ID:

dwi_1326

 Coordinate:

scf2_1100000004521:8311510-8311660 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.6

Flybase annnotation

exon [dwil_GLEANR_14997:2]; CDS [Dwil\GK14693-cds]; intron [Dwil\GK14693-in]

No Repeatable elements found

mature
  1. scf2_1100000003104:5700-5723 -
  2. scf2_1100000004521:8303531-8303554 -
  3. dwi_1324  scf2_1100000004521:8303830-8303853 -
  4. scf2_1100000004521:8304129-8304152 -
  5. dwi_1326  scf2_1100000004521:8311631-8311654 -
star
  1. scf2_1100000003104:5673-5695 -
  2. scf2_1100000004521:8304102-8304124 -
  3. dwi_1326  scf2_1100000004521:8311604-8311626 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAATCGATTGATGGGAAGAAAAGGCAAACAGCCTACGTCAAGATGTTGTGGGACGATGATAGATACGACAGCGCAACGATCGATGGGATTACAGGGAAGTTGGAGGAATTCCTCAGAAAGGATGGCACTTCGGACAATCTAATTGCTTACGGGATTACACAGTTCGCATATTTTATCTAGTATTTCGTACGATTTTATAGGATTGCATTGGTGGTGGTAATGACGATGAACCATCGTCATCAAAACGGGC
********************************************************..................((((..((..((......))..)).))))....************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
 M020
head
..AATCGATTGATGGGAAGAAAAGG.................................................................................................................................................................................................................................. 23 0 2 14.00 28 15 8 5 0 0
........................................................ATGATAGATACGACAGCGCAACGA........................................................................................................................................................................... 24 0 5 12.60 63 53 5 5 0 0
..AATCGATTGATGGGAAGAAAAGGC................................................................................................................................................................................................................................. 24 0 2 8.50 17 8 4 3 2 0
........................................................ATGATAGATACGACAGCGCAACG............................................................................................................................................................................ 23 0 5 4.40 22 10 9 3 0 0
....................................................................................TGGGATTACAGGGAAGTTGGAGG................................................................................................................................................ 23 0 3 4.33 13 11 1 1 0 0
..AATCGATTGATGGGAAGAAAAG................................................................................................................................................................................................................................... 22 0 2 3.50 7 0 5 2 0 0
...........................................................ATAGATACGACAGCGCAACGATCG........................................................................................................................................................................ 24 0 5 3.00 15 10 4 0 0 1
............................................................................................................................................TAATTGCTTACGGGATTACACAGT....................................................................................... 24 0 3 2.67 8 0 8 0 0 0
...........................................................ATAGATACGACAGCGCAACGAT.......................................................................................................................................................................... 22 0 5 2.40 12 4 8 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGT............. 24 0 3 2.33 7 7 0 0 0 0
..........................................................................................TACAGGGAAGTTGGAGGAATTCCTC........................................................................................................................................ 25 0 4 2.25 9 0 9 0 0 0
........................................................ATGATAGATACGACAGCGCAAC............................................................................................................................................................................. 22 0 5 2.20 11 6 3 2 0 0
..........................................................................................................................................................................ATTTTATCTAGTATTTCGTACGAT......................................................... 24 0 2 2.00 4 4 0 0 0 0
........................................................ATGATAGATACGACAGCGCAACGAT.......................................................................................................................................................................... 25 0 5 1.60 8 5 3 0 0 0
..........................................................................................................................................................................ATTTTATCTAGTATTTCGTACGATT........................................................ 25 0 2 1.50 3 3 0 0 0 0
....................................................GACGATGATAGATACGACAGCGC................................................................................................................................................................................ 23 0 5 1.40 7 7 0 0 0 0
........................................................ATGATAGATACGACAGCGCAACGATCGA....................................................................................................................................................................... 28 0 5 1.40 7 6 0 1 0 0
............................................................................................................................................................................................TACGATTTTATAGGATTGCATTGG....................................... 24 0 3 1.33 4 4 0 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTC............ 25 0 3 1.33 4 4 0 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGAGGAA.............................................................................................................................................. 25 0 3 1.33 4 4 0 0 0 0
.................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGGTGG................................. 25 0 4 1.25 5 4 1 0 0 0
...........................................................ATAGATACGACAGCGCAACGATC......................................................................................................................................................................... 23 0 5 1.20 6 5 0 0 0 1
..........................................................................................................................................................................ATTTTATCTAGTATTTCGTACGA.......................................................... 23 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCG.............. 23 0 3 1.00 3 3 0 0 0 0
..AATCGATTGATGGGAAGAAAAGGCAA............................................................................................................................................................................................................................... 26 0 2 1.00 2 1 1 0 0 0
..........GATGGGAAGAAAAGGCAAACAGCCT........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTCA........... 26 0 3 1.00 3 2 1 0 0 0
.................................................................................................................TCAGAAAGGATGGCACTTCGGA.................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................GTAATGACGATGAACCATCGT............. 21 0 3 1.00 3 0 3 0 0 0
..................................................................................................AGTTGGAGGAATTCCTCAGAAAGG................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
......GATTGATGGGAAGAAAAG................................................................................................................................................................................................................................... 18 0 2 1.00 2 0 2 0 0 0
........................................................ATGATAGATACGACAGCGCA............................................................................................................................................................................... 20 0 5 1.00 5 4 0 1 0 0
..........................................................................................................................................................................ATTTTATCTAGTATTTCGTACGATTT....................................................... 26 0 2 1.00 2 2 0 0 0 0
...........................................................ATAGATACGACAGCGCAACGATCGAT...................................................................................................................................................................... 26 0 5 1.00 5 1 4 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGG................................................................................................................................................... 20 0 3 1.00 3 2 1 0 0 0
.................................................................................................................TCAGAAAGGATGGCACTTCGGACAATC............................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.......ATTGATGGGAAGAAAAGGCAAACA............................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAAT............................. 24 0 4 1.00 4 3 1 0 0 0
........................................................ATGATAGATACGACAGCGCAACGATCG........................................................................................................................................................................ 27 0 5 1.00 5 4 1 0 0 0
...........................................................ATAGATACGACAGCGCAACGATCGA....................................................................................................................................................................... 25 0 5 0.80 4 1 3 0 0 0
..................................................................CGACAGCGCAACGATCGATGGGAT................................................................................................................................................................. 24 0 5 0.80 4 4 0 0 0 0
..........................................................................................TACAGGGAAGTTGGAGGAATTCCTCAGA..................................................................................................................................... 28 0 4 0.75 3 1 2 0 0 0
.........................................................................................TTACAGGGAAGTTGGAGGAATTCCT......................................................................................................................................... 25 0 4 0.75 3 0 3 0 0 0
.................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGG.................................... 22 0 4 0.75 3 3 0 0 0 0
................................................................................TCGATGGGATTACAGGGAAGT...................................................................................................................................................... 21 0 3 0.67 2 0 2 0 0 0
...............................GCCTACGTCAAGATGTTGTGG....................................................................................................................................................................................................... 21 0 6 0.67 4 4 0 0 0 0
............................................................................................................................................TAATTGCTTACGGGATTACACAGTTCGCA.................................................................................. 29 0 3 0.67 2 2 0 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCA................. 20 0 3 0.67 2 2 0 0 0 0
.................................................................................................................................................GCTTACGGGATTACACAGTTCGCA.................................................................................. 24 0 3 0.67 2 2 0 0 0 0
......................................................................................................................................................................GCATATTTTATCTAGTATTTCGTA............................................................. 24 0 3 0.67 2 2 0 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGAGGAAT............................................................................................................................................. 26 0 3 0.67 2 2 0 0 0 0
....................................................GACGATGATAGATACGACAGCG................................................................................................................................................................................. 22 0 5 0.60 3 2 1 0 0 0
........................................................ATGATAGATACGACAGCGC................................................................................................................................................................................ 19 0 5 0.60 3 3 0 0 0 0
...........................................................ATAGATACGACAGCGCAACG............................................................................................................................................................................ 20 0 5 0.60 3 3 0 0 0 0
....................................................GACGATGATAGATACGACAGCGCA............................................................................................................................................................................... 24 0 5 0.60 3 3 0 0 0 0
..........................................................GATAGATACGACAGCGCAACGA........................................................................................................................................................................... 22 0 5 0.60 3 1 2 0 0 0
..................................TACGTCAAGATGTTGTGG....................................................................................................................................................................................................... 18 0 7 0.57 4 3 1 0 0 0
.CAATCGATTGATGGGAAGAAAAGG.................................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................TACAGGGAAGTTGGAGGAATTCCT......................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAATG............................ 25 0 4 0.50 2 1 0 1 0 0
.......ATTGATGGGAAGAAAAGGCAAAC............................................................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
..AATCGATTGATGGGAAGAAAAGGCA................................................................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................GTATTTCGTACGATTTTATAGGAT............................................... 24 0 2 0.50 1 1 0 0 0 0
..................................TACGTCAAGATGTTGTGGGACGA.................................................................................................................................................................................................. 23 0 6 0.50 3 2 1 0 0 0
....................................................................................................................................GGACAATCTAATTGCTTACGGGAT............................................................................................... 24 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGGTA............................... 24 0 4 0.50 2 0 2 0 0 0
.........................................................................................TTACAGGGAAGTTGGAGGAATTC........................................................................................................................................... 23 0 4 0.50 2 0 1 1 0 0
.............................................................................................................................................................................TTATCTAGTATTTCGTACGATT........................................................ 22 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................GCATATTTTATCTAGTATTTCGTACGA.......................................................... 27 0 2 0.50 1 1 0 0 0 0
..AATCGATTGATGGGAAGAAAAGGA................................................................................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
..AATCGATTGATGGGAAGAAAAGGCAAAC............................................................................................................................................................................................................................. 28 0 2 0.50 1 0 0 1 0 0
......................................................................................................................................................................................ATTTCGTACGATTTTATAGGATTGC............................................ 25 0 2 0.50 1 0 1 0 0 0
.CAATCGATTGATGGGAAGAAAAG................................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.....................AAGGCAAACAGCCTACGTCAAGATGTTG.......................................................................................................................................................................................................... 28 0 4 0.50 2 0 2 0 0 0
......................................................................................................................................................................GCATATTTTATCTAGTATTTCGTACGAT......................................................... 28 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGGTG.................................. 24 0 4 0.50 2 2 0 0 0 0
....................................................................................................................................GGACAATCTAATTGCTTACGGGATTAC............................................................................................ 27 0 2 0.50 1 1 0 0 0 0
.........................................................................................TTACAGGGAAGTTGGAGGAATTCCTC........................................................................................................................................ 26 0 4 0.50 2 0 2 0 0 0
....................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGG................................. 22 0 4 0.50 2 0 2 0 0 0
.............................................................................................................................................................................TTATCTAGTATTTCGTACGATTTTA..................................................... 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................GTATTTCGTACGATTTTATAGGA................................................ 23 0 2 0.50 1 1 0 0 0 0
.......ATTGATGGGAAGAAAAGGCAAA.............................................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................GGACAATCTAATTGCTTACGGGA................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................GTATTTCGTACGATTTTATAGGATTGCA........................................... 28 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGGT................................... 23 0 4 0.50 2 2 0 0 0 0
.......ATTGATGGGAAGAAAAGGCAA............................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
.......ATTGATGGGAAGAAAAGGCAAT.............................................................................................................................................................................................................................. 22 1 2 0.50 1 0 1 0 0 0
.............................CAGCCTACGTCAAGATGTTGT......................................................................................................................................................................................................... 21 0 4 0.50 2 0 2 0 0 0
..AATCGATTGATGGAAAGAAAAGG.................................................................................................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0 0
......................................TCAAGATGTTGTGGGACGATGATAGA........................................................................................................................................................................................... 26 0 5 0.40 2 1 1 0 0 0
............................................TGTTGTGGGACGATGATAGAT.......................................................................................................................................................................................... 21 0 5 0.40 2 1 0 1 0 0
..................................TACGTCAAGATGTTGTGGGACGATG................................................................................................................................................................................................ 25 0 5 0.40 2 2 0 0 0 0
..................................................................CGACAGCGCAACGATCGATGGG................................................................................................................................................................... 22 0 5 0.40 2 1 1 0 0 0
.........................................................TGATAGATACGACAGCGCAACGA........................................................................................................................................................................... 23 0 5 0.40 2 2 0 0 0 0
..................................................................CGACAGCGCAACGATCGATGGGA.................................................................................................................................................................. 23 0 5 0.40 2 1 1 0 0 0
......................................TCAAGATGTTGTGGGACGATGATA............................................................................................................................................................................................. 24 0 5 0.40 2 1 1 0 0 0
................................................................TACGACAGCGCAACGATCGATGGGA.................................................................................................................................................................. 25 0 5 0.40 2 0 1 0 1 0
.............................................................AGATACGACAGCGCAACGATCGA....................................................................................................................................................................... 23 0 5 0.40 2 2 0 0 0 0
...........................................................ATAGATACGACAGCGCAACGA........................................................................................................................................................................... 21 0 5 0.40 2 1 1 0 0 0
.............................................................AGATACGACAGCGCAACGATCG........................................................................................................................................................................ 22 0 5 0.40 2 2 0 0 0 0
..................................TACGTCAAGATGTTGTGGGACGATGA............................................................................................................................................................................................... 26 0 5 0.40 2 0 2 0 0 0
................................................................TACGACAGCGCAACGATCGATGGG................................................................................................................................................................... 24 0 5 0.40 2 1 1 0 0 0
..........................................................................................................................................TCTAATTGCTTACGGGATTACACAGT....................................................................................... 26 0 3 0.33 1 0 1 0 0 0
....................................................................................................................................................................................................................CGTTGGTAATGACGATGAACCATCGTCA........... 28 2 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................................GGTGGTGGTAATGACGATGAAC................... 22 0 3 0.33 1 1 0 0 0 0
..................................................................CGACAGCGCAACGATCGATGG.................................................................................................................................................................... 21 0 6 0.33 2 2 0 0 0 0
..AATCGATTGGTGGGAAGAAAAGGC................................................................................................................................................................................................................................. 24 1 3 0.33 1 0 0 1 0 0
.........................................................................................................................................ATCTAATTGCTTACGGGATTAC............................................................................................ 22 0 3 0.33 1 1 0 0 0 0
..........................................................................CAACGATCGATGGGATTACAGGGA......................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
........................................................................................................................................AATCTAATTGCTTACGGGATT.............................................................................................. 21 0 3 0.33 1 0 1 0 0 0
.................................................................................................................................................GCTTACGGGATTACACAGTTCG.................................................................................... 22 0 3 0.33 1 1 0 0 0 0
.....................................................................................GGGATTACAGGGAAGTTGGAGGA............................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
................................................................................................................................................................................................................TTGGTGGTGGTAATGACGATGAAC................... 24 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................................CTAATTGCTTACGGGATTACACAGT....................................................................................... 25 0 3 0.33 1 0 1 0 0 0
.................................................................................................................................................GCTTACGGGATTACACAGT....................................................................................... 19 0 3 0.33 1 0 1 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGATGAA.............................................................................................................................................. 25 1 3 0.33 1 1 0 0 0 0
............................................................................................................................................................................................TACGATTTTATAGGATTGCATTGGTGG.................................... 27 0 3 0.33 1 1 0 0 0 0
............................................................................................................................................TAATTGCTTAGGGGATTACACA......................................................................................... 22 1 3 0.33 1 1 0 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGA.................................................................................................................................................. 21 0 3 0.33 1 0 1 0 0 0
...............................................................................ATCGATGGGATTACAGGGAAGTTGG................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGAG................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0
..............................................................................................................................................ATTGCTTACGGGATTACACAG........................................................................................ 21 0 3 0.33 1 1 0 0 0 0
..................................TACGTCAAGATGTTGTGGGAC.................................................................................................................................................................................................... 21 0 6 0.33 2 2 0 0 0 0
.............................................................................CGATCGATGGGATTACAGGGAAGT...................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................................ATTTTATCTAGTATTTCGTACG........................................................... 22 0 3 0.33 1 1 0 0 0 0
...............................GCCTACGTCAAGATGTTGTGGGACGA.................................................................................................................................................................................................. 26 0 6 0.33 2 1 1 0 0 0
............................................................................................................................................TAATTGCTTACGGGATTACACAGTTCG.................................................................................... 27 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGGTAATGACGATGAACCATCGT............. 23 0 3 0.33 1 1 0 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTCAA.......... 27 1 3 0.33 1 1 0 0 0 0
.................................CTACGTCAAGATGTTGTGGGA..................................................................................................................................................................................................... 21 0 6 0.33 2 0 0 2 0 0
...................................................................................ATGGGATTACAGGGAAGTTGG................................................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0
..................................................................................GATGGGATTACAGGGAAGTTGGA.................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
.................................................................................................................................................................................................................TGGTGGTGGTAATGACGATGAACCATCG.............. 28 0 3 0.33 1 1 0 0 0 0
..................................TACGTCAAGATGTTGTGGGACG................................................................................................................................................................................................... 22 0 6 0.33 2 2 0 0 0 0
............................................................................................................................................................................................TACGATTTTATAGGATTGCATTGGTG..................................... 26 0 3 0.33 1 1 0 0 0 0
......................................................................................................................................................................GCATATTTTATCTAGTATTTCGTAC............................................................ 25 0 3 0.33 1 1 0 0 0 0
.......................................................................................GATTACAGGGAAGTTGGAGCAATTC........................................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0
......................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTCAT.......... 27 0 3 0.33 1 1 0 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGAGGATA............................................................................................................................................. 26 2 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................................GGTGGTGGTAATGACGATGAACC.................. 23 0 3 0.33 1 1 0 0 0 0
.................................................................................................................................................GCTTACGGGATTACACAGTTCGC................................................................................... 23 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGGTAATGACGATGAACCATCG.............. 22 0 3 0.33 1 1 0 0 0 0
..................................................................................GATGGGATTACAGGGAAGTTG.................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
......................................................................................................................................................................GCATATTTTATCTAGTATTTCGT.............................................................. 23 0 3 0.33 1 1 0 0 0 0
....................................................................................TGGGATTACAGGGAAGTTGGAGGA............................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
..................................TACGTCAAGATGTTGTGGGA..................................................................................................................................................................................................... 20 0 7 0.29 2 1 1 0 0 0
..................................TACGTCAAGATGTTGTGGG...................................................................................................................................................................................................... 19 0 7 0.29 2 2 0 0 0 0
..................................................................................................................................................................................................TTTATAGGATTGCATTGGTGGT................................... 22 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAATGA........................... 26 0 4 0.25 1 1 0 0 0 0
...............................................................................................................................................................................................................ATTGGTGGTGGTAATGACGAT....................... 21 0 4 0.25 1 0 1 0 0 0
..........................................................................................TACAGGGAAGTTGGAGGAATTCA.......................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0
....................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGGTAA.............................. 25 0 4 0.25 1 0 1 0 0 0
............................................................................................................................................................................................................TGCATTGGTGGTGGTAATGACGA........................ 23 0 4 0.25 1 1 0 0 0 0
.........................................................................................TTACAGGGAAGTTGGAGGAATT............................................................................................................................................ 22 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................TTACACAGTTCGCATATTTTA........................................................................... 21 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................................................................TGGTGGTGGTAATGACGATGA..................... 21 0 4 0.25 1 1 0 0 0 0
..........................................................................................TACAGGGAAGTTGGAGGAATCCCTC........................................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0
.....................................................................................................................................................................................................GTAGGATTGCATTGGTGGTGGTAATG............................ 26 1 4 0.25 1 1 0 0 0 0
...............................................................................................................................ACTTCGGACAATCTAATTGCTTAAA................................................................................................... 25 2 4 0.25 1 1 0 0 0 0
.....................................................................................................................................................................................................ATAGGATTGCATTGGTGGT................................... 19 0 4 0.25 1 1 0 0 0 0
......................AGGCAAACAGCCTACGTCAAGA............................................................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGG................................. 20 0 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................GGGATTACACAGTTCGCATATTT............................................................................. 23 0 4 0.25 1 1 0 0 0 0
........................................................................................ATTACAGGGAAGTTGGAGGAATTCCTC........................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0
...........................AACAGCCTACGTCAAGATGTTGTGGG...................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................................................................................TTATAGGATTGCATTGGTGGTGG................................. 23 0 4 0.25 1 0 1 0 0 0
...............................................................................................................................ACTTCGGACAATCTAATTGCTTACG................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
...........................................................................................ACAGGGAAGTTGGAGGAATTCCTC........................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
...............................................................................................................................ACTTCGGACAATCTAATTGCTTAT.................................................................................................... 24 1 4 0.25 1 0 1 0 0 0
..........................................................................................TACAGGGAAGTTGGAGGAATTCCTCTA...................................................................................................................................... 27 2 4 0.25 1 0 0 1 0 0
...............................................................................................................................ACTTCGGACAATCTAATTGCTT...................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGT................................ 21 0 4 0.25 1 0 1 0 0 0
.....................AAGGCAAACAGCCTACGTCAAGATG............................................................................................................................................................................................................. 25 0 4 0.25 1 0 1 0 0 0
.........................................................................................TTACAGGGAAGTTGGAGGAATTCC.......................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................................................TTTTATAGGATTGCATTGGTG..................................... 21 0 4 0.25 1 0 1 0 0 0
................................................................................................................................CTTCGGACAATCTAATTGCTTACG................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
....................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGGTAAT............................. 26 0 4 0.25 1 0 1 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAA.............................. 23 0 4 0.25 1 1 0 0 0 0
...............................................................................................................................................................ACAGTTCGCATATTTTATCTAGTATT.................................................................. 26 0 4 0.25 1 1 0 0 0 0
........................................................................................ATTACAGGGAAGTTGGAGGAATT............................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0
.......................GGCAAACAGCCTACGTCAAGATGTTG.......................................................................................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0
..........................................................................................................................................................................................................ATTGCATTGGTGGTGGTAATGACG......................... 24 0 4 0.25 1 1 0 0 0 0
........................................................................................................................................................GGATTACACAGTTCGCATATTTTATC......................................................................... 26 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTA............................... 22 0 4 0.25 1 0 1 0 0 0
.................................................................................................................................................................................................TTTTATAGGATGGCATTGGTGGTGG................................. 25 1 4 0.25 1 1 0 0 0 0
...................................................................................................................................................................................................TTATAGGATTGCATTGGTGG.................................... 20 0 4 0.25 1 0 1 0 0 0
.................................................................ACGACAGCGCAACGATCGATGGGAT................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0
..........................................................GATAGATACGACAGCGCAACGATCGAT...................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................................................GGATTGCATTGGTGGTGGTA............................... 20 0 5 0.20 1 1 0 0 0 0
...............................................TGCGGGACGATGATAGATACGACAGTA................................................................................................................................................................................. 27 3 5 0.20 1 0 1 0 0 0
....................................................GACGATGATAGATACGACAGCGCAACG............................................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0
............................................................TAGATACGACAGCGCAACGAT.......................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
......................................TCAAGATGTTGTGGGACGATGATAG............................................................................................................................................................................................ 25 0 5 0.20 1 0 1 0 0 0
........................................................ATGATAGATACGACAGCACAAC............................................................................................................................................................................. 22 1 5 0.20 1 1 0 0 0 0
..........................................................................................................................................................................................................ATTGCATTGGTGGTGGTAATG............................ 21 0 5 0.20 1 0 1 0 0 0
...............................................TGTGGGACGATGATAGATACGAC..................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0
....................................................GACGATGATAGTTACGACAGCGCA............................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0
......................................................CGATGATAGATACGACAGCGCAACGA........................................................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0
...............................................TGTGGGACGATGATAGATACGA...................................................................................................................................................................................... 22 0 5 0.20 1 0 1 0 0 0
..........................................................GATAGATACGACAGCGCAACGAT.......................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0
................................................................TACGACAGCGCAACGATCGATGGGAT................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0
............................................................TAGATACGACAGCGCAACGATCGATG..................................................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0
..........................................................GATAGATACGACAGCGCAACGATCG........................................................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGGCAGCGCAACGA........................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGACAGCG................................................................................................................................................................................. 18 0 5 0.20 1 1 0 0 0 0
...........................................................ATAGATACGACAGCGCAACGATCGATGG.................................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGACAGCGCAACGATAT........................................................................................................................................................................ 27 2 5 0.20 1 0 1 0 0 0
............................................................TAGATACGACAGCGCAACGATCGA....................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
...........................................................................................................................................................................................................TTGCATTGGTGGTGGTAATGA........................... 21 0 5 0.20 1 0 1 0 0 0
...............................................TGTGGGACGATGATAGATACGACAG................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
...........................................................ATAGATACGACAGAGCAACGATCG........................................................................................................................................................................ 24 1 5 0.20 1 0 1 0 0 0
.......................................................................................................................................................................................................AGGATTGCATTGGTGGTGGTAA.............................. 22 0 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACAACAGCGCAACG............................................................................................................................................................................ 23 1 5 0.20 1 1 0 0 0 0
...................................................................GACAGCGCAACGATCGATGGGA.................................................................................................................................................................. 22 0 5 0.20 1 0 1 0 0 0
...........................................................ATAGATACGACAGCGCAACGAAA......................................................................................................................................................................... 23 2 5 0.20 1 0 1 0 0 0
........................................................ATGATAGATACGACAGCGCAACT............................................................................................................................................................................ 23 1 5 0.20 1 1 0 0 0 0
...........................................................ATAGATACGACAGCGCAAC............................................................................................................................................................................. 19 0 5 0.20 1 0 1 0 0 0
............................................................TAGATACGACAGCGCAACGATCG........................................................................................................................................................................ 23 0 5 0.20 1 0 1 0 0 0
.........................................................TGATAGATACGACAGCGCAAC............................................................................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGACAGCGCAACGAAAA........................................................................................................................................................................ 27 3 5 0.20 1 1 0 0 0 0
..........................................................GATAGATACGACAGCGCAA.............................................................................................................................................................................. 19 0 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGACAGCGCAACGATA......................................................................................................................................................................... 26 1 5 0.20 1 0 0 1 0 0
..................................................................CGACAGCGCAACGATCGATCGGAT................................................................................................................................................................. 24 1 5 0.20 1 1 0 0 0 0
....................................................GACGATGATAGATACGACGGCGC................................................................................................................................................................................ 23 1 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGACAGCGCAACGATC......................................................................................................................................................................... 26 0 5 0.20 1 0 0 1 0 0
..........................................................AATAGATACGACAGCGCAACGAT.......................................................................................................................................................................... 23 1 5 0.20 1 1 0 0 0 0
........................................................ATGATAGATACGACAGCGCAA.............................................................................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0
..........................................................................................TACAGGGAAGTTGGAGAA............................................................................................................................................... 18 1 5 0.20 1 0 1 0 0 0
........................................................ATGATAGATACAACAGCGCAACGA........................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0
.........................................................................................................................................................................................................GATTGCATTGGTGGTGGTAATGAC.......................... 24 0 5 0.20 1 1 0 0 0 0
.........................................................................................................................................................................................................GATTGCATTGGTGGTGGTAAT............................. 21 0 5 0.20 1 0 1 0 0 0
.........................................................TGATAGATACGACAGCGCAACGAT.......................................................................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0
.........................................................TGATAGATACGACAGCGC................................................................................................................................................................................ 18 0 5 0.20 1 1 0 0 0 0
...........................................................ATAGATACGATAGCGCAACGATCGAT...................................................................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0
.........................................................TGATAGATACGACAGCGCAACGAA.......................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0
.....................................................................................GGGATTACAGAGAAGTTGGAG................................................................................................................................................. 21 1 5 0.20 1 1 0 0 0 0
......................................TCAAGATGTTGTGGGACGATG................................................................................................................................................................................................ 21 0 6 0.17 1 0 1 0 0 0
..................................................................CGACAGCGCAACGATCGATG..................................................................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0
.................................CTACGTCAAGATGTTGTGGGACG................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
......................................CCAAGATGTTGTGGGACGATGA............................................................................................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0
...............................GCCTACGTCAAGATGTTGTGGGACG................................................................................................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0
.....................AAGGCAAACTGCCTACGTCAAGATGTTG.......................................................................................................................................................................................................... 28 1 6 0.17 1 0 1 0 0 0
...............................GCCTACGTCAAGATGTTGTGGGA..................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
....................................CGTCAAGATGTTGTGGGACGA.................................................................................................................................................................................................. 21 0 6 0.17 1 1 0 0 0 0
...................................ACGTCAAGATGTTGTGGGACG................................................................................................................................................................................................... 21 0 6 0.17 1 0 1 0 0 0
......................................TCAAGATGTTGTGGGACGATGA............................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0
....................................................GACGATGATAGATACGAA..................................................................................................................................................................................... 18 1 6 0.17 1 1 0 0 0 0
................................................................TACGACAGCGCAACGATCGATGG.................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
....................................................................................................................................................................................................................AGGTGGTAATGTCGATGA..................... 18 2 7 0.14 1 1 0 0 0 0
....TCGGTTGATGGGAAGAAGCG................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 1 0 0
........TTGATGGGCAGAAATGGC................................................................................................................................................................................................................................. 18 2 10 0.10 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGATTGCATTGAGGGTGGAAATG............................ 25 3 11 0.09 1 0 1 0 0 0
......................................................................................................................................................................................................................GTGGTAATGTCGATGAGCT.................. 19 3 20 0.05 1 0 0 1 0 0
..................................................GGCACGATTATTGATACGA...................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GGTTAGCTAACTACCCTTCTTTTCCGTTTGTCGGATGCAGTTCTACAACACCCTGCTACTATCTATGCTGTCGCGTTGCTAGCTACCCTAATGTCCCTTCAACCTCCTTAAGGAGTCTTTCCTACCGTGAAGCCTGTTAGATTAACGAATGCCCTAATGTGTCAAGCGTATAAAATAGATCATAAAGCATGCTAAAATATCCTAACGTAACCACCACCATTACTGCTACTTGGTAGCAGTAGTTTTGCCCG
************************************************************************************************************************************************..................((((..((..((......))..)).))))....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
......................................................................................................................................................GCCCTAATGTGTCAAGCGTATAAAAT........................................................................... 26 0 3 362.67 1088 601 449 0 36 2
.........................................TCTACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 25 0 5 316.60 1583 1155 418 0 10 0
.....................................................................GTCGCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 25 0 4 176.00 704 557 129 10 8 0
.........................................TCTACAACACCCTGCTACTATCTATGCT...................................................................................................................................................................................... 28 0 5 137.20 686 332 353 1 0 0
....................................GCAGTTCTACAACACCCTGCTACTAT............................................................................................................................................................................................. 26 0 5 123.20 616 429 186 0 0 1
.......................................................................CGCGTTGCTAGCTACCCTAATGTCCCT......................................................................................................................................................... 27 0 3 89.67 269 168 35 63 3 0
....................................................................TGTCGCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 26 0 4 69.50 278 183 92 0 3 0
............................................ACAACACCCTGCTACTATCTATGCTGT.................................................................................................................................................................................... 27 0 5 68.20 341 184 157 0 0 0
.......................................................................................................................................GTTAGATTAACGAATGCCCTAATGTGT......................................................................................... 27 0 3 62.67 188 57 128 2 0 1
..............................................................................................................................................................GTGTCAAGCGTATAAAATAGATCAT.................................................................... 25 0 4 59.75 239 122 116 0 1 0
......................................................................................................................TTCCTACCGTGAAGCCTGTTAGAT............................................................................................................. 24 0 1 57.00 57 37 20 0 0 0
............................................ACAACACCCTGCTACTATCTATGCT...................................................................................................................................................................................... 25 0 5 54.80 274 74 199 1 0 0
..................................................................GCTGTCGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 26 0 4 54.25 217 145 62 4 6 0
...........................................................................................................................................................AATGTGTCAAGCGTATAAAATAGAT....................................................................... 25 0 4 51.50 206 115 90 0 1 0
................................................................................................................................GAAGCCTGTTAGATTAACGAATGCCCT................................................................................................ 27 0 2 49.00 98 89 8 1 0 0
..............................................................CTATGCTGTCGCGTTGCTAGCTACCCT.................................................................................................................................................................. 27 0 4 47.75 191 155 31 3 2 0
.......................................................................CGCGTTGCTAGCTACCCTAATGTCCCTT........................................................................................................................................................ 28 0 3 47.33 142 93 20 28 1 0
.............................................................................................................................CGTGAAGCCTGTTAGATTAACGAAT..................................................................................................... 25 0 2 46.00 92 12 75 4 0 1
..................................................................GCTGTCGCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 28 0 4 44.00 176 155 12 3 6 0
..................................................................................................TCAACCTCCTTAAGGAGTCTTTCCT................................................................................................................................ 25 0 1 40.00 40 40 0 0 0 0
.......................................................................................................................................................CCCTAATGTGTCAAGCGTATAAAAT........................................................................... 25 0 4 38.00 152 108 35 0 9 0
...TAGCTAACTACCCTTCTTTTCCGT................................................................................................................................................................................................................................ 24 0 2 34.50 69 34 35 0 0 0
............................TGTCGGATGCAGTTCTACAACACCCT..................................................................................................................................................................................................... 26 0 4 34.00 136 90 31 14 1 0
....................................................................................................................CTTTCCTACCGTGAAGCCTGTTAGAT............................................................................................................. 26 0 1 30.00 30 26 4 0 0 0
......................................................................................................................................................GCCCTAATGTGTCAAGCGTATAAAA............................................................................ 25 0 3 28.00 84 72 10 0 2 0
................................................................................................................................................................................AGATCATAAAGCATGCTAAAATATCCT................................................ 27 0 2 27.50 55 52 2 0 1 0
................................................................................AGCTACCCTAATGTCCCTTCAACCTCCT............................................................................................................................................... 28 0 3 27.33 82 82 0 0 0 0
...........................................................................................................................ACCGTGAAGCCTGTTAGATTAACGAAT..................................................................................................... 27 0 2 26.00 52 17 29 2 4 0
......................................................GCTACTATCTATGCTGTCGCGTTGCT........................................................................................................................................................................... 26 0 5 25.40 127 58 65 0 3 1
.......................................................................................................................................................................................AAAGCATGCTAAAATATCCTAACGT........................................... 25 0 2 24.00 48 41 7 0 0 0
..........................................................................................................................................................TAATGTGTCAAGCGTATAAAATAGAT....................................................................... 26 0 4 22.50 90 25 64 0 1 0
.....................................................................................................................................................TGCCCTAATGTGTCAAGCGTATAAAAT........................................................................... 27 0 3 21.67 65 52 12 0 1 0
......................................................................................................................................................................................................ATCCTAACGTAACCACCACCATTACT........................... 26 0 4 21.50 86 86 0 0 0 0
.......................................GTTCTACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 27 0 5 21.00 105 66 38 1 0 0
...........................TTGTCGGATGCAGTTCTACAACACCCT..................................................................................................................................................................................................... 27 0 4 21.00 84 64 20 0 0 0
......................................AGTTCTACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 28 0 5 20.00 100 81 19 0 0 0
...................................................CCTGCTACTATCTATGCTGTCGCGT............................................................................................................................................................................... 25 0 5 19.60 98 62 36 0 0 0
...TAGCTAACTACCCTTCTTTTCCGTTTGT............................................................................................................................................................................................................................ 28 0 1 19.00 19 16 3 0 0 0
....................TTTCCGTTTGTCGGATGCAGTTCT............................................................................................................................................................................................................... 24 0 4 18.00 72 61 11 0 0 0
....................................GCAGTTCTACAACACCCTGCTACTATCT........................................................................................................................................................................................... 28 0 5 17.40 87 65 22 0 0 0
......................................................................................................................................................................................................ATCCTAACGTAACCACCACCATTACTGC......................... 28 0 3 17.33 52 51 1 0 0 0
......................................................................TCGCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 24 0 4 17.25 69 43 24 1 1 0
......................................................GCTACTATCTATGCTGTCGCGTTGC............................................................................................................................................................................ 25 0 5 17.20 86 35 50 0 1 0
............................................................................................GTCCCTTCAACCTCCTTAAGGAGTCT..................................................................................................................................... 26 0 4 16.75 67 67 0 0 0 0
.........................................TCTACAACACCCTGCTACTATCTA.......................................................................................................................................................................................... 24 0 5 16.60 83 81 2 0 0 0
...TAGCTAACTACCCTTCTTTTCCGTTT.............................................................................................................................................................................................................................. 26 0 2 16.50 33 16 17 0 0 0
............................................................................................GTCCCTTCAACCTCCTTAAGGAGTCTT.................................................................................................................................... 27 0 4 15.50 62 61 0 1 0 0
....................................................................................................................................................................................CATAAAGCATGCTAAAATATCCTAACGT........................................... 28 0 2 15.50 31 26 4 0 1 0
..........................................CTACAACACCCTGCTACTATCTATGCT...................................................................................................................................................................................... 27 0 5 15.40 77 42 34 0 0 1
.........................................TCTACAACACCCTGCTACTATCTATGC....................................................................................................................................................................................... 27 0 5 15.20 76 56 20 0 0 0
....................................................................................................................................................ATGCCCTAATGTGTCAAGCGTATAAAAT........................................................................... 28 0 3 14.33 43 35 8 0 0 0
...................................................CCTGCTACTATCTATGCTGTCGCGTT.............................................................................................................................................................................. 26 0 5 14.20 71 31 40 0 0 0
............................................................................................................................CCGTGAAGCCTGTTAGATTAACGAAT..................................................................................................... 26 0 2 13.00 26 17 8 1 0 0
...............................CGGATGCAGTTCTACAACACCCTGCTAC................................................................................................................................................................................................ 28 0 5 12.80 64 63 1 0 0 0
..............................................................................................................................................TAACGAATGCCCTAATGTGTCAAGCGT.................................................................................. 27 0 3 12.33 37 36 1 0 0 0
.......................................................................................................................................................CCCTAATGTGTCAAGCGTATAAAATAGAT....................................................................... 29 0 4 12.25 49 48 1 0 0 0
...................................TGCAGTTCTACAACACCCTGCTACTAT............................................................................................................................................................................................. 27 0 5 12.00 60 48 11 1 0 0
.............................GTCGGATGCAGTTCTACAACACCCT..................................................................................................................................................................................................... 25 0 4 12.00 48 38 9 0 1 0
........................................................................................................................................................................................................CCTAACGTAACCACCACCATTACTGC......................... 26 0 4 11.50 46 46 0 0 0 0
..............................................................................................CCCTTCAACCTCCTTAAGGAGTCTTT................................................................................................................................... 26 0 4 11.25 45 44 1 0 0 0
..........................................................................GTTGCTAGCTACCCTAATGTCCCTT........................................................................................................................................................ 25 0 3 11.00 33 27 4 2 0 0
.....................................................................GTCGCGTTGCTAGCTACCCTAATG.............................................................................................................................................................. 24 0 4 11.00 44 44 0 0 0 0
................................................................................................................................GAAGCCTGTTAGATTAACGAATGCCC................................................................................................. 26 0 2 10.50 21 21 0 0 0 0
..................................................................GCTGTCGCGTTGCTAGCTACCCTAA................................................................................................................................................................ 25 0 4 10.00 40 31 8 1 0 0
.....................................................................GTCGCGTTGCTAGCTACCCTAATGTCCCT......................................................................................................................................................... 29 0 3 10.00 30 17 0 12 1 0
.......................................................................................................................................................................................................TCCTAACGTAACCACCACCATTACTGC......................... 27 0 4 10.00 40 38 2 0 0 0
.............................................................................................................................................................TGTGTCAAGCGTATAAAATAGATCAT.................................................................... 26 0 4 9.75 39 23 16 0 0 0
...........................TTGTCGGATGCAGTTCTACAACAC........................................................................................................................................................................................................ 24 0 4 9.75 39 36 3 0 0 0
............................................................................................................................................................................................................ACGTAACCACCACCATTACTGCTACTT.................... 27 0 4 9.50 38 35 3 0 0 0
.................................................ACCCTGCTACTATCTATGCTGTCGCGT............................................................................................................................................................................... 27 0 5 9.40 47 35 12 0 0 0
....................................GCAGTTCTACAACACCCTGCTACTA.............................................................................................................................................................................................. 25 0 5 9.40 47 46 1 0 0 0
..................................................................GCTGTCGCGTTGCTAGCTACCCT.................................................................................................................................................................. 23 0 5 9.00 45 26 13 3 3 0
..............................................................................................CCCTTCAACCTCCTTAAGGAGTCT..................................................................................................................................... 24 0 4 9.00 36 36 0 0 0 0
...............................................................................TAGCTACCCTAATGTCCCTTCAACCTCCT............................................................................................................................................... 29 0 3 9.00 27 27 0 0 0 0
..............................................................................................CCCTTCAACCTCCTTAAGGAGTCTT.................................................................................................................................... 25 0 4 8.75 35 35 0 0 0 0
................................GGATGCAGTTCTACAACACCCTGCTAC................................................................................................................................................................................................ 27 0 5 8.60 43 38 5 0 0 0
............................................................................................................................................................ATGTGTCAAGCGTATAAAATAGAT....................................................................... 24 0 4 8.50 34 19 15 0 0 0
..........................................CTACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 24 0 5 8.40 42 27 14 0 1 0
...........................................................................................................................................................................................................AACGTAACCACCACCATTACTGCTACTT.................... 28 0 4 8.25 33 31 2 0 0 0
........................................TTCTACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 26 0 5 8.00 40 29 11 0 0 0
...TAGCTAACTACCCTTCTTTTCCGTT............................................................................................................................................................................................................................... 25 0 2 8.00 16 7 9 0 0 0
..................................................................................................TCAACCTCCTTAAGGAGTCTTTCC................................................................................................................................. 24 0 1 8.00 8 8 0 0 0 0
............................................................................................GTCCCTTCAACCTCCTTAAGGAGTCTTT................................................................................................................................... 28 0 4 8.00 32 32 0 0 0 0
.....................................................................................................................TTTCCTACCGTGAAGCCTGTTAGAT............................................................................................................. 25 0 1 8.00 8 4 4 0 0 0
................................................................ATGCTGTCGCGTTGCTAGCTACCCT.................................................................................................................................................................. 25 0 5 8.00 40 31 4 0 5 0
............................................................................................................................................................................................................................TACTGCTACTTGGTAGCAGTAGTTTT..... 26 0 1 8.00 8 5 3 0 0 0
..................................................CCCTGCTACTATCTATGCTGTCGCGT............................................................................................................................................................................... 26 0 5 7.60 38 27 10 0 1 0
.......................................................................CGCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 23 0 4 7.50 30 20 5 5 0 0
.........................................................................................................................................................................ATAAAATAGATCATAAAGCATGCTAAAAT..................................................... 29 0 2 7.50 15 15 0 0 0 0
...................TTTTCCGTTTGTCGGATGCAGTTCT............................................................................................................................................................................................................... 25 0 4 7.50 30 25 5 0 0 0
.....................................................................GTCGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 23 0 4 7.00 28 18 10 0 0 0
.GTTAGCTAACTACCCTTCTTTTCCGT................................................................................................................................................................................................................................ 26 0 2 7.00 14 14 0 0 0 0
.......TAACTACCCTTCTTTTCCGTTTGTCGGAT....................................................................................................................................................................................................................... 29 0 1 7.00 7 7 0 0 0 0
....................................................................................ACCCTAATGTCCCTTCAACCTCCTT.............................................................................................................................................. 25 0 3 6.67 20 20 0 0 0 0
................................................CACCCTGCTACTATCTATGCTGTCGCGT............................................................................................................................................................................... 28 0 5 6.60 33 31 2 0 0 0
.........................................................................................AATGTCCCTTCAACCTCCTTAAGGAGT....................................................................................................................................... 27 0 4 6.50 26 26 0 0 0 0
................................................................................................................................................ACGAATGCCCTAATGTGTCAAGCGTAT................................................................................ 27 0 3 6.33 19 13 6 0 0 0
............................................................................................GTCCCTTCAACCTCCTTAAGGAGT....................................................................................................................................... 24 0 4 6.25 25 25 0 0 0 0
..............................................................................................................................................................................................................GTAACCACCACCATTACTGCTACTT.................... 25 0 4 6.25 25 10 15 0 0 0
.................................................................................................................................................CGAATGCCCTAATGTGTCAAGCGTAT................................................................................ 26 0 3 6.00 18 10 7 1 0 0
.........................................................................................................................................TAGATTAACGAATGCCCTAATGTGT......................................................................................... 25 0 3 6.00 18 12 6 0 0 0
....AGCTAACTACCCTTCTTTTCCGTTTGT............................................................................................................................................................................................................................ 27 0 1 6.00 6 5 1 0 0 0
.................TCTTTTCCGTTTGTCGGATGCAGT.................................................................................................................................................................................................................. 24 0 1 6.00 6 3 3 0 0 0
................................................................................................................................................................................................................AACCACCACCATTACTGCTACTTGGT................. 26 0 3 6.00 18 16 2 0 0 0
...........................................TACAACACCCTGCTACTATCTATGCT...................................................................................................................................................................................... 26 0 5 5.80 29 15 14 0 0 0
........................................................................................................................................................................................................CCTAACGTAACCACCACCATTACTGCT........................ 27 0 4 5.75 23 23 0 0 0 0
.........................................................................CGTTGCTAGCTACCCTAATGTCCCTT........................................................................................................................................................ 26 0 3 5.67 17 8 9 0 0 0
.......................................................................CGCGTTGCTAGCTACCCTAATGTCCC.......................................................................................................................................................... 26 0 3 5.67 17 17 0 0 0 0
........................................................................................................................................................CCTAATGTGTCAAGCGTATAAAATAGAT....................................................................... 28 0 4 5.50 22 17 5 0 0 0
...........................................................................................TGTCCCTTCAACCTCCTTAAGGAGT....................................................................................................................................... 25 0 4 5.50 22 18 4 0 0 0
...............................CGGATGCAGTTCTACAACACCCTGCT.................................................................................................................................................................................................. 26 0 6 5.17 31 26 5 0 0 0
...................................................................CTGTCGCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 27 0 4 5.00 20 15 5 0 0 0
............................................ACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 22 0 5 5.00 25 10 15 0 0 0
...................................................................CTGTCGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 25 0 4 5.00 20 10 10 0 0 0
......................................................................................................................TTCCTACCGTGAAGCCTGTTAGATTA........................................................................................................... 26 0 1 5.00 5 1 4 0 0 0
..................................................CCCTGCTACTATCTATGCTGTCGCGTT.............................................................................................................................................................................. 27 0 5 5.00 25 12 13 0 0 0
...................................................................................................CAACCTCCTTAAGGAGTCTTTCCTACCGT........................................................................................................................... 29 0 1 5.00 5 5 0 0 0 0
..............................................................................................CCCTTCAACCTCCTTAAGGAGTCTTTCCT................................................................................................................................ 29 0 1 5.00 5 5 0 0 0 0
............................................................................TGCTAGCTACCCTAATGTCCCTTCAAC.................................................................................................................................................... 27 0 3 5.00 15 10 5 0 0 0
..............................................................CTATGCTGTCGCGTTGCTAGCTACCC................................................................................................................................................................... 26 0 4 5.00 20 17 3 0 0 0
...................................................................................TACCCTAATGTCCCTTCAACCTCCT............................................................................................................................................... 25 0 3 5.00 15 12 3 0 0 0
..................................................................................................................................................................CAAGCGTATAAAATAGATCATAAAGCAT............................................................. 28 0 3 4.67 14 11 1 2 0 0
..........................................................................GTTGCTAGCTACCCTAATGTCCCT......................................................................................................................................................... 24 0 3 4.67 14 11 3 0 0 0
.................................................................................................................................................................................GATCATAAAGCATGCTAAAATATCCT................................................ 26 0 2 4.50 9 7 2 0 0 0
...............................................................................................................................TGAAGCCTGTTAGATTAACGAATGCCCT................................................................................................ 28 0 2 4.50 9 9 0 0 0 0
..................................................................GCTGTCGCGTTGCTAGCTACCCTAATG.............................................................................................................................................................. 27 0 4 4.50 18 18 0 0 0 0
...............................CGGATGCAGTTCTACAACACCCTGCTACT............................................................................................................................................................................................... 29 0 5 4.40 22 22 0 0 0 0
.............................................................................................................................................................................................................CGTAACCACCACCATTACTGCTACTT.................... 26 0 4 4.25 17 13 4 0 0 0
................................................CACCCTGCTACTATCTATGCTGTCGC................................................................................................................................................................................. 26 0 5 4.20 21 16 5 0 0 0
......................................................................................................................................................GCCCTAATGTGTCAAGCGTATAAA............................................................................. 24 0 3 4.00 12 11 1 0 0 0
........................................................................GCGTTGCTAGCTACCCTAATGTCCCT......................................................................................................................................................... 26 0 3 4.00 12 8 4 0 0 0
................................................................................................................................................................................AGATCATAAAGCATGCTAAAATATCC................................................. 26 0 2 4.00 8 8 0 0 0 0
..............................................................................................................................GTGAAGCCTGTTAGATTAACGAAT..................................................................................................... 24 0 3 4.00 12 6 5 1 0 0
..................................................................................................................................AGCCTGTTAGATTAACGAATGCCCTAAT............................................................................................. 28 0 2 4.00 8 7 1 0 0 0
............................................................................TGCTAGCTACCCTAATGTCCCTTCAACCT.................................................................................................................................................. 29 0 3 4.00 12 12 0 0 0 0
.............................................................................................................AAGGAGTCTTTCCTACCGTGAAGCCTGT.................................................................................................................. 28 0 1 4.00 4 0 4 0 0 0
.......................................................................................................CTCCTTAAGGAGTCTTTCCTACCGT........................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0
............................................................................................................................................................ATGTGTCAAGCGTATAAAATAGATCAT.................................................................... 27 0 4 4.00 16 4 10 1 1 0
.........................................................................................................................................................................ATAAAATAGATCATAAAGCATGCTAAAA...................................................... 28 0 2 4.00 8 8 0 0 0 0
...................................................................................TACCCTAATGTCCCTTCAACCTCCTT.............................................................................................................................................. 26 0 3 4.00 12 11 1 0 0 0
...........................................................................................................................................................................................................AACGTAACCACCACCATTACTGCTAC...................... 26 0 4 3.75 15 14 1 0 0 0
.........................................................................................................................................................CTAATGTGTCAAGCGTATAAAATAGAT....................................................................... 27 0 4 3.75 15 9 6 0 0 0
...................................................CCTGCTACTATCTATGCTGTCGCGTTGC............................................................................................................................................................................ 28 0 5 3.60 18 16 1 0 1 0
..............................................................................................................................................................................................................GTAACCACCACCATTACTGCTACT..................... 24 0 4 3.50 14 11 3 0 0 0
...............................................................TATGCTGTCGCGTTGCTAGCTACCCT.................................................................................................................................................................. 26 0 4 3.50 14 14 0 0 0 0
...........................................................................................................................................................................AAAATAGATCATAAAGCATGCTAAAAT..................................................... 27 0 2 3.50 7 6 1 0 0 0
.......................................................................................................................................................................................................TCCTAACGTAACCACCACCATTACTGCT........................ 28 0 4 3.50 14 13 1 0 0 0
.............................................................................................................................CGTGAAGCCTGTTAGATTAACGAATGC................................................................................................... 27 0 2 3.50 7 3 4 0 0 0
...............................................ACACCCTGCTACTATCTATGCTGTCGCGT............................................................................................................................................................................... 29 0 5 3.40 17 15 2 0 0 0
.................................................................................GCTACCCTAATGTCCCTTCAACCTCCT............................................................................................................................................... 27 0 3 3.33 10 9 1 0 0 0
..................................................................................................................................................GAATGCCCTAATGTGTCAAGCGTATAA.............................................................................. 27 0 3 3.33 10 8 2 0 0 0
..................................ATGCAGTTCTACAACACCCTGCTACTAT............................................................................................................................................................................................. 28 0 5 3.20 16 14 2 0 0 0
.....................................................TGCTACTATCTATGCTGTCGCGTTGC............................................................................................................................................................................ 26 0 5 3.20 16 5 11 0 0 0
............ACCCTTCTTTTCCGTTTGTCGGAT....................................................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
....................................................................TGTCGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 24 0 4 3.00 12 6 6 0 0 0
.......................................................................................................................TCCTACCGTGAAGCCTGTTAGATTAAC......................................................................................................... 27 0 1 3.00 3 0 3 0 0 0
............................................ACAACACCCTGCTACTATCTATGCTG..................................................................................................................................................................................... 26 0 5 3.00 15 13 2 0 0 0
............................................................................................................TAAGGAGTCTTTCCTACCGTGAAGCCT.................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
.................................................................................................................AGTCTTTCCTACCGTGAAGCCTGTTAG............................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
................................................................................................................................................................................AGATCATAAAGCATGCTAAAATAT................................................... 24 0 2 3.00 6 6 0 0 0 0
......................................................................................................................................................................................................ATCCTAACGTAACCACCACCATTACTG.......................... 27 0 4 3.00 12 12 0 0 0 0
......................................................................................................................................................GCCCTAATGTGTCAAGCGTA................................................................................. 20 0 3 3.00 9 9 0 0 0 0
.......................................................................................................................TCCTACCGTGAAGCCTGTTAGAT............................................................................................................. 23 0 1 3.00 3 0 3 0 0 0
.............................................................................................................................................................................................................CGTAACCACCACCATTACTGCTACT..................... 25 0 4 3.00 12 10 2 0 0 0
........................................................................................................................CCTACCGTGAAGCCTGTTAGAT............................................................................................................. 22 0 1 3.00 3 2 1 0 0 0
.................................................ACCCTGCTACTATCTATGCTGTCGC................................................................................................................................................................................. 25 0 5 3.00 15 9 6 0 0 0
...............................................................................................................GGAGTCTTTCCTACCGTGAAGCCTGT.................................................................................................................. 26 0 1 3.00 3 1 2 0 0 0
......................TCCGTTTGTCGGATGCAGTTCTACAA........................................................................................................................................................................................................... 26 0 4 3.00 12 12 0 0 0 0
......................................................................................................................TTCCTACCGTGAAGCCTGTTAGATTAA.......................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
.............................................CAACACCCTGCTACTATCTATGCTGT.................................................................................................................................................................................... 26 0 5 3.00 15 11 4 0 0 0
..................................................................................................................................AGCCTGTTAGATTAACGAATGCCCT................................................................................................ 25 0 2 3.00 6 6 0 0 0 0
................................................................................................................GAGTCTTTCCTACCGTGAAGCCTGT.................................................................................................................. 25 0 1 3.00 3 2 0 0 1 0
.................................GATGCAGTTCTACAACACCCTGCTAC................................................................................................................................................................................................ 26 0 5 2.80 14 12 2 0 0 0
....................................................CTGCTACTATCTATGCTGTCGCGTT.............................................................................................................................................................................. 25 0 5 2.80 14 4 10 0 0 0
...........................................................................................................................................................................................................AACGTAACCACCACCATTACTGCTACT..................... 27 0 4 2.75 11 10 1 0 0 0
............................................................................TGCTAGCTACCCTAATGTCCCTTCAACC................................................................................................................................................... 28 0 3 2.67 8 7 1 0 0 0
..........................................................................................................................................................................................GCATGCTAAAATATCCTAACGTAACCAC..................................... 28 0 3 2.67 8 7 1 0 0 0
...........................................................................................................................................................................................CATGCTAAAATATCCTAACGTAACCAC..................................... 27 0 3 2.67 8 6 2 0 0 0
......................................................................................................................................................................................................ATCCTAACGTAACCACCACCATTACTGCT........................ 29 0 3 2.67 8 8 0 0 0 0
........................................................................GCGTTGCTAGCTACCCTAATGTCCCTT........................................................................................................................................................ 27 0 3 2.67 8 5 3 0 0 0
.......................................................................................................................................................................................................TCCTAACGTAACCACCACCATTACT........................... 25 0 5 2.60 13 11 2 0 0 0
...........................................................................................................................................................AATGTGTCAAGCGTATAAAATAGATCAT.................................................................... 28 0 4 2.50 10 9 1 0 0 0
............................................................................................................................................................................................................................TACTGCTACTTGGTAGCAGTAGTTT...... 25 0 2 2.50 5 4 1 0 0 0
.....................TTCCGTTTGTCGGATGCAGTTCTACAA........................................................................................................................................................................................................... 27 0 4 2.50 10 9 1 0 0 0
........................................................................................................................................................CCTAATGTGTCAAGCGTATAAAAT........................................................................... 24 0 4 2.50 10 7 3 0 0 0
...........................................................................................................................ACCGTGAAGCCTGTTAGATTAACG........................................................................................................ 24 0 2 2.50 5 4 1 0 0 0
...............................................................................................................................TGAAGCCTGTTAGATTAACGAATGCCC................................................................................................. 27 0 2 2.50 5 5 0 0 0 0
..........................................................................................................................TACCGTGAAGCCTGTTAGATTAAC......................................................................................................... 24 0 2 2.50 5 0 5 0 0 0
.......................................................................................................................................................................................AAAGCATGCTAAAATATCCTAACGTAAC........................................ 28 0 2 2.50 5 5 0 0 0 0
..........................................................................................ATGTCCCTTCAACCTCCTTAAGGAGT....................................................................................................................................... 26 0 4 2.50 10 10 0 0 0 0
.....................................CAGTTCTACAACACCCTGCTACTAT............................................................................................................................................................................................. 25 0 5 2.40 12 8 4 0 0 0
................................................................................AGCTACCCTAATGTCCCTTCAACCTCCTT.............................................................................................................................................. 29 0 3 2.33 7 7 0 0 0 0
.........................................................................CGTTGCTAGCTACCCTAATGTCCCT......................................................................................................................................................... 25 0 3 2.33 7 3 4 0 0 0
....................................................................................ACCCTAATGTCCCTTCAACCTCCT............................................................................................................................................... 24 0 3 2.33 7 7 0 0 0 0
..............................................................................................................................................................GTGTCAAGCGTATAAAATAGATCA..................................................................... 24 0 4 2.25 9 9 0 0 0 0
.........................................TCTACAACACCCTGCTACTAT............................................................................................................................................................................................. 21 0 5 2.20 11 7 4 0 0 0
.....................................CAGTTCTACAACACCCTGCTACTATCTAT......................................................................................................................................................................................... 29 0 5 2.20 11 10 1 0 0 0
..................................................................................................TCAACCTCCTTAAGGAGTCTTTC.................................................................................................................................. 23 0 6 2.17 13 13 0 0 0 0
...............................CGGATGCAGTTCTACAACACCCTGC................................................................................................................................................................................................... 25 0 6 2.17 13 12 1 0 0 0
..................................................................................................TCAACCTCCTTAAGGAGTCTTTCCTAC.............................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
....................................GCAGTTCTACAACACCCTGCTACT............................................................................................................................................................................................... 24 0 5 2.00 10 10 0 0 0 0
....................................................................TGTCGCGTTGCTAGCTACCCTAATG.............................................................................................................................................................. 25 0 4 2.00 8 8 0 0 0 0
..............................................................................................................AGGAGTCTTTCCTACCGTGAAGCCTGT.................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................CCTGTTAGATTAACGAATGCCCTAAT............................................................................................. 26 0 2 2.00 4 4 0 0 0 0
.......................................................................CGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 21 0 4 2.00 8 5 0 3 0 0
.....................................................................................................................................................................................................TATCCTAACGTAACCACCACCATTACT........................... 27 0 4 2.00 8 8 0 0 0 0
..............................................................CTATGCTGTCGCGTTGCTAGCTACCCTAA................................................................................................................................................................ 29 0 4 2.00 8 7 0 1 0 0
..............................................................................................................................................TAACGAATGCCCTAATGTGTCAAGCGTAT................................................................................ 29 0 3 2.00 6 6 0 0 0 0
.......................................................................................................................................GTTAGATTAACGAATGCCCTAATGT........................................................................................... 25 0 3 2.00 6 3 3 0 0 0
.................................................................................................TTCAACCTCCTTAAGGAGTCTTTCCT................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
........................................................................GCGTTGCTAGCTACCCTAATGT............................................................................................................................................................. 22 0 4 2.00 8 4 4 0 0 0
......................................................................................................................................................GCCCTAATGTGTCAAGCGTATA............................................................................... 22 0 3 2.00 6 6 0 0 0 0
....................................GCAGTTCTACAACACCCTGCTACTATC............................................................................................................................................................................................ 27 0 5 2.00 10 5 5 0 0 0
...............................................................................................................................................................................TAGATCATAAAGCATGCTAAAATATCCT................................................ 28 0 2 2.00 4 3 1 0 0 0
.....................................................................................................................TTTCCTACCGTGAAGCCTGTTAGATT............................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
.............................................................................GCTAGCTACCCTAATGTCCCTTCAACCT.................................................................................................................................................. 28 0 3 2.00 6 5 1 0 0 0
........................................................................................................................................................................................AAGCATGCTAAAATATCCTAACGT........................................... 24 0 2 2.00 4 2 2 0 0 0
.......................................................................................................................................................CCCTAATGTGTCAAGCGTATAAAA............................................................................ 24 0 4 2.00 8 8 0 0 0 0
................................................................................................CTTCAACCTCCTTAAGGAGTCTTTCCT................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................ATAAAGCATGCTAAAATATCCTAACGT........................................... 27 0 2 2.00 4 2 2 0 0 0
..............................................................................................................................................................................................................GTAACCACCACCATTACTGCTACTTGGT................. 28 0 3 2.00 6 6 0 0 0 0
......................................................................................................................TTCCTACCGTGAAGCCTGTTAGATTAAC......................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................ACGAATGCCCTAATGTGTCAAGCGT.................................................................................. 25 0 3 2.00 6 3 3 0 0 0
.................TCTTTTCCGTTTGTCGGATGCAGTTCT............................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................................................................TAAAATATCCTAACGTAACCACCACCAT............................... 28 0 3 2.00 6 4 2 0 0 0
...............................................................................................................................................AACGAATGCCCTAATGTGTCAAGCGTAT................................................................................ 28 0 3 2.00 6 6 0 0 0 0
.................................................................................................................AGTCTTTCCTACCGTGAAGCCTGTT................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................................AGCATGCTAAAATATCCTAACGTAACCAC..................................... 29 0 2 2.00 4 4 0 0 0 0
....................................................................................................AACCTCCTTAAGGAGTCTTTCCTACCGT........................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
.....................TTCCGTTTGTCGGATGCAGTTCT............................................................................................................................................................................................................... 23 0 4 2.00 8 5 3 0 0 0
..................................................................................................................................................................................................................................TACTTGGTAGCGGTCGTGTT..... 20 3 11 1.91 21 14 7 0 0 0
.....................................................................GTCGCGTTGCTAGCTACCCT.................................................................................................................................................................. 20 0 5 1.80 9 6 3 0 0 0
................................GGATGCAGTTCTACAACACCCTGCTACT............................................................................................................................................................................................... 28 0 5 1.80 9 9 0 0 0 0
..............................................AACACCCTGCTACTATCTATGCTGT.................................................................................................................................................................................... 25 0 5 1.80 9 5 4 0 0 0
....................................................CTGCTACTATCTATGCTGTCGCGTTGC............................................................................................................................................................................ 27 0 5 1.80 9 7 2 0 0 0
...............................................................................................CCTTCAACCTCCTTAAGGAGTCTTT................................................................................................................................... 25 0 4 1.75 7 7 0 0 0 0
....................................................................................................................................................................................................ATATCCTAACGTAACCACCACCATTACT........................... 28 0 4 1.75 7 7 0 0 0 0
............................................................................................................................................................................................................ACGTAACCACCACCATTACTGCTAC...................... 25 0 4 1.75 7 5 2 0 0 0
..............................................................................................................................................................GTGTCAAGCGTATAAAATAGATCATA................................................................... 26 0 4 1.75 7 4 3 0 0 0
....................TTTCCGTTTGTCGGATGCAGTTCTACAA........................................................................................................................................................................................................... 28 0 4 1.75 7 7 0 0 0 0
......................TCCGTTTGTCGGATGCAGTTCTACAACAC........................................................................................................................................................................................................ 29 0 4 1.75 7 7 0 0 0 0
.........................................................................................AATGTCCCTTCAACCTCCTTAAGGAG........................................................................................................................................ 26 0 4 1.75 7 7 0 0 0 0
.............................GTCGGATGCAGTTCTACAACACCCTGCT.................................................................................................................................................................................................. 28 0 4 1.75 7 5 2 0 0 0
............................................................................................GTCCCTTCAACCTCCTTAAGGAGTC...................................................................................................................................... 25 0 4 1.75 7 7 0 0 0 0
......................................................................................CCTAATGTCCCTTCAACCTCCTTAAG........................................................................................................................................... 26 0 3 1.67 5 5 0 0 0 0
............................................................................TGCTAGCTACCCTAATGTCCCTT........................................................................................................................................................ 23 0 3 1.67 5 4 1 0 0 0
............................................................................TGCTAGCTACCCTAATGTCCCTTCAA..................................................................................................................................................... 26 0 3 1.67 5 3 1 1 0 0
...............................................................................TAGCTACCCTAATGTCCCTTCAACCT.................................................................................................................................................. 26 0 3 1.67 5 3 2 0 0 0
......................................................................................................................................TGTTAGATTAACGAATGCCCTAAT............................................................................................. 24 0 3 1.67 5 1 2 2 0 0
......................................................................TCGCGTTGCTAGCTACCCTAATGTCCCT......................................................................................................................................................... 28 0 3 1.67 5 4 1 0 0 0
..............................................................................................................................................................................................GCTAAAATATCCTAACGTAACCACCAC.................................. 27 0 3 1.67 5 4 1 0 0 0
.........................................................ACTATCTATGCTGTCGCGTTGCTAGCT....................................................................................................................................................................... 27 0 5 1.60 8 8 0 0 0 0
..................................................................................................................................................................................................................................TACTTGGTAGCGGTCGTGT...... 19 3 20 1.60 32 24 7 0 1 0
....................................GCAGTTCTACAACACCCTGCTACTATCTA.......................................................................................................................................................................................... 29 0 5 1.60 8 8 0 0 0 0
..................................................................GCTGTCGCGTTGCTAGCTACCCTA................................................................................................................................................................. 24 0 5 1.60 8 8 0 0 0 0
.......................CCGTTTGTCGGATGCAGTTCTACAA........................................................................................................................................................................................................... 25 0 4 1.50 6 5 1 0 0 0
.............................................................................................................................................................TGTGTCAAGCGTATAAAATAGAT....................................................................... 23 0 4 1.50 6 5 1 0 0 0
.........................................................................................................................................................................................AGCATGCTAAAATATCCTAACGT........................................... 23 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................................................................AAAATAGATCATAAAGCATGCTAAAATAT................................................... 29 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................................................AATGTGTCAAGCGTATAAAATAGA........................................................................ 24 0 4 1.50 6 6 0 0 0 0
..................................................................................................................................AGCCTGTTAGATTAACGAATGCCCTAA.............................................................................................. 27 0 2 1.50 3 2 1 0 0 0
.................................................................TGCTGTCGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 27 0 4 1.50 6 3 1 2 0 0
............................TGTCGGATGCAGTTCTACAACACCC...................................................................................................................................................................................................... 25 0 4 1.50 6 4 2 0 0 0
.....................................................................GTCGCGTTGCTAGCTACCCTAA................................................................................................................................................................ 22 0 4 1.50 6 5 0 1 0 0
..........................................................................................................................TACCGTGAAGCCTGTTAGATTAACG........................................................................................................ 25 0 2 1.50 3 1 2 0 0 0
....................TTTCCGTTTGTCGGATGCAGTTC................................................................................................................................................................................................................ 23 0 4 1.50 6 6 0 0 0 0
............................................................................................................................................................................................................................TACTGCTACTTGGTAGCAGTAGTT....... 24 0 2 1.50 3 2 1 0 0 0
..............................................................................................................................................................................ATAGATCATAAAGCATGCTAAAATAT................................................... 26 0 2 1.50 3 3 0 0 0 0
..........................................................................................................................................................AAATGTGTCAAGCGTATAAAATAGAT....................................................................... 26 1 4 1.50 6 1 5 0 0 0
.......................................................................................................................................................................................AAAGCATGCTAAAATATCCTAACG............................................ 24 0 2 1.50 3 3 0 0 0 0
.GTTAGCTAACTACCCTTCTTTTCCGTTT.............................................................................................................................................................................................................................. 28 0 2 1.50 3 3 0 0 0 0
............................................ACAACACCCTGCTACTATCTATGC....................................................................................................................................................................................... 24 0 5 1.40 7 5 2 0 0 0
...................................................................CTGTCGCGTTGCTAGCTACCCT.................................................................................................................................................................. 22 0 5 1.40 7 7 0 0 0 0
...............................................ACACCCTGCTACTATCTATGCTGTCGC................................................................................................................................................................................. 27 0 5 1.40 7 5 2 0 0 0
.....................................................TGCTACTATCTATGCTGTCGCGTTGCT........................................................................................................................................................................... 27 0 5 1.40 7 5 2 0 0 0
.................................GATGCAGTTCTACAACACCCTGCTACTAT............................................................................................................................................................................................. 29 0 5 1.40 7 7 0 0 0 0
.................................GATGCAGTTCTACAACACCCTGCTACT............................................................................................................................................................................................... 27 0 5 1.40 7 4 3 0 0 0
.................................................ACCCTGCTACTATCTATGCTGTCGCGTT.............................................................................................................................................................................. 28 0 5 1.40 7 7 0 0 0 0
......................................................................................................................................................GCCCTAATGTGTCAAGCGTAT................................................................................ 21 0 3 1.33 4 3 1 0 0 0
..........................................................................GTTGCTAGCTACCCTAATGTCCCTTC....................................................................................................................................................... 26 0 3 1.33 4 3 0 1 0 0
...............................CGGATGCAGTTCTACAACACCCTGCTA................................................................................................................................................................................................. 27 0 6 1.33 8 8 0 0 0 0
......................................................................................................................................................GACCTAATGTGTCAAGCGTATAAAAT........................................................................... 26 1 3 1.33 4 0 4 0 0 0
.............................................................................GCTAGCTACCCTAATGTCCCTTCAACC................................................................................................................................................... 27 0 3 1.33 4 3 1 0 0 0
....................................................................................ACCCTAATGTCCCTTCAACCTCCTTAAG........................................................................................................................................... 28 0 3 1.33 4 4 0 0 0 0
..................................................................................CTACCCTAATGTCCCTTCAACCTCCT............................................................................................................................................... 26 0 3 1.33 4 4 0 0 0 0
.............................................................................GCTAGCTACCCTAATGTCCCTTCAAC.................................................................................................................................................... 26 0 3 1.33 4 3 1 0 0 0
.......................................................................CGCGTTGCTAGCTACCCTAATGTCC........................................................................................................................................................... 25 0 3 1.33 4 3 0 1 0 0
...................................................................................................................................................................AAGCGTATAAAATAGATCATAAAGCAT............................................................. 27 0 3 1.33 4 1 3 0 0 0
.................................................................................................................................................................................................................ACCACCACCATTACTGCTACTTGGT................. 25 0 3 1.33 4 3 1 0 0 0
..............................................................................................................................GTGAAGCCTGTTAGATTAACGAATGC................................................................................................... 26 0 3 1.33 4 1 3 0 0 0
..............................................................................................................................................................GTGTCAAGCGTATAAAATAGAT....................................................................... 22 0 4 1.25 5 2 3 0 0 0
...........................TTGTCGGATGCAGTTCTACAACACCC...................................................................................................................................................................................................... 26 0 4 1.25 5 5 0 0 0 0
.........................GTTTGTCGGATGCAGTTCTACAACAC........................................................................................................................................................................................................ 26 0 4 1.25 5 5 0 0 0 0
.....................TTCCGTTTGTCGGATGCAGTTCTAC............................................................................................................................................................................................................. 25 0 4 1.25 5 5 0 0 0 0
................................................................................................................................GAAGCCTGTTAGATTAACGAATGC................................................................................................... 24 0 4 1.25 5 4 1 0 0 0
.................................................................TGCTGTCGCGTTGCTAGCTACCCTAA................................................................................................................................................................ 26 0 4 1.25 5 5 0 0 0 0
................................................................ATGCTGTCGCGTTGCTAGCTACCCTAAT............................................................................................................................................................... 28 0 4 1.25 5 4 0 0 1 0
.........................................................................................................................................................................................................CTAACGTAACCACCACCATTACTGC......................... 25 0 4 1.25 5 5 0 0 0 0
.............................GTCGGATGCAGTTCTACAACACCC...................................................................................................................................................................................................... 24 0 4 1.25 5 4 1 0 0 0
......................TCCGTTTGTCGGATGCAGTTCTAC............................................................................................................................................................................................................. 24 0 4 1.25 5 4 1 0 0 0
.....................................................................GTCGCGTTGCTAGCTACCCTAATGTC............................................................................................................................................................ 26 0 4 1.25 5 4 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004521:8311460-8311710 - dwi_1326 CCA----ATCGATTGATGGGAAGA-------------AAAGGCAAACAGCCTACGTCAAGATGTTGTGGGAC------------------------------------GAT---GATAGATACGACAGCGCAACGATCGATGGGATTACAGGGAAGTTGGAGGAATTCCTCAGAAAGGATGGCACTTCGGACAATCTAATTGCTTACGGGATTACACAGTTCGCATATTTTATCTAGTATTTCGTACGATTTTATAGGATTGCATTGGTGGTGGTAATGACGATGAACCATCGTCATCAAAACGG------------------GC
droVir3 scaffold_12928:1076981-1077047 + CTC----GACAATCGATGAGG---------------------TGGCA------GAGCAGGAAATCGATAACG---------ATAACG---------------------------ATAACGATAGCGATAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC
droMoj3 scaffold_6496:11952223-11952336 + CCA----GCTGTTGGATGTAACCAATACGCTAACCATTGAGGAGCT---------GCGCGACTTTGAAATGC----------------------------G---------GTA-AGTC--TCTGTGAATGCAAAAG--------------------CTGAAATCGCCTTCCAGTGAGGATGGCATT------------------------------------------------------------------------------------------------------------------------------------------T
droGri2 scaffold_14853:6837963-6838038 + CAA----AACGGGCGATGATG------------ATGACGAGGAGGAGGATGATGATC-AGTTGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----ATGGACGATGGCGGTGGCGGCAGC
dp5 XR_group6:8282169-8282277 + TTG----CATAGCTTATGGGAAAG---------ACATTCCACAAACAGAACAAGGACCCACA--------------CAGCA----------AAATGC---A---------GGGGAGCCCTCACGGAAGGATGCAGG--------------------------------------------------------------------------------------------------------------------------TTA-C--------------------------------------------AATGCCGCGAGCGATGGG
droPer2 scaffold_26:281115-281166 + TTA----GTATA------------------------TTTAGTA---------TATTTAGTATTTTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTCTTGGATTGCATC----------------------------------------------------------G
droAna3 scaffold_13337:7191468-7191503 - GCA----ACCACAGAGCG------------------CTACAAAAAAGAAAATAAT------------------------------------------------------------------------------TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394336:4952-4981 - TTA----TTTATTA-------------------------------------TTTCGTACGATTCTATAAA-----------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302235:123728-123801 - CAT----ACCGG-----------------CCGCACATTGAGGAAAAGAAACTGACCCGAGATGCCATGGAGA------------------------------------------AGTACATGCGGGAGCGCAACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droFic1 scf7180000453316:88408-88480 + CTT----ATCGG-----------------CCTCACATCGAGGAAAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AATACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491044:208303-208414 + AATCGTCATGGG-----------------AAGCACATCAAACGCAAGAAGCTAGAATGCAATCAAGTGGAACTGGACAACGATGATGCCTGCAGTGA---G---------GATGAGTTTATCCGAAAGATTGCCAG--------------------------------------------------------------------------------------------------------------------------TTC--------------------------------------------------------------GG
droRho1 scf7180000769355:175349-175425 - TGT----TTTTT-----------------TTTGCTATTTGTTCGATGTTGTTTGATTGGATTAAAA-------------------------------------------------------GTGCGGATTTCGGT-----------------------------------------------------------------------------------------------------------------------------------------------------AAACCATCGTCG-----ACGG------------------GC
droBia1 scf7180000302261:1560944-1561016 - CCT----ACCGG-----------------CCGCACATCGAGGAGAAGAAGCTGACGCGCGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415367:528346-528431 - TCC----CCTAGAGGAACTAA------------------------------------------------------ACAGCAGCAGGGCCAGTAGATATGCCATAGTCCCAG--------GACAGGCAGCCCAGAGATTGGCCAG------------------------------------------------------------------------------------------------------------------ATCG-----------------------------------------------------------CAGG
droEug1 scf7180000409452:1600985-1601057 + CTT----ATCGG-----------------CCGCACATCGAGGAAAAGAAACTCACCCGCGATGCTATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:15040220-15040292 + CTT----ACCGG-----------------CCACACATCGAGGAGAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:14592068-14592140 + CTT----ACCGG-----------------CCGCACATCGAGGAGAAGAAGCTGACGCGGGACGCCATGGAGA------------------------------------------AGTATATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_3:1302355-1302427 + CTT----ACCGG-----------------CCGCACATCGAGGAGAAGAAGCTGACGCGGGACGCCATGGAGA------------------------------------------AGTATATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:20307981-20308053 - CTT----ATCGG-----------------CCACACATCGAGGAGAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:6779959-6780031 + CTT----ATCGG-----------------CCACACATCGAGGAGAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CCA----ATCGATTGATGGGAAGA-------------AAAGGCAAACAGCCTACGTCAAGATGTTGTGGGAC------------------------------------GAT---GATAGATACGACAGCGCAACGATCGATGGGATTACAGGGAAGTTGGAGGAATTCCTCAGAAAGGATGGCACTTCGGACAATCTAATTGCTTACGGGATTACACAGTTCGCATATTTTATCTAGTATTTCGTACGATTTTATAGGATTGCATTGGTGGTGGTAATGACGATGAACCATCGTCATCAAAACGG------------------GCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..A----ATCGATTGATGGGAAGA-------------AAAGG...........................................................................................................................................................................................................................................................................................23214.0028015580
.............................................................................................................AT---GATAGATACGACAGCGCAACGA.............................................................................................................................................................................................24512.6063053550
..A----ATCGATTGATGGGAAGA-------------AAAGGC..........................................................................................................................................................................................................................................................................................2428.501708342
.............................................................................................................AT---GATAGATACGACAGCGCAACG..............................................................................................................................................................................................2354.4022010390
............................................................................................................................................TGGGATTACAGGGAAGTTGGAGG..................................................................................................................................................................2334.3313011110
..A----ATCGATTGATGGGAAGA-------------AAAG............................................................................................................................................................................................................................................................................................2223.50700250
...................................................................................................................ATAGATACGACAGCGCAACGATCG..........................................................................................................................................................................................2453.0015110040
....................................................................................................................................................................................................TAATTGCTTACGGGATTACACAGT.........................................................................................................2432.67800080
...................................................................................................................ATAGATACGACAGCGCAACGAT............................................................................................................................................................................................2252.401204080
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGT...............................2432.33707000
..................................................................................................................................................TACAGGGAAGTTGGAGGAATTCCTC..........................................................................................................................................................2542.25900090
.............................................................................................................AT---GATAGATACGACAGCGCAAC...............................................................................................................................................................................................2252.201106230
..................................................................................................................................................................................................................................ATTTTATCTAGTATTTCGTACGAT...........................................................................2422.00404000
.............................................................................................................AT---GATAGATACGACAGCGCAACGAT............................................................................................................................................................................................2551.60805030
..................................................................................................................................................................................................................................ATTTTATCTAGTATTTCGTACGATT..........................................................................2521.50303000
.....................................................................GAC------------------------------------GAT---GATAGATACGACAGCGC..................................................................................................................................................................................................2351.40707000
.............................................................................................................AT---GATAGATACGACAGCGCAACGATCGA.........................................................................................................................................................................................2851.40706100
....................................................................................................................................................................................................................................................TACGATTTTATAGGATTGCATTGG.........................................................2431.33404000
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTC..............................2531.33404000
............................................................................................................................................TGGGATTACAGGGAAGTTGGAGGAA................................................................................................................................................................2531.33404000
.........................................................................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGGTGG...................................................2541.25504010
...................................................................................................................ATAGATACGACAGCGCAACGATC...........................................................................................................................................................................................2351.20615000
..................................................................................................................................................................................................................................ATTTTATCTAGTATTTCGTACGA............................................................................2321.00202000
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCG................................2331.00303000
..A----ATCGATTGATGGGAAGA-------------AAAGGCAA........................................................................................................................................................................................................................................................................................2621.00201010
..............GATGGGAAGA-------------AAAGGCAAACAGCCT.................................................................................................................................................................................................................................................................................2511.00100010
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTCA.............................2631.00302010
.........................................................................................................................................................................TCAGAAAGGATGGCACTTCGGA......................................................................................................................................2211.00101000
.................................................................................................................................................................................................................................................................................GTAATGACGATGAACCATCGT...............................2131.00300030
..........................................................................................................................................................AGTTGGAGGAATTCCTCAGAAAGG...................................................................................................................................................2411.00101000
..........GATTGATGGGAAGA-------------AAAG............................................................................................................................................................................................................................................................................................1821.00200020
.............................................................................................................AT---GATAGATACGACAGCGCA.................................................................................................................................................................................................2051.00504100
..................................................................................................................................................................................................................................ATTTTATCTAGTATTTCGTACGATTT.........................................................................2621.00202000
...................................................................................................................ATAGATACGACAGCGCAACGATCGAT........................................................................................................................................................................................2651.00501040
............................................................................................................................................TGGGATTACAGGGAAGTTGG.....................................................................................................................................................................2031.00302010
.........................................................................................................................................................................TCAGAAAGGATGGCACTTCGGACAATC.................................................................................................................................2711.00101000
...........ATTGATGGGAAGA-------------AAAGGCAAACA.....................................................................................................................................................................................................................................................................................2411.00101000
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAAT...............................................2441.00403010
.............................................................................................................AT---GATAGATACGACAGCGCAACGATCG..........................................................................................................................................................................................2751.00504010
...................................................................................................................ATAGATACGACAGCGCAACGATCGA.........................................................................................................................................................................................2550.80401030
..........................................................................................................................CGACAGCGCAACGATCGATGGGAT...................................................................................................................................................................................2450.80404000
..................................................................................................................................................TACAGGGAAGTTGGAGGAATTCCTCAGA.......................................................................................................................................................2840.75301020
.................................................................................................................................................TTACAGGGAAGTTGGAGGAATTCCT...........................................................................................................................................................2540.75300030
.........................................................................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGG......................................................2240.75303000
........................................................................................................................................TCGATGGGATTACAGGGAAGT........................................................................................................................................................................2130.67200020
................................................GCCTACGTCAAGATGTTGTGG................................................................................................................................................................................................................................................................2160.67404000
....................................................................................................................................................................................................TAATTGCTTACGGGATTACACAGTTCGCA....................................................................................................2930.67202000
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCA...................................2030.67202000
.........................................................................................................................................................................................................GCTTACGGGATTACACAGTTCGCA....................................................................................................2430.67202000
..............................................................................................................................................................................................................................GCATATTTTATCTAGTATTTCGTA...............................................................................2430.67202000
............................................................................................................................................TGGGATTACAGGGAAGTTGGAGGAAT...............................................................................................................................................................2630.67202000
.....................................................................GAC------------------------------------GAT---GATAGATACGACAGCG...................................................................................................................................................................................................2250.60302010
.............................................................................................................AT---GATAGATACGACAGCGC..................................................................................................................................................................................................1950.60303000
...................................................................................................................ATAGATACGACAGCGCAACG..............................................................................................................................................................................................2050.60303000
.....................................................................GAC------------------------------------GAT---GATAGATACGACAGCGCA.................................................................................................................................................................................................2450.60303000
..................................................................................................................GATAGATACGACAGCGCAACGA.............................................................................................................................................................................................2250.60301020
...................................................TACGTCAAGATGTTGTGG................................................................................................................................................................................................................................................................1870.57403010
.CA----ATCGATTGATGGGAAGA-------------AAAGG...........................................................................................................................................................................................................................................................................................2420.50101000
..................................................................................................................................................TACAGGGAAGTTGGAGGAATTCCT...........................................................................................................................................................2440.50202000
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAATG..............................................2540.50201100
...........ATTGATGGGAAGA-------------AAAGGCAAAC......................................................................................................................................................................................................................................................................................2320.50101000
..A----ATCGATTGATGGGAAGA-------------AAAGGCA.........................................................................................................................................................................................................................................................................................2520.50101000
............................................................................................................................................................................................................................................GTATTTCGTACGATTTTATAGGAT.................................................................2420.50101000
...................................................TACGTCAAGATGTTGTGGGAC------------------------------------GA.......................................................................................................................................................................................................................2360.50302010
............................................................................................................................................................................................GGACAATCTAATTGCTTACGGGAT.................................................................................................................2420.50101000
............................................................................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGGTA.................................................2440.50200020
.................................................................................................................................................TTACAGGGAAGTTGGAGGAATTC.............................................................................................................................................................2340.50200110
.....................................................................................................................................................................................................................................TTATCTAGTATTTCGTACGATT..........................................................................2220.50101000
..............................................................................................................................................................................................................................GCATATTTTATCTAGTATTTCGTACGA............................................................................2720.50101000
..A----ATCGATTGATGGGAAGA-------------AAAGGA..........................................................................................................................................................................................................................................................................................2420.50101000
..A----ATCGATTGATGGGAAGA-------------AAAGGCAAAC......................................................................................................................................................................................................................................................................................2820.50100100
..............................................................................................................................................................................................................................................ATTTCGTACGATTTTATAGGATTGC..............................................................2520.50100010
.CA----ATCGATTGATGGGAAGA-------------AAAG............................................................................................................................................................................................................................................................................................2320.50101000
......................................AAGGCAAACAGCCTACGTCAAGATGTTG...................................................................................................................................................................................................................................................................2840.50200020
..............................................................................................................................................................................................................................GCATATTTTATCTAGTATTTCGTACGAT...........................................................................2820.50101000
.........................................................................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGGTG....................................................2440.50202000
............................................................................................................................................................................................GGACAATCTAATTGCTTACGGGATTAC..............................................................................................................2720.50101000
.................................................................................................................................................TTACAGGGAAGTTGGAGGAATTCCTC..........................................................................................................................................................2640.50200020
............................................................................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGG...................................................2240.50200020
.....................................................................................................................................................................................................................................TTATCTAGTATTTCGTACGATTTTA.......................................................................2520.50101000
............................................................................................................................................................................................................................................GTATTTCGTACGATTTTATAGGA..................................................................2320.50101000
...........ATTGATGGGAAGA-------------AAAGGCAAA.......................................................................................................................................................................................................................................................................................2220.50101000
............................................................................................................................................................................................GGACAATCTAATTGCTTACGGGA..................................................................................................................2320.50101000
............................................................................................................................................................................................................................................GTATTTCGTACGATTTTATAGGATTGCA.............................................................2820.50101000
.........................................................................................................................................................................................................................................................TTTTATAGGATTGCATTGGTGGT.....................................................2340.50202000
...........ATTGATGGGAAGA-------------AAAGGCAA........................................................................................................................................................................................................................................................................................2120.50101000
...........ATTGATGGGAAGA-------------AAAGGCAAT.......................................................................................................................................................................................................................................................................................2220.50100010
..............................................CAGCCTACGTCAAGATGTTGT..................................................................................................................................................................................................................................................................2140.50200020
.......................................................TCAAGATGTTGTGGGAC------------------------------------GAT---GATAGA.............................................................................................................................................................................................................2650.40201010
.............................................................TGTTGTGGGAC------------------------------------GAT---GATAGAT............................................................................................................................................................................................................2150.40201100
...................................................TACGTCAAGATGTTGTGGGAC------------------------------------GAT---G..................................................................................................................................................................................................................2550.40202000
..........................................................................................................................CGACAGCGCAACGATCGATGGG.....................................................................................................................................................................................2250.40201010
..............................................................................................................T---GATAGATACGACAGCGCAACGA.............................................................................................................................................................................................2350.40202000
..........................................................................................................................CGACAGCGCAACGATCGATGGGA....................................................................................................................................................................................2350.40201010
.......................................................TCAAGATGTTGTGGGAC------------------------------------GAT---GATA...............................................................................................................................................................................................................2450.40201010
........................................................................................................................TACGACAGCGCAACGATCGATGGGA....................................................................................................................................................................................2550.40200011
.....................................................................................................................AGATACGACAGCGCAACGATCGA.........................................................................................................................................................................................2350.40202000
...................................................................................................................ATAGATACGACAGCGCAACGA.............................................................................................................................................................................................2150.40201010
.....................................................................................................................AGATACGACAGCGCAACGATCG..........................................................................................................................................................................................2250.40202000
...................................................TACGTCAAGATGTTGTGGGAC------------------------------------GAT---GA.................................................................................................................................................................................................................2650.40200020
........................................................................................................................TACGACAGCGCAACGATCGATGGG.....................................................................................................................................................................................2450.40201010
..................................................................................................................................................................................................TCTAATTGCTTACGGGATTACACAGT.........................................................................................................2630.33100010
..........................................................................................................................................................................................................................................................................GGTGGTGGTAATGACGATGAAC.....................................2230.33101000
..........................................................................................................................CGACAGCGCAACGATCGATGG......................................................................................................................................................................................2160.33202000
.................................................................................................................................................................................................ATCTAATTGCTTACGGGATTAC..............................................................................................................2230.33101000
..................................................................................................................................CAACGATCGATGGGATTACAGGGA...........................................................................................................................................................................2430.33101000
................................................................................................................................................................................................AATCTAATTGCTTACGGGATT................................................................................................................2130.33100010
.........................................................................................................................................................................................................GCTTACGGGATTACACAGTTCG......................................................................................................2230.33101000
.............................................................................................................................................GGGATTACAGGGAAGTTGGAGGA.................................................................................................................................................................2330.33101000
........................................................................................................................................................................................................................................................................TTGGTGGTGGTAATGACGATGAAC.....................................2430.33101000
...................................................................................................................................................................................................CTAATTGCTTACGGGATTACACAGT.........................................................................................................2530.33100010
.........................................................................................................................................................................................................GCTTACGGGATTACACAGT.........................................................................................................1930.33100010
....................................................................................................................................................................................................................................................TACGATTTTATAGGATTGCATTGGTGG......................................................2730.33101000
............................................................................................................................................TGGGATTACAGGGAAGTTGGA....................................................................................................................................................................2130.33100010
.......................................................................................................................................ATCGATGGGATTACAGGGAAGTTGG.....................................................................................................................................................................2530.33101000
............................................................................................................................................TGGGATTACAGGGAAGTTGGAG...................................................................................................................................................................2230.33101000
......................................................................................................................................................................................................ATTGCTTACGGGATTACACAG..........................................................................................................2130.33101000
...................................................TACGTCAAGATGTTGTGGGAC------------------------------------.........................................................................................................................................................................................................................2160.33202000
.....................................................................................................................................CGATCGATGGGATTACAGGGAAGT........................................................................................................................................................................2430.33101000
..................................................................................................................................................................................................................................ATTTTATCTAGTATTTCGTACG.............................................................................2230.33101000
................................................GCCTACGTCAAGATGTTGTGGGAC------------------------------------GA.......................................................................................................................................................................................................................2660.33201010
....................................................................................................................................................................................................TAATTGCTTACGGGATTACACAGTTCG......................................................................................................2730.33101000
...............................................................................................................................................................................................................................................................................TGGTAATGACGATGAACCATCGT...............................2330.33101000
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTCAA............................2730.33101000
..................................................CTACGTCAAGATGTTGTGGGA..............................................................................................................................................................................................................................................................2160.33200200
...........................................................................................................................................ATGGGATTACAGGGAAGTTGG.....................................................................................................................................................................2130.33100010
..........................................................................................................................................GATGGGATTACAGGGAAGTTGGA....................................................................................................................................................................2330.33101000
.........................................................................................................................................................................................................................................................................TGGTGGTGGTAATGACGATGAACCATCG................................2830.33101000
...................................................TACGTCAAGATGTTGTGGGAC------------------------------------G........................................................................................................................................................................................................................2260.33202000
....................................................................................................................................................................................................................................................TACGATTTTATAGGATTGCATTGGTG.......................................................2630.33101000
..............................................................................................................................................................................................................................GCATATTTTATCTAGTATTTCGTAC..............................................................................2530.33101000
..............................................................................................................................................................................................................................................................................GTGGTAATGACGATGAACCATCGTCAT............................2730.33101000
............................................................................................................................................TGGGATTACAGGGAAGTTGGAGGATA...............................................................................................................................................................2630.33101000
..........................................................................................................................................................................................................................................................................GGTGGTGGTAATGACGATGAACC....................................2330.33101000
.........................................................................................................................................................................................................GCTTACGGGATTACACAGTTCGC.....................................................................................................2330.33101000
...............................................................................................................................................................................................................................................................................TGGTAATGACGATGAACCATCG................................2230.33101000
..........................................................................................................................................GATGGGATTACAGGGAAGTTG......................................................................................................................................................................2130.33101000
..............................................................................................................................................................................................................................GCATATTTTATCTAGTATTTCGT................................................................................2330.33101000
............................................................................................................................................TGGGATTACAGGGAAGTTGGAGGA.................................................................................................................................................................2430.33101000
...................................................TACGTCAAGATGTTGTGGGA..............................................................................................................................................................................................................................................................2070.29201010
...................................................TACGTCAAGATGTTGTGGG...............................................................................................................................................................................................................................................................1970.29202000
..........................................................................................................................................................................................................................................................TTTATAGGATTGCATTGGTGGT.....................................................2240.25101000
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAATGA.............................................2640.25101000
.......................................................................................................................................................................................................................................................................ATTGGTGGTGGTAATGACGAT.........................................2140.25100010
..................................................................................................................................................TACAGGGAAGTTGGAGGAATTCA............................................................................................................................................................2340.25101000
............................................................................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGGTAA................................................2540.25100010
....................................................................................................................................................................................................................................................................TGCATTGGTGGTGGTAATGACGA..........................................2340.25101000
.................................................................................................................................................TTACAGGGAAGTTGGAGGAATT..............................................................................................................................................................2240.25101000
...................................................................................................................................................................................................................TTACACAGTTCGCATATTTTA.............................................................................................2140.25101000
.........................................................................................................................................................................................................................................................................TGGTGGTGGTAATGACGATGA.......................................2140.25101000
.......................................................................................................................................................................................ACTTCGGACAATCTAATTGCTTAAA.....................................................................................................................2540.25101000
.............................................................................................................................................................................................................................................................ATAGGATTGCATTGGTGGT.....................................................1940.25101000
.......................................AGGCAAACAGCCTACGTCAAGA........................................................................................................................................................................................................................................................................2240.25101000
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGG...................................................2040.25101000
...............................................................................................................................................................................................................GGGATTACACAGTTCGCATATTT...............................................................................................2340.25101000
................................................................................................................................................ATTACAGGGAAGTTGGAGGAATTCCTC..........................................................................................................................................................2740.25101000
............................................AACAGCCTACGTCAAGATGTTGTGGG...............................................................................................................................................................................................................................................................2640.25101000
...........................................................................................................................................................................................................................................................TTATAGGATTGCATTGGTGGTGG...................................................2340.25100010
.......................................................................................................................................................................................ACTTCGGACAATCTAATTGCTTACG.....................................................................................................................2540.25101000
...................................................................................................................................................ACAGGGAAGTTGGAGGAATTCCTC..........................................................................................................................................................2440.25101000
.......................................................................................................................................................................................ACTTCGGACAATCTAATTGCTTAT......................................................................................................................2440.25100010
..................................................................................................................................................TACAGGGAAGTTGGAGGAATTCCTCTA........................................................................................................................................................2740.25100100
.......................................................................................................................................................................................ACTTCGGACAATCTAATTGCTT........................................................................................................................2240.25101000
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGT..................................................2140.25100010
......................................AAGGCAAACAGCCTACGTCAAGATG......................................................................................................................................................................................................................................................................2540.25100010
.................................................................................................................................................TTACAGGGAAGTTGGAGGAATTCC............................................................................................................................................................2440.25101000
.........................................................................................................................................................................................................................................................TTTTATAGGATTGCATTGGTG.......................................................2140.25100010
........................................................................................................................................................................................CTTCGGACAATCTAATTGCTTACG.....................................................................................................................2440.25101000
............................................................................................................................................................................................................................................................TATAGGATTGCATTGGTGGTGGTAAT...............................................2640.25100010
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTAA................................................2340.25101000
.......................................................................................................................................................................................................................ACAGTTCGCATATTTTATCTAGTATT....................................................................................2640.25101000
................................................................................................................................................ATTACAGGGAAGTTGGAGGAATT..............................................................................................................................................................2340.25101000
........................................GGCAAACAGCCTACGTCAAGATGTTG...................................................................................................................................................................................................................................................................2640.25100010
..................................................................................................................................................................................................................................................................ATTGCATTGGTGGTGGTAATGACG...........................................2440.25101000
................................................................................................................................................................................................................GGATTACACAGTTCGCATATTTTATC...........................................................................................2640.25101000
..............................................................................................................................................................................................................................................................TAGGATTGCATTGGTGGTGGTA.................................................2240.25100010
...........................................................................................................................................................................................................................................................TTATAGGATTGCATTGGTGG......................................................2040.25100010
.........................................................................................................................ACGACAGCGCAACGATCGATGGGAT...................................................................................................................................................................................2550.20101000
..................................................................................................................GATAGATACGACAGCGCAACGATCGAT........................................................................................................................................................................................2750.20101000
................................................................................................................................................................................................................................................................GGATTGCATTGGTGGTGGTA.................................................2050.20101000
.....................................................................GAC------------------------------------GAT---GATAGATACGACAGCGCAACG..............................................................................................................................................................................................2750.20101000
....................................................................................................................TAGATACGACAGCGCAACGAT............................................................................................................................................................................................2150.20101000
.......................................................TCAAGATGTTGTGGGAC------------------------------------GAT---GATAG..............................................................................................................................................................................................................2550.20100010
..................................................................................................................................................................................................................................................................ATTGCATTGGTGGTGGTAATG..............................................2150.20100010
................................................................TGTGGGAC------------------------------------GAT---GATAGATACGAC.......................................................................................................................................................................................................2350.20101000
.......................................................................C------------------------------------GAT---GATAGATACGACAGCGCAACGA.............................................................................................................................................................................................2650.20100010
................................................................TGTGGGAC------------------------------------GAT---GATAGATACGA........................................................................................................................................................................................................2250.20100010
..................................................................................................................GATAGATACGACAGCGCAACGAT............................................................................................................................................................................................2350.20101000
........................................................................................................................TACGACAGCGCAACGATCGATGGGAT...................................................................................................................................................................................2650.20101000
....................................................................................................................TAGATACGACAGCGCAACGATCGATG.......................................................................................................................................................................................2650.20100010
..................................................................................................................GATAGATACGACAGCGCAACGATCG..........................................................................................................................................................................................2550.20101000
.............................................................................................................AT---GATAGATACGACAGCG...................................................................................................................................................................................................1850.20101000
...................................................................................................................ATAGATACGACAGCGCAACGATCGATGG......................................................................................................................................................................................2850.20101000
.............................................................................................................AT---GATAGATACGACAGCGCAACGATAT..........................................................................................................................................................................................2750.20100010
....................................................................................................................TAGATACGACAGCGCAACGATCGA.........................................................................................................................................................................................2450.20101000
...................................................................................................................................................................................................................................................................TTGCATTGGTGGTGGTAATGA.............................................2150.20100010
................................................................TGTGGGAC------------------------------------GAT---GATAGATACGACAG.....................................................................................................................................................................................................2550.20100010
...............................................................................................................................................................................................................................................................AGGATTGCATTGGTGGTGGTAA................................................2250.20101000
...........................................................................................................................GACAGCGCAACGATCGATGGGA....................................................................................................................................................................................2250.20100010
...................................................................................................................ATAGATACGACAGCGCAACGAAA...........................................................................................................................................................................................2350.20100010
.............................................................................................................AT---GATAGATACGACAGCGCAACT..............................................................................................................................................................................................2350.20101000
...................................................................................................................ATAGATACGACAGCGCAAC...............................................................................................................................................................................................1950.20100010
....................................................................................................................TAGATACGACAGCGCAACGATCG..........................................................................................................................................................................................2350.20100010
..............................................................................................................T---GATAGATACGACAGCGCAAC...............................................................................................................................................................................................2150.20101000
.............................................................................................................AT---GATAGATACGACAGCGCAACGAAAA..........................................................................................................................................................................................2750.20101000
..................................................................................................................GATAGATACGACAGCGCAA................................................................................................................................................................................................1950.20101000
.............................................................................................................AT---GATAGATACGACAGCGCAACGATA...........................................................................................................................................................................................2650.20100100
.............................................................................................................AT---GATAGATACGACAGCGCAACGATC...........................................................................................................................................................................................2650.20100100
.............................................................................................................AT---GATAGATACGACAGCGCAA................................................................................................................................................................................................2150.20101000
.................................................................................................................................................................................................................................................................GATTGCATTGGTGGTGGTAATGAC............................................2450.20101000
.................................................................................................................................................................................................................................................................GATTGCATTGGTGGTGGTAAT...............................................2150.20100010
..............................................................................................................T---GATAGATACGACAGCGCAACGAT............................................................................................................................................................................................2450.20100010
..............................................................................................................T---GATAGATACGACAGCGC..................................................................................................................................................................................................1850.20101000
..............................................................................................................T---GATAGATACGACAGCGCAACGAA............................................................................................................................................................................................2450.20101000
.......................................................TCAAGATGTTGTGGGAC------------------------------------GAT---G..................................................................................................................................................................................................................2160.17100010
..........................................................................................................................CGACAGCGCAACGATCGATG.......................................................................................................................................................................................2060.17101000
..................................................CTACGTCAAGATGTTGTGGGAC------------------------------------G........................................................................................................................................................................................................................2360.17101000
................................................GCCTACGTCAAGATGTTGTGGGAC------------------------------------G........................................................................................................................................................................................................................2560.17101000
................................................GCCTACGTCAAGATGTTGTGGGA..............................................................................................................................................................................................................................................................2360.17101000
.....................................................CGTCAAGATGTTGTGGGAC------------------------------------GA.......................................................................................................................................................................................................................2160.17101000
....................................................ACGTCAAGATGTTGTGGGAC------------------------------------G........................................................................................................................................................................................................................2160.17100010
.......................................................TCAAGATGTTGTGGGAC------------------------------------GAT---GA.................................................................................................................................................................................................................2260.17101000
.....................................................................GAC------------------------------------GAT---GATAGATACGAA.......................................................................................................................................................................................................1860.17101000
........................................................................................................................TACGACAGCGCAACGATCGATGG......................................................................................................................................................................................2360.17101000
droVir3
CTC----GACAATCGATGAGG---------------------TGGCA------GAGCAGGAAATCGATAACG---------ATAACG---------------------------ATAACGATAGCGATAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................GATAACG---------ATAACG---------------------------ATAACGAT...........................................................................................................................................................................................................21200.102000000001000000000000000000000000000000000000000000000000000001
droMoj3
CCA----GCTGTTGGATGTAACCAATACGCTAACCATTGAGGAGCT---------GCGCGACTTTGAAATGC----------------------------G---------GTA-AGTC--TCTGTGAATGCAAAAG--------------------CTGAAATCGCCTTCCAGTGAGGATGGCATT------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAA----AACGGGCGATGATG------------ATGACGAGGAGGAGGATGATGATC-AGTTGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----ATGGACGATGGCGGTGGCGGCAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................ATG------------ATGACGAGGAGGAGGATGATGATC-...........................................................................................................................................................................................................................................................................2711.00101
.................................................................GCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----ATGGACGATGGCGGTG........2011.00110
....................G------------ATGACGAGGAGGAGGATG..................................................................................................................................................................................................................................................................................1911.00110
dp5
TTG----CATAGCTTATGGGAAAG---------ACATTCCACAAACAGAACAAGGACCCACA--------------CAGCA----------AAATGC---A---------GGGGAGCCCTCACGGAAGGATGCAGG--------------------------------------------------------------------------------------------------------------------------TTA-C--------------------------------------------AATGCCGCGAGCGATGGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTA----GTATA------------------------TTTAGTA---------TATTTAGTATTTTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTCTTGGATTGCATC----------------------------------------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................TTTTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTCTTGGATTG...............................................................2321.002200000
........................................................TAGTATTTTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTCTTGGAT.................................................................2640.251010000
................................................................TACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTCTTGGAT.................................................................1850.201100000
droAna3
GCA----ACCACAGAGCG------------------CTACAAAAAAGAAAATAAT------------------------------------------------------------------------------TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTA----TTTATTA-------------------------------------TTTCGTACGATTCTATAAA-----------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAT----ACCGG-----------------CCGCACATTGAGGAAAAGAAACTGACCCGAGATGCCATGGAGA------------------------------------------AGTACATGCGGGAGCGCAACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droFic1
CTT----ATCGG-----------------CCTCACATCGAGGAAAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AATACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AATCGTCATGGG-----------------AAGCACATCAAACGCAAGAAGCTAGAATGCAATCAAGTGGAACTGGACAACGATGATGCCTGCAGTGA---G---------GATGAGTTTATCCGAAAGATTGCCAG--------------------------------------------------------------------------------------------------------------------------TTC--------------------------------------------------------------GGSizeHit CountTotal NormTotal
No Reads
droRho1
TGT----TTTTT-----------------TTTGCTATTTGTTCGATGTTGTTTGATTGGATTAAAA-------------------------------------------------------GTGCGGATTTCGGT-----------------------------------------------------------------------------------------------------------------------------------------------------AAACCATCGTCG-----ACGG------------------GCSizeHit CountTotal NormTotal
No Reads
droBia1
CCT----ACCGG-----------------CCGCACATCGAGGAGAAGAAGCTGACGCGCGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCC----CCTAGAGGAACTAA------------------------------------------------------ACAGCAGCAGGGCCAGTAGATATGCCATAGTCCCAG--------GACAGGCAGCCCAGAGATTGGCCAG------------------------------------------------------------------------------------------------------------------ATCG-----------------------------------------------------------CAGGSizeHit CountTotal NormTotal
No Reads
droEug1
CTT----ATCGG-----------------CCGCACATCGAGGAAAAGAAACTCACCCGCGATGCTATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTT----ACCGG-----------------CCACACATCGAGGAGAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................CTCACGCGGGACGCCATGGAGA------------------------------------------AGTAC..............................................................................................................................................................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GAAGCTCACGCGGGACGCCATGGAGA------------------------------------------A..................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..T----ACCGG-----------------CCACACATCGAGGAGAAGAA....................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TT----ACCGG-----------------CCACACATCGAGGAGAAGA.....................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCGGGACGCCATGGAGA------------------------------------------AGT................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CACACATCGAGGAGAAGAA....................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AAGAAGCTCACGCGGGACGCCATGGAG..............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........GG-----------------CCACACATCGAGGAGAAGAAGCT.................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CACGCGGGACGCCATGGAGA------------------------------------------AGTAC..............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................CTCACGCGGGACGCCATGGAG..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAGGAGAAGAAGCTCACGCGGGACG......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CACATCGAGGAGAAGAAGCTCACGCGGGAC.......................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGAAGCTCACGCGGGACGCCAT..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TCACGCGGGACGCCATGGAGA------------------------------------------AGT................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CACGCGGGACGCCATGGAGA------------------------------------------AGTACAT............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...................................................TCACGCGGGACGCCATGGAGA------------------------------------------AGTAC..............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GAAGAAGCTCACGCGGGACGCCA...................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGGAGA------------------------------------------AGTACATGCGCGAGCG...................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................AGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------A..................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGGAGA------------------------------------------AGTACATGCGCG.......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................GAGAAGAAGCTCACGCGGGACGCCA...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................CATGGAGA------------------------------------------AGTACATGCGCG.......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GACGCCATGGAGA------------------------------------------AGTACATGC..........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................GCTCACGCGGGACGCCATGGAGA------------------------------------------AGT................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................CACACATCGAGGAGAAGAAGCTCACG.............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................CCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAA................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTT----ACCGG-----------------CCGCACATCGAGGAGAAGAAGCTGACGCGGGACGCCATGGAGA------------------------------------------AGTATATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................GCACATCGAGGAGAAGAA....................................................................................................................................................................................................................................................................................1811.00100000001000000000
....................................TCGAGGAGAAGAAGCTGACGCGGGA........................................................................................................................................................................................................................................................................2511.00100000000000010000
...............................................AAGCTGACGCGGGCT.......................................................................................................................................................................................................................................................................15200.15300000000300000000
droSec2
CTT----ACCGG-----------------CCGCACATCGAGGAGAAGAAGCTGACGCGGGACGCCATGGAGA------------------------------------------AGTATATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTT----ATCGG-----------------CCACACATCGAGGAGAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CTT----ATCGG-----------------CCACACATCGAGGAGAAGAAGCTCACGCGGGACGCCATGGAGA------------------------------------------AGTACATGCGCGAGCGCAACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................GAGGAGAAGAAGCTCACGCGGGACGC.....................................................................................................................................................................................................................................................................2611.0011000000

Generated: 05/18/2015 at 01:17 AM