dwi_142

TATGTTTACCTCTCCCCTTCCTTCTTACACAGGATTATGTAGGATTATGGCAACACCTCGATATTGGTGAGTTCCAGCTCCAATGTTATTGGAGCCCAACATTGAACACATTGGATTAGTTCTCATCGATGGCGAAGTGTTTGTGAGCAATATCGTATATTGTGCGTGCAGTGTATTGTGATGTGACACCGTGGACGATCAACAAA *********************************.(((((.(((....(((((((.(((.((((((((((.....((((((((...))))))))((((...........)))).......)))))))))).))).))))).....))...))).)))))...........*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V117 male body	M020 head	V119 head	V118 embryo	M045 female body
..............................................................................................................TTGGATTAGTTCTCATCGATGG..........................................................................	22	0	1	429.00	429	241	76	83	27	2
..............................................................................................................TTGGATTAGTTCTCATCGATG...........................................................................	21	0	1	156.00	156	116	32	5	2	1
..............................................................................................................TTGGATTAGTTCTCATCGAT............................................................................	20	0	1	32.00	32	27	4	1	0	0
..............................................................................................................TTGGATTAGTTCTCATCGATGGT.........................................................................	23	1	1	13.00	13	3	3	5	2	0
..............................................................................................................TTGGATTAGTTCTCATCGA.............................................................................	19	0	1	8.00	8	1	7	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGATGT..........................................................................	22	1	1	7.00	7	5	1	1	0	0
.............................................................................................................ATTGGATTAGTTCTCATCGATG...........................................................................	22	0	1	4.00	4	3	1	0	0	0
..............................................................................................................TTGGATTAGTTCTCATTGATGG..........................................................................	22	1	1	4.00	4	4	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGG.............................................................................	19	1	1	3.00	3	0	3	0	0	0
..............................................................................................................TTGGGTTAGTTCTCATCGATGG..........................................................................	22	1	1	2.00	2	1	0	1	0	0
..............................................................................................................TTGGATTAATTCTCATCGATGG..........................................................................	22	1	1	2.00	2	1	0	0	1	0
.....................................................................................TTATTGGAGCCCAACATTGAACACA................................................................................................	25	0	1	2.00	2	0	2	0	0	0
..............................................................................................................TTGGATTAGTTCTTATCGATGG..........................................................................	22	1	1	2.00	2	1	0	1	0	0
..............................................................................................................TTGGATTAGTTCCCATCGATGG..........................................................................	22	1	1	2.00	2	0	0	2	0	0
..............................................................................................................CTGGATTAGTTCTCATCGATGG..........................................................................	22	1	1	2.00	2	0	0	1	1	0
.............................................................................................................ATTGGATTAGTTCTCATCGAT............................................................................	21	0	1	2.00	2	2	0	0	0	0
..............................................................................................................ATGGATTAGTTCTCATCGATGG..........................................................................	22	1	1	2.00	2	0	0	2	0	0
..............................................................................................................TTGGACTAGTTCTCATCGATG...........................................................................	21	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCACATCGATGG..........................................................................	22	1	1	1.00	1	0	0	1	0	0
..............................................................................................................TTGCATTAGTTCTCATCGATGG..........................................................................	22	1	1	1.00	1	0	0	1	0	0
..............................................................................................................TTGGATTAGTTATCATCGATGG..........................................................................	22	1	1	1.00	1	0	0	1	0	0
..............................................................................................................TTAGATTAGTTCTCATCGATGG..........................................................................	22	1	1	1.00	1	0	1	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGATGGA.........................................................................	23	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGCTTAGTTCTCATCGATGG..........................................................................	22	1	1	1.00	1	0	0	1	0	0
..............................................................................................................TTGGATTAGTTCGCATCGATGG..........................................................................	22	1	1	1.00	1	0	1	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGACGG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCAATGG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTTGATTAGTTCTCATCGATGG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGATGA..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCATTGATG...........................................................................	21	1	1	1.00	1	1	0	0	0	0
.............................................................................................................ATTGGATTAGTTCTCATCGATGT..........................................................................	23	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGCTCTCATCGATGG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCGTCGATGG..........................................................................	22	1	1	1.00	1	0	0	1	0	0
.............................................................TATTGGTCAGTCCCAGCTC..............................................................................................................................	19	2	1	1.00	1	0	0	0	0	1
..............................................................................................................TTGGATTAGTTCTCATCGATAG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
.............................................................................................................CTTGGATTAGTTCTCCTCGATGGT.........................................................................	24	3	1	1.00	1	0	0	1	0	0
..............................................................................................................TTGGATTAGTTCTCATCGATGC..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTTGTTCTCATCGATG...........................................................................	21	1	1	1.00	1	1	0	0	0	0
.............................................................................................................ATTGGATTAGTTCTCATCGATGG..........................................................................	23	0	1	1.00	1	1	0	0	0	0
...............................................................................................................TGGATTAGTTCTCATCGATGG..........................................................................	21	0	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGAGG...........................................................................	21	1	1	1.00	1	0	1	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCGGTGG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
..............................................................................................................TTGGATTAGTTCTCATCCATGG..........................................................................	22	1	1	1.00	1	1	0	0	0	0
...........................................................................................................................................................................................ACCGGGGACGATGAACAAA	19	2	3	0.33	1	0	0	0	0	1
.............................................................TATTGGTCAGTCCTAGCTC..............................................................................................................................	19	3	20	0.05	1	0	0	0	0	1
...........................................................GATGTTGGTCAGTTCCTGC................................................................................................................................	19	3	20	0.05	1	0	0	0	0	1

ATACAAATGGAGAGGGGAAGGAAGAATGTGTCCTAATACATCCTAATACCGTTGTGGAGCTATAACCACTCAAGGTCGAGGTTACAATAACCTCGGGTTGTAACTTGTGTAACCTAATCAAGAGTAGCTACCGCTTCACAAACACTCGTTATAGCATATAACACGCACGTCACATAACACTACACTGTGGCACCTGCTAGTTGTTT *********************************.(((((.(((....(((((((.(((.((((((((((.....((((((((...))))))))((((...........)))).......)))))))))).))).))))).....))...))).)))))...........*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V118 embryo	M045 female body
...........................................................CTATAACCAGTCAGGATCG................................................................................................................................	19	3	7	0.29	2	0	2
................................................................ACCACCCCAGGTCGAGGT............................................................................................................................	18	2	5	0.20	1	1	0
.................................................................CCACCCAAGGTCGAGGTAAA.........................................................................................................................	20	3	10	0.10	1	1	0
..................................................................CACACAAGGTCGAGGTAA..........................................................................................................................	18	2	12	0.08	1	1	0
................................................................ACAACCCAAGGTCGAGGTAA..........................................................................................................................	20	3	17	0.06	1	1	0
............................................................................................................................TAGCTGCCGCATCACAAAT...............................................................	19	3	17	0.06	1	0	1
..........AGAGGGAAAGGAAGGATG..................................................................................................................................................................................	18	2	18	0.06	1	0	1
.................................................................CCACACAAGGTCGAGGTAAA.........................................................................................................................	20	3	19	0.05	1	1	0
..................................................................CACACAAGGTCGAGGTAAAA........................................................................................................................	20	3	20	0.05	1	1	0

Species	Coordinate	ID	Type	Alignment
droWil2	scf2_1100000004909:7956734-7956939 +	dwi_142	candidate-rescued	TATGTTTACCTCTCCCCTTCCTTCTTACACAG---GATTATGTAGGATT--ATGGCAACACCTCGATATTGGTGAGTTCCAGCTCCAATGTTATTGGAGCCCAACATTGAACACATTGGATTAGTTCTCATCGATGGCGAAGTGTTT--GTGA--GCAATATCGT--------ATATTGTGCGTGCAGTGTATTGTGATGTGACACCGTGGA------------------------------------------------------------------------------------------------------------------CGATCA------------------A------------CAAA--------------
droVir3	scaffold_13042:906681-906820 -	dvi-mir-976	Known_mirbase	---------------------------------------------------G---CAGCCCCTCGCGATTGATGATAG-CATCTCCAATGAG--CA---TA---------TCACATTGGATTAGTTCTCATCGATGCCGATGCGCTGTACCAGCAACAACAACA---------------------------------------------GGAATA---------------------------------GCAACG----------------GAAACAG-----------------------------------------GAACCGGAACAGAAACAGGA-----------AA------------AAGA--------------
droMoj3	scaffold_6328:2900932-2901070 -			---------------------------------------------------G---CAGCCCCTCGCGATTGATGAAAG-CATCTCCAATGAG--TAT---T---------TCGCATTGGATTAGTTCTCATCGATGTCGATGCGCTGTATCAGCAACAACAACA---------------------------------------------ACATGA-------------------------------------------------------------------------------------------GTTAAACGAAATGAACCAGTTCGTTGTTCTGG-----------------------CCCAGC--------------
droAna3	scaffold_13417:2467534-2467658 -	dan_128	candidate-rescued	--------------------------------------------------------AGCGCCTCGACATTGGTGAGTT-CATCTCCAATGGT--CAGTAGC---------CCGCATTGGATTAGTTCTCATTGATGGCGAAGCGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACCCCCACACCAGCGAGGCACACGCGTACCGCCGAGG--------TTCGGC
droBip1	scf7180000395874:39905-40023 -			--------------------------------------------------------AGCGCCTCGCCATTGGTGGGGG-CGTCTCCAATGGC--CAGAAGC---------CCGCATTGGATTAGTTCTCATTAATGGCGAAGCGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTCCTCCACACCAGCTACCCAAACGCATACCGCTGAGG--------------
droKik1	scf7180000302517:1183684-1183766 +			---------------------------------------------------G--GCATTGCCTCGCCATTGGTGAGAG-CATCTCCAATGAC--GGCACTT-------GATTGCATTGGATTAGTTCTCATTGATGGCGGAGCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1	scf7180000454073:1733913-1734039 +			---------------------------------------------------ACAGCGGCGCCCCGCCATTAATAAGGA-CCTCTCCAATGGC--AGACCGT-------CGAATCATTGGATTAGTTCTCATTAATGGTGGAGTGCCGCACCGA--CCACCACATT------------------------------------------------------------------------------------------------------------------------------------------TTTTTC---------------------------------------TAAGTGCCTAATTCCCGCA--------------
droEle1	scf7180000490751:1118791-1118911 +			---------------------------------------------------G---CATCGCCTCGCCATTGGTGAGGG-CACCTCCAATGGC--GAGCCGG---------CTGCATTGGATTAGTTTTCATCAATGGCGGAGCCCTGCACTGA--CCAGCAGACCGAC-------------------------------------------------------------------------------------------------------------------AGATCGTGA---------------------------------TCCATCC------------------A------------TTCC--------------
droRho1	scf7180000761121:190047-190206 -			---------------------------------------------------ACAGCATCACCTCGCCATTGGTGAGGG-CATCTCCAATGAC--GAGTCGG---------CAGCATTGGATTAGTTCTCATTAATGGCGGAGCGGTGCACTGA--CCAGCAGACTGACCTCT----CC-------------------------------G-----------------------------------CTAGCACCA----------------GATCCCAAATCTTAGATCCCGA---------------------------------CCCATCCACTGCC-----------AG------------CATC--------------
droBia1	scf7180000302069:1150959-1151118 -			---------------------------------------------------G---CACCGCCTCGGCATTGGTGAGGG-CACCTCCAATGGC--GAGCCGG---------CATCATTGGATTAGTTCTCATTAATGGCGGAGTGCTGCACCGA--CCAACGCCAC--------ATACGGTG-----------------------------GGATCCCCAACGTCGCAGTGGGTCCTAT----GTTCCAGTACTAG-------------------------------TCCAGA-------------------------------------CCT------------------A------------CCCA--------------
droTak1	scf7180000415169:844763-844920 -			---------------------------------------------------G---CATCGCCTCGACATTATTGAGGG-CACCTCCAATGGC--GAGCCGA---------CATCATTGGATTAGTTCTCATTAATGGCGGAGCGCTGCACTGA--CCAACTGTTCG----TCCATAAGGTG-----------------------------AGAT-------------------------------------------------CTAATGGGTATCGTATT-------------------------------------------------------------------------GTCTAATTATTGAATCTTGCTAGTTAAC
droEug1	scf7180000409230:879611-879760 -			---------------------------------------------------G---CAGCGCCTTGACATTGGCGAGGC-CAACTCCAATGTC--GAATCGA---------AATCATTGGATTAGTTCTCATCAATGACTGAGCCCTGTAATGA--CCAACGTACC--------ATATCTTT-----------------------------ATATCC--------------------------ATATCCATGTCCAGTGGAAATCTACAGG--------------------------------------------------------CCACCA------------------A------------CCCA--------------
dm3	chrX:19452904-19453053 +	dme-mir-976	Known_mirbase	AATGTCTGCA------------------ACGGCGGTGGTGGGCATCGCCATG---CAGTGCCGCGGCATTGGTGAGGC-CATCTCCAATGGA-TTAGTTCT---------CAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTA--ACAACATCGC---------------------------------------GCCGGGGAATC------------------------------------------------------------------------------------------------------------------CCA------------------A------------CACA--------------
droSim2	x:18342543-18342673 +	dsi-mir-976	Known_mirbase	---------------------------------------------------G---CAGTGTCGTGGCATTGGTGAGGA-CATCTCCAATGGA-TTGGTTCT---------CATCATTGGATTAGTTATCATCAATGCCGGTGCACTGCACTGCTGTCAACTTCGC---------------------------------------GCAATGGAATA------------------------------------------------------------------------------------------------------------------CCA------------------ACTCCGGAGTGCCGAAA--------------
droYak3	X:11885744-11885899 -	dya_50	confident	---------------------------------------------------G---CAGTGCCACGACATTGGTGAGGG-CATCTCCAATGGG--GACCCGG---------CATCATTGGATTAGTTCTCATTAATGCCGGAGCACTGCACCTA--CCAACTTCGC--------A-------------------------------CGG-----------------------TTCCTATTCCTATTCCGATTCCGA-------------------------------TTCGGAATCA--------------------------------------------------ACCAAGTGCGGACAGCTCAGA--------------
droEre2	scaffold_4690:9688916-9689072 +	der_56	confident	---------------------------------------------------G---CAGTGCCTCGACATTGGTGAGGG-CATCTCCAATGGG--GAGCCAG---------CATCATTGGATTAGTTCTCATTAATGCCGGAGCATGGCACCTA--CGAACTGAGCA----TT----TG-------------------------------GGGA------------------------------------------------------------TCGGGATCCCGGATTCGGAGTCAACAAACTCTTGTCAAAC-AAA------------CGA------------------G------------CAGA--------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

TATGTTTACCTCTCCCCTTCCTTCTTACACAG---GATTATGTAGGATT--ATGGCAACACCTCGATATTGGTGAGTTCCAGCTCCAATGTTATTGGAGCCCAACATTGAACACATTGGATTAGTTCTCATCGATGGCGAAGTGTTT--GTGA--GCAATATCGT--------ATATTGTGCGTGCAGTGTATTGTGATGTGACACCGTGGA------------------------------------------------------------------------------------------------------------------CGATCA------------------A------------CAAA--------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................................................................................................................TTGGATTAGTTCTCATCGATGG....................................................................................................................................................................................................................................................	22	1	429.00	429	76	2	241	27	83
...................................................................................................................TTGGATTAGTTCTCATCGATG.....................................................................................................................................................................................................................................................	21	1	156.00	156	32	1	116	2	5
...................................................................................................................TTGGATTAGTTCTCATCGAT......................................................................................................................................................................................................................................................	20	1	32.00	32	4	0	27	0	1
...................................................................................................................TTGGATTAGTTCTCATCGATGGT...................................................................................................................................................................................................................................................	23	1	13.00	13	3	0	3	2	5
...................................................................................................................TTGGATTAGTTCTCATCGA.......................................................................................................................................................................................................................................................	19	1	8.00	8	7	0	1	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGT....................................................................................................................................................................................................................................................	22	1	7.00	7	1	0	5	0	1
..................................................................................................................ATTGGATTAGTTCTCATCGATG.....................................................................................................................................................................................................................................................	22	1	4.00	4	1	0	3	0	0
...................................................................................................................TTGGATTAGTTCTCATCGG.......................................................................................................................................................................................................................................................	19	1	3.00	3	3	0	0	0	0
..........................................................................................TTATTGGAGCCCAACATTGAACACA..........................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0
..................................................................................................................ATTGGATTAGTTCTCATCGAT......................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGGA...................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGA....................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
..................................................................................................................ATTGGATTAGTTCTCATCGATGT....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGC....................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
..................................................................................................................ATTGGATTAGTTCTCATCGATGG....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGG....................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0

droVir3

---------------------------------------------------G---CAGCCCCTCGCGATTGATGATAG-CATCTCCAATGAG--CA---TA---------TCACATTGGATTAGTTCTCATCGATGCCGATGCGCTGTACCAGCAACAACAACA---------------------------------------------GGAATA---------------------------------GCAACG----------------GAAACAG-----------------------------------------GAACCGGAACAGAAACAGGA-----------AA------------AAGA--------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................TGGATTAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	23	1	20902.00	20902	2	0	55	2	8	476	5	141	0	97	1	0	0	0	4	0	0	0	2	1	1337	5	1	4	3	8	7	4	5281	4252	1747	5989	3	535	2	1	2	2	4	859	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	24	0	5	11	9	4	1	0	0	0	0	0	0	3	1	0	1	0
...................................................................................................................TTGGATTAGTTCTCATCGATG.....................................................................................................................................................................................................................................................	21	1	4974.00	4974	20	0	12	0	5	227	9	56	0	62	0	0	0	0	0	0	0	0	0	0	541	0	0	12	4	0	1	2	759	760	332	984	1	346	1	0	1	0	2	715	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	77	0	0	3	8	3	4	6	8	4	2	0	1	0	0	1	1	3
...................................................................................................................TTGGATTAGTTCTCATCGATGC....................................................................................................................................................................................................................................................	22	1	4673.00	4673	44	3	5	1	2	149	2	48	0	46	0	0	0	0	0	0	0	0	0	0	504	0	0	4	0	0	0	1	992	635	305	1043	0	226	1	0	0	1	3	541	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	56	0	2	1	9	15	1	8	1	6	6	2	2	0	1	2	2	2
...................................................................................................................TTGGATTAGTTCTCATCGAT......................................................................................................................................................................................................................................................	20	1	870.00	870	1	0	3	0	0	74	0	25	1	38	0	0	0	0	1	0	0	0	0	0	90	0	0	6	2	0	0	0	121	103	37	107	0	96	0	0	0	0	0	148	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	1	2	0	1	0	0	1	0	0	0	0	0	0	1
...................................................................................................................TTGGATTAGTTCTCATCGATGCC...................................................................................................................................................................................................................................................	23	1	546.00	546	138	2	1	0	1	9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	64	0	0	1	0	0	0	0	44	34	24	103	0	24	0	0	0	0	1	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	4	0	0	0	0	0	0	15	4	16	7	4	2	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCC...................................................................................................................................................................................................................................................	22	1	496.00	496	0	0	3	0	0	7	0	1	0	4	0	0	0	0	0	0	0	0	1	0	12	0	0	1	0	0	0	1	146	95	44	134	0	6	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	15	0	0	0	1	0	1	0	2	2	2	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGC....................................................................................................................................................................................................................................................	21	1	421.00	421	0	0	9	1	0	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	105	90	35	132	0	8	1	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	3	1	0	0	0	0	0	0	0	0	1	1	1
.................................................................CGATTGATGATAG-CATCTCCA......................................................................................................................................................................................................................................................................................................	21	1	325.00	325	0	0	1	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0	0	86	66	29	98	0	5	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	22	1	249.00	249	0	0	2	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	65	67	19	61	0	6	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	23	1	231.00	231	1	0	2	0	0	2	0	8	1	3	0	0	0	0	0	0	0	0	0	0	9	0	0	0	1	0	0	0	64	38	23	61	0	3	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	22	1	192.00	192	0	0	1	0	0	1	0	9	0	5	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	51	39	19	56	0	2	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATG.....................................................................................................................................................................................................................................................	20	1	168.00	168	0	0	5	0	0	5	0	1	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	43	37	14	46	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	2	0	0	0	0	0	0	0	0	1	1	1	0
...................................................................................................................TTGGATTAGTTCTCATCGATGT....................................................................................................................................................................................................................................................	22	1	164.00	164	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	0	0	0	0	0	0	25	28	5	33	0	24	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATC.....................................................................................................................................................................................................................................................	21	1	159.00	159	12	0	0	0	0	20	2	0	0	6	0	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0	0	9	14	9	35	0	10	0	0	0	0	1	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	21	1	154.00	154	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	36	32	13	45	0	7	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCGT.................................................................................................................................................................................................................................................	24	1	130.00	130	0	0	0	0	0	7	0	0	0	1	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	28	28	10	35	0	7	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCCC..................................................................................................................................................................................................................................................	24	1	92.00	92	18	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	6	5	6	17	0	3	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCGTC................................................................................................................................................................................................................................................	25	1	74.00	74	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	8	12	6	20	0	9	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGA.......................................................................................................................................................................................................................................................	19	1	70.00	70	7	0	0	0	0	7	0	0	0	3	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	3	3	1	6	0	7	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	2	4	1	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCT...................................................................................................................................................................................................................................................	23	1	70.00	70	4	0	1	0	0	2	0	2	0	1	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	10	9	4	10	0	5	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0	1	0
...................................................................ATTGATGATAG-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	20	1	61.00	61	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	18	16	5	15	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCC.......................................................................................................................................................................................................................................................................................................	20	1	58.00	58	0	0	0	0	0	3	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	15	7	16	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCC..................................................................................................................................................................................................................................................	23	1	52.00	52	0	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	7	8	9	15	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...................................................................................................................TTGGATTAGTTCTCATCGATGCTC..................................................................................................................................................................................................................................................	24	1	48.00	48	0	0	0	0	0	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	9	4	2	9	0	2	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCT..................................................................................................................................................................................................................................................	23	1	43.00	43	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	12	2	5	10	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCA......................................................................................................................................................................................................................................................................................................	19	1	40.00	40	0	0	1	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	8	11	6	9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	24	1	38.00	38	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	7	4	2	11	0	4	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCA...................................................................................................................................................................................................................................................	23	1	36.00	36	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	2	4	4	9	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	1	1
...................................................................................................................TTGGATTAGTTCTCATCGATGCCT..................................................................................................................................................................................................................................................	24	1	35.00	35	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	5	1	4	7	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTC........................................................................................................................................................................................................................................................................................................	19	1	35.00	35	4	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	8	1	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAATGT..................................................................................................................................................................................................................................................................................................	23	1	33.00	33	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	10	2	5	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGAT......................................................................................................................................................................................................................................................	19	1	33.00	33	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	9	8	0	6	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATT.....................................................................................................................................................................................................................................................	21	1	21.00	21	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	6	1	1	0	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GGATTAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	22	1	20.00	20	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	3	2	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAT.....................................................................................................................................................................................................................................................................................................	22	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	3	7	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCA..................................................................................................................................................................................................................................................	23	1	13.00	13	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	1	2	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAATT...................................................................................................................................................................................................................................................................................................	24	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................GATTAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	21	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................TAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	18	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATA.....................................................................................................................................................................................................................................................	21	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCT...................................................................................................................................................................................................................................................	22	1	10.00	10	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	2	2	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGA....................................................................................................................................................................................................................................................	22	1	9.00	9	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TTAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	19	1	9.00	9	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	2	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCAA..................................................................................................................................................................................................................................................	24	1	8.00	8	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAATC...................................................................................................................................................................................................................................................................................................	24	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	2	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATTAGTTCTCATCGATGCCG..................................................................................................................................................................................................................................................	20	1	7.00	7	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGT....................................................................................................................................................................................................................................................	21	1	7.00	7	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCC......................................................................................................................................................................................................................................................................................................	21	1	7.00	7	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCTT..................................................................................................................................................................................................................................................	24	1	7.00	7	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAATC...................................................................................................................................................................................................................................................................................................	22	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GGATTAGTTCTCATCGATGCCGA.................................................................................................................................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCCA..................................................................................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCGA.................................................................................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAATGTC--...............................................................................................................................................................................................................................................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGA.......................................................................................................................................................................................................................................................	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCGC.................................................................................................................................................................................................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAATT...................................................................................................................................................................................................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCC.......................................................................................................................................................................................................................................................................................................	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCGTCT...............................................................................................................................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCTC..................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCGTCC...............................................................................................................................................................................................................................................	26	1	4.00	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAC.....................................................................................................................................................................................................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCTCC.................................................................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCAATGA..................................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................GATTGATGATAG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAAA....................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGTTC..................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................GATTGATGATAG-CATCTCCA......................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................CGCGATTGATGATAG-CATCTCCA......................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCTCT.................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................TCGCGATTGATGATAG-CATCTCC.......................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCT.........................................................................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCA...................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................ATTGATGATAG-CATCTCCAATTT..................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATCT....................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATC.....................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................GATTAGTTCTCATCGATGCCGA.................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATAA....................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................TTGATGATAG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAATCT..................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGTTC..................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATTAGTTCTCATCGATGCCGAT................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATTT....................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTCTCATCGATGCCCT.................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTT........................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGCCGT.................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GGATTAGTTCTCATCGATGCC...................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................TCGCGATTGATGATAG-CATCT.........................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGTT...................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................TTGATGATAG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAATGA..................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................GATTGATGATAG-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TTAGTTCTCATCGATGCCT..................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGATGATAG-CATCTCCC......................................................................................................................................................................................................................................................................................................	19	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................TTGATGATAG-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CGATTGATGATAG-CATCTCCAAAT...................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................TCGCGATTGATGATAG-CATCTCCA......................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................GATTGATGATAG-CATCTCCAATT...................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TGATGATAG-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

---------------------------------------------------G---CAGCCCCTCGCGATTGATGAAAG-CATCTCCAATGAG--TAT---T---------TCGCATTGGATTAGTTCTCATCGATGTCGATGCGCTGTATCAGCAACAACAACA---------------------------------------------ACATGA-------------------------------------------------------------------------------------------GTTAAACGAAATGAACCAGTTCGTTGTTCTGG-----------------------CCCAGC--------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....................................................................................................................TGGATTAGTTCTCATCGATGTCG..................................................................................................................................................................................................................................................	23	1	315.00	315	16	0	1	0	1	297
...................................................................................................................TTGGATTAGTTCTCATCGATGT....................................................................................................................................................................................................................................................	22	1	194.00	194	8	1	2	2	1	180
...................................................................ATTGATGAAAG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	22	1	100.00	100	8	0	1	0	0	91
...................................................................................................................TTGGATTAGTTCTCATCGATG.....................................................................................................................................................................................................................................................	21	1	60.00	60	1	0	0	0	0	59
...................................................................................................................TTGGATTAGTTCTCATCGATGTC...................................................................................................................................................................................................................................................	23	1	40.00	40	1	0	0	1	0	38
....................................................................................................................TGGATTAGTTCTCATCGATGTC...................................................................................................................................................................................................................................................	22	1	14.00	14	0	0	0	0	0	14
....................................................................................................................TGGATTAGTTCTCATCGATGT....................................................................................................................................................................................................................................................	21	1	11.00	11	1	0	1	0	0	9
...................................................................................................................TTGGATTAGTTCTCATCGATGTT...................................................................................................................................................................................................................................................	23	1	10.00	10	0	0	0	0	0	10
...................................................................ATTGATGAAAG-CATCTCCAATGT..................................................................................................................................................................................................................................................................................................	23	1	10.00	10	0	0	0	1	0	9
.....................................................................................................................GGATTAGTTCTCATCGATGTCGTC................................................................................................................................................................................................................................................	24	1	9.00	9	0	0	0	0	0	9
...................................................................................................................TTGGATTAGTTCTCATCGATGTCT..................................................................................................................................................................................................................................................	24	1	7.00	7	0	0	0	0	0	7
...................................................................................................................TTGGATTAGTTCTCATCGAT......................................................................................................................................................................................................................................................	20	1	6.00	6	0	0	0	0	0	6
...................................................................................................................TTGGATTAGTTCTCATCGATGTTC..................................................................................................................................................................................................................................................	24	1	5.00	5	0	0	0	0	0	5
....................................................................................................................TGGATTAGTTCTCATCGATGTCGTC................................................................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	4
.....................................................................................................................GGATTAGTTCTCATCGATGTCG..................................................................................................................................................................................................................................................	22	1	4.00	4	3	0	0	0	0	1
.................................................................CGATTGATGAAAG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	3
....................................................................................................................TGGATTAGTTCTCATCGATGTCGC.................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
....................................................................................................................TGGATTAGTTCTCATCGATGTCGT.................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
...................................................................................................................TTGGATTAGTTCTCATCGATGTTT..................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
...................................................................ATTGATGAAAG-CATCTCCAATGA..................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	2
...................................................................................................................TTGGATTAGTTCTCATCGATGC....................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	2
....................................................................................................................TGGATTAGTTCTCATCGATG.....................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	2
...................................................................................................................TTGGATTAGTTCTCATCGATGTCG..................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
...................................................................ATTGATGAAAG-CATCTCCAATGTC--...............................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
...................................................................ATTGATGAAAG-CATCTCCAATT...................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................ATTAGTTCTCATCGATGTCG..................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGTA...................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
...................................................................................................................TTGGATTAGTTCTCATCGATGTTTC.................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.................................................................CGATTGATGAAAG-CATCTCC.......................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0
.....................................................................................................................GGATTAGTTCTCATCGATGTC...................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATCGATGTTCC.................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
....................................................................................................................TGGATTAGTTCTCATCGATGTCT..................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
....................................................................................................................TGGATTAGTTCTCATCGATGTCA..................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...................................................................................................................TTGGATTAGTTCTCATCGATGTCTC.................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
....................................................................TTGATGAAAG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...................................................................................................................TTGGATTAGTTCTCATCGATGTCC..................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1

droAna3

--------------------------------------------------------AGCGCCTCGACATTGGTGAGTT-CATCTCCAATGGT--CAGTAGC---------CCGCATTGGATTAGTTCTCATTGATGGCGAAGCGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACCCCCACACCAGCGAGGCACACGCGTACCGCCGAGG--------TTCGGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................TTGGATTAGTTCTCATTGATGG....................................................................................................................................................................................................................................................	22	1	830.00	830	59	0	1	61	281	428
...................................................................................................................TTGGATTAGTTCTCATTGATG.....................................................................................................................................................................................................................................................	21	1	292.00	292	3	0	0	17	168	104
...................................................................................................................TTGGATTAGTTCTCATTGATGT....................................................................................................................................................................................................................................................	22	1	62.00	62	0	0	0	1	47	14
...................................................................................................................TTGGATTAGTTCTCATTGATGGT...................................................................................................................................................................................................................................................	23	1	35.00	35	2	0	0	1	14	18
...................................................................................................................TTGGATTAGTTCTCATTGAT......................................................................................................................................................................................................................................................	20	1	18.00	18	0	0	0	4	13	1
...................................................................................................................TTGGATTAGTTCTCATTGATGGC...................................................................................................................................................................................................................................................	23	1	11.00	11	1	0	0	0	6	4
..................................................................................................................ATTGGATTAGTTCTCATTGATG.....................................................................................................................................................................................................................................................	22	1	11.00	11	0	0	0	0	10	1
...................................................................................................................TTGGATTAGTTCTCATTGATGGA...................................................................................................................................................................................................................................................	23	1	8.00	8	0	0	0	0	3	5
...................................................................................................................TTGGATTAGTTCTCATTGATGGTT..................................................................................................................................................................................................................................................	24	1	6.00	6	1	0	0	0	3	2
....................................................................................................................TGGATTAGTTCTCATTGATGG....................................................................................................................................................................................................................................................	21	1	4.00	4	4	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTGATT.....................................................................................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	2	2
..................................................................................................................ATTGGATTAGTTCTCATTGATGT....................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	3	0
...................................................................................................................TTGGATTAGTTCTCATTGATA.....................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	1	2
...................................................................................................................TTGGATTAGTTCTCATTGATC.....................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	1	1
..................................................................................................................ATTGGATTAGTTCTCATTGATGA....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
..................................................................................................................ATTGGATTAGTTCTCATTGA.......................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
...................................................................................................................TTGGATTAGTTCTCATTGATGGTTT.................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
...................................................................................................................TTGGATTAGTTCTCATTGA.......................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
...................................................................................................................TTGGATTAGTTCTCATTGATAT....................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
...................................................................................................................TTGGATTAGTTCTCATTGATGGAAT.................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
..................................................................................................................ATTGGATTAGTTCTCATTGAT......................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
...................................................................................................................TTGGATTAGTTCTCATTGATGAAT..................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	1

droBip1

--------------------------------------------------------AGCGCCTCGCCATTGGTGGGGG-CGTCTCCAATGGC--CAGAAGC---------CCGCATTGGATTAGTTCTCATTAATGGCGAAGCGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTCCTCCACACCAGCTACCCAAACGCATACCGCTGAGG--------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

---------------------------------------------------G--GCATTGCCTCGCCATTGGTGAGAG-CATCTCCAATGAC--GGCACTT-------GATTGCATTGGATTAGTTCTCATTGATGGCGGAGCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

---------------------------------------------------ACAGCGGCGCCCCGCCATTAATAAGGA-CCTCTCCAATGGC--AGACCGT-------CGAATCATTGGATTAGTTCTCATTAATGGTGGAGTGCCGCACCGA--CCACCACATT------------------------------------------------------------------------------------------------------------------------------------------TTTTTC---------------------------------------TAAGTGCCTAATTCCCGCA--------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

---------------------------------------------------G---CATCGCCTCGCCATTGGTGAGGG-CACCTCCAATGGC--GAGCCGG---------CTGCATTGGATTAGTTTTCATCAATGGCGGAGCCCTGCACTGA--CCAGCAGACCGAC-------------------------------------------------------------------------------------------------------------------AGATCGTGA---------------------------------TCCATCC------------------A------------TTCC--------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

---------------------------------------------------ACAGCATCACCTCGCCATTGGTGAGGG-CATCTCCAATGAC--GAGTCGG---------CAGCATTGGATTAGTTCTCATTAATGGCGGAGCGGTGCACTGA--CCAGCAGACTGACCTCT----CC-------------------------------G-----------------------------------CTAGCACCA----------------GATCCCAAATCTTAGATCCCGA---------------------------------CCCATCCACTGCC-----------AG------------CATC--------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

---------------------------------------------------G---CACCGCCTCGGCATTGGTGAGGG-CACCTCCAATGGC--GAGCCGG---------CATCATTGGATTAGTTCTCATTAATGGCGGAGTGCTGCACCGA--CCAACGCCAC--------ATACGGTG-----------------------------GGATCCCCAACGTCGCAGTGGGTCCTAT----GTTCCAGTACTAG-------------------------------TCCAGA-------------------------------------CCT------------------A------------CCCA--------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

---------------------------------------------------G---CATCGCCTCGACATTATTGAGGG-CACCTCCAATGGC--GAGCCGA---------CATCATTGGATTAGTTCTCATTAATGGCGGAGCGCTGCACTGA--CCAACTGTTCG----TCCATAAGGTG-----------------------------AGAT-------------------------------------------------CTAATGGGTATCGTATT-------------------------------------------------------------------------GTCTAATTATTGAATCTTGCTAGTTAAC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

---------------------------------------------------G---CAGCGCCTTGACATTGGCGAGGC-CAACTCCAATGTC--GAATCGA---------AATCATTGGATTAGTTCTCATCAATGACTGAGCCCTGTAATGA--CCAACGTACC--------ATATCTTT-----------------------------ATATCC--------------------------ATATCCATGTCCAGTGGAAATCTACAGG--------------------------------------------------------CCACCA------------------A------------CCCA--------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

AATGTCTGCA------------------ACGGCGGTGGTGGGCATCGCCATG---CAGTGCCGCGGCATTGGTGAGGC-CATCTCCAATGGA-TTAGTTCT---------CAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTA--ACAACATCGC---------------------------------------GCCGGGGAATC------------------------------------------------------------------------------------------------------------------CCA------------------A------------CACA--------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................................................................................................TTGGATTAGTTATCATCAATGC....................................................................................................................................................................................................................................................	22	1	36299.00	36299	0	0	0	0	0	0	0	1	1	1	1	15	0	0	0	0	0	0	0	0	0	0	0	5233	0	0	0	0	0	0	0	0	0	0	0	1	2	2	3	1	10	2	4	1	7	0	1	0	1	3	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	7	1	0	0	0	0	2	5	1	2	32	1	0	35	0	1	4	7	0	2	0	0	3	0	3	2	0	35	1	3	1	30	0	0	0	0	1	0	0	0	3	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	5	0	0	3	27	0	9	0	0	0	7	2	0	0	0	0	0	12	638	3	859	0	0	0	0	466	0	579	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	29	63	2	0	4	6	6	27	34	5	1	87	4	0	0	2	0	1	0	0	0	0	0	0	0	1	3	0	2	230	1	0	135	1	1	21	3	11	1	2	0	2	0	0	3	88	1	4940	2	2	15	1	0	2	1	18	1	0	1	3	0	3	0	27	3	0	1	3	7	4	6	10	4	33	0	19	0	2	2	0	1	93	0	44	45	0	0	3	4	1	18	1	12144	6	1	1	2	6	0	50	0	6	0	45	0	11	3	2	0	9	9686	11	72	0
...................................................................................................................TTGGATTAGTTATCATCAATG.....................................................................................................................................................................................................................................................	21	1	12374.00	12374	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	901	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	2	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	2	0	1	0	0	1	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	3	0	0	1	53	0	15	0	1	0	4	0	0	0	0	0	0	7	1227	8	1354	0	0	0	0	980	0	1041	0	0	0	0	0	0	1	1	0	0	0	2	1	0	0	0	0	16	35	0	0	0	0	3	5	0	0	0	6	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	62	0	0	46	0	0	4	2	1	0	0	0	0	0	0	1	24	2	2129	3	0	6	0	0	0	0	3	0	0	0	1	0	0	0	7	2	0	0	0	3	0	2	0	0	49	0	2	0	0	0	0	1	154	0	140	188	0	0	0	3	0	0	0	2379	2	0	0	0	1	0	10	0	7	0	31	1	3	3	1	0	0	1394	1	4	0
...................................................................................................................TTGGATTAGTTATCATCAATGCC...................................................................................................................................................................................................................................................	23	1	5476.00	5476	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	569	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	1	0	0	0	7	0	0	16	1	0	1	2	0	1	0	0	2	0	0	2	0	15	1	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	7	1	0	0	0	0	3	0	0	0	0	0	0	4	212	1	165	0	0	0	0	81	0	98	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	7	0	0	3	1	1	5	12	4	0	14	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0	0	12	1	0	2	2	0	0	1	0	0	0	1	1	5	0	1275	1	0	3	0	1	1	2	5	0	0	0	3	0	0	0	6	0	0	0	0	0	0	0	3	2	7	0	1	0	0	0	0	0	18	0	10	15	0	0	0	0	1	4	0	1473	0	0	1	0	2	0	8	0	1	0	4	0	0	0	0	0	1	1265	1	15	0
...................................................................................................................TTGGATTAGTTATCATCAAT......................................................................................................................................................................................................................................................	20	1	1576.00	1576	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	178	6	89	0	0	0	0	115	0	104	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	2	0	0	3	0	1	0	0	0	0	0	0	0	1	1	412	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	13	0	4	6	0	0	0	0	0	1	1	298	0	0	0	0	0	0	2	0	1	0	8	1	0	1	0	0	0	249	0	2	0
...................................................................................................................TTGGATTAGTTATCATCAATGATC..................................................................................................................................................................................................................................................	24	1	1447.00	1447	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1024	423	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCC...................................................................................................................................................................................................................................................	22	1	1236.00	1236	0	0	0	0	0	1	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	550	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	12	0	0	8	0	0	0	0	0	2	0	0	2	0	0	5	0	13	6	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	3	0	0	0	0	0	0	0	0	0	0	2	13	0	20	0	0	0	0	3	0	3	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	0	3	6	2	0	19	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	150	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	163	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	204	0	2	0
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...................................................................................................................TTGGATTAGTTATCATCAATGCAT..................................................................................................................................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCCC..................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
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droSim2

---------------------------------------------------G---CAGTGTCGTGGCATTGGTGAGGA-CATCTCCAATGGA-TTGGTTCT---------CATCATTGGATTAGTTATCATCAATGCCGGTGCACTGCACTGCTGTCAACTTCGC---------------------------------------GCAATGGAATA------------------------------------------------------------------------------------------------------------------CCA------------------ACTCCGGAGTGCCGAAA--------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................TTGGATTAGTTATCATCAATGCC...................................................................................................................................................................................................................................................	23	1	1235.00	1235	36	958	5	0	202	9	3	3	0	0	0	0	0	19	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCC...................................................................................................................................................................................................................................................	22	1	1107.00	1107	0	3	0	0	921	25	3	0	1	0	0	0	0	154	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGCCG..................................................................................................................................................................................................................................................	24	1	464.00	464	0	0	0	0	458	6	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAAT......................................................................................................................................................................................................................................................	19	1	285.00	285	0	0	0	0	278	7	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAA.......................................................................................................................................................................................................................................................	18	1	266.00	266	0	0	0	0	263	3	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCCG..................................................................................................................................................................................................................................................	23	1	179.00	179	0	0	0	0	171	7	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGC....................................................................................................................................................................................................................................................	22	1	169.00	169	1	21	0	2	125	1	1	0	0	0	0	0	0	18	0	0	0
...................................................................................................................TTGGATTAGTTATCATCA........................................................................................................................................................................................................................................................	18	1	126.00	126	0	1	0	0	123	2	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAA.......................................................................................................................................................................................................................................................	19	1	105.00	105	0	2	0	0	100	2	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAAT......................................................................................................................................................................................................................................................	20	1	100.00	100	0	0	0	0	98	2	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGC....................................................................................................................................................................................................................................................	21	1	93.00	93	0	0	0	0	70	3	1	0	0	0	0	0	0	19	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATG.....................................................................................................................................................................................................................................................	20	1	90.00	90	0	0	0	0	74	4	0	0	0	0	0	0	0	12	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATG.....................................................................................................................................................................................................................................................	21	1	82.00	82	2	27	0	0	50	0	0	0	0	0	0	0	0	3	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCCA..................................................................................................................................................................................................................................................	23	1	22.00	22	0	0	0	0	0	0	0	0	1	1	0	0	0	20	0	0	0
..................................................................CATTGGTGAGGA-CATCTCCA......................................................................................................................................................................................................................................................................................................	20	1	19.00	19	0	1	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CATTGGTGAGGA-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	22	1	18.00	18	0	0	0	0	2	0	0	0	0	0	0	0	0	16	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGCCT..................................................................................................................................................................................................................................................	24	1	14.00	14	1	12	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................CATTGGTGAGGA-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	21	1	7.00	7	0	0	0	0	6	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGCCA..................................................................................................................................................................................................................................................	24	1	5.00	5	0	1	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
.....................................................................................................................GGATTAGTTATCATCAATGCC...................................................................................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CATTGGTGAGGA-CATCTCC.......................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GGATTAGTTATCATCAAT......................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATTAGTTATCATCAATGCCGGT................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGT....................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGCCGG.................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGCCC..................................................................................................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCCT..................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................GGATTAGTTATCATCAATGCCG..................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGGTGAGGA-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................TTGGTGAGGA-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGT....................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCT...................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................TGGATTAGTTATCATCAATGCCAA.................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................TTGGATTAGTTATCATCAATGCT...................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CATTGGTGAGGA-CATCTC........................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................ATTGGATTAGTTATCATCAATG.....................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............................................................CGTGGCATTGGTGAGGA-CATCT.........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................TGGAATA------------------------------------------------------------------------------------------------------------------CCA------------------ACTCCGGAGTG....................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGGATTAGTTATCATC.........................................................................................................................................................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................CATTGGTGAGGA-CATCTCCAATT...................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................TTAGTTATCATCAATGCC...................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGGTGAGGA-CATCTCCA......................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATTAGTTATCATCAATGCCGGAT...............................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CATTGGTGAGGA-CATCTCT.......................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................ATTGGATTAGTTATCATCAATGC....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CATTGGTGAGGA-CATCTT........................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droYak3

---------------------------------------------------G---CAGTGCCACGACATTGGTGAGGG-CATCTCCAATGGG--GACCCGG---------CATCATTGGATTAGTTCTCATTAATGCCGGAGCACTGCACCTA--CCAACTTCGC--------A-------------------------------CGG-----------------------TTCCTATTCCTATTCCGATTCCGA-------------------------------TTCGGAATCA--------------------------------------------------ACCAAGTGCGGACAGCTCAGA--------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................................................TTGGATTAGTTCTCATTAATGC....................................................................................................................................................................................................................................................	22	1	138.00	138	86	6	1	0	0	4	41	0	0	0	0
....................................................................TTGGTGAGGG-CATCTCCAATGG..................................................................................................................................................................................................................................................................................................	22	1	69.00	69	0	3	1	0	0	2	63	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATG.....................................................................................................................................................................................................................................................	21	1	60.00	60	7	3	0	0	1	1	48	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTAAT......................................................................................................................................................................................................................................................	20	1	23.00	23	16	1	0	0	0	0	6	0	0	0	0
....................................................................TTGGTGAGGG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	21	1	16.00	16	0	1	0	0	0	1	14	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATGCC...................................................................................................................................................................................................................................................	23	1	16.00	16	16	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATGCT...................................................................................................................................................................................................................................................	23	1	8.00	8	7	0	0	0	0	0	1	0	0	0	0
..................................................................................................................ATTGGATTAGTTCTCATTAATG.....................................................................................................................................................................................................................................................	22	1	5.00	5	1	0	0	0	0	0	4	0	0	0	0
..................................................................................................................ATTGGATTAGTTCTCATTAAT......................................................................................................................................................................................................................................................	21	1	5.00	5	2	0	0	0	0	1	2	0	0	0	0
...................................................................ATTGGTGAGGG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	1	2	0	0	0	0
...................................................................ATTGGTGAGGG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	1	1	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATGCCT..................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................ATTGGTGAGGG-CATCTCCTT.....................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................TTGGTGAGGG-CATCTCCAATGA..................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATGT....................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................ATTGGTGAGGG-CATCTCCAATA...................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................ATTGGATTAGTTCTCATTAATGA....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................ATTGGTGAGGG-CATCTTTT......................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

---------------------------------------------------G---CAGTGCCTCGACATTGGTGAGGG-CATCTCCAATGGG--GAGCCAG---------CATCATTGGATTAGTTCTCATTAATGCCGGAGCATGGCACCTA--CGAACTGAGCA----TT----TG-------------------------------GGGA------------------------------------------------------------TCGGGATCCCGGATTCGGAGTCAACAAACTCTTGTCAAAC-AAA------------CGA------------------G------------CAGA--------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
....................................................................TTGGTGAGGG-CATCTCCAATGG..................................................................................................................................................................................................................................................................................................	22	1	612.00	612	0	0	7	0	544	61	0
...................................................................................................................TTGGATTAGTTCTCATTAATGC....................................................................................................................................................................................................................................................	22	1	259.00	259	2	0	3	0	178	76	0
...................................................................................................................TTGGATTAGTTCTCATTAATG.....................................................................................................................................................................................................................................................	21	1	72.00	72	2	0	1	0	58	11	0
....................................................................TTGGTGAGGG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	21	1	58.00	58	0	0	1	0	46	11	0
..................................................................................................................ATTGGATTAGTTCTCATTAAT......................................................................................................................................................................................................................................................	21	1	37.00	37	1	0	0	0	26	10	0
..................................................................................................................ATTGGATTAGTTCTCATTAATG.....................................................................................................................................................................................................................................................	22	1	23.00	23	0	0	0	0	20	3	0
...................................................................................................................TTGGATTAGTTCTCATTAAT......................................................................................................................................................................................................................................................	20	1	17.00	17	0	0	1	0	9	7	0
...................................................................ATTGGTGAGGG-CATCTCCAATG...................................................................................................................................................................................................................................................................................................	22	1	10.00	10	0	0	0	0	5	5	0
...................................................................ATTGGTGAGGG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	21	1	5.00	5	0	0	0	0	3	2	0
...................................................................................................................TTGGATTAGTTCTCATTAATGCT...................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	0	0	3	1	0
...................................................................................................................TTGGATTAGTTCTCATTAATGCA...................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	2	1	0
....................................................................TTGGTGAGGG-CATCTCCAATGGA--...............................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	2	1	0
....................................................................TTGGTGAGGG-CATCTCCAAT....................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
....................................................................TTGGTGAGGG-CATCTCCAATGGT--...............................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	2	0	0
...................................................................ATTGGTGAGGG-CATCTCCAA.....................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATGT....................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
....................................................................TTGGTGAGGG-CATCTCCAATGGT--T..............................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0	0
....................................................................TTGGTGAGGG-CATCTCCAATGC..................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
....................................................................TTGGTGAGGG-CATCTCCAATGT..................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATT.....................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATC.....................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................ATTGGATTAGTTCTCATTAATGT....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................TTGGATTAGTTCTCATTAATGCC...................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
...................................................................ATTGGTGAGGG-CATCTCCAATT...................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0

dwi_142

scf2_1100000004909:7956784-7956889 +

Known Ortholog

Testes-restricted

intergenic

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-36.9	-36.8	-36.8