ID:

dwi_1213

 Coordinate:

scf2_1100000004521:2156625-2156775 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.4 -10.0 -9.6

Flybase annnotation

exon [dwil_GLEANR_15414:7]; CDS [Dwil\GK15141-cds]; intron [Dwil\GK15141-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACATCTCCTTTTGAGTGTGAATCCGATGAAAAGGAAGAATACGGAAAGGGTGTTATTTTTTATCTCAAAAATGATAAAATCGTTGGCATTCTGCTATGGAATCTATTCAATCGAATAGGCCTGGCCAGGACAATAATTAATCAAAATAAGAAATATGATGACCTCAATGAGGTGGCTAAACTTTTCGAGATTCATTCGTAGAATTTGCTAACTGAGACAGAAAATGCGACAACCTTGTATATAAACTAGA
**************************************************************************...................((((.((..(((((((....)))))))))))))***************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 M020
head
 V119
head
.........................................................................................................ATTCAATCGAATAGGCCTGGC............................................................................................................................. 21 0 1 5.00 5 4 0 0 0 1
..........................................................................ATAAAATCGTTGGCATTCTGC............................................................................................................................................................ 21 0 1 2.00 2 1 0 0 1 0
................................................................CTCAAAAATGATAAAATCGTTGGC................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................ATTTGCTAACTGAGACAG.............................. 18 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................ATAAGAAATATGATGACCTCAATGAGGT............................................................................. 28 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................AATGAGGTGGCTAAACTTTTCGAG............................................................. 24 0 1 1.00 1 0 0 0 0 1
...........TTGAGTGTGAATCCGATGAAAAG......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................GGCTAAACTTTTCGAGATTCATTC..................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................AATATGATGACCTCAATGAGG.............................................................................. 21 0 1 1.00 1 0 1 0 0 0
...............GTGTGAATCCGATGAAAAGGAAGAATA................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................TTCGAGATTCATTCGTAGAATTTGCT......................................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................TCGAGATTCATTCGTAGATTTTGCTAAC...................................... 28 1 1 1.00 1 0 1 0 0 0
....................................AGAATACGGAAAGGGTGTT.................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.......................................ATACGGAAAGGGCGTTATTTT............................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................GGCTAAACTTTTCGAGATTC......................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................ATAAGAAATATGATGACC....................................................................................... 18 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................AATGCGACAACCTTGTATATAAACTA.. 26 0 1 1.00 1 1 0 0 0 0
.......................................ATACGGAAAGGGTGTTATTTTTT............................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0
........................................TACGGAAAGGGTGTTATTTTTTATC.......................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
........................................TACGGAAAGGGTGTTATTT................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................CTAACTGAGACAGAAAATGC....................... 20 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................ATTTGCTAACTGAGACAGAAA........................... 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................GACAGAAAATGCGACAACCTTGTAT.......... 25 0 1 1.00 1 1 0 0 0 0
...................GAATCCGATGAAAAGGAAGAATACGGA............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................ATTCAATCGAATAGGCCTGGCCAGGACA...................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................ATGCGACAACCTTGTATATAAACTA.. 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................TAAACTTTTCGAGATTCATTCGTAGAATT............................................. 29 0 1 1.00 1 0 1 0 0 0
............TGAGTGTGAATCCGATGAAAAG......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...............................................................................ATCGTTGGCATTCTGCTATG........................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0
...........................TGAAAAGGAAGAATACGGAAAG.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
......................................................................................................................................................................................................GTAGAATTTGCTAACTGAGA................................. 20 0 1 1.00 1 1 0 0 0 0
.......................................ATACGGAAAGGGTGTTATTTT............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................TTCATTCGTAGAATTTGCT......................................... 19 0 1 1.00 1 0 0 0 1 0
......................................................................................................................................................................................TTTTCGAGATTCATTCGTAG................................................. 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................ACAGAAAATGCGACAACCTTGT............ 22 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................TCGAGATTCATTCGTAGAATTTGCTAAC...................................... 28 0 1 1.00 1 0 1 0 0 0
..................................................................................GTTGGTATTCTGCTGTGGA...................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0
..........................ATGAAAAGGATGAACACGGAG............................................................................................................................................................................................................ 21 3 11 0.09 1 0 0 1 0 0
........................................................................................................................................................................................................................GACAGAAGATGCGGCAAACT............... 20 3 16 0.06 1 0 0 1 0 0

Anti-sense strand reads

TTGTAGAGGAAAACTCACACTTAGGCTACTTTTCCTTCTTATGCCTTTCCCACAATAAAAAATAGAGTTTTTACTATTTTAGCAACCGTAAGACGATACCTTAGATAAGTTAGCTTATCCGGACCGGTCCTGTTATTAATTAGTTTTATTCTTTATACTACTGGAGTTACTCCACCGATTTGAAAAGCTCTAAGTAAGCATCTTAAACGATTGACTCTGTCTTTTACGCTGTTGGAACATATATTTGATCT
*****************************************************************************************************************************...................((((.((..(((((((....)))))))))))))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
..................................................................................................................................................................................................................TTGGCACTGTCTTTTACG....................... 18 2 8 0.13 1 1 0
............................................................................TTTTAGCGACCGGAAGAC............................................................................................................................................................. 18 2 13 0.08 1 0 1
.......................................................................................................................CGGACCGGTCCTGTGCGTAA................................................................................................................ 20 3 19 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004521:2156575-2156825 + dwi_1213 AACATC---------T---------CCTTTTGAGTGTGAA---------TCCGATGAAAAGGAAGAATACGGAAAGGGTGTTATTTTTTATCTCAAAAATGATAAAATCGTTGGCATTCTGCTATGGAATCTATTCAATCGAATAGGCCTGGCCAGGACAATAATTAATCAAAATAAGAAATATGATGACCTCAATGAGGTGGCTAAACTTTTCGAGATTCATTCGTAGAATTTGCTAACTGAG---------------------------------------------------------------------------------------------ACAGA----------------------------------------AAA----TGCGACA-ACCTTGTA-------------------TATA------------------AACTAGA-
droVir3 scaffold_12963:8496908-8497229 - ---------------------------CCTTGTATGCGAT---------CCGAACGAGGCACCCAATTATGGCAAGGGCGTCATTTTCTATCTGAAAAACGATAAAATTGTTGGCATATTATTGTGGAATCTATTCAATCGCATTGGACTGGCACGAACGATAATCAATGAGAACAAAGACTATGAGGATCTCAATGAAGTTGCCAAACTGTTCGAGATACACGCGTAGTGG-------------GGCTTTA------G-G-----AACTTGGGACT--ATTCAATTTACAAGCAA---T-----GTATG-TAAGTT--TAAGT---GGACACTG-A--AGCAAT--CATCCAG-ACGCCCAACGCTCC--AA---G-----ACT----TCAGTTT-AATGCATG-------------------TATAT--ATA------------TATTAGA-
droMoj3 scaffold_6500:1108597-1108796 - -------------------------TG----AGCTGCGAT---------CCCAGCGAGGAGCCGAACTATGGCAAGGGCGTCATCTTCTATCTGCAGAACGAAAAAATTGTTGGCATTTTATTGTGGAATCTATTCAATCGGATTGGACTGGCGCGGACGATAATCAATCAGAACAAAAGTTATGATGATCTCAATGAGGTTGCCAAACTATTTGAGATACACGCGTAATACTAG------------------------------------------------------------------------------------TTA------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:11689490-11689680 - -------------------------TG----AGCTGTGAT---------CCCAGTGAGGAGCCCAACTACGGCAAAGGTGTCATCTTTTATCTGCAGAACGACAAGATTGTCGGCATCCTGTTGTGGAATCTATTCAATCGCATTGGACTCGCACGCACGATAATCAGTCAGAATACGGACTACGAGGATCTCAATGAGGTCGCCAAATTGTTTGACATTCACGCGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group3:4283224-4283443 - AAAATC---------AAATTCAGATGTGGTCACCTGGGATGATGATGCCCATGGTGAGCAGCCGGACTACGGCCGGGGTGTGATCTTCTATTTAAAGAATGAAAAGATTGTTGGCGTTCTCATGTGGAACCTCTTTAGCCGCGTAGGCTTAGCTAGGACGATAATTAATCAAAATAAGAAGTACGATGACCTCAATGAGGTCGCCAAGTTGTTTGAAATCCACTCTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:5765729-5765948 - AAAATC---------AAATTCAGATGTGGTCACCTGGGATGATGATGCCCATGGTGAGCAGCCGGACTACGGCCGGGGTGTGATCTTCTATTTAAAGAATGAAAAGATTGTTGGCGTTCTCATGTGGAACCTCTTTAGCCGCGTAGGCTTAGCTAGGACGATAATTAATCAAAATAAGAAGTACGATGACCTCAATGAGGTCGCCAAGTTGTTTGAAATCCACTCTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:6317475-6317826 - GAGTGATAAG------------GATGGTGTTACCTGTAAT---------CCGGATGAATCGGAAAACTATGGAAAAGGTGTAATCTTCTATTTGAAAAACGATAAAGTCGTTGGTATTCTGCTGTGGAATCTTTTCAATCGAATAGGATTAGCTAGGACGATAATTAATCAGAATGCCAAGTACGATGACCTCAACGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGAGC--A----CCGAGTGTCCCCA------T-G-----GAGT--GGACAAAATATAA--------------T-----CCCTGGAATGCAAATCATG--CCGGCACCG-AACAGAAAT----------------------CCGAGTTCAGCATTTAAC----TGTGTATGAGTGTGTGCAACATGCAACATGCA----ACAT--ACAACT-G------AAACTGGAT
droBip1 scf7180000396568:502934-503269 + GACA----AG------------CCCGGTGTTACCTGTGAT---------CCCGAAGAATCGGAAAACTATGGCAAAGGTGTAATCTTCTATTTGAAAAACGATAAAGTCGTTGGCATTCTGCTGTGGAATCTTTTCAATCGAATAGGATTAGCTAGGACGATAATCAATCAGAATGCAAAGTACGATGACCTCAACGAGGTGGCCAAGCTGTTCGAGATCCACGCGTAGAGC--A----CCGAGTGTCCCCCAGTGGAGTG-----GACATAGAAACAAA-----------------------TATCCTGGAATGCAAATCAGCCGCCGCCACCG-AACAGAAA-----TC-----------------AGAGTTTAGCATTTAAATCTGTGTGTTT-CTAACG----------------CAATATATATACG------------------AAA-
droKik1 scf7180000302408:393751-394000 + -----------------------------TTGCCTCCGAT---------TCCGATAAGACGGCAAACTACGGCAAGGGCGTGGTGTTCTACATGAAGGACGATAAGATCGTGGGCGTCCTGCTCTGGAACCTCTTCAACCGGATAGGCTTAGCTAGGACAATAATTAATCAGAATAAGAAGTATGATGACCTCAATGAGGTGGCAAAACTATTCGAGATTCATGCGTAGAGAGCG----CCAAGAGTTTCAG------A-GATGGAAACCAAGGAGAAGGA-------------------------------------------------------------------------------------------------------------------------AAG-------------------TCCTT--GCA------------TCCTGGA-
droFic1 scf7180000453924:33812-34158 + AAACGCTGCCGTCGTTACCCCCGATGGAGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGAAAGGGTGTGATATTCTACTTGAAGAACGACAAGATTGTTGGAATCCTTCTGTGGAACCTTTTCAATAGGATAGGCTTAGCTAGGACGATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGACA--A----CCGAGTGTCCCTG------G-G-----GACCAAGGGAAA-AGC--------------CCATCAGTGTTCTGGAATGCTAATCAGC---CCGCACCG-ATCATAAA------------------------CGAAT---GCCTTCAAC----TGTGTTT-ATTGTGTA-------------------CATAT--GCAATT-G------CAACTAGA-
droEle1 scf7180000491273:1135089-1135435 - -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGAACAACTATGGCAAGGGTGTGATATTCTATCTTAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGG--A----CCGAGTGTCCCGA------G-G-----GACCAAGGAGAAGAA--AGC----------TAAACATTATCCTGGAAAGCTAATCAGC---CCGCAACGAAACAGAAACCGAATCAGA-A-----------CCGAAT---GCCTTTAAC--TATGTGTTT-ACTGTGTA-------------------CATAT--GCAACTAACTACTGCAACTAGA-
droRho1 scf7180000759283:30266-30598 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGTGGCCAACTATGGAAAGGGTGTGATATTCTATCTGAAGAACGACAAAATTGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGA--A----CCCAGTGTCCCGA------G-G-----GACCAAGGAAAAGATA--------------TAATCATTATCCTGGAAAGCTAATCAGC---CCGCACCG-AACACAAAC--GATCAGA-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CACAT--GCAACT-G------CAACTAGA-
droBia1 scf7180000301500:126678-127025 - CACC------------------GATGGCGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGCAAGGGTGTGATATTCTACTTGAAGAACGACAAGATCGTCGGTATTCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGAAA--C----CGGACTGTCCTGA------A-G-----GACTAAGGAGTGGATT--------------CTATCAGTATCCTGGAATGCCAAGCAGC---CCGCAGCGAAACAGAAAC--GATCAGAAC-----------CCGGAT---GCCTTAAAC----TATGTTT-ACTGTGTA-------------------CATAT--GCAACT-GCAACTGCAACTAGA-
droTak1 scf7180000415779:644600-644908 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGCAAGGGTGTGATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGAGA--A----CGGAGTGTCCTGA------A-G-----GACCTAGGAGAGAAAC--------------TTATCATTATCCTGGAAAGCTAATAAG--------------------------TCAGA-A-----------CCGAAT---GCCTTTAAC--TGTGTGTTT-ACTGTGTA-------------------CATAT--GCAACT-G------CA-------
droEug1 scf7180000409554:3929657-3929974 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGCAAGGGTGTGATATTCTATTTGAAAAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACGATAATCAATCAGAATAAGAAATACGATGACCTCAATGAGGTGGCCAAGCTGTTCGAGATTCACGCGTAGAGA--A----CCGACAGTCCCGA------GGG-----GACCAAGGAGAAAATC--------------TTATCATTATCCTGAAATGCTAATAAGT--------------------C--GATCAGT-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATAT--GCAACT-G------CAACTAGA-
dm3 chr2L:2154703-2155032 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGA--A----CAGCGAGTCCCGA------G-G-----GACCATGGAGAAGATCTGGC-----------------TACCCTGATATGCTTATCAGC---ACGCACCG-AACAGAACC--TATCCAA-C-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-
droSim2 2l:2048050-2048379 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGA--A----CTGCGAGTCCCGA------G-A-----GACCATGGAGAAGATCTGGC-----------------TACCCTGATATGCTTATCAGC---ACGCACCG-AACAGAAAC--GATCCAA-C-----------CCGAAT---GCCTTTAAA----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-
droSec2 scaffold_121:23043-23374 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGTGAG----CGGCGAGTCCCGA------G-G-----GACCATGGAGAAGATCTGGC-----------------TACCCTGATATGCTTATCAGC---ACGCACCG-AACAGAAAC--GATCCAA-C-----------CCGAAT---GCCTTTAAA----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-
droYak3 2L:2126357-2126686 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGAAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGTTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTATGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAAA--A----CAGAGAGTCCCTA------G-G-----GACCAAGGAGAAGATCTGGC-----------------TATCCTGATGTGCTTATCAGC---ACGCACCA-AACAGAAAC--GATCCAA-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-
droEre2 scaffold_4929:2189268-2189600 + -------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTACGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTTGAGATTCACGCGTAGAGA--A----CATAGAGTCCCTA------G-G-----GACCAAGGAGAAGATCTGGCTATCCTGATA---T-----GCCTGATATGCTTATCAGC---ACGCACCG-AACAGAAAC--GATCCAA-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CA-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AACATC---------T---------CCTTTTGAGTGTGAA---------TCCGATGAAAAGGAAGAATACGGAAAGGGTGTTATTTTTTATCTCAAAAATGATAAAATCGTTGGCATTCTGCTATGGAATCTATTCAATCGAATAGGCCTGGCCAGGACAATAATTAATCAAAATAAGAAATATGATGACCTCAATGAGGTGGCTAAACTTTTCGAGATTCATTCGTAGAATTTGCTAACTGAG---------------------------------------------------------------------------------------------ACAGA----------------------------------------AAA----TGCGACA-ACCTTGTA-------------------TATA------------------AACTAGA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................ATTCAATCGAATAGGCCTGGC.............................................................................................................................................................................................................................................................................................................2115.00500041
.....................................................................................................ATAAAATCGTTGGCATTCTGC............................................................................................................................................................................................................................................................................................................................................2112.00210010
...........................................................................................CTCAAAAATGATAAAATCGTTGGC...................................................................................................................................................................................................................................................................................................................................................2411.00100010
......................................................................................................................................................................................................................................ATTTGCTAACTGAG---------------------------------------------------------------------------------------------ACAG.................................................................................................................1811.00100010
.............................................................................................................................................................................ATAAGAAATATGATGACCTCAATGAGGT.............................................................................................................................................................................................................................................................2811.00100010
.................................................................................................................................................................................................AATGAGGTGGCTAAACTTTTCGAG.............................................................................................................................................................................................................................................2411.00100001
.............................TTGAGTGTGAA---------TCCGATGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.........................................................................................................................................................................................................GGCTAAACTTTTCGAGATTCATTC.....................................................................................................................................................................................................................................2411.00100010
...................................................................................................................................................................................AATATGATGACCTCAATGAGG..............................................................................................................................................................................................................................................................2111.00101000
.................................GTGTGAA---------TCCGATGAAAAGGAAGAATA.................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...................................................................................................................................................................................................................TTCGAGATTCATTCGTAGAATTTGCT.........................................................................................................................................................................................................................2611.00100010
...............................................................AGAATACGGAAAGGGTGTT....................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................................................................................................GGCTAAACTTTTCGAGATTC.........................................................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................ATAAGAAATATGATGACC.......................................................................................................................................................................................................................................................................1811.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................AA----TGCGACA-ACCTTGTA-------------------TATA------------------AACTA...2611.00100010
..................................................................ATACGGAAAGGGTGTTATTTTTT.............................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...................................................................TACGGAAAGGGTGTTATTTTTTATC..........................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...................................................................TACGGAAAGGGTGTTATTT................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................................CTAACTGAG---------------------------------------------------------------------------------------------ACAGA----------------------------------------AAA----TGC..............................................................2011.00100010
......................................................................................................................................................................................................................................ATTTGCTAACTGAG---------------------------------------------------------------------------------------------ACAGA----------------------------------------AA......................................................................2111.00100010
...................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------------ACAGA----------------------------------------AAA----TGCGACA-ACCTTGTA-------------------T.............................2511.00100010
.....................................GAA---------TCCGATGAAAAGGAAGAATACGGA.............................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....................................................................................................................................ATTCAATCGAATAGGCCTGGCCAGGACA......................................................................................................................................................................................................................................................................................................2811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................A----TGCGACA-ACCTTGTA-------------------TATA------------------AACTA...2511.00100010
............................................................................................................................................................................................................TAAACTTTTCGAGATTCATTCGTAGAATT.............................................................................................................................................................................................................................2911.00101000
..............................TGAGTGTGAA---------TCCGATGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................ATCGTTGGCATTCTGCTATG........................................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................TGAAAAGGAAGAATACGGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.................................................................................................................................................................................................................................GTAGAATTTGCTAACTGAG---------------------------------------------------------------------------------------------A....................................................................................................................2011.00100010
..................................................................ATACGGAAAGGGTGTTATTTT...............................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................TTCATTCGTAGAATTTGCT.........................................................................................................................................................................................................................1911.00110000
.................................................................................................................................................................................................................TTTTCGAGATTCATTCGTAG.................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................................................................................................................................................................................................................................ACAGA----------------------------------------AAA----TGCGACA-ACCTTGT..................................................2211.00100010
....................................................................................................................................................................................................................TCGAGATTCATTCGTAGAATTTGCTAAC......................................................................................................................................................................................................................2811.00101000
droVir3
---------------------------CCTTGTATGCGAT---------CCGAACGAGGCACCCAATTATGGCAAGGGCGTCATTTTCTATCTGAAAAACGATAAAATTGTTGGCATATTATTGTGGAATCTATTCAATCGCATTGGACTGGCACGAACGATAATCAATGAGAACAAAGACTATGAGGATCTCAATGAAGTTGCCAAACTGTTCGAGATACACGCGTAGTGG-------------GGCTTTA------G-G-----AACTTGGGACT--ATTCAATTTACAAGCAA---T-----GTATG-TAAGTT--TAAGT---GGACACTG-A--AGCAAT--CATCCAG-ACGCCCAACGCTCC--AA---G-----ACT----TCAGTTT-AATGCATG-------------------TATAT--ATA------------TATTAGA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................GTGG-------------GGCTTTA------G-G-----AACTTGGGAC..................................................................................................................................................................................2312.002000000000200000000000000000000000000000000000000000000000000000
......................................................................................................................................TCAATCGCATTGGACTGGCAC...........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................GCATTGGACTGGCACGAACGA.....................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CATCCAG-ACGCCCAACGCTCC--...................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTTT-AATGCATG-------------------TATAT--AT.....................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATTCAATCGCATTGGACTGGCACGAAC.......................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTTT-AATGCATG-------------------TATAT--ATA------------TATT....2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AT--CATCCAG-ACGCCCAACGCTA......................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................TCTGAAAAACGATAAAATTGTTGGCATATTATTG..........................................................................................................................................................................................................................................................................................................................................3411.001000000000000000000000000000000000000000000000000000010000000000
..............................TGTATGCGAT---------CCGAACGAG............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GAGAACAAAGACTATGAGGAG........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................CCTTGTATGCGAT---------CCGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAGTTGCCAAACTGTTCGAGA............................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CAAGCAA---T-----GTATG-TAAGTT--TAAG...................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................GAACAAAGACTATGAGGATCTCAAT..................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATATTATTGTGGAATCTATTCA.............................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
......................................................CGAGGCACCCAATTATGGCAAGGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACTTGGGACT--ATTCAATTTACAAGC................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AATTTACAAGCAA---T-----GTATG-TAAA...........................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GACT--ATTCAATTTACAAGCAA---T-----GTATG-T..............................................................................................................................................2811.001000000000000000000000000000000000000010000000000000000000000000
.....................................GAT---------CCGAACGAGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................T-----GTATG-TAAGTT--TAAGT---GGAC...........................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTT--TAAGT---GGACACTG-A--AGC................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...................................GCGAT---------CCGAACGAGGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TA------G-G-----AACTTGGGACT--ATTCA..........................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GAGATACACGCGTAGTGG-------------GGC..............................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................TTGGACTGGCACGAACGATAATCAATGAGAACAAAGACTATGAG...........................................................................................................................................................................................................................................................................4411.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................TGAAGTTGCCAAACTGTTCGA..............................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................GAACAAAGACTATGAGGAT........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TG-TAAGTT--TAAGT---GGACACTG-A--AGC................................................................................................................2511.001000001000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CAAAGACTATGAGGATCTCA....................................................................................................................................................................................................................................................................2011.001000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGCAA---T-----GTATG-TAAGTT--TA.....................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GATACACGCGTAGTGG-------------GGCT.............................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................GTAGTGG-------------GGCTTTA------G-G-----AACTTGG.....................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCATTGGACTGGCACGAAC.......................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATATTATTGTGGAATCTATTCAAT...........................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CCAG-ACGCCCAACGCTCC--A..................................................................................1911.001000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................ATATTATTGTGGAATCTATTCAATCGC........................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
...............................................................CAATTATGGCAAGGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................GCAAGGGCGTCATTTTCTATCTGAAAA....................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000001000000000000000000000000000000000000000000
...............................GTATGCGAT---------CCGAACGAGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................CAATCGCATTGGACTGGCACGAAC.......................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................CAAAGACTATGAGGATCTCAATGAA...............................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTT--TAAGT---GGACACTG-A--AGCA...............................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................GCCAAACTGTTCGAGATAC.........................................................................................................................................................................................................................................1920.501000000000000000000000000000001000000000000000000000000000000000
droMoj3
-------------------------TG----AGCTGCGAT---------CCCAGCGAGGAGCCGAACTATGGCAAGGGCGTCATCTTCTATCTGCAGAACGAAAAAATTGTTGGCATTTTATTGTGGAATCTATTCAATCGGATTGGACTGGCGCGGACGATAATCAATCAGAACAAAAGTTATGATGATCTCAATGAGGTTGCCAAACTATTTGAGATACACGCGTAATACTAG------------------------------------------------------------------------------------TTA------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................CTATTCAATCGGATTGGACTGGC.............................................................................................................................................................................................................................................................................................................2311.001000001
........................................................AGGAGCCGAACTATGGCAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..................................................................................................................................................................AATCAATCAGAACAAAAGTT................................................................................................................................................................................................................................................................................2011.001010000
droGri2
-------------------------TG----AGCTGTGAT---------CCCAGTGAGGAGCCCAACTACGGCAAAGGTGTCATCTTTTATCTGCAGAACGACAAGATTGTCGGCATCCTGTTGTGGAATCTATTCAATCGCATTGGACTCGCACGCACGATAATCAGTCAGAATACGGACTACGAGGATCTCAATGAGGTCGCCAAATTGTTTGACATTCACGCGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................TAATCAGTCAGAATACGGACT................................................................................................................................................................................................................................................................................2111.00110
.........................................................................................................................................ATCGCATTGGACTCGCACGCACGATA...................................................................................................................................................................................................................................................................................................2611.00110
dp5
AAAATC---------AAATTCAGATGTGGTCACCTGGGATGATGATGCCCATGGTGAGCAGCCGGACTACGGCCGGGGTGTGATCTTCTATTTAAAGAATGAAAAGATTGTTGGCGTTCTCATGTGGAACCTCTTTAGCCGCGTAGGCTTAGCTAGGACGATAATTAATCAAAATAAGAAGTACGATGACCTCAATGAGGTCGCCAAGTTGTTTGAAATCCACTCTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................TTGTTGGCGTTCTCATGTGG.......................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................CATGGTGAGCAGCCGGACTACGGCC............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.....................................GATGATGATGCCCATGGTGAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
.........................................................................................................GATTGTTGGCGTTCTCATGTG........................................................................................................................................................................................................................................................................................................................................2111.0010000100000
...............................................................................................................................................................................AAGAAGTACGATGACCTCAATGAGGT.............................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................AGAATGAAAAGATTGTTGGCGT.................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
................AATTCAGATGTGGTCACCTGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.....................................................................................................................TCTCATGTGGAACCTCTTTA.............................................................................................................................................................................................................................................................................................................................2011.0010000000100
..................TTCAGATGTGGTCACCTGGG................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................TAAAGAATGAAAAGATTGTTGGC...................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................................................................................................AAAGATTGTTGGCGTTCTC.............................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................TTGGCGTTCTCATGTGGAAC....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................AGAATGAAAAGATTGTTGG....................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
AAAATC---------AAATTCAGATGTGGTCACCTGGGATGATGATGCCCATGGTGAGCAGCCGGACTACGGCCGGGGTGTGATCTTCTATTTAAAGAATGAAAAGATTGTTGGCGTTCTCATGTGGAACCTCTTTAGCCGCGTAGGCTTAGCTAGGACGATAATTAATCAAAATAAGAAGTACGATGACCTCAATGAGGTCGCCAAGTTGTTTGAAATCCACTCTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................ATGAAAAGATTGTTGGCGTT................................................................................................................................................................................................................................................................................................................................................2014.004301000
......................................................................................................................CTCATGTGGAACCTCTTTAGC...........................................................................................................................................................................................................................................................................................................................2113.003300000
................................................................................................GAATGAAAAGATTGTTGGCGT.................................................................................................................................................................................................................................................................................................................................................2113.003300000
...................................................................................................TGAAAAGATTGTTGGCGTT................................................................................................................................................................................................................................................................................................................................................1912.002200000
........................................................................................................................................AGCCGCGTAGGCTTAGCTAGGAC.......................................................................................................................................................................................................................................................................................................2312.002200000
.......................................................................................................................................................................................................GTCGCCAAGTTGTTTGAAATC..........................................................................................................................................................................................................................................2112.002101000
...........................................................................................................................................CGCGTAGGCTTAGCTAGGACG......................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................CGCGTAGGCTTAGCTAGGAC.......................................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................TAAAGAATGAAAAGATTGTTGGCGG.................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................CGCGTAGGCTTAGCTAGGACGAT....................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................ACGGCCGGGGTGTGATCTTCTATT..........................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................ATTCAGATGTGGTCACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................GTCGCCAAGTTGTTTGAAATCCACT......................................................................................................................................................................................................................................2511.001001000
................................................................................................GAATGAAAAGATTGTTGGCGTT................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................CGCCAAGTTGTTTGAAATCCA........................................................................................................................................................................................................................................2111.001001000
.........................................................................................................................................................................................................CGCCAAGTTGTTTGAAATC..........................................................................................................................................................................................................................................1911.001100000
...............AAATTCAGATGTGGTCACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droAna3
GAGTGATAAG------------GATGGTGTTACCTGTAAT---------CCGGATGAATCGGAAAACTATGGAAAAGGTGTAATCTTCTATTTGAAAAACGATAAAGTCGTTGGTATTCTGCTGTGGAATCTTTTCAATCGAATAGGATTAGCTAGGACGATAATTAATCAGAATGCCAAGTACGATGACCTCAACGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGAGC--A----CCGAGTGTCCCCA------T-G-----GAGT--GGACAAAATATAA--------------T-----CCCTGGAATGCAAATCATG--CCGGCACCG-AACAGAAAT----------------------CCGAGTTCAGCATTTAAC----TGTGTATGAGTGTGTGCAACATGCAACATGCA----ACAT--ACAACT-G------AAACTGGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................GTGTATGAGTGTGTGCAACATG..........................................2212.002000002
..............................................................................................................................................................................................................................................................................................................................................G-AACAGAAAT----------------------CCGAGTTCAGCAT..........................................................................2311.001010000
....GATAAG------------GATGGTGTTACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACATGCA----ACAT--ACAACT-G------AAAC.....2311.001010000
.......................................................................................................AAAGTCGTTGGTATTCTGCTGTGGA......................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................................................GGAATGCAAATCATG--CCGGCAC.........................................................................................................................2211.001010000
..................................................................................................................................................................................................................................................................................................................................TG--CCGGCACCG-AACAGAA...............................................................................................................1811.001000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACATGCA----ACAT--ACAACT-G------AAA......2211.001010000
...............................................................AAACTATGGAAAAGGTGTAATCTT...............................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................................................................................................................................................TTAGCTAGGACGATAATTAATCAGAAT.......................................................................................................................................................................................................................................................................................2711.001010000
...............................................................................................................................................................................................................................GCGTAGAGC--A----CCGAGTGTCC.............................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................TTTAAC----TGTGTATGAGTGTGTG.................................................2211.001000010
.............................................................................................................................................................................ATGCCAAGTACGATGACCTCAAC..................................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................CCGAGTTCAGCATTTAAC----C................................................................1920.501010000
droBip1
GACA----AG------------CCCGGTGTTACCTGTGAT---------CCCGAAGAATCGGAAAACTATGGCAAAGGTGTAATCTTCTATTTGAAAAACGATAAAGTCGTTGGCATTCTGCTGTGGAATCTTTTCAATCGAATAGGATTAGCTAGGACGATAATCAATCAGAATGCAAAGTACGATGACCTCAACGAGGTGGCCAAGCTGTTCGAGATCCACGCGTAGAGC--A----CCGAGTGTCCCCCAGTGGAGTG-----GACATAGAAACAAA-----------------------TATCCTGGAATGCAAATCAGCCGCCGCCACCG-AACAGAAA-----TC-----------------AGAGTTTAGCATTTAAATCTGTGTGTTT-CTAACG----------------CAATATATATACG------------------AAA-SizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------TTGCCTCCGAT---------TCCGATAAGACGGCAAACTACGGCAAGGGCGTGGTGTTCTACATGAAGGACGATAAGATCGTGGGCGTCCTGCTCTGGAACCTCTTCAACCGGATAGGCTTAGCTAGGACAATAATTAATCAGAATAAGAAGTATGATGACCTCAATGAGGTGGCAAAACTATTCGAGATTCATGCGTAGAGAGCG----CCAAGAGTTTCAG------A-GATGGAAACCAAGGAGAAGGA-------------------------------------------------------------------------------------------------------------------------AAG-------------------TCCTT--GCA------------TCCTGGA-SizeHit CountTotal NormTotal
No Reads
droFic1
AAACGCTGCCGTCGTTACCCCCGATGGAGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGAAAGGGTGTGATATTCTACTTGAAGAACGACAAGATTGTTGGAATCCTTCTGTGGAACCTTTTCAATAGGATAGGCTTAGCTAGGACGATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGACA--A----CCGAGTGTCCCTG------G-G-----GACCAAGGGAAA-AGC--------------CCATCAGTGTTCTGGAATGCTAATCAGC---CCGCACCG-ATCATAAA------------------------CGAAT---GCCTTCAAC----TGTGTTT-ATTGTGTA-------------------CATAT--GCAATT-G------CAACTAGA-SizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGAACAACTATGGCAAGGGTGTGATATTCTATCTTAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGG--A----CCGAGTGTCCCGA------G-G-----GACCAAGGAGAAGAA--AGC----------TAAACATTATCCTGGAAAGCTAATCAGC---CCGCAACGAAACAGAAACCGAATCAGA-A-----------CCGAAT---GCCTTTAAC--TATGTGTTT-ACTGTGTA-------------------CATAT--GCAACTAACTACTGCAACTAGA-SizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGTGGCCAACTATGGAAAGGGTGTGATATTCTATCTGAAGAACGACAAAATTGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGA--A----CCCAGTGTCCCGA------G-G-----GACCAAGGAAAAGATA--------------TAATCATTATCCTGGAAAGCTAATCAGC---CCGCACCG-AACACAAAC--GATCAGA-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CACAT--GCAACT-G------CAACTAGA-SizeHit CountTotal NormTotal
No Reads
droBia1
CACC------------------GATGGCGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGCAAGGGTGTGATATTCTACTTGAAGAACGACAAGATCGTCGGTATTCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGAAA--C----CGGACTGTCCTGA------A-G-----GACTAAGGAGTGGATT--------------CTATCAGTATCCTGGAATGCCAAGCAGC---CCGCAGCGAAACAGAAAC--GATCAGAAC-----------CCGGAT---GCCTTAAAC----TATGTTT-ACTGTGTA-------------------CATAT--GCAACT-GCAACTGCAACTAGA-SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGCAAGGGTGTGATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCATGCGTAGAGA--A----CGGAGTGTCCTGA------A-G-----GACCTAGGAGAGAAAC--------------TTATCATTATCCTGGAAAGCTAATAAG--------------------------TCAGA-A-----------CCGAAT---GCCTTTAAC--TGTGTGTTT-ACTGTGTA-------------------CATAT--GCAACT-G------CA-------SizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGCCAACTATGGCAAGGGTGTGATATTCTATTTGAAAAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACGATAATCAATCAGAATAAGAAATACGATGACCTCAATGAGGTGGCCAAGCTGTTCGAGATTCACGCGTAGAGA--A----CCGACAGTCCCGA------GGG-----GACCAAGGAGAAAATC--------------TTATCATTATCCTGAAATGCTAATAAGT--------------------C--GATCAGT-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATAT--GCAACT-G------CAACTAGA-SizeHit CountTotal NormTotal
No Reads
dm3
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGA--A----CAGCGAGTCCCGA------G-G-----GACCATGGAGAAGATCTGGC-----------------TACCCTGATATGCTTATCAGC---ACGCACCG-AACAGAACC--TATCCAA-C-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...............................................................................................................CGGCATCCTGCTGTGGAACCTCTTC..............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AAT---GCCTTTAAC----TGTGTTT-ACT......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AGGCGGGCAACTATGGCAAGG.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TATGGCAAGGGTGTAATAT................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................CTGTGAT---------CCCGATGAGGCGGGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGC---ACGCACCG-AACAGAACC--TATCCAA-...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CAAGATCGTCGGCATCCTG.............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CGAGATTCACGCGTAGAG...............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TATTCTACTTGAAGAACGACAAG............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TCACGCGTAGAGA--A----CAGCGAG................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AAC----TGTGTTT-ACTGTGTA-------------------CATT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TCAGC---ACGCACCG-AACAGAACC--TA.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACCTGTGAT---------CCCGATGAGGCGGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GATCTGGC-----------------TACCCTGATATGCTT........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGA--A----CTGCGAGTCCCGA------G-A-----GACCATGGAGAAGATCTGGC-----------------TACCCTGATATGCTTATCAGC---ACGCACCG-AACAGAAAC--GATCCAA-C-----------CCGAAT---GCCTTTAAA----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................TT-ACTGTGTA-------------------CATTT--GCAACT-G------CAAC.....2615.00500000012020000000
...........................................................................................................................................................................................................................................................................................................................................................................................................T-ACTGTGTA-------------------CATTT--GCAACT-G------CAAC.....2514.00400010020100000000
........................................................................................................................................AATCGGATAGGCTTAGCTAG..........................................................................................................................................................................................................................................................................................................2012.00200200000000000000
...........................................................................................................................................................................................................................................................................ACCATGGAGAAGATCTGGC-----------------TACCCTGA...............................................................................................................................................2712.00200000000000011000
.........................................................................................................................................................TAGGACAATAATCAATCAGAATAAGAAGT................................................................................................................................................................................................................................................................................2912.00200000000000002000
...........................................................................................................................................................................................................................................................................................................................................................................................................T-ACTGTGTA-------------------CATTT--GCAACT-G------CAACT....2612.00200000000200000000
......................................................................................................................................TCAATCGGATAGGCTTAGCTAGG.........................................................................................................................................................................................................................................................................................................2311.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................TTTAAA----TGTGTTT-ACTGTGTA-------------------CATT..........................2511.00100000000100000000
................................................................................................GAACGACAAGATCGTCGGCATCC...............................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
............................GTTACCTGTGAT---------CCCGATGA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
....................................................................................................................TCCTGCTGTGGAACCTCTTCAATCGG........................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-2611.00100000000010000000
.................................................................................................................................................................................................................................................GCGAGTCCCGA------G-A-----GACC........................................................................................................................................................................................1711.00100000000001000000
.....................................................................................................................................TTCAATCGGATAGGCTTAGCTAG..........................................................................................................................................................................................................................................................................................................2311.00100000000000001000
..............................................................................................................................................................................................................................................................................ATGGAGAAGATCTGGC-----------------TACCCC.................................................................................................................................................2211.00101000000000000000
.......................................................................................................................TGCTGTGGAACCTCTTCAATCGGA.......................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
................................................................................................................................................................................................................................CGTAGAGA--A----CTGCGAGTCCCGA------G-..................................................................................................................................................................................................2311.00101000000000000000
...........................................................CGGGCAACTATGGCAAGGGTG......................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..................................................................................................................................................................................................................................................................G-A-----GACCATGGAGAAGATCTGGC-----------------TAC....................................................................................................................................................2511.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................CACCG-AACAGAAAC--GATCCAA-C-----------CCGAA..................................................................................2711.00100010000000000000
......................................................................................TCTACTTGAAGAACGACAAGAT..........................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
.............................................................................................................GTCGGCATCCTGCTGTGGAACC...................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACT....2711.00100000001000000000
.................................................................................................................................................................................................................................GTAGAGA--A----CTGCGAGTCCCGA------G-A-----............................................................................................................................................................................................2311.00100100000000000000
..............................................................................................................................................................................TAAGAAGTACGATGACCTCAATGAGG..............................................................................................................................................................................................................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................CGCACCG-AACAGAAAC--GATCCAA-C-----------CCGAA..................................................................................2911.00100000010000000000
...............................................................................................AGAACGACAAGATCGTCGGC...................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................................TGTTCGAGATTCACGCGTAGAGA--A----CTGCGA.................................................................................................................................................................................................................3011.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TT-ACTGTGTA-------------------CATTT--GCAACT-G------C........2311.00100000000100000000
.............................................................................................................................................................................................................................................................................CATGGAGAAGATCTGGC-----------------TACCCTGA...............................................................................................................................................2511.00100000000100000000
............................................................................................................................................................................................................................................................................................................................TTATCAGC---ACGCACCG-AACAGAAAC--G..........................................................................................................2611.00100000000000001000
.....................................................................................................................................................................CAATCAGAATAAGAAGTACGAT...........................................................................................................................................................................................................................................................................2211.00101000000000000000
.......................................................................................................................................................................................................................AGATTCACGCGTAGAGA--A----CTG....................................................................................................................................................................................................................2111.00100010000000000000
..........................................................................................................................TGTGGAACCTCTTCAATCGGA.......................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.................................................................................................................................................................................................................................GTAGAGA--A----CTGCGAGTCCCGA------....................................................................................................................................................................................................2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CA.......2711.00100000000100000000
.................................................................................................AACGACAAGATCGTCGGCATCCT..............................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...............................................................................................................................................................................................................................................................................TGGAGAAGATCTGGC-----------------TACCCTGATATG...........................................................................................................................................2711.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................ACCG-AACAGAAAC--GA.........................................................................................................1530.33100000001000000000
..............................................................................................................................................................................................................................................................................ATGGAGAAGATCTGG.........................................................................................................................................................................1570.14100000000001000000
droSec2
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAGTGAG----CGGCGAGTCCCGA------G-G-----GACCATGGAGAAGATCTGGC-----------------TACCCTGATATGCTTATCAGC---ACGCACCG-AACAGAAAC--GATCCAA-C-----------CCGAAT---GCCTTTAAA----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................GGCCAAACTGTTCGAGATT..........................................................................................................................................................................................................................................1912.0020020
............................................................GGGCAACTATGGCAAGGGT.......................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.........................................................................................................................................................................................................................................................................................................................................GCACCG-AACAGAAAC--GAT........................................................................................................1812.0020020
.............................................................................................................................................................................................................................................................................................................................................CG-AACAGAAAC--GATCCAA-C-----------CCGAAT---GC............................................................................2711.0011000
....................................................................................................................................................................................................................................................................................................................................................GAAAC--GATCCAA-C-----------CCGAAT---GCC...........................................................................2211.0010010
.........................................................GGCGGGCAACTATGGCAAGGGT.......................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................CACCG-AACAGAAAC--GATC.......................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................GCACCG-AACAGAAAC--GATC.......................................................................................................1911.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTA-------------------CATTT--GCAACT-G------C........2011.0010100
....................................................................................................................................................................................................................................................................................................................................................GAAAC--GATCCAA-C-----------CCGAAT---GCCT..........................................................................2311.0010100
.........................................................................................................................................................................................................................................................................................................................................GCACCG-AACAGAAAC--GATCCAA-C-----------C......................................................................................2411.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................GTTT-ACTGTGTA-------------------CATTT--GCAACT-G------C........2511.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................GTTT-ACTGTGTA-------------------CATTT--GCAAC..................2211.0010010
.............................................................................................................................GGAACCTCTTCAATCGGATAGGCTT................................................................................................................................................................................................................................................................................................................2511.0010010
..............................TACCTGTGAT---------CCCGATGAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.............................................................................................................................................................................................................AAACTGTTCGAGATTCACGC.....................................................................................................................................................................................................................................2011.0010010
............................................................GGGCAACTATGGCAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
......................................................................................................................................................................................................................................GTGAG----CGGCGAGTCCCGA------G-G-----............................................................................................................................................................................................2011.0010100
.....................................................................................................................................................................................................................................................................................................................................................AAAC--GATCCAA-C-----------CCGAAT---GCC...........................................................................2111.0010010
........................................................................................TACTTGAAGAACGACAAGATCG........................................................................................................................................................................................................................................................................................................................................................2211.0011000
..........................................................................................................................TGTGGAACCTCTTCAATCGGATA.....................................................................................................................................................................................................................................................................................................................2311.0010010
......................................................................................................................................................................AATCAGAATAAGAAGTACGAT...........................................................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................GAGATTCACGCGTAGAGTGAG----C......................................................................................................................................................................................................................2211.0010010
droYak3
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGAAACTATGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGTTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTATGATGACCTCAATGAGGTGGCCAAACTGTTCGAGATTCACGCGTAGAAA--A----CAGAGAGTCCCTA------G-G-----GACCAAGGAGAAGATCTGGC-----------------TATCCTGATGTGCTTATCAGC---ACGCACCA-AACAGAAAC--GATCCAA-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAACTAGA-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................GGGAAACTATGGCAAGGGT.......................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTT-ACTGTGTA-------------------CATTT--GCAACT-G------CAAC.....2711.00100010000000
..................................................................................................................................................................................................................GTTCGAGATTCACGCGTAGA................................................................................................................................................................................................................................2011.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................AAAC--GATCCAA-A-----------CCGAAT---GCC...........................................................................2111.00100100000000
.........................................................................................................................................................................................................GGCCAAACTGTTCGAGATTCACGCGT...................................................................................................................................................................................................................................2611.00100010000000
...............................................................................................AGAACGACAAGATCGTCGGCATCCT..............................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...............................ACCTGTGAT---------CCCGATGAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................AATATTCTACTTGAAGAACGAC...............................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............................................................................................................................................................................................................................................................................CCAAGGAGAAGATCTGGC-----------------TATCCT.................................................................................................................................................2411.00101000000000
.........................................................GGCGGGAAACTATGGCAAGGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................................................ATAATCAATCAGAATAAGAAGTAT..............................................................................................................................................................................................................................................................................2411.00100000010000
...............................................................................GTAATATTCTACTTGAAGAAC..................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................................................ATCAATCAGAATAAGAAGT................................................................................................................................................................................................................................................................................1911.00100000010000
droEre2
-------------------------GGCGTTACCTGTGAT---------CCCGATGAGGCGGGCAACTACGGCAAGGGTGTAATATTCTACTTGAAGAACGACAAGATCGTCGGCATCCTGCTGTGGAACCTCTTCAATCGGATAGGCTTAGCTAGGACAATAATCAATCAGAATAAGAAGTACGATGACCTCAATGAGGTGGCCAAACTGTTTGAGATTCACGCGTAGAGA--A----CATAGAGTCCCTA------G-G-----GACCAAGGAGAAGATCTGGCTATCCTGATA---T-----GCCTGATATGCTTATCAGC---ACGCACCG-AACAGAAAC--GATCCAA-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------CATTT--GCAACT-G------CA-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................GGGCAACTACGGCAAGGGT.......................................................................................................................................................................................................................................................................................................................................................................................1912.0020100100
.....................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTT-ACTGTGTA-------------------CATTT--GCAAC..................2511.0011000000
......................................................................................................CAAGATCGTCGGCATCCTGCTGT.........................................................................................................................................................................................................................................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................GAAT---GCCTTTAAC----TGTGTTT-ACTGT....................................................2511.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................AAT---GCCTTTAAC----TGTGTTT-ACTGTGTA-------------------..............................2711.0010100000
..................................................................................................................................................................................................ATGAGGTGGCCAAACTGTTTGAG.............................................................................................................................................................................................................................................2311.0010001000
............................................................................................................................................................................................................................................................................................GCTATCCTGATA---T-----GCCTGAT..............................................................................................................................................2011.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTGTA-------------------CATTT--GCAACT-G------C........1911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................A-A-----------CCGAAT---GCCTTTAAC----TGTGTTT-.........................................................2411.0010001000
..........................................................................................................................................................................................................................................................................GACCAAGGAGAAGATCTGG.........................................................................................................................................................................1911.0010000010
..................................TGTGAT---------CCCGATGAGGCGGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
................................CCTGTGAT---------CCCGATGAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.......................................................................................................................................................................................................GTGGCCAAACTGTTTGAGATTC.........................................................................................................................................................................................................................................2211.0010100000
........................................................................................................................................................................................................................................................................................................................ATGCTTATCAGC---ACGCACCG-AACAGA................................................................................................................2611.0010000100
............................................................................................................................................................................................................................................................................CCAAGGAGAAGATCTGGCTATC....................................................................................................................................................................2211.0010100000
......................................................................................................................................................................AATCAGAATAAGAAGTAC..............................................................................................................................................................................................................................................................................1811.0010100000
..........................................................................................................................................................................................................................................................TA------G-G-----GACCAAGGAGAAGATCTGGCTA......................................................................................................................................................................2611.0011000000
................................................................................................GAACGACAAGATCGTCGGCATCCTGCT...........................................................................................................................................................................................................................................................................................................................................2711.0010100000

Generated: 05/18/2015 at 12:55 AM