ID:

dwi_1334

 Coordinate:

scf2_1100000004521:9059799-9059949 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dwil_GLEANR_15705:2]; CDS [Dwil\GK15455-cds]; intron [Dwil\GK15455-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CACACAGGGCATGCTGGATACCGAACTGTTCGGTCTGGCTGTGCTCATAGGTGAGTTACGTACGAAAAAACTGAAAAAACTGAAAAAAAGGAGAAAAAAATGCCAGCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTTTTAAAAGCTGCTCATCATCATCATCAGCCTCCATCCTCTATTCTCCTTCTGACCAAGAACTCTGCCAAAACACATAAAAATACCAAACATACACACACAC
**************************************************.....................................((((((((....(((((........)))))..........................(((.((((...)))))))..............................))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V118
embryo
......................GAACTGTTCGGTCTGGCTGT................................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0
......................GAACTGTTCGGTCTGGCTGTGCTC............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0
......................GAACTGTTCGGTCTGGCTGTGCTCATAG......................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0
.......................................TGTGCTCATAGGTGAGTTACGTACGA.......................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0
....................CCGAACTCTTTGGTCTGGCTGT................................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0
.......GGCATGCTGGATACCGAACT................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1
.........................GTGTTCGGTCTGGGTATGCTC............................................................................................................................................................................................................. 21 3 2 0.50 1 0 1 0
..............................................................................ACTGGAACAAAGGAGAAAAAA........................................................................................................................................................ 21 2 5 0.20 1 0 0 1
............CCTGGAAACCGATCTGTTC............................................................................................................................................................................................................................ 19 3 13 0.08 1 0 1 0

Anti-sense strand reads

GTGTGTCCCGTACGACCTATGGCTTGACAAGCCAGACCGACACGAGTATCCACTCAATGCATGCTTTTTTGACTTTTTTGACTTTTTTTCCTCTTTTTTTACGGTCGCTATTCCGTACTTTTTATGTTGATTATTTGTATTTGGTCAGAAAAATTTTCGACGAGTAGTAGTAGTAGTCGGAGGTAGGAGATAAGAGGAAGACTGGTTCTTGAGACGGTTTTGTGTATTTTTATGGTTTGTATGTGTGTGTG
**************************************************.....................................((((((((....(((((........)))))..........................(((.((((...)))))))..............................))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
........CGGACGACCTATCGCTTGA................................................................................................................................................................................................................................ 19 2 2 0.50 1 1
.......................................................................................................................................GTTATTTGGTCAGAAAAATTG............................................................................................... 21 3 10 0.10 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004521:9059749-9059999 + dwi_1334 CACACAGGGCATGCTGGATACCGAACTGTTCGGTCTGGCTGTGCTCATAGGTGAGTTACGTA---------------CG---AAAAAACTGAAAAAACTGAA------------------AAAAAGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------AAAA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCT-TT----------------------------------TTAAAAGCTGCTCATCATCATCATC-----------------------------------------------AGCCTCCATCCTCTAT-------------------------------------------------TCTCC-TTCTGACCAA-GAACTCTGCCAAAACACATAAAAATACCAAACATA-CACACACAC
droVir3 scaffold_12963:18846279-18846352 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCT-TT----------------------------------TTAAAAGCTGCTCATCATCATCAGCCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:24322876-24322949 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCT-TT----------------------------------TTAAAAGCTGCTCATCATCATCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:3903682-3903874 - AAATAACTAAA-----------------------------------------------------------C-----------------------AAGCTAAAAAAAAAGAAAAAAAA---AAAAAGAAAAAAAAAAGAATTGAGTAAATATTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTAATAACTATAAATAATTCTCATCTTCTCTTTTGCATACGCCCATCTCATTTGCAT-CTAATTACCAATCAACAA---AACAAATAACAACAACAATA--------------------------A----------------------------------------------------------------------------------------------TTACAACTAATATATATATATA--------------T
dp5 4_group3:1192903-1193135 - CACGCAGGGTATGCTGGACACCGAACTGTTCGGTCTGGCAGTGCTCATAGGTAAGATGTGCA---------------CG---AGTAT--------------------------------------------ATGGCCTATCCAGCAGGAATTTATCCAGCGGATGGTAGCTAGAGATGCAGTT---------------GG-------AGG-----GGGGC-ACCA---------------------------------------TA--------G-TTTGGAGTAGCCA-AATGCCAGGCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT---------------------------------TTTAAAAGCTGCTCATCATCATCATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:2663639-2663869 - CACGCAGGGTATGCTGGACACCGAACTGTTCGGTCTGGCAGTGCTCATAGGTAAGATATGCA---------------CG---AGTAT--------------------------------------------ATGGCCTATGGA--TGGAATTTATCCAGCGGATGGTAGCTAGAGATGCAGTT---------------GG-------AGG-----GGGGC-ACCA---------------------------------------TA--------G-TTTGGAGTAGCCA-AATGCCAGGCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT---------------------------------TTTAAAAGCTGCTCATCATCATCATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:4809915-4810260 - dan_973 CACGCAAGGGATGCTGGACACCGAACTCTTTGGTCTGGCTGTGCTCATAGGTGAGTCTACCACTTAAG--CTTTCTTCCCAAAAA--------------------AAACAAAAAAAAAGAAAATAGCAAAA----------------------------------------------------------------------------------------------A----AAA------------T------------GTGTCCGA--------GTTGCAGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCATCA---GAA-G----------TAGAAGAGGCATCAGCCTCCATCCGCCATCCGCCAACCGCCATCCGCCATC-------CTCCATTCTCGATCCACGATCCTCCAT--------------TCTGCCAAAACACATAAAAATACCAA-CACACA--------
droBip1 scf7180000395654:226431-226744 + CACGCAAGGGATGCTGGACACCGAACTCTTTGGTCTGGCTGTGCTCATAGGTGAGTCTACCACTTAAG--CTTTCTTCC---AAA--------------------AAATAAAAAAAA---ATATAGGAAA-----------------------------------------------------------------------------------------------------AA------------T------------GTGTCCGA--------GTTGCAGAGTAGCCA-AATGCCT-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCATCAGAA-G----------TAGAAGAGGCATCAGCCTCCATCCTCCATG----------------------------CTCCATTCTCGATCCACGATCCTCCAT--------------TCTGCCAAAACACATAAAAATACCAA-C-------------
droKik1 scf7180000302270:712384-712699 - CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCT-------------------------------------------------------------------------------AGGGAGTGGGAATTTCTC------------------------------------------TGTGGGAT-------AAGGTTA---------CAGATGTGTCCAA---------------------------------ATGAAGAGTAGCCAAAATGCCA-GCGATAAGGCACGAAAAGTACAACTAATAAACATAAACCAGTCTTCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCAGCAGCGAGGAGCAGTGAGAAGCAGGAGATTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA-CACAGCAAAGCTAC
droFic1 scf7180000453904:712071-712434 + CACGCAAGGGATGCTGGACACCGAGCTCTTCGGTCTGGCTGTGCTCATAGGTGAGTAGCGCACTC--------------------------------------------------------------------------------------CTC-------------------------AGTCCGCA--GTCC-GCT-------TTCTGG-----GGTTCC----AG----GTTGCAGCCAG-T-C------------GTTTCCGAGTTGCCGAG-TTGCGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCCGCAGCAGCAGCAGCA---AAA-A----------GAGCGGAAGATTCAGCCTCCATTCTCCATCCTGCAACCTCCATCTACCATCGACCATCGACCATCCACCATCTACCATCCTCGATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droEle1 scf7180000491026:394568-394879 - CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCG-----------------------------------------------------------------------------------------AATCTC-------------------------AA------T---C------TCTGGCGTTC-------CGTTCC----AG----GTTTTA------TTT------------GTATCCGA--------TCTCTGGAGTAGCCA-AATGCCA-GCGATAAGGCA-GAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAACAGCAGCAGCAGCAGAGGCAGCG-G----------CAGCAGAAGATTCAGTCTC-----TCCATC----------------------------CACCATCCACCAGCCACCATCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droRho1 scf7180000779917:221021-221292 - CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTTTC------------------------------------------------------------------------------------------------------------------------AG------T----------------TTCTGG-----GGTTCC----AG----GTTGTATCCAG-TTC------------GTTTCCGA--------GCCGTGGAGTAGCCA-AATGCCA-TCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAAAAGCAGCAGCAGCAG-----------------------AAGAAGAATCAGCCTCCA--------------------------------------------------------TCCTCCATGCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droBia1 scf7180000302261:3400192-3400470 - CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCTC---------TC------------------------------------------------------------------------------------------------------------------CGGG----------------ATTCGG-----GGTTCC----AG----GTTGTGTCCAGCTCG------------GACCCAGA--------GTTGCGGAGTAGCCG-AATGCCA-GCGATAAGGCATGAAAAGTACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCGACGGCGGCAGCAGCA--------------------GCAGAGGATTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droTak1 scf7180000413017:70356-70658 - CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCT---------------------------------------------------------------------------------GGTCTGGG------------------------------------------TTTCTCTCCA-------TGG-----GGCTCT----TGGA--------CCCAG-TTTGTTACCCAGTTTGCA----------------GCCGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCGGCAGCAGCAGCGGCAGAAGAA-G----------CTGCAGAAGATTCAGCCTCCATCCACCA-------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droEug1 scf7180000409554:1169327-1169625 + CACGCAAGGGATGCTGGACACCGAACTGTTCGGTCTGGCTGTGCTCATAGGTGAGTCTC---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TGTTGT-----GGTTCC----AC----GTAGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCTA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCAGCAGCA-GGAGCAG----CAGCAGCAAATTCAGTCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA-CACAGC--------
dm3 chr2L:438678-438973 + CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTAAGTCCA---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGATTTC----AAGTCAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCTA-GCGATAAGGCCTGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGAAGCAGCAGCAGCAGCA-G----------CGGCAGAGGACTCAGCCTCCA--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droSim2 2l:411508-411797 + dsi_16443 CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCA---------AG------------------------------------------------------------------------------------------------------------------GCGG----------------TTCTGGGAGGGGGTTTC----AAGTCAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGCAGCAGCAGCA-------G----------CGGCAGAGGACTCAGCCTCCA--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droSec2 scaffold_14:422398-422681 + CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTAAGTCCA---------AG------------------------------------------------------------------------------------------------------------------GCGG----------------TTCTGGGAGGGGGTTTT----AAGTCAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGCAGCAGCGG-----------------------CAGAGGACTCAGCCTCCA--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droYak3 2L:423483-423779 + dya_194 CACGCAAGGGATGCTGGACACCGAACTATTCGGTCTGGCTGTGCTCATAGGTAAGTCCA---------TG------------------------------------------------------------------------------------------------------------------GCGGTGTTT-GCT-------ATTTGG-----GGTTCC----AAGACAGTTGCGTCCAGTTTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCA---GTA-A----------CAGCAGAAGACTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------
droEre2 scaffold_4929:491059-491340 + CACGCAAGGGATGCTGGACACCGAACTATTTGGTCTGGCTGTGCTCATAGGTGAGTCCA---------TG------------------------------------------------------------------------------------------------------------------GCGG----------------TTTTGG-----GGTTCC----AAGACAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-CCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGCATCATCAGCA--------------------GCAGAAGATTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CACACAGGGCATGCTGGATACCGAACTGTTCGGTCTGGCTGTGCTCATAGGTGAGTTACGTA---------------CG---AAAAAACTGAAAAAACTGAA------------------AAAAAGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------AAAA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCT-TT----------------------------------TTAAAAGCTGCTCATCATCATCATC-----------------------------------------------AGCCTCCATCCTCTAT-------------------------------------------------TCTCC-TTCTGACCAA-GAACTCTGCCAAAACACATAAAAATACCAAACATA-CACACACACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................GAACTGTTCGGTCTGGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200
......................GAACTGTTCGGTCTGGCTGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
......................GAACTGTTCGGTCTGGCTGTGCTCATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.......................................TGTGCTCATAGGTGAGTTACGTA---------------CG---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.......GGCATGCTGGATACCGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCT-TT----------------------------------TTAAAAGCTGCTCATCATCATCAGCCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCT-TT----------------------------------TTAAAAGCTGCTCATCATCATCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAATAACTAAA-----------------------------------------------------------C-----------------------AAGCTAAAAAAAAAGAAAAAAAA---AAAAAGAAAAAAAAAAGAATTGAGTAAATATTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTAATAACTATAAATAATTCTCATCTTCTCTTTTGCATACGCCCATCTCATTTGCAT-CTAATTACCAATCAACAA---AACAAATAACAACAACAATA--------------------------A----------------------------------------------------------------------------------------------TTACAACTAATATATATATATA--------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CACGCAGGGTATGCTGGACACCGAACTGTTCGGTCTGGCAGTGCTCATAGGTAAGATGTGCA---------------CG---AGTAT--------------------------------------------ATGGCCTATCCAGCAGGAATTTATCCAGCGGATGGTAGCTAGAGATGCAGTT---------------GG-------AGG-----GGGGC-ACCA---------------------------------------TA--------G-TTTGGAGTAGCCA-AATGCCAGGCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT---------------------------------TTTAAAAGCTGCTCATCATCATCATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................CACCGAACTGTTCGGTCTGGCAGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040400000000
..................CACCGAACTGTTCGGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
......................GAACTGTTCGGTCTGGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000002
..............TGGACACCGAACTGTTCGGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
...........................GTTCGGTCTGGCAGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..................CACCGAACTGTTCGGTCTGGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........ATGCTGGACACCGAACTGTTCGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
..CGCAGGGTATGCTGGACACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
CACGCAGGGTATGCTGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......GGTATGCTGGACACCGAACTGTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
droPer2
CACGCAGGGTATGCTGGACACCGAACTGTTCGGTCTGGCAGTGCTCATAGGTAAGATATGCA---------------CG---AGTAT--------------------------------------------ATGGCCTATGGA--TGGAATTTATCCAGCGGATGGTAGCTAGAGATGCAGTT---------------GG-------AGG-----GGGGC-ACCA---------------------------------------TA--------G-TTTGGAGTAGCCA-AATGCCAGGCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT---------------------------------TTTAAAAGCTGCTCATCATCATCATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............GCTGGACACCGAACTGTTCGGTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.....................CGAACTGTTCGGTCTGGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droAna3
CACGCAAGGGATGCTGGACACCGAACTCTTTGGTCTGGCTGTGCTCATAGGTGAGTCTACCACTTAAG--CTTTCTTCCCAAAAA--------------------AAACAAAAAAAAAGAAAATAGCAAAA----------------------------------------------------------------------------------------------A----AAA------------T------------GTGTCCGA--------GTTGCAGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCATCA---GAA-G----------TAGAAGAGGCATCAGCCTCCATCCGCCATCCGCCAACCGCCATCCGCCATC-------CTCCATTCTCGATCCACGATCCTCCAT--------------TCTGCCAAAACACATAAAAATACCAA-CACACA--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GAACTCTTTGGTCTGGCTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...GCAAGGGATGCTGGACACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................TCTTTGGTCTGGCTGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................CTTTGGTCTGGCTGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCATCA---GAA-G----------TAGAAGAGG...................................................................................................................................1911.001000010
.................................................................................AAAA--------------------AAACAAAAAAAAAGAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.402011000
.......................................................................................................................................................................................................................................................................................................................................................................................................CATCATCATCATCAGCAGCAGCAGC..................................................................................................................................................................2560.171010000
..................................................................................AAA--------------------AAACAAAAAAAAAGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
............................................................................................................................................................................................................................................................................................................................................................................................................TCATCATCAGCAGCAGCAGCA.................................................................................................................................................................21100.101100000
................................................................................AAAAA--------------------AAACAAAAAAAAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.051001000
...................................................................................AA--------------------AAACAAAAAAAAAGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCAGCAGCAGCA.................................................................................................................................................................20200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCAGCAGC..................................................................................................................................................................18200.051100000
..................................................................................AAA--------------------AAACAAAAAAAAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droBip1
CACGCAAGGGATGCTGGACACCGAACTCTTTGGTCTGGCTGTGCTCATAGGTGAGTCTACCACTTAAG--CTTTCTTCC---AAA--------------------AAATAAAAAAAA---ATATAGGAAA-----------------------------------------------------------------------------------------------------AA------------T------------GTGTCCGA--------GTTGCAGAGTAGCCA-AATGCCT-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCTTCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCATCAGAA-G----------TAGAAGAGGCATCAGCCTCCATCCTCCATG----------------------------CTCCATTCTCGATCCACGATCCTCCAT--------------TCTGCCAAAACACATAAAAATACCAA-C-------------SizeHit CountTotal NormTotal
No Reads
droKik1
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCT-------------------------------------------------------------------------------AGGGAGTGGGAATTTCTC------------------------------------------TGTGGGAT-------AAGGTTA---------CAGATGTGTCCAA---------------------------------ATGAAGAGTAGCCAAAATGCCA-GCGATAAGGCACGAAAAGTACAACTAATAAACATAAACCAGTCTTCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCAGCAGCGAGGAGCAGTGAGAAGCAGGAGATTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA-CACAGCAAAGCTACSizeHit CountTotal NormTotal
No Reads
droFic1
CACGCAAGGGATGCTGGACACCGAGCTCTTCGGTCTGGCTGTGCTCATAGGTGAGTAGCGCACTC--------------------------------------------------------------------------------------CTC-------------------------AGTCCGCA--GTCC-GCT-------TTCTGG-----GGTTCC----AG----GTTGCAGCCAG-T-C------------GTTTCCGAGTTGCCGAG-TTGCGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCCGCAGCAGCAGCAGCA---AAA-A----------GAGCGGAAGATTCAGCCTCCATTCTCCATCCTGCAACCTCCATCTACCATCGACCATCGACCATCCACCATCTACCATCCTCGATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotal
No Reads
droEle1
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCG-----------------------------------------------------------------------------------------AATCTC-------------------------AA------T---C------TCTGGCGTTC-------CGTTCC----AG----GTTTTA------TTT------------GTATCCGA--------TCTCTGGAGTAGCCA-AATGCCA-GCGATAAGGCA-GAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAACAGCAGCAGCAGCAGAGGCAGCG-G----------CAGCAGAAGATTCAGTCTC-----TCCATC----------------------------CACCATCCACCAGCCACCATCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotal
No Reads
droRho1
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTTTC------------------------------------------------------------------------------------------------------------------------AG------T----------------TTCTGG-----GGTTCC----AG----GTTGTATCCAG-TTC------------GTTTCCGA--------GCCGTGGAGTAGCCA-AATGCCA-TCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAAAAGCAGCAGCAGCAG-----------------------AAGAAGAATCAGCCTCCA--------------------------------------------------------TCCTCCATGCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotal
No Reads
droBia1
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCTC---------TC------------------------------------------------------------------------------------------------------------------CGGG----------------ATTCGG-----GGTTCC----AG----GTTGTGTCCAGCTCG------------GACCCAGA--------GTTGCGGAGTAGCCG-AATGCCA-GCGATAAGGCATGAAAAGTACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCGACGGCGGCAGCAGCA--------------------GCAGAGGATTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotal
No Reads
droTak1
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCT---------------------------------------------------------------------------------GGTCTGGG------------------------------------------TTTCTCTCCA-------TGG-----GGCTCT----TGGA--------CCCAG-TTTGTTACCCAGTTTGCA----------------GCCGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCGGCAGCAGCAGCGGCAGAAGAA-G----------CTGCAGAAGATTCAGCCTCCATCCACCA-------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotal
No Reads
droEug1
CACGCAAGGGATGCTGGACACCGAACTGTTCGGTCTGGCTGTGCTCATAGGTGAGTCTC---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TGTTGT-----GGTTCC----AC----GTAGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCTA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCAGCAGCA-GGAGCAG----CAGCAGCAAATTCAGTCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA-CACAGC--------SizeHit CountTotal NormTotal
No Reads
dm3
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTAAGTCCA---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGATTTC----AAGTCAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCTA-GCGATAAGGCCTGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGAAGCAGCAGCAGCAGCA-G----------CGGCAGAGGACTCAGCCTCCA--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAGAAGCAGCAGCA..............................................................................................................................................................21217.503500000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003800000000000000000002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCAGAAGCAGCAG................................................................................................................................................................2128.00160000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000601000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000003000000000000000000
.....................................................................T------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGT.........................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000003100000000
....................................................................TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGA...........................................................................................................................................................................................................................................................................................................................................................................1732.6780000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGAAGCAGCAGC...............................................................................................................................................................2122.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000100002000000000000000000
....................................................................TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGT.........................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAACTCTTCGGTCTGGCTGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................TGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGA........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................TCGGTCTGGCTGTGCTCATAGGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AGTCCGCT----------------------------------CTAAAAGCTGCT...........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTG.....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTCCA---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGG..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTCTTCGGTCTGGCTGTGCTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGAT........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGG..........................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCGGTCTGGCTGTGCTCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CA---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGA..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................CACCGAACTCTTCGGTCTGGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GGACACCGAACTCTTCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTCGGTCTGGCTGTGCTCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACTCTTCGGTCTGGCTGTGCTCATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................CTCTTCGGTCTGGCTGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TAAACCAGTCCGCT----------------------------------CTAAAAGC...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................A---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGA...........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AACTCTTCGGTCTGGCTGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................CACCGAACTCTTCGGTCTGGCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGCTCATAGGTAAGTCCA---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------T.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGA.........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGGC.........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................GAACTCTTCGGTCTGGCTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................TTGCGTCCAG-TTT------------GTTTCCGA--------................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................AGTCCA---------TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGC............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTGGAGTAGCCA-AATGCTA-GC......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................GTCTGGCTGTGCTCATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAAGGGATGCTGGACACCGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GTAGCCA-AATGCTA-GCGA....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AAGGCCTGAAAAATACAACTAATAAA.........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TTC----AAGTCAGTTGCGTCCAG-T..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTGGCTGTGCTCATAGGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAGAAGCAGCAGC...............................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TT------------------------------------------------------------------------------------------------------------------TCGG----------------TTCTGGGGGGGG..........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTGAGTCCA---------AG------------------------------------------------------------------------------------------------------------------GCGG----------------TTCTGGGAGGGGGTTTC----AAGTCAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGCAGCAGCAGCA-------G----------CGGCAGAGGACTCAGCCTCCA--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................TCTTCGGTCTGGCTGTGCTCATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000002000000000
...........TGCTGGACACCGAACTCTTCGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
...........................................CTCATAGGTGAGTCCA---------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCAGCCTCCA--------------------------------------------------------TCCT...........................................................1911.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATCATCATCAGCAGCAGC........................................................................................................................................................................18200.05100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCA-------G----------CGGC........................................................................................................................................21200.05100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA-------G----------CGGCAGAGGACCAT..............................................................................................................................21200.05100000000000001000
droSec2
CACGCAAGGGATGCTGGACACCGAACTCTTCGGTCTGGCTGTGCTCATAGGTAAGTCCA---------AG------------------------------------------------------------------------------------------------------------------GCGG----------------TTCTGGGAGGGGGTTTT----AAGTCAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGCAGCAGCGG-----------------------CAGAGGACTCAGCCTCCA--------------------------------------------------------TCCTCCTTTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................ACTCTTCGGTCTGGCTGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..........................TCTTCGGTCTGGCTGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCAGCAGCAGCAG...................................................................................................................................................................21160.0610100
................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCGG-----------------------CAG......................................................................................................................................21200.0511000
...........................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCAGCAGC.....................................................................................................................................................................18200.0510010
droYak3
CACGCAAGGGATGCTGGACACCGAACTATTCGGTCTGGCTGTGCTCATAGGTAAGTCCA---------TG------------------------------------------------------------------------------------------------------------------GCGGTGTTT-GCT-------ATTTGG-----GGTTCC----AAGACAGTTGCGTCCAGTTTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-GCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCATCAGCAGCAGCAGCAGCA---GTA-A----------CAGCAGAAGACTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................CACCGAACTATTCGGTCTGGCTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...........................ATTCGGTCTGGCTGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.........................CTATTCGGTCTGGCTGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................GAACTATTCGGTCTGGCTGTGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................CACCGAACTATTCGGTCTGGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
CACGCAAGGGATGCTGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
......................................................................................................................................................................................................................................AGTTGCGTCCAGTTTT------------GTTTCCGA--------................................................................................................................................................................................................................................................................................................................2411.00100000010000
...GCAAGGGATGCTGGACACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................CTAAAAGCTGCTCATCATCATCATC..............................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA---GTA-A----------CAGC........................................................................................................................................1890.11101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CATCATCATCAGCAGCAGCAGCA.................................................................................................................................................................23200.05101000000000
droEre2
CACGCAAGGGATGCTGGACACCGAACTATTTGGTCTGGCTGTGCTCATAGGTGAGTCCA---------TG------------------------------------------------------------------------------------------------------------------GCGG----------------TTTTGG-----GGTTCC----AAGACAGTTGCGTCCAG-TTT------------GTTTCCGA--------GTTGTGGAGTAGCCA-AATGCCA-CCGATAAGGCATGAAAAATACAACTAATAAACATAAACCAGTCCGCT----------------------------------CTAAAAGCTGCTCATCATCATCAGCAGCAGCATCATCAGCA--------------------GCAGAAGATTCAGCCTCCA--------------------------------------------------------TCCTCCATTCTGGCCAAAGCGATCTGCCAAAACACATAAAAATACCAA---------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCATCAGCA--------------------GCA.......................................................................................................................................1880.1310000100
.................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCATCATCAGCA--------------------..........................................................................................................................................1980.1310000010
........................................................................................................................................................................................................................................................................................................................................................................................................ATCATCATCAGCAGCAGCA.......................................................................................................................................................................19200.1021000010

Generated: 05/18/2015 at 01:15 AM