTCTGACTACAA-------AAAC-----TT--A.....................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................T--AT--T-TATGC---TCTAAGTCAA--ACTTTCCCG---..............................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
AAGCC-TATT---TCA-----AATATA..............................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........................ATT------------------------TACTTATTG-------------TTTGCGCAAA....................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTCAA-A--------------------------TAAA--CA--ATAATATCGTTCTG.................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.........................TATT------------------------TACTTATTG-------------TTTGCGCA......................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................CT---AA-AC---------GCACCAA-A-------------------AT--AT--T-TATGC---TC....................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CTCT...................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................G---A------CTCTATGTGTTCATTC.......................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................T--AT--T-TATGC---TCTAAGTCAA--A.........................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................................................ATTG-------------TTTGCGCAAATTT-A-AACG-C-------------CCC........................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................AC---------GCACCAA-A-------------------AT--AT--T-TATGC---TCTAAGTCA.............................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................TATTG-------------TTTGCGCAAATTT-A-AACG-C-------------CCC........................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................AT--AT--T-TATGC---TCTAAGTCAA--AC........................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...........................TT------------------------TACTTATTG-------------TTTGCGCAAATT..................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCAA-A--------------------------TA.......................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCTGAAACCC......................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TGAAACCCCAACGCAACCA...........1911.001001000000000000000000000000000000000000000000000000000000000000
..........................ATT------------------------TACTTATTG-------------TTTGCGCA......................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCGCGCGCTCGCTCTGAAACCCCA....................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ATAGGTTAACCCGCGCGCTCGCT...............................2311.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACAA-------AA.................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................TT-A-AACG-C-------------CCCCCT---AA-AC---------GCACC...............................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CTATGTGTTCATTCAA-A--------------------------TA.......................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTCCCG---A------CTCTATGTGTTCATTCAA-....................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AACCCCAACGCAACCACGATGG.....2211.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................TGCGCAAATTT-A-AACG-C-------------CCCCC......................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T--ATAGGTTAACCCGCGCGCTC..................................2111.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCTGA...........................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ATGTGTTCATTCAA-A--------------------------TAAA--C..................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CTATGTGTTCATTCAA-A--------------------------TAAA--CA--...............................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTAAGTCAA--ACTTTCCCG---A------CTC....................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................A-A-------------------AT--AT--T-TATGC---TCTAAGT...............................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AA--ACTTTCCCG---A------CTCTATGTGTTCATT........................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................T---AA-AC---------GCACCAA-A-------------------AT--AT--T-TA............................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................AA-A-------------------AT--AT--T-TATGC---TCTAAGTCA.............................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.....................AATATATT------------------------TACTTATTG-------------TTTGCGCA......................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................TT------------------------TACTTATTG-------------TTTGCGCA......................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCTCTGAAACCCCAACGCAACCA...........2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCGCGCTCGCTCTGAAACCCCAACGCAAC.............2911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTTCCCG---A------CTCTATGTGTTCA..........................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACAA-------AAAC-----TT--A.....................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TAATATCGTTCTGACTACA...........................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AC---------GCACCAA-A-------------------AT--AT--T-TATGC---T.....................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CTCTGAAACCCCAACGCAACC............2111.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
AAGCT-TATT---TCA-----ATTATATT-------TATATACATATT-ATA-TA--C--TC-------------TTTGCGCAAATTT-A-AACG-C-------------CTCCCT---CT-AAA-------TGCATCAA-AATT--------------------AT--T-TATGC---TCTAAGTCT---ACTTTCCCG---A------CTCTATGTGTTCATTCAA-A--------------------------TAAAT--T--ATAATATCGTTCTGACTACAAAAATAAAA-AC-----TTATATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGCTGGGGCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................T--ATAATATCGTTCTGACTACA...........................................................................2112.002200000
...........................................................................................................................................A-AATT--------------------AT--T-TATGC---TCTAAGTCT---..........................................................................................................................................................................2212.002200000
..........................................CATATT-ATA-TA--C--TC-------------TTTGCGCA......................................................................................................................................................................................................................................................................................2211.001000001
..............................................................................................................................................................................................................................................................................TATCGTTCTGACTACAAAAATAAA...................................................................2411.001000001
......................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCAA-A--------------------------TAAAT--T--A..............................................................................................2911.001100000
...................................................................................................................................................................................................................................................................................................AAAA-AC-----TTATATAGGTTAACCCGCGCGCT...................................2911.001100000
..................................................................................................................................................................................................................................................................AAT--T--ATAATATCGTTCTGACTACAAAAA.......................................................................2811.001100000
................................................................................................................................................................................................................................................................................TCGTTCTGACTACAAAAATAA....................................................................2111.001100000
....................................................................................................................................................................................................................................................................T--T--ATAATATCGTTCTGACT..............................................................................1911.001100000
.........................................................C--TC-------------TTTGCGCAAATTT-A-AACG-C-------------CTCCCT---C.................................................................................................................................................................................................................................................2911.001100000
......................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTC.......................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................AAT--T--ATAATATCGTTCTGAC...............................................................................2011.001100000
.............................................ATT-ATA-TA--C--TC-------------TTTGCGCAAA....................................................................................................................................................................................................................................................................................2111.001000100
....................................................................................................................................................................................................................................................................................TCTGACTACAAAAATAAAA-AC-----..........................................................2111.001100000
droGri2
AAGCT-TATT---TCA-----ATTATCTT-------AAT--ATATATA--AA-TA--T--TG-------------TTTGCGCAAATTT-A-AACG-C-------------CTCCCC---AA-AC---------GCACCAA-A-------------------AT--AC--T-TATGC---TCTAAGTCA---ACTTGCCCG---A------CTCTATGTGTTCATTCAA-AGATCAAAAAAGAAAGAAGAAAAA---TAAA--CA--ATAATTTCGTTCTGACTACACTTACA-AA-AC-----TTATATAGGTTAACCCTCGAGCTCGCTCTGAAACTCCATCGCAACCACGCTGGGGCCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................TCGTTCTGACTACACTTACA-....................................................................2011.00110
.........................................................................................................................................................................T-TATGC---TCTAAGTCA---ACTTGCCCG---..............................................................................................................................................................2411.00110
............................................................................................................................................................................ATGC---TCTAAGTCA---ACTTGCCCG---A------CT.....................................................................................................................................................2511.00110
dp5
AAGCT-TATTAAT----------TAT------------TAAACATATA--AA-TA--TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------CA-ACAAAATACCAACACCAA-ATATA-ATTATAG---------------------TTAATTACAGTCA---ACTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAA-A--------------------------GCAATATA-----ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCAACGCCAACGCAACCTCGCTGGGGCCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................AATTTCG-AACG-C-------------A-C------CA-ACA............................................................................................................................................................................................................................................1912.0020000020000
..........................................................TTTGC-------------------AAATTTCG-AACG-C-------------A-C------CA-ACA............................................................................................................................................................................................................................................2512.0020200000000
...................................................A-TA--TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------C.................................................................................................................................................................................................................................................2512.0020002000000
...................................................................................AATTTCG-AACG-C-------------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2612.0020101000000
.....................................................................................TTTCG-AACG-C-------------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2412.0020101000000
.......................................................................................................................................................................................AGTCA---ACTTTCCTG---AC-TCT-.......................................................................................................................................................1912.0020200000000
................................................................................................................................................................................................CTTTCCTG---AC-TCT-CTCTATGTGTT............................................................................................................................................2412.0020000002000
..........................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCCG............................1911.0010100000000
........................................................................................................................................................................................................................................................................................................AC-----TT--ATAGGTAAACCCGCGCGCTCGCTC..............................2811.0010001000000
....................................................................................................................................................................................................................................................................TATA-----ATATCGTTCTGACTACA...........................................................................2111.0010001000000
.........................................................TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------CA-...............................................................................................................................................................................................................................................2311.0011000000000
............................................................................................................................................................................................................................................................................................................................................GCAACGCCAACGCAACCTCGCTGGGGCC.2811.0010001000000
...................................................................................................................................................ATTATAG---------------------TTAATTACAGTCA---ACTTTCC...................................................................................................................................................................2711.0010001000000
..........................................................TTTGC-------------------AAATTTCG-AACG-C-------------A-C------CA-...............................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................TTCAA-A--------------------------GCAATATA-----ATATCGTTCC..................................................................................2411.0010001000000
..........................................................TTTGC-------------------AAATTTCG-AACG-C-------------A-C------C.................................................................................................................................................................................................................................................2111.0010000010000
............................................................TGC-------------------AAATTTCG-AACG-C-------------A-C------CA-ACA............................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................................CATTCAA-A--------------------------GCAATATA-----ATATCGTTCTGAC...............................................................................2911.0010001000000
...............................................................................................................................................................................................................................................................................................................................................ACGCCAACGCAACCTCGCTGGGGCC.2511.0010001000000
...................................................................................................................................................ATTATAG---------------------TTAATTACAGTC..............................................................................................................................................................................1911.0010000010000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCC.....................2211.0010001000000
................................................................................................................................................................................................................................TCAA-A--------------------------GCAATATA-----ATATCGTTCTG.................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCCAACGCA...............2811.0010001000000
...................................................................................................................................................................................................................................................................ATATA-----ATATCGTTCTGACTACAA-------...................................................................2311.0010100000000
.......................................................................................................................................................TAG---------------------TTAATTACAGTCA---ACTTTCCT..................................................................................................................................................................2411.0010001000000
...........................................................................................AACG-C-------------A-C------CA-ACAAAATACCAACACC...............................................................................................................................................................................................................................2511.0010001000000
......................................................A--TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------C.................................................................................................................................................................................................................................................2311.0010001000000
................................................................................................................................................................................................................................................................................TCGTTCTGACTACAA-------A-AC-----T.........................................................1911.0010001000000
..................................................................................................................................................................................................................................................................................................................................CGCTCGCTCCGCAACGCCAACGCAACCTC..........2911.0010001000000
....................................................................................ATTTCG-AACG-C-------------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................................................................................................................................................................................................TAGGTAAACCCGCGCGCTCGCT...............................2211.0010000001000
..............................................................................................................................................................................................................................ATTCAA-A--------------------------GCAATATA-----ATATCGTTCTG.................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCCGCAAC........................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................ACGCAACCTCGCTGGGGCC.1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCCGCAACGCCAAC..................2211.0010001000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCCAAC..................2511.0010001000000
.................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCCGCAACGCCAACG.................2311.0010001000000
.........................T------------TAAACATATA--AA-TA--TTTTGC-------------------A......................................................................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................GCTCGCTCCGCAACGCCAACG.................2111.0010100000000
.....................................................................................................................................................................................................................................................................ATA-----ATATCGTTCTGACTACAA-------A-AC-----T.........................................................2511.0010001000000
............................................................TGC-------------------AAATTTCG-AACG-C-------------A-C------CA-...............................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................A-ATTATAG---------------------TTAATTACAGTCA---ACTTTCC...................................................................................................................................................................2811.0010001000000
...............................................................................................................................................................................................................................TTCAA-A--------------------------GCAATATA-----ATATCGTTCTGACT..............................................................................2811.0010001000000
...............................................................................................................................................................................................................CT-CTCTATGTGTTCATTCAA-A--------------------------GC.......................................................................................................2311.0010001000000
..........................................................................................................................................................................................................................................................................................TACAA-------A-AC-----TT--ATAGGTAAACC...........................................2111.0010001000000
.....................................................................................TTTCG-AACG-C-------------A-C------CA-ACAAAATA.......................................................................................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................................CTCTATGTGTTCATTCAA-A--------------------------GC.......................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................ATCGTTCTGACTACAA-------A-AC-----TT--......................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................ATATCGTTCTGACTACAA-------A-.................................................................1911.0010100000000
.............................................ATA--AA-TA--TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------C.................................................................................................................................................................................................................................................2911.0010001000000
...................................................................................................................................................................................................................................A-A--------------------------GCAATATA-----ATATCGTTCTGACTACA...........................................................................2711.0010100000000
.....................................................................................................................................................................................................................................A--------------------------GCAATATA-----ATATCGTTCTGACT..............................................................................2311.0010100000000
................................................................................................C-------------A-C------CA-ACAAAATACCAACACCAA-ATA.........................................................................................................................................................................................................................2611.0010001000000
......................................................................................TTCG-AACG-C-------------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................................................................................TTCTGACTACAA-------A-AC-----TT--ATAG..................................................2111.0011000000000
............................................................................................................................................................................................................................................................................................................................................GCAACGCCAACGCAACCTCGCTGGGGCCT2911.0010001000000
........................................................................................CG-AACG-C-------------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2111.0010100000000
...................................................................................AATTTCG-AACG-C-------------A-C------CA-ACAA...........................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCAACGCC.....................2011.0010100000000
...............................................A--AA-TA--TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------CA-...............................................................................................................................................................................................................................................2811.0010100000000
.........................................................TTTTGC-------------------AAATTTCG-AACG-C-------------A-C------C.................................................................................................................................................................................................................................................2211.0010001000000
..................................................................................................................................................................................................................................AA-A--------------------------GCAATATA-----ATATCGTTCT..................................................................................2111.0010000010000
...............................................................................................................................................................................................................................................................................ATCGTTCTGACTACAA-------A-AC-----TT--A.....................................................2211.0010100000000
....................................................................................................................................AACACCAA-ATATA-ATTATAG---------------------T.........................................................................................................................................................................................2111.0010001000000
droPer2
AAGCT-TATTAAT----------TAT------------TAAACATATA--AA-TA--TTTTGC-------------------AAATTTCA-AACG-C-------------A-C------CA-ACAAAATACCAACACCAA-ATATA-ATTATAG---------------------TTAATTACAGTCA---ACTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAA-A--------------------------GCAATATA-----ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCACAACGCCAACGCAACCTCGCTGGGGCCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................CTCCACAACGCCAACGCAACCT...........2211.001010000
...........................................................................................AACG-C-------------A-C------CA-ACAAAATACCAACACC...............................................................................................................................................................................................................................2511.001010000
........................................................................................................................................................................................GTCA---ACTTTCCTG---AC-TCT-CTCT...................................................................................................................................................2211.001010000
.......................................................................................TCA-AACG-C-------------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2211.001010000
.....................................................................................................................................................................................ACAGTCA---ACTTTCCTG---AC-TCT-CTCTATGT...............................................................................................................................................2911.001010000
.......................................................................................................................................................................................................................................................................A-----ATATCGTTCTGACTACAA-------A-AC-----TT--A.....................................................2511.001010000
.................................................................................................................................................A-ATTATAG---------------------TTAATTACAGTCA---AC........................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................G---AC-TCT-CTCTATGTGTTCATTCAA-A--------------------------.........................................................................................................2511.001010000
..................................................................................................................................................................................................................CTCTATGTGTTCATTCAA-A--------------------------G........................................................................................................2011.001000100
................................................................................................................................................................................................................................................................................TCGTTCTGACTACAA-------A-AC-----T.........................................................1911.001010000
.........................................................................................................................................................................................TCA---ACTTTCCTG---AC-TCT-CTC....................................................................................................................................................2011.001010000
..............................................................................................................................................................................................................................................................................................A-------A-AC-----TT--ATAGGTAAACCCGCG.......................................2111.001000100
........................................................................................................................................................AG---------------------TTAATTACAGTCA---ACTTTCCTG---AC-T..........................................................................................................................................................2711.001010000
...............................................................................................................................................................................................ACTTTCCTG---AC-TCT-CTCTATGTGTTC...........................................................................................................................................2611.001010000
......................................................................................................................................................................................................TG---AC-TCT-CTCTATGTGTTCA..........................................................................................................................................2011.001010000
..........................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCCACA..........................2111.001010000
droAna3
ATGCT-TGTTAACACAAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTCT---ATTTTCCTG---A------C--TATGTGTTCATTAAA-AA--TT---------------ATTTATGCA----T--AT-ATATCCTTCTGACTCCAA-------C-CA--TCCCA--ATAGGCAATCCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................TTCG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................2416.006300003
............................A------------------------CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................2016.006000006
..........................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCACGCC.....................2616.006600000
...................................................................................................................................................AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTCT---..........................................................................................................................................................................2715.005100004
................AAA---C-----A------------------------CA--CTTTGCCAGAC------------TCG......................................................................................................................................................................................................................................................................................2115.005000005
..........................................................................................................................................................ATACATCGA--GC--T-TA-GC---CCTCA.................................................................................................................................................................................2115.005100004
...................................................................................................................................................AT-----ATACATCGA--GC--T-TA-GC---CCTCA.................................................................................................................................................................................2314.004000004
.................AA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................2314.004000004
..........................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCA.........................2214.004400000
...................................................................................................................................................AT-----ATACATCGA--GC--T-TA-GC---CCT...................................................................................................................................................................................2114.004100012
......................C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................2513.003000003
...........................................................................................AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................2013.003300000
.....................................................CA--CTTTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................2313.003000003
...........................................................TTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................1913.003000003
...........................................................TTGCCAGAC------------TCGAATTTCG-AA............................................................................................................................................................................................................................................................................2113.003000003
.......................................................................................TCG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................2313.003200001
............................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCA.........................2013.003300000
...........................................................................................................................................................TACATCGA--GC--T-TA-GC---CCTCA.................................................................................................................................................................................2013.003100002
..........................................................TTTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................2013.003000003
..............CAAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................2613.003000003
.....................................................CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................1912.002000101
................................................................................................................................................................................................................................................................................................................A--ATAGGCAATCCCTCGCGCTCGCTCCG............................2712.002200000
..............................................................................................................................................................................................................................................................................................................................CTCGCGCTCGCTCCGCCACGCC.....................2212.002100001
...........................................................................................................................................................................................................................................................TTTATGCA----T--AT-ATATCCTTCTGACTC.............................................................................2612.002000002
................AAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTT.................................................................................................................................................................................................................................................................................2612.002000002
...............................................................................................................................................................................................................................................................................................................................TCGCGCTCGCTCCGCCACGCC.....................2112.002200000
.........................................................CTTTGCCAGAC------------TCGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2412.002000002
..................A---C-----A------------------------CA--CTTTGCCAGAC------------TCG......................................................................................................................................................................................................................................................................................1912.002200000
.....................................................................................................................................................................................................CTG---A------C--TATGTGTTCATTAAA-AA--................................................................................................................................2212.002000002
...................................................................................AATTTCG-AACT-C-------------TTCCCG---CA-...............................................................................................................................................................................................................................................2012.002200000
.....................................................................................TTTCG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................2512.002000002
.....................................................CA--CTTTGCCAGAC------------TCGAATT..................................................................................................................................................................................................................................................................................2012.002000002
...........................................................TTGCCAGAC------------TCGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2212.002000002
..........................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCC..........................2112.002200000
...........................................................................................................................................................TACATCGA--GC--T-TA-GC---CCTCAGTCT---..........................................................................................................................................................................2412.002100001
..........................................................................................................................................................ATACATCGA--GC--T-TA-GC---CCT...................................................................................................................................................................................1912.002000002
..................A---C-----A------------------------CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................2212.002000002
...................................................................................................................................................................................................................................................................................................................ATAGGCAATCCCTCGCGCTCGCTCCGCC..........................2812.002200000
......................C-----A------------------------CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................2112.002000002
.......................................................................................................................................................................................................................................................................T--AT-ATATCCTTCTGACTCCAA-------C-C................................................................2312.002100001
...........................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACG.......................2311.001100000
...................................................................................................................................................................................................................................................................................................................ATAGGCAATCCCTCGCGCTCGCTCC.............................2511.001000001
...........................................................................................................................................................TACATCGA--GC--T-TA-GC---CCTCAGTCT---AT........................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGCCAACG.................2911.001100000
......................................................................................................................................................................................................TG---A------C--TATGTGTTCATTAAA-AA--................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................CAATCCCTCGCGCTCGCTCC.............................2011.001100000
..................A---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTTC................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGCCA....................2611.001100000
......................................................................................................................................................................................................................................................................................................................GGCAATCCCTCGCGCTCGCTCC.............................2211.001100000
.........................................................................................................................................................................................................................................................................................................A--TCCCA--ATAGGCAATCCCTCGCGCT...................................2511.001100000
............................A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2711.001000001
............................................................TGCCAGAC------------TCGAATTTCG-AA............................................................................................................................................................................................................................................................................2011.001000001
...........................................................TTGCCAGAC------------TCGAATTTCG-AACT-.........................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................................................................................................................................................................................................AGGCAATCCCTCGCGCTCGCTCCGCCAC........................2811.001100000
................................................................................................................................................................................................................................................................................................................A--ATAGGCAATCCCTCGCGCT...................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................CTCGCGCTCGCTCCGCCACGCCAACG.................2611.001000001
...............AAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAA....................................................................................................................................................................................................................................................................................2411.001000001
......................................................................................TTCG-AACT-C-------------TTCCCG---CA-ACC-------A....................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................TAGGCAATCCCTCGCGCTCGCT...............................2211.001100000
............................A------------------------CA--CTTTGCCAGAC------------TCGAATT..................................................................................................................................................................................................................................................................................2111.001000001
................AAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAAT...................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................................................................................................................................................................................................................CTCCAA-------C-CA--TCCCA--ATAGGCAATCCC..........................................2611.001000001
................................................................................................................CCCG---CA-ACC-------AGCA-----------AT-----ATACATCG.......................................................................................................................................................................................................2311.001100000
....................................................................................................................................................T-----ATACATCGA--GC--T-TA-GC---CCTC..................................................................................................................................................................................2111.001000001
.............ACAAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATT..................................................................................................................................................................................................................................................................................2811.001100000
..................................................................................GAATTTCG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................2811.001000001
.............................................................................................................................................................................................................................................................................................................................CCTCGCGCTCGCTCCGCCACGCCAACG.................2711.001100000
.......................................................................................................................CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-TA-GC---......................................................................................................................................................................................2711.001100000
.....................................................CA--CTTTGCCAGAC------------TCGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2611.001000001
........................................................................................................................A-ACC-------AGCA-----------AT-----ATACATCGA--GC--................................................................................................................................................................................................2111.001000001
..................................................................................................................CG---CA-ACC-------AGCA-----------AT-----ATACATCG.......................................................................................................................................................................................................2111.001000001
.................................................................GAC------------TCGAATTTCG-AACT-C-------------TTCCCG---CA-...............................................................................................................................................................................................................................................2611.001100000
................AAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATT..................................................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................TCGA--GC--T-TA-GC---CCTCAGTC..............................................................................................................................................................................1911.001100000
..........................................................TTTGCCAGAC------------TCGAATTTCG-AACT-.........................................................................................................................................................................................................................................................................2411.001000001
...........................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCA.........................2111.001100000
...............................................................................................................TCCCG---CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-T.............................................................................................................................................................................................2911.001000010
.........................................................................................G-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGC......................1911.001100000
..............................................................................................................................................................................................................................................................ATGCA----T--AT-ATATCCTTCTGACTCCAA-------C-C................................................................2811.001100000
............................................................TGCCAGAC------------TCGAATTTCG-A.............................................................................................................................................................................................................................................................................1911.001000001
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCAACGCAAC.............2811.001100000
.................AA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................2711.001000001
................................................................................................................CCCG---CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-..............................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................ACGCCAACGCAACCCCGTTGGGGGCT2611.001000001
............................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCACGCCA....................2511.001100000
...........................................................................................................................................................TACATCGA--GC--T-TA-GC---CCTCAGTC..............................................................................................................................................................................2311.001000001
.................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCCGCCACGCCAACGCA...............2511.001100000
...................................................................................................................G---CA-ACC-------AGCA-----------AT-----ATACATCG.......................................................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGCC.....................2511.001100000
............................................................TGCCAGAC------------TCGAATTTCG-AACT-.........................................................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCACGC......................2511.001100000
................AAA---C-----A------------------------CA--CTTTGCCAGAC------------.........................................................................................................................................................................................................................................................................................1811.001100000
......................................................A--CTTTGCCAGAC------------TCGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------AT-----A..............................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................AATCCCTCGCGCTCGCTCCGCC..........................2211.001100000
.............................................................................................................................................................CATCGA--GC--T-TA-GC---CCTCAGTCT---..........................................................................................................................................................................2211.001000001
....................................................................................................................................................T-----ATACATCGA--GC--T-TA-GC---CCTCA.................................................................................................................................................................................2211.001000001
..................................................................................................................................................................................................................................................................................CTTCTGACTCCAA-------C-CA--TCCC.........................................................2011.001000001
.....................................................................................TTTCG-AACT-C-------------TTCCCG---CA-AC.............................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................GA--GC--T-TA-GC---CCTCAGTCT---ATTTTCCTG---..............................................................................................................................................................2711.001100000
...................................................................................................................................................AT-----ATACATCGA--GC--T-TA-GC---CCTCAGT...............................................................................................................................................................................2511.001000001
...............AAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATT..................................................................................................................................................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................................................................................................TCCCA--ATAGGCAATCCCTCGCGCT...................................2411.001100000
.............................................................................................................................................................................................................................................................................................................CCCA--ATAGGCAATCCCTCGCGCT...................................2311.001100000
..............................................................................................................................................................................................................................................................................................................................CTCGCGCTCGCTCCGCCACGCCAAC..................2511.001000001
................................................................................................................................................................................................................................................................................................................A--ATAGGCAATCCCTCGCGC....................................1911.001000001
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCA....................2111.001100000
............................................................TGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................1811.001000001
.....................................................................................................................................................................................................................................................................................................................AGGCAATCCCTCGCGCTCGCTCC.............................2311.001000001
.....................................................CA--CTTTGCCAGAC------------TCGAATTT.................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCAACGCA...............2611.001100000
............................................................................................ACT-C-------------TTCCCG---CA-ACC-------AGCA-----------......................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................AGGCAATCCCTCGCGCTCGCTCCGCCA.........................2711.001100000
...............................................................................................................................................................TCGA--GC--T-TA-GC---CCTCAGTCT---..........................................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCACGC......................2311.001100000
.....................................................CA--CTTTGCCAGAC------------TCGAATTTCG-AA............................................................................................................................................................................................................................................................................2511.001000001
........................................................................................CG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------AT-----A..............................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCACGCCA....................2711.001100000
................................................................................................................................................................CGA--GC--T-TA-GC---CCTCAGTCT---ATTTTCCT..................................................................................................................................................................2711.001000001
.....................................................................................................................................GCA-----------AT-----ATACATCGA--GC--T-TA-GC---CCTCA.................................................................................................................................................................................2611.001000001
.........................................................CTTTGCCAGAC------------TCGAATTTC................................................................................................................................................................................................................................................................................2011.001000001
.................AA---C-----A------------------------CA--CTTTGCCAGAC------------TC.......................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCAAC..................2311.001000001
..................................................................................GAATTTCG-AACT-C-------------TTCCCG---CA-...............................................................................................................................................................................................................................................2111.001100000
.....................................................CA--CTTTGCCAGAC------------TCGAATTTCG-A.............................................................................................................................................................................................................................................................................2411.001000001
.............................................................................................................................................................................................................................................................................................................................CCTCGCGCTCGCTCCGCCAC........................2011.001100000
....................................................................................................................................AGCA-----------AT-----ATACATCGA--GC--T-TA-GC---CC....................................................................................................................................................................................2411.001000001
...............................................................................................................................................................................................................................................................................ATCCTTCTGACTCCAA-------C-CA--TCCC.........................................................2311.001100000
............................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCC..........................1911.001100000
...............AAAA---C-----A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................2911.001100000
................................................................................................................................................................CGA--GC--T-TA-GC---CCTCAGTCT---..........................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................TATCCTTCTGACTCCAA-------C-C................................................................1911.001100000
............................A------------------------CA--CTTTGCCAGAC------------TCGAATTTCG-..............................................................................................................................................................................................................................................................................2411.001000001
......................................................................................TTCG-AACT-C-------------TTCCCG---CA-ACC-------AGC..................................................................................................................................................................................................................................2311.001100000
........................................................................................CG-AACT-C-------------TTCCCG---CA-ACC-------AGC..................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGC......................2411.001100000
...............................................................................................................................................................TCGA--GC--T-TA-GC---CCTCAGTCT---ATT.......................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCC.....................2011.001100000
...................................................................................................................................................AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTC..............................................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCACGCCAAC..................2711.001100000
...................................................................................................................................................AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTCT---A.........................................................................................................................................................................2811.001000001
droBip1
ATGCT-TGTTAACACAAAA----------------------------------CACTTATTGCCAGAT------------TCGAGTTTTG-AACT-C-------------TTCCCG---CA-ACC-------AGCA-----------AT-----ATACATCGA--GC--T-TA-GC---CCTCAGTCT---ATTTTCCTG---A------C--TATGTGTTCATTCAA-AAATTT---------------ATTTATGCA----T--AT-ATATCCTTCTGACTTCAA-------A-ACCATCCCA--ATAGGCACACCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCTSizeHit CountTotal NormTotal
No Reads
droKik1
AAGCTTTATTAATACAAAA-AAT-----C------------------------TA--ATTTGC-------------------CAATTTCG-AACG-C----CGCCTCCGCCTCCCT---CA-GCC-------AGCACCAA-A--CA-AT-----ATACA----------------------------------TATCCTG---AA-TCT-CTATATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCATCGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droFic1
AAGCC-TATTAATACA-----AT-----T------------------------TA--CTTTGC-----------------AA-TATTTCG-AACG-C-------------CTCCCT---CG-ACA-------AGCACCAA-ATATA-AT-----ATATATCAT--AC--TCTA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droEle1
AAGCC-TATTAATAT---ACAAT-----T------------------------TA--TTTTGC-----------------AA-AAATTCG-AACG-C-------------CTCCTC---CA-ACAAA-----AGCACCAA-ATACA-ATTACAATTATATCATATAC--T-TA-GC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGAGCTCGCTCCGCCACGCCAACACAATCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droRho1
AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCT---CA-ACA-------AGCACCAA-ATACA-ATTACAATTATATCAT--AC--T-TA-GC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATA-A--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droBia1
AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAGTTTCG-AACG-C-------------CTCCCT---CA-GCA-------AGCACCAA-ATACA-ATTACAATTAT-TCAT--AC--T-TA-GC---TCTCAGTCT---ACTTTCCTG---ACCTGA-CTCTATGTGTTCAATCAAAA--------------------------GCCATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCTGCCACTCCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
AAGCT-TATTAATACA-----AT-----T------------------------TA--CTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCT---CA-ACAAA-----AGCACCAA-ATACA-ATTACAACTATATCAT--AC--T-TA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACTCCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droEug1
AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAATTTCAAAACG-C-------------CTCCCT---CA-ACA-------AACACCAA-ATACA-ATTATATTTATATTAC--AC--T-TA-AC---CCTTGGTCT---ACTTTCCTG---A------CTCTATGTGTTCATTCAA-A--------------------------GCAATATA--AT-ATATCGTTCTGACTACAC-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGCTCCGCTACTCCAACGCAAACACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
dm3
AAGCT-TATTAATACAATACAAT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCTCTTCAAGCA-------AGCACCAA-ATACAAATTACAATTATATCAT--AC--T-TA-GCCCACCTCAGTCT---TCTTTCCTG---A------CCCTATGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGATGGGGTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.......................................................................................................................................................................................................................TGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATA.........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCAGTCT---TCTTTCCTG---A------CCC....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCT-TATTAATACAATACA....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GCTCGATCCGCGACGCCAACGCAACCA...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCT-TATTAATACAATACAA...................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTGC-------------------AAATTTCG-AACG-C-------------CTCC.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCT-TATTAATACAATACAA...................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TACAAT-----T------------------------TA--TTTTGC-------------------AAATTTCG-..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AGCACCAA-ATACAAATTAC.................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGTCT---TCTTTCCTG---A------CCCT...................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CGCCAACGCAACCACGATG......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................A-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACA...........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CGCTCGATCCGCGACGCCAA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GGTAAATCCGCGCGCTCGAT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................T--AC--T-TA-GCCCACCTCAGTCT---..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATCCGCGCGCTCGATCCG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CCTCAGTCT---TCTTTCCTG---A------CCC....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGTCT---TCTTTCCTG---A------CCCTA..................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCGTTCTGACTACAA-------A-AC-----T.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGCGCGCTCGATCCGCGA.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CAA-ATACAAATTACAATTATATC........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGATCCGCGACGCCAACGCAACC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A--------------------------CCAATACA--AT-ATATCGTTCTGAC...............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TATATCAT--AC--T-TA-GCCCA......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................T-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGT................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GATCCGCGACGCCAACGCA...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCGACGCCAACGCA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCGCGCGCTCGATCCGCGACGCCAA...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AATTTCG-AACG-C-------------CTCCCTCTT..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AAGCA-------AGCACCAA-ATACAAATTAC.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CGCTCGATCCGCGACGCCA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCGACGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGCA-------AGCACCAA-ATACAAATTACAATTAT...........................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCCGCGCGCTCGATCCGC...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--A.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................T-TA-GCCCACCTCAGTCT---TCT.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A--------------------------CCAATACA--AT-ATATCGTTCT..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................AATTATATCAT--AC--T-TA-GCCCA......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTGTTCACTCCA-A--------------------------CCAAT....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ACA--AT-ATATCGTTCTGACTACAA-------A-.................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGC-------------------AAATTTCG-AACG-C-------------CTCC.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CAT--AC--T-TA-GCCCACCTCA.................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCGCTCGATCCGCGACGCCA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ATACA--AT-ATATCGTTCTGACTACA...........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TT--ATAGGTAAATCCGCGCGCT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................G-C-------------CTCCCTCTTCAAGCA-------AGCACCA..............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................AACG-C-------------CTCCCTCTTCAAGCA-------AGCA.................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TT--ATAGGTAAATCCGCGCGCTCGATC..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTA.............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTTCG-AACG-C-------------CTCCCTCTTCAA...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCACTCCA-A--------------------------CCAATACA--AT-A...........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AACG-C-------------CTCCCTCTTCAAGCA-------AGCACCAA-AT..........................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GACGCCAACGCAACCACGAT.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ACA--AT-ATATCGTTCTGACTACAA-------A-AC-----T.........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GC-------------------AAATTTCG-AACG-C-------------CTCCA......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAGCT-TATTAATACAATACAGT-----T------------------------TA--TTTTGC-------------------AAATTTCA-AACG-C-------------CT-----------------------------------------------------------TA-GCCATCCTTAGTCT---TCTTTCCTG---A------CCCCATGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTACAA-------A-A................................................................2311.00101000000000000000
.......................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTACA...........................................................................2011.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................GACGCCAACGCAACCACGCTGGGGTCT2711.00100010000000000000
...................................................................................................................................................................................................................................................................ATACA--AT-ATATCGTTCTGACTACA...........................................................................2411.00100000000000001000
droSec2
AAGCT-TATTAATACAATACAAT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCTCTCCA-GCAA------AGCACCAA-ATACA-ATTACAATTATATCAT--AC--T-TA-GCCATCCTTAATCT---TCTTTCCTG---AC-TGA-CCCTATGTGTTCACTCCA-A--------------------------CCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................CCCTCTCCA-GCAA------AGCACCA..............................................................................................................................................................................................................................2011.0011000
...................................................................................AATTTCG-AACG-C-------------CTCCCTCTCCA-...............................................................................................................................................................................................................................................2311.0011000
.......................................................................................TCG-AACG-C-------------CTCCCTCTCCA-GCAA------AGCAC................................................................................................................................................................................................................................2811.0011000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCGACGCCAACGCC...............2611.0011000
....................................................................................................................................................................................................CCTG---AC-TGA-CCCTATGTGTTCACTCCA-....................................................................................................................................2711.0011000
.........................................................................................................................................................................T-TA-GCCATCCTTAATCT---TCTTTCCTG---AC-T..........................................................................................................................................................2911.0011000
.........................................................................................................................................................................T-TA-GCCATCCTTAATCT---TCTTTCCT..................................................................................................................................................................2511.0011000
...............................................................................................................................................................................................................................................................................ATCGTTCTGACTACAA-------A-AC-----TT--AT....................................................2311.0011000
...............................................................................................................................................................................................................................................................................................................................GCGCGCTCGATCCGCGACGCCAACGCA...............2711.0011000
..................................................................................................................................................................................................................................................................AATACA--AT-ATATCGTTCTGACT..............................................................................2211.0010100
.................................................................................................................................................................................................TTTCCTG---AC-TGA-CCCTATGTG..............................................................................................................................................2111.0011000
droYak3
AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCCCT--TCA-AC--------AGCACCGAAATACA-ATTACAATTATATCAT--AC--T-TA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCACTCAA-T--------------------------GCAATACACTAT-ATATCGTTCTGACTACAC-------A-AC-----TT--ATAGGTAAACCCGCGCGCTCGATCCGCCACGCCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................TA--TTTTGC-------------------AAATTTCG-AACG-C-------------CTCC.......................................................................................................................................................................................................................................................2511.00110000000000
.....................................................................................TTTCG-AACG-C-------------CTCCCT--TCA-AC--------AGCACCG..............................................................................................................................................................................................................................2811.00110000000000
.....................................................................................................................................................................................................................................................................................CTGACTACAC-------A-AC-----TT--ATAG..................................................1911.00101000000000
................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCCACGCCA....................2111.00101000000000
.....................................................................................................................................................................................................................................T--------------------------GCAATACACTAT-ATATCGTTCTGACC..............................................................................2711.00110000000000
........................................................................................................................................................................................................................................................................CTAT-ATATCGTTCTGACT..............................................................................1811.00110000000000
..............................................................................................G-C-------------CTCCCT--TCA-AC--------AGCACCG..............................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................AC-----TT--ATAGGTAAACCCGCGCGCTCGATC..............................2811.00110000000000
............................................................TGC-------------------AAATTTCG-AACG-C-------------CTCC.......................................................................................................................................................................................................................................................2011.00101000000000
droEre2
AAGCT-TATTAATACA-----AT-----T------------------------TA--TTTTGC-------------------AAAT-TCG-AACG-C-------------CTCCCT--TCA-AC--------AGCACCAAAATACA-ACTACAATTATATCAT--AC--T-TA-GC---CCTCAGTCT---ACTTTCCTG---A------CTCTATGTGTTCACTCAA-T--------------------------GCAATACA--AT-ATATCGTTCTGACTACAA-------A-AC-----TT--ATAGGTAAACCCCCGCGCTCGATCCGCCACACCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................G-AACG-C-------------CTCCCT--TCA-AC--------AGCACCA..............................................................................................................................................................................................................................2412.0022000000
...............................................................................................................................................................................................................................................................................................................................CCGCGCTCGATCCGCCACACCA....................2212.0022000000
............................T------------------------TA--TTTTGC-------------------AAAT-TCG-AACG-C-------------CT.........................................................................................................................................................................................................................................................2311.0011000000
..................................................................................................................................................................................................................................AA-T--------------------------GCAATACA--AT-ATATCGTTCTGACTA.............................................................................2811.0010000100
.........................................................................................................................................................................................................................................................................................................................AAACCCCCGCGCTCGATCCG............................2011.0011000000
.....................................................................................................................................................................................................CTG---A------CTCTATGTGTTCACTC.......................................................................................................................................2011.0011000000
..........................................................................................................................................................................................CT---ACTTTCCTG---A------CTCTATGTGTT............................................................................................................................................2311.0010000010
...................................................................................................................................................................................................TCCTG---A------CTCTATGTGTTCACTCA......................................................................................................................................2311.0011000000
..........................................................................................................................................................TTATATCAT--AC--T-TA-GC---CCTCAGTCT---A.........................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................................................................................AACCCCCGCGCTCGATCCGCCA.........................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................ACGCAACCACGCTGGGGC..1811.0011000000
.....................................................................................................................................GCACCAAAATACA-ACTACAATTATA..........................................................................................................................................................................................................2511.0010000010
................................................................................................................................................................................................................................................................................TCGTTCTGACTACAA-------A-AC-----T.........................................................1911.0011000000
..............................................................................................................................................................................................................................................................................................A-------A-AC-----TT--ATAGGTAAACCCC.........................................1911.0011000000
.......................................................................................................................................................................................................G---A------CTCTATGTGTTCACTCA......................................................................................................................................1911.0011000000
..............................................................................................................................................................................................................................................................................................................................CCCGCGCTCGATCCGCCACACC.....................2211.0011000000
...............................................................................................................................................................................................ACTTTCCTG---A------CTCTATGTGTTCACT........................................................................................................................................2511.0011000000
.............................................................................................................................................................................................................................................................................ATATCGTTCTGACTACAA-------A-AC-----..........................................................2111.0011000000
.......................................................................................................................CA-AC--------AGCACCAAAATACA-ACT...................................................................................................................................................................................................................2111.0010000010
..........................................................................................................................................................................................................................................................................AT-ATATCGTTCTGACTACAA-------A-AC-----T.........................................................2411.0011000000
.........................................................................................................................................................................................................................TGTTCACTCAA-T--------------------------GCAATACA--AT-A...........................................................................................2311.0011000000

Generated: 05/18/2015 at 01:41 AM