ID:

dwi_1195

 Coordinate:

scf2_1100000004521:246909-247059 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.8 -31.2 -31.1

Flybase annnotation

intron [Dwil\GK15071-in]; exon [dwil_GLEANR_15350:7]; CDS [Dwil\GK15071-cds]; intron [Dwil\GK15071-in]

No Repeatable elements found

Sense Strand Reads

-#################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTTCTCAATGAAAAAAGCGAAGACGACGATGGCAGCGGTATCAGTGGCGGTGGAGTTGGCGGCATTGGCTCTGGCCATCCGGGAGTAGGTCTCAATAATAGCCGGCAAAGTGAACTGATGCGTCAATTGCAAAAGGACGATGGCGGCTCACATGGTTCCATGATGCGTGCAGGAGCCAATGCCAATATGAGTAACGAAGATCTCAAGGCAATGCTGAAAATCCAACCCGATCCACAAATGAGTCGCAAAC
*********************************************************************..((((....))))(((.....)))......(((((.((..((...((..((((.....))))..)).))..)).)))))....(((((((.((.......)))))))))..********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 M020
head
...................................................................................................................................................................................ATGCCGGTATGAGTAGCGAA.................................................... 20 3 1 21.00 21 14 7 0 0
...................................................................................................................................................................................ATGCCGGTATGAGTAGCGA..................................................... 19 3 2 20.50 41 34 5 0 2
..................................................................................................................................................................................AATGCCGGTATGAGTAGCGA..................................................... 20 3 1 11.00 11 7 4 0 0
..................................................................................................................................................................................AATGCCGGTATGAGTAGCGAA.................................................... 21 3 1 11.00 11 6 5 0 0
..................................................................................................................................................................................AATGCCGGTATGAGTAGCG...................................................... 19 3 3 8.67 26 23 2 0 1
..................................................................................................................................................................................AATGCCGGTATGAGTAGC....................................................... 18 3 20 5.70 114 110 4 0 0
...............................................................................................................................................................CATGATGCGTGCAGGAGCCAAT...................................................................... 22 0 1 3.00 3 0 1 2 0
...............................................................................................................................................................................................GTAACGAAGATCTCAAGGC......................................... 19 0 1 3.00 3 0 0 0 3
...................................................................................................................................................................................ATGCCGGTATGAGTAGCG...................................................... 18 3 16 2.19 35 34 1 0 0
..........GAAAAAAGCGAAGACGACGAT............................................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0
........................................ATCAGTGGCGGTGGAGTTGGC.............................................................................................................................................................................................. 21 0 1 2.00 2 0 1 1 0
..................................................................................................................................................................................AATGCCAATATGAGTAACGAAG................................................... 22 0 1 2.00 2 1 1 0 0
........................................................................................................................................................ATGGTTCCATGATGCGTGCAGGA............................................................................ 23 0 1 1.00 1 0 1 0 0
....................................................................................................................................................TCACATGGTTCCATGATGCGTGCAGGA............................................................................ 27 0 1 1.00 1 0 1 0 0
.....................................................................CTCTGGCCATCCGGGAGTAGGT................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0
............................................................................................................................CAATTGCAAAAGGACGATGGCGGCT...................................................................................................... 25 0 1 1.00 1 0 0 1 0
.............................................................................................................................AATTGCAAAAGGACGATGGCGGCTC..................................................................................................... 25 0 1 1.00 1 0 0 0 1
...............................................................................................................................................................CATGATGCGTGCAGGAGCCAATGC.................................................................... 24 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................................GTAACGAAGATCTCAAGGCAATGC.................................... 24 0 1 1.00 1 0 0 1 0
............................................................................................................................................ATGGCGGCTCACATGGTT............................................................................................. 18 0 1 1.00 1 1 0 0 0
..............................................................................................................GTGAACTGATGCGTCAATTGCAAAAGG.................................................................................................................. 27 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................................GTAACGAAGATCTCAAGGCAATGCT................................... 25 0 1 1.00 1 1 0 0 0
.....................AGACGACGATGGCAGCGGTATCAGT............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................................AATCCAACCAGATCCACTA............. 19 2 1 1.00 1 1 0 0 0
..............................................................................................................................................................CCATGATGCGTGCAGGAGCCAAT...................................................................... 23 0 1 1.00 1 0 0 1 0
.........................GACGATGGCAGCGGTATCAGT............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0
..............................................................................................................GTGAACTGATGCGTCAAT........................................................................................................................... 18 0 1 1.00 1 0 0 0 1
................................................................................................................................................................ATGATGCGTGCAGGAGCCAAT...................................................................... 21 0 1 1.00 1 0 1 0 0
...................................................................................................TAGCCGGCAAAGTGAACTGATGC................................................................................................................................. 23 0 1 1.00 1 0 0 1 0
........................................................................................................GGCAAAGTGAACTGATGCGT............................................................................................................................... 20 0 1 1.00 1 0 1 0 0
..........................................................................GCCATGCGAGAGTAGGTC............................................................................................................................................................... 18 2 1 1.00 1 1 0 0 0
...................GAAGACGACGATGGCAGCGGT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................TGGTTCCATGATGCGTGCA............................................................................... 19 0 1 1.00 1 0 0 1 0
...................................................TGGAGTTGGCGGCATTGGCTC................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0
.....................AGACGACGATGGCAGCGGT................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0
......................................................AGTTGGCGGAATTAGTTCTG................................................................................................................................................................................. 20 3 9 0.67 6 0 0 6 0
....................................................................................................................................................................................TGCCGGTATGAGTAGCGAA.................................................... 19 3 12 0.42 5 4 1 0 0
..................................................................................................................................................................................AATGCTGACATGAGTAACGAA.................................................... 21 3 3 0.33 1 1 0 0 0
............................................................................CATCCGGGAGTCGGGCGC............................................................................................................................................................. 18 3 15 0.07 1 1 0 0 0
...................................................................................................................................................................................................CGATGATCTCGAGGAAATGC.................................... 20 3 15 0.07 1 1 0 0 0
............................................................................................................................................................................................................................ATCTAACCCGATGCACAAC............ 19 3 16 0.06 1 1 0 0 0
..................................................GCGGTGTTGGCGGAATTGGC..................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0
...................................................................................................................ATGATGCGTCAATTGCAT...................................................................................................................... 18 2 20 0.05 1 0 0 1 0
................................................................................................................................TGCTCAAGGATGATGGCGG........................................................................................................ 19 3 20 0.05 1 0 1 0 0
............................................................................................................................................................................................................................ATCCAACCCGACCCACCA............. 18 2 20 0.05 1 1 0 0 0

Anti-sense strand reads

CGAAGAGTTACTTTTTTCGCTTCTGCTGCTACCGTCGCCATAGTCACCGCCACCTCAACCGCCGTAACCGAGACCGGTAGGCCCTCATCCAGAGTTATTATCGGCCGTTTCACTTGACTACGCAGTTAACGTTTTCCTGCTACCGCCGAGTGTACCAAGGTACTACGCACGTCCTCGGTTACGGTTATACTCATTGCTTCTAGAGTTCCGTTACGACTTTTAGGTTGGGCTAGGTGTTTACTCAGCGTTTG
**********************************************************************..((((....))))(((.....)))......(((((.((..((...((..((((.....))))..)).))..)).)))))....(((((((.((.......)))))))))..********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body
....................................................................................................................................................................................................CTTCTAGGGTTCCGTAACGAC.................................. 21 2 1 1.00 1 1 0
.....................................................................................................................................................................................................TTCTAGGGTTCCGTAACGACC................................. 21 3 3 0.33 1 1 0
.........................................................................................................................................TGCCACAGCCGACTGTACCA.............................................................................................. 20 3 5 0.20 1 0 1
..................................................................................................................................................................CGACGCACGCCCTTGGTTA...................................................................... 19 3 6 0.17 1 1 0
......................................................................................................................................................................GCACGCCCTCGGTTTCGCTT................................................................. 20 3 7 0.14 1 1 0
...........................................................................................................................................................................................................................TTAGATTGGGCTACGTGTTG............ 20 3 9 0.11 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004521:246859-247109 + dwi_1195 GCTTCT-CAATGAAAAAAGCGAAGACGACGATGGCAGCGGTATCAGTGGCGGTGGAGTTGGCGGCATTG---GCTCTGGCCATCCGGGAGTAGG---TCTCAATAATAGCCGGCAAAGTGAACTGATGCGTCAATTGCAAAAGGACGATGGCGGC---------TCACATGGT---------TCCATGATGCGTGCAG---------------------------------GAGCCAATGCCAATATGAGTAACGAAGATCTCAAGGCAATGCTGAAAATCCAACCCGATCCACAA---ATGAGTCGCAAAC
droVir3 scaffold_12963:647419-647663 + GCTGCT-AAACGAGAAGAGCGAAGAGGATGATGGCAGCAGT---GG------------------CACAG---GCCCGGGCGGCCC------CGGTGTCCTTAGCAATACGCGGCAGAGCGAGCTAATGCGTCAGCTGCAGAAGGATGACGGCGGC---------AACCATGGACCTGGCCACGGCATGCTGGGCGGCAGC------------------------GGTGCCAGCGGTGGCGGCAACATGAGCAACGAGGATCTCAAGCGCATGCTAAAAATCCAAAGCGATCCGGCC---ATGAGTCGCAAGC
droMoj3 scaffold_6500:12170974-12171221 + GCTGTT-GAACGAGAAGAGCGAAGAGGAGGATGGCAGCAGT---GG------------------CACAGGTGGTTCCGGTGGCTC------CGGCGTATTGAACAATGCGCGGCAAAGCGAACTGATGCGTCAGCTGCAGAAGGATGATGGCGGC---------AGCCATGGCAGCGGGCATGGCATGCTCGGCGGCAGC------------------------GGCGCCGGCGGTGGCGGCAATATGAGCAACGAGGATCTCAAACGCATGCTCAAAATCCAAAGTGATCCGGCG---ATGAGCCGCAAGC
droGri2 scaffold_15126:2964021-2964307 - GCTGCT-GAACGAGAAGAGCGAGGAGGATGATGGCAGCGGAGCGGGCG---GAACGGGTGCGGGCAGCG---GCACTGGCGGACC------TGGAATGCTGAACAATGTGCGGCAGAGCGAACTGATGCGTCAGCTGCAGAAGGACGATGGCGGC---------GGTCATGGCCATGGGCATGGCATGCTCGGCGGCGGCAGTGGTGGTGGCGGTGGCAGTGGTGGCGCTGGTGGCGGCGCCAACATGAGCAACGAGGATCTCAAACGCATGCTCAAAATCCAAAGTGATCCGGCA---ATGAGTCGCAAGC
dp5 4_group5:1559466-1559677 + GCTTCT-CAACGAGAAGACAGACGATGATGATG------------------------------------------------TGCC------GGGAGCCATGAGCAATGCCCGCCAGAGCGAACTGATGCGGCAGCTCAAGAACAACGACGGGGGCCATGGGTCCGGCCATGGG---------TCCATGCACCGAGTGG---------------------------------GCGCCGGCGGGAACATGAGCAACGAGGATCTCAAGGCCATGCTGAAGATCCAGAGCGATCCGTCG---CTGAGCCGCAAGC
droPer2 scaffold_40:199363-199445 - ATCACAACAGCCAGCAGGCGGGCGGCGGCGGTGGCGGTGGC---GG------TGGCGGCGGCGGGCCGA---GC---GGCGGTCC------TGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAATGAGT
droAna3 scaffold_12943:581781-581995 + GCTGCT-CAACGAAAAAACGGAGGACGATGATGGGAACGGATCTGG------------------------T------GGCGGTCC------TGGCTCCATGAACAACTCCCGGCAAAGCGAACTGATGCGCCAACTGAAGAACCCAGACGGTGGC---------AATCACG------------GGATGCACAGACCCA---------------------------------ATGCCGGCGGCAACATGAGCAACGAGGATCTCAAGGCCATGCTAAAGATTCAGGGTGATCC---T---CTGAGCCGCAAAC
droBip1 scf7180000396535:147208-147422 - GCTGCT-GAACGAAAAGACGGAGGACGAAGACGGTAACGGATCTGG------------------------T------GGCGGTCC------TGGCTCCATGAACAACTCCCGGCAGAGCGAACTGATGCGCCAACTGAAGAACCCTGATGGGGGT---------AGTCACG------------GGATGCACAGACCCA---------------------------------ATGCCAGCGGGAACATGAGCAACGAGGATCTTAAGGCCATGCTGAAGATCCAGAGCGATCC---G---CTGAGCCGCAAAC
droKik1 scf7180000302679:1112297-1112496 + GCTGCT-CAACGAGAAGACCGAGGACGACGACGGCAACGGT---GG------------------------C------GGTGGCTC------TGGCTCTATGAACAACTCCCGCCAGAGCGAGCTGATGCGACAGCTGAAGAATCCCGAC------------------------------------ATGCATCGGGGCA---------------------------------ATGCCGGCGGCAACATGAGCACCGAGGACCTCAAGGCCATGCTCAAGATCCAGAGCGATCCGTCG---CAGAGTCGCAAGC
droFic1 scf7180000453712:26178-26392 + GCTGCT-GAACGAGAAGTCCGAGGATGATGATGGCAACGGATCGGG------------------------C------GGCGGACC------CGGATCCATGAACAACTCCCGTCAGAGCGAGCTGATGCGCCAGCTGAAGAACCCCGACGGGGGC---------AACCACG------------GAATGCATCGCGGCA---------------------------------GCGCCAGCGGGAACATGAGCACCGAGGACCTGAAGGCCATGCTGAAGATCCAAAGCGATCC---G---CTCAGTCGGAAGC
droEle1 scf7180000491186:2174643-2174863 + GCTGCT-GAACGAGAAGTCGGAGGAGGATGATGGCAACGGATCGGG------------------------C------GGTGGACC------GGGTTCGATGAACAACTCCCGCCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCCGACGGCGGT---------GGTCATG------------GCATGCATCGTGGCA---------------------------------GTGCCGGCGGCAACATGAGCACCGAGGATCTGAAGGCCATGCTCAAGATTCAAAGCGATCCGTCGCTGCTGAGTCGCAAGC
droRho1 scf7180000778060:41194-41408 - GCTGCT-CAACGAAAAGTCCGAGGAGGATGATGGCAACGGATCGGG------------------------T------GGTGGACC------GGGTTCCATGAACAACTCCCGCCAGAGTGAGCTGATGCGCCAGTTGAAAAATCCGGACGGAGGC---------GGCCATG------------GTATGCACCGTGGCA---------------------------------ATGCCGGTGGCAACATGAGCACCGAGGATCTGAAGGCCATGCTCAAGATCCAGAGCGATCC---G---CTGAGTCGCAAGC
droBia1 scf7180000302408:3974774-3974988 - GCTCCT-CAATGAGAAGTCGGAGGACGATGATGGT---GGATCGGG------------------------A------GATGGTCC------AGGTTCCATGAACAACTCCCGACAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGACGGAGGT---------GGCCATG------------GCATGCATCGTGGCA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGCTCTAAAGGCGATGCTCAAGATCCAGAGCGATCCGTCG---CTGAGCCGCAAGC
droTak1 scf7180000415702:278189-278406 - GCTACT-CAACGAAAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGCGGACC------GGGCTCCATGAACAACTCCCGCCAGAGCGAACTGATGCGCCAGCTGAAGAATCCCGACGGCGGT---------GGCCATGGT---------GGCATGCATCGCGGCA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGACCTGAAGGCCATGTTGAAGATCCAGAGCGATCC---G---CTGAGCCGCAAGC
droEug1 scf7180000409554:227156-227373 - GCTACT-CAACGAAAAGTCCGAGGATGATGATGGAAATGGATCTGG------------------------T------GGTGGTCC------TGGTTCTATGAACAACTCGCGCCAGAGCGAGCTAATGCGGCAGCTAAAGAATCCAGATGGAGGT---------AGCCACG------------GGATGCATCGTGGCA---------------------------------ATGCTAGCGGTAATATGAGTAACGAGGATCTGAAGGCCATGCTCAAGATCCAGAGCGATCCTTCG---CAGAGTCGCAAGC
dm3 chr2L:9241605-9241822 + GCTACT-AAACGAAAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCTATGAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGACGGTGGC---------AGCCATG------------GCATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGTACCGAGGATCTAAAGGCCATGCTCAAAATCCAAAGCGATCCATCG---CTGAACAGAAAGC
droSim2 2l:8934335-8934552 + GCTACT-CAACGAGAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCTATGAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGATGGTGGC---------AGCCATG------------GCATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCCATGCTCAAAATCCAAAGCGATCCATCG---CTGAACAGAAAGC
droSec2 scaffold_3:4700570-4700787 + GCTACT-CAACGAGAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCTATGAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGATGGTGGC---------AGCCATG------------GCATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCCATGCTCAAAATCCAAAGCGATCCATCG---CTGAACAGAAAGC
droYak3 2L:11908795-11909012 + GCTACT-CAACGAGAAGTCCGAGGACGATGAGGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCAATAAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTAAAGAATCCGGACGGTGGC---------AGCCACG------------GGATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCGATGCTCAAGATCCAAAGCGATCCATCG---CTGAGCCGAAAGC
droEre2 scaffold_4929:9847175-9847392 + GCTACT-CAACGAGAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------C------GGTGGGCC------AGGTTCTATGAACAACTCGCGGCAGAGCGAGCTGATGCGCCAGCTAAAGAATCCGGACGGTGGC---------AGCCACG------------GGATGCACCGCAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCCATGCTCAAGATCCAAAGCGATCCCTCG---CTGAATCGAAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GCTTCT-CAATGAAAAAAGCGAAGACGACGATGGCAGCGGTATCAGTGGCGGTGGAGTTGGCGGCATTG---GCTCTGGCCATCCGGGAGTAGG---TCTCAATAATAGCCGGCAAAGTGAACTGATGCGTCAATTGCAAAAGGACGATGGCGGC---------TCACATGGT---------TCCATGATGCGTGCAG---------------------------------GAGCCAATGCCAATATGAGTAACGAAGATCTCAAGGCAATGCTGAAAATCCAACCCGATCCACAA---ATGAGTCGCAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................CATGATGCGTGCAG---------------------------------GAGCCAAT.........................................................................2213.00300120
.........................................................................................................................................................................................................................................................GTAACGAAGATCTCAAGGC............................................1913.00330000
...........GAAAAAAGCGAAGACGACGAT........................................................................................................................................................................................................................................................................................2112.00200200
.........................................ATCAGTGGCGGTGGAGTTGGC..........................................................................................................................................................................................................................................................2112.00200110
............................................................................................................................................................................................................................................AATGCCAATATGAGTAACGAAG......................................................2212.00201100
........................................................................................................................................................................ATGGT---------TCCATGATGCGTGCAG---------------------------------GA...............................................................................2311.00100100
....................................................................................................................................................................TCACATGGT---------TCCATGATGCGTGCAG---------------------------------GA...............................................................................2711.00100100
.........................................................................CTCTGGCCATCCGGGAGTAGG---T......................................................................................................................................................................................................................2211.00100010
...................................................................................................................................CAATTGCAAAAGGACGATGGCGGC---------T...................................................................................................................................................2511.00100010
....................................................................................................................................AATTGCAAAAGGACGATGGCGGC---------TC..................................................................................................................................................2511.00110000
........................................................................................................................................................................................CATGATGCGTGCAG---------------------------------GAGCCAATGC.......................................................................2411.00100010
.........................................................................................................................................................................................................................................................GTAACGAAGATCTCAAGGCAATGC.......................................2411.00100010
...................................................................................................................................................ATGGCGGC---------TCACATGGT---------T.................................................................................................................................1811.00101000
.....................................................................................................................GTGAACTGATGCGTCAATTGCAAAAGG........................................................................................................................................................................2711.00100010
.........................................................................................................................................................................................................................................................GTAACGAAGATCTCAAGGCAATGCT......................................2511.00101000
......................AGACGACGATGGCAGCGGTATCAGT.........................................................................................................................................................................................................................................................................2511.00101000
.......................................................................................................................................................................................CCATGATGCGTGCAG---------------------------------GAGCCAAT.........................................................................2311.00100010
..........................GACGATGGCAGCGGTATCAGT.........................................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................GTGAACTGATGCGTCAAT.................................................................................................................................................................................1811.00110000
.........................................................................................................................................................................................ATGATGCGTGCAG---------------------------------GAGCCAAT.........................................................................2111.00100100
..........................................................................................................TAGCCGGCAAAGTGAACTGATGC.......................................................................................................................................................................................2311.00100010
...............................................................................................................GGCAAAGTGAACTGATGCGT.....................................................................................................................................................................................2011.00100100
....................GAAGACGACGATGGCAGCGGT...............................................................................................................................................................................................................................................................................2111.00100100
.........................................................................................................................................................................TGGT---------TCCATGATGCGTGCA...................................................................................................................1911.00100010
....................................................TGGAGTTGGCGGCATTG---GCTC............................................................................................................................................................................................................................................2111.00100010
......................AGACGACGATGGCAGCGGT...............................................................................................................................................................................................................................................................................1911.00100010
droVir3
GCTGCT-AAACGAGAAGAGCGAAGAGGATGATGGCAGCAGT---GG------------------CACAG---GCCCGGGCGGCCC------CGGTGTCCTTAGCAATACGCGGCAGAGCGAGCTAATGCGTCAGCTGCAGAAGGATGACGGCGGC---------AACCATGGACCTGGCCACGGCATGCTGGGCGGCAGC------------------------GGTGCCAGCGGTGGCGGCAACATGAGCAACGAGGATCTCAAGCGCATGCTAAAAATCCAAAGCGATCCGGCC---ATGAGTCGCAAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................GCAACGAGGATCTCAAGCGCATGCT......................................2512.002001000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................GCAGAAGGATGACGGCGGC---------AAC.................................................................................................................................................2212.002200000000000000000000000000000000000000000000000000000000000000
.............GAAGAGCGAAGAGGATGATGGCA....................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................TTAGCAATACGCGGCAGAGCGAGCT............................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CAGCGGTGGCGGCAACATGA...............................................................2011.001000000000001000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATGGACCTGGCCACGGCATGCTGGGCGG....................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GCTGCAGAAGGATGACGGCGGC---------AACC................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GCATGCTAAAAATCCAAAGC.........................2011.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CGCATGCTAAAAATCCAAAGCGATCCGG..................2811.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................GCAACGAGGATCTCAAGC.............................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................GATGGCAGCAGT---GG------------------CACAG---GCCCGGG.........................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................GTCCTTAGCAATACGCGGC......................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................AGAAGGATGACGGCGGC---------AACC................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CTCAAGCGCATGCTAAAAATCCAAAGC.........................2711.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCAGAAGGATGACGGCGGC---------A...................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
...................CGAAGAGGATGATGGCAGCAGT---G...........................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATCCAAAGCGATCCGGC.................1711.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................CGATCCGGCC---ATGAGTCGCAAGC2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATGGACCTGGCCACGGCATGC...........................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CAGAAGGATGACGGCGGC---------AACC................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AACATGAGCAACGAGGATCTCAAGCGC...........................................2711.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................ATGGACCTGGCCACGGCATGCT..........................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................GC---------AACCATGGACCTGGCC....................................................................................................................................1811.001000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................GCAGAAGGATGACGGCGGC---------....................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATACGCGGCAGAGCGAGCTAATGC.......................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................CGCGGCAGAGCGAGCTAA..........................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TGCAGAAGGATGACGGCGGC---------AACC................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCTGTT-GAACGAGAAGAGCGAAGAGGAGGATGGCAGCAGT---GG------------------CACAGGTGGTTCCGGTGGCTC------CGGCGTATTGAACAATGCGCGGCAAAGCGAACTGATGCGTCAGCTGCAGAAGGATGATGGCGGC---------AGCCATGGCAGCGGGCATGGCATGCTCGGCGGCAGC------------------------GGCGCCGGCGGTGGCGGCAATATGAGCAACGAGGATCTCAAACGCATGCTCAAAATCCAAAGTGATCCGGCG---ATGAGCCGCAAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................GGCATGCTCGGCGGCAGC------------------------GGCGCCGGC...............................................................................2711.001000001
.........................................................................................................................................................................................................................................GGTGGCGGCAATATGAGCAACGAGG......................................................2511.001000001
.....................................................................................................................................GCTGCAGAAGGATGATGGC................................................................................................................................................................1911.001100000
..........CGAGAAGAGCGAAGAGGAGGA.........................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................CTCAAACGCATGCTCAAAAT................................2011.001100000
.............................GATGGCAGCAGT---GG------------------CACAGGTGGTTC............................................................................................................................................................................................................................................2611.001000001
.............GAAGAGCGAAGAGGAGGATGG......................................................................................................................................................................................................................................................................................2111.001000010
...............................................................................................................GGCAAAGCGAACTGATGC.......................................................................................................................................................................................1811.001100000
.............................................................................................................................................................................................TCGGCGGCAGC------------------------GGCGCCGGCGGTG...........................................................................2411.001000010
...........................................................................................................GCGCGGCAAAGCGAACTGATGC.......................................................................................................................................................................................2211.001100000
droGri2
GCTGCT-GAACGAGAAGAGCGAGGAGGATGATGGCAGCGGAGCGGGCG---GAACGGGTGCGGGCAGCG---GCACTGGCGGACC------TGGAATGCTGAACAATGTGCGGCAGAGCGAACTGATGCGTCAGCTGCAGAAGGACGATGGCGGC---------GGTCATGGCCATGGGCATGGCATGCTCGGCGGCGGCAGTGGTGGTGGCGGTGGCAGTGGTGGCGCTGGTGGCGGCGCCAACATGAGCAACGAGGATCTCAAACGCATGCTCAAAATCCAAAGTGATCCGGCA---ATGAGTCGCAAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................AAACGCATGCTCAAAATCCA.............................2011.00110
.........................................................................................................ATGTGCGGCAGAGCGAACT............................................................................................................................................................................................1911.00110
...............................TGGCAGCGGAGCGGGCG---GA...................................................................................................................................................................................................................................................................1911.00110
.............GAAGAGCGAGGAGGATGATG.......................................................................................................................................................................................................................................................................................2011.00110
............................................................................................................................................................................................................GTGGTGGCGGTGGCAGTGGTG.......................................................................................2111.00110
....................................................................................................................AGCGAACTGATGCGTCAGCT................................................................................................................................................................................2011.00101
........................................................................................................AATGTGCGGCAGAGCGAACT............................................................................................................................................................................................2011.00101
.......GAACGAGAAGAGCGAGGAGGATGATG.......................................................................................................................................................................................................................................................................................2611.00101
............................................................................................................................................................................................................GTGGTGGCGGTGGCAGTG..........................................................................................1820.50101
dp5
GCTTCT-CAACGAGAAGACAGACGATGATGATG------------------------------------------------TGCC------GGGAGCCATGAGCAATGCCCGCCAGAGCGAACTGATGCGGCAGCTCAAGAACAACGACGGGGGCCATGGGTCCGGCCATGGG---------TCCATGCACCGAGTGG---------------------------------GCGCCGGCGGGAACATGAGCAACGAGGATCTCAAGGCCATGCTGAAGATCCAGAGCGATCCGTCG---CTGAGCCGCAAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................GAACATGAGCAACGAGGAT....................................................1913.0030200001000
...............AGACAGACGATGATGATG------------------------------------------------TGCC------GGG..........................................................................................................................................................................................................................2512.0020200000000
........................................................................................................................................CAAGAACAACGACGGGGGCCATG.........................................................................................................................................................2311.0010000000001
...........................................................................................................................................GAACAACGACGGGGGCCATGGGTC.....................................................................................................................................................2411.0010010000000
.......................................................................................................................................................................................................................................................................................TCCAGAGCGATCCGTCG---CTGAGC.......2311.0010000001000
.................................................................................................................................................................................................AGTGG---------------------------------GCGCCGGCGGGAACA..................................................................2011.0010100000000
................................................................................................................................................................................................................................................GGAACATGAGCAACGAGGA.....................................................1911.0010100000000
............................................................................................................................................................................................................................................................................CATGCTGAAGATCCAGAGC.........................1911.0010100000000
...............................................................................................................................................................................................................................................................................................GATCCGTCG---CTGAGCCGCAA..2011.0010100000000
....................................................................................................................................AGCTCAAGAACAACGACGGG................................................................................................................................................................2011.0010100000000
................................................................................................................................................................GTCCGGCCATGGG---------TCCATGCACCG.......................................................................................................................2411.0010100000000
...............................................................................................................................................AACGACGGGGGCCATGGGTCCGGCCAT..............................................................................................................................................2711.0010001000000
....................................................................................................................................................................................................................................................................CTCAAGGCCATGCTGAAGATCCAGAGC.........................2711.0010000100000
..............................................................................................................CGCCAGAGCGAACTGATGCGGCAGCT................................................................................................................................................................................2611.0010100000000
...TCT-CAACGAGAAGACAGACGATGATG..........................................................................................................................................................................................................................................................................................2611.0010000100000
......................CGATGATGATG------------------------------------------------TGCC------GGGAGCCA.....................................................................................................................................................................................................................2311.0010000100000
....................................................................................................................................................................................................................................................................CTCAAGGCCATGCTGAAGATCC..............................2211.0010100000000
....................................................................................................................................................................................................................................................................CTCAAGGCCATGCTGAAGATCCAG............................2411.0010100000000
............................TGATG------------------------------------------------TGCC------GGGAGCCATG...................................................................................................................................................................................................................1911.0010000010000
.............................................................................................................................................ACAACGACGGGGGCCATGGGTCCGGC.................................................................................................................................................2611.0010100000000
........................................................................................................................................CAAGAACAACGACGGGGGCCATGG........................................................................................................................................................2411.0010000001000
...TCT-CAACGAGAAGACAGACGATGA............................................................................................................................................................................................................................................................................................2411.0010000000100
...........................................................................................................................................................................................GCACCGAGTGG---------------------------------GCGCCGGC.........................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................CTCAAGGCCATGCTGAAGA.................................1920.5010000001000
droPer2
ATCACAACAGCCAGCAGGCGGGCGGCGGCGGTGGCGGTGGC---GG------TGGCGGCGGCGGGCCGA---GC---GGCGGTCC------TGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAATGAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................GGTGGCGGTGGC---GG------TGGCGGCGGC..........................................................................................................................................................................................................................................................24140.142000002
.......................GGCGGCGGTGGCGGTGGC---GG------TGGC................................................................................................................................................................................................................................................................24150.071010000
.....................GCGGCGGCGGTGGCGGTGGC---............................................................................................................................................................................................................................................................................20200.051010000
droAna3
GCTGCT-CAACGAAAAAACGGAGGACGATGATGGGAACGGATCTGG------------------------T------GGCGGTCC------TGGCTCCATGAACAACTCCCGGCAAAGCGAACTGATGCGCCAACTGAAGAACCCAGACGGTGGC---------AATCACG------------GGATGCACAGACCCA---------------------------------ATGCCGGCGGCAACATGAGCAACGAGGATCTCAAGGCCATGCTAAAGATTCAGGGTGATCC---T---CTGAGCCGCAAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................GACGGTGGC---------AATCACG------------GGATGCACA........................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................AAGGCCATGCTAAAGATTCAGGGTGAT......................2711.001100000
.............................GATGGGAACGGATCTGG------------------------T------GGCGGT.....................................................................................................................................................................................................................................2411.001010000
............................................................................................................................................................................................................................................................................CATGCTAAAGATTCAGGGT.........................1911.001000010
....................................................................................................................................................................AATCACG------------GGATGCACAGACCCA---------------------------------ATGCC............................................................................2711.001100000
..........................................................................................................................................................................................................................................................CAACGAGGATCTCAAGGCC...........................................1911.001000001
............................................................................................................................................................................................................................................GGCGGCAACATGAGCAACGAG.......................................................2111.001000010
............................................................................................................................................................................................................................................GGCGGCAACATGAGCAACGAGG......................................................2211.001100000
........................................................................................................................................................................................GATGCACAGACCCA---------------------------------ATGCC............................................................................1911.001100000
.........................................TCTGG------------------------T------GGCGGTCC------TGGCTCC......................................................................................................................................................................................................................2111.001010000
.............AAAAACGGAGGACGATGATGGG.....................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................GCGCCAACTGAAGAACCCAGACGGTG...............................................................................................................................................................2611.001100000
...................................AACGGATCTGG------------------------T------GGCGGTCC------TGGCT........................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................GCAACGAGGATCTCAAGGCC...........................................2011.001010000
..........................................................................................................................................................................................................................................................CAACGAGGATCTCAAGGCCATGCTAAA...................................2711.001010000
droBip1
GCTGCT-GAACGAAAAGACGGAGGACGAAGACGGTAACGGATCTGG------------------------T------GGCGGTCC------TGGCTCCATGAACAACTCCCGGCAGAGCGAACTGATGCGCCAACTGAAGAACCCTGATGGGGGT---------AGTCACG------------GGATGCACAGACCCA---------------------------------ATGCCAGCGGGAACATGAGCAACGAGGATCTTAAGGCCATGCTGAAGATCCAGAGCGATCC---G---CTGAGCCGCAAACSizeHit CountTotal NormTotal
No Reads
droKik1
GCTGCT-CAACGAGAAGACCGAGGACGACGACGGCAACGGT---GG------------------------C------GGTGGCTC------TGGCTCTATGAACAACTCCCGCCAGAGCGAGCTGATGCGACAGCTGAAGAATCCCGAC------------------------------------ATGCATCGGGGCA---------------------------------ATGCCGGCGGCAACATGAGCACCGAGGACCTCAAGGCCATGCTCAAGATCCAGAGCGATCCGTCG---CAGAGTCGCAAGCSizeHit CountTotal NormTotal
No Reads
droFic1
GCTGCT-GAACGAGAAGTCCGAGGATGATGATGGCAACGGATCGGG------------------------C------GGCGGACC------CGGATCCATGAACAACTCCCGTCAGAGCGAGCTGATGCGCCAGCTGAAGAACCCCGACGGGGGC---------AACCACG------------GAATGCATCGCGGCA---------------------------------GCGCCAGCGGGAACATGAGCACCGAGGACCTGAAGGCCATGCTGAAGATCCAAAGCGATCC---G---CTCAGTCGGAAGCSizeHit CountTotal NormTotal
No Reads
droEle1
GCTGCT-GAACGAGAAGTCGGAGGAGGATGATGGCAACGGATCGGG------------------------C------GGTGGACC------GGGTTCGATGAACAACTCCCGCCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCCGACGGCGGT---------GGTCATG------------GCATGCATCGTGGCA---------------------------------GTGCCGGCGGCAACATGAGCACCGAGGATCTGAAGGCCATGCTCAAGATTCAAAGCGATCCGTCGCTGCTGAGTCGCAAGCSizeHit CountTotal NormTotal
No Reads
droRho1
GCTGCT-CAACGAAAAGTCCGAGGAGGATGATGGCAACGGATCGGG------------------------T------GGTGGACC------GGGTTCCATGAACAACTCCCGCCAGAGTGAGCTGATGCGCCAGTTGAAAAATCCGGACGGAGGC---------GGCCATG------------GTATGCACCGTGGCA---------------------------------ATGCCGGTGGCAACATGAGCACCGAGGATCTGAAGGCCATGCTCAAGATCCAGAGCGATCC---G---CTGAGTCGCAAGCSizeHit CountTotal NormTotal
No Reads
droBia1
GCTCCT-CAATGAGAAGTCGGAGGACGATGATGGT---GGATCGGG------------------------A------GATGGTCC------AGGTTCCATGAACAACTCCCGACAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGACGGAGGT---------GGCCATG------------GCATGCATCGTGGCA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGCTCTAAAGGCGATGCTCAAGATCCAGAGCGATCCGTCG---CTGAGCCGCAAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GCTACT-CAACGAAAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGCGGACC------GGGCTCCATGAACAACTCCCGCCAGAGCGAACTGATGCGCCAGCTGAAGAATCCCGACGGCGGT---------GGCCATGGT---------GGCATGCATCGCGGCA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGACCTGAAGGCCATGTTGAAGATCCAGAGCGATCC---G---CTGAGCCGCAAGCSizeHit CountTotal NormTotal
No Reads
droEug1
GCTACT-CAACGAAAAGTCCGAGGATGATGATGGAAATGGATCTGG------------------------T------GGTGGTCC------TGGTTCTATGAACAACTCGCGCCAGAGCGAGCTAATGCGGCAGCTAAAGAATCCAGATGGAGGT---------AGCCACG------------GGATGCATCGTGGCA---------------------------------ATGCTAGCGGTAATATGAGTAACGAGGATCTGAAGGCCATGCTCAAGATCCAGAGCGATCCTTCG---CAGAGTCGCAAGCSizeHit CountTotal NormTotal
No Reads
dm3
GCTACT-AAACGAAAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCTATGAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGACGGTGGC---------AGCCATG------------GCATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGTACCGAGGATCTAAAGGCCATGCTCAAAATCCAAAGCGATCCATCG---CTGAACAGAAAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................ATCCGGACGGTGGC---------AGCCATG------------.................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................ACTCCCGGCAGAGCGAGCTGATGCGC.....................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.....T-AAACGAAAAGTCCGAGGACGATGA.........................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CGAGGATCTAAAGGCCATGCTCA....................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATCCGGACGGTGGC---------AGCCATG------------GCA..............................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TATGAACAACTCCCGGCAGAGCGAGC.............................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................GATCGGG------------------------T------GGTGGGCC------AGGTT........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACCGAGGATCTAAAGGCCATGCTC.....................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGAGGACGATGATGGCAAC..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
................................GGCAACGGATCGGG------------------------T------GGTGGGCC------.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................CAACGGATCGGG------------------------T------GGTGT......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAGGCCATGCTCAAAATC...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACATGAGTACCGAGGATCTAAAGGCCA..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AGCTGAAGAATCCGGACGGTGG..............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGAGTACCGAGGATCTAAAGG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TACCGAGGATCTAAAGGCCATGCT......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GCAGAGCGAGCTGATGCGCCAGCTGAA.............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGTTCTATGAACAACTCCCGGCA.....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AACTCCCGGCAGAGCGAGCTGATGCGCC....................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGCCAGCGGCAACATGAGT.............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GATGCGCCAGCTGAAGAAT.........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGTCCGAGGACGATGATGGCAACGGC...............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTCCGAGGACGATGATGGC.....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACGGATCGGG------------------------T------GGTGGGCC------AGG..........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................GGACGATGATGGCAACGGATCGGG------------------------T------...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACT-AAACGAAAAGTCCGAGGACGATGAT........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GAAGAATCCGGACGGTGGC---------....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................CGGACGGTGGC---------AGCCATG------------GCATG............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGGACGATGATGGCAACGGC...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.................................................................................................TATGAACAACTCCCGGCAGAGCGAGCTG...........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACGATGATGGCAACGGATCGG...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGAGCGAGCTGATGCGCCAGCTGAAG............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................GAGGATCTAAAGGCCATGCTC.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................GATGCGCCAGCTGAAGAATCCGGACG..................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................GAAGAATCCGGACGGTGGC---------AGCC................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GCTGATGCGCCAGCTGAAGAATCCGGA....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CCATCG---CTGAACAGAAAGC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GCCAGCGGCAACATGAGTACCGAGG......................................................2511.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AACTCCCGGCAGAGCGAGCT............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TGCGCCAGCTGAAGAATCCGGACGG.................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................GGCAACATGAGTACCGAGGATCTAAA...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TCCGGACGGTGGC---------AGCCATG------------GCATG............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGCTGATGCGCCAGCTGAA.............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GAATCCGGACGGTGGC---------AGCCAT..............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................CCGGACGGTGGC---------AGCCATG------------G................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AACTCCCGGCAGAGCGAGC.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCTACT-AAACGAAAAGTCCGAGGACGAT...........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TATGAACAACTCCCGGCAGAGCGAGCT............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGAGTACCGAGGATCTAAAGGCCA..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TACT-AAACGAAAAGTCCGAGGACGATG..........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................ATGAACAACTCCCGGCAGA...................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GTACCGAGGATCTAAAGGCCAT.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................AGCGGCAACATGAGTACCGAGGATC...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......AAACGAAAAGTCCGAGGACGAT...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGTCCGAGGACGATGATGGC.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACGGATCGGG------------------------T------GGTGT......................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAAAAGTCCGAGGACGAT...........................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACGGATCGGG------------------------T------GGTA.......................................................................................................................................................................................................................................1530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCTACT-CAACGAGAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCTATGAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGATGGTGGC---------AGCCATG------------GCATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCCATGCTCAAAATCCAAAGCGATCCATCG---CTGAACAGAAAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........AACGAGAAGTCCGAGGAC..............................................................................................................................................................................................................................................................................................1811.00100100000000000000
..........................................................................................................................................................................................................................................................CACCGAGGATCTAAAGGCC...........................................1911.00101000000000000000
......................................................................................................ACAACTCCCGGCAGAGCGAGCT............................................................................................................................................................................................2211.00100000000001000000
...............................................................................................TCTATGAACAACTCCCGGCAGA...................................................................................................................................................................................................2211.00100010000000000000
....................................................................................................................................................................AGCCATG------------GCATGCACCGTAA....................................................................................................................2011.00100000000000100000
...................................................................................................................................................................................................................................................................................AAAATCCAAAGCGATCCATCG---.............2111.00100000000000100000
.........................................................................................................................................................................................ATGCACCGTAACA---------------------------------GTGCCAGCGGC......................................................................2411.00101000000000000000
...........GAGAAGTCCGAGGACGATGATGGC.....................................................................................................................................................................................................................................................................................2411.00101000000000000000
...........................................................................................................................................................................................................................................CAGCGGCAACATGAGCACCGAGGATC...................................................2611.00100100000000000000
....................................ACGGATCGGG------------------------T------GGTGT......................................................................................................................................................................................................................................1620.50100000000001000000
droSec2
GCTACT-CAACGAGAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCTATGAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTGAAGAATCCGGATGGTGGC---------AGCCATG------------GCATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCCATGCTCAAAATCCAAAGCGATCCATCG---CTGAACAGAAAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................ACAACTCCCGGCAGAGCGAGCT............................................................................................................................................................................................2211.0010010
.............................GATGGCAACGGATCGGG------------------------T------...........................................................................................................................................................................................................................................1811.0010010
................................GGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTT........................................................................................................................................................................................................................2811.0010100
................................................................................................CTATGAACAACTCCCGGCAGAGCGAGC.............................................................................................................................................................................................2711.0011000
.........................................................................................................................................................................................ATGCACCGTAACA---------------------------------GTGCCAGCGGC......................................................................2411.0010010
..............AAGTCCGAGGACGATGATGGCAACGGAT..............................................................................................................................................................................................................................................................................2811.0010010
...............AGTCCGAGGACGATGATGGCAACG.................................................................................................................................................................................................................................................................................2411.0011000
......................................................................................................................................................................................................................................................TGAGCACCGAGGATCTAAAG..............................................2011.0010010
...................................................................................................................................................................................................................................................ACATGAGCACCGAGGATCTAAAGGC............................................2511.0010010
.......................................................................................................................................................................................................................................GTGCCAGCGGCAACATGAGC.............................................................2011.0010010
..........................GATGATGGCAACGGATCGGG------------------------T------GGTGG......................................................................................................................................................................................................................................2611.0010100
.........................................................................................................................................................................................ATGCACCGTAACA---------------------------------GTGCCAGCGGCAAC...................................................................2711.0010010
....................................................................................................GAACAACTCCCGGCAGAGC.................................................................................................................................................................................................1911.0010010
........................................................................................................AACTCCCGGCAGAGCGAGCTGATGCGCCA...................................................................................................................................................................................2911.0010100
..............................................................................................................................................................................................................................................CGGCAACATGAGCACCGAGGAT....................................................2211.0010100
...............................................................................................................................................................................................................................................................................GCTCAAAATCCAAAGCGATCC....................2111.0010100
...........................................................................................................................TGATGCGCCAGCTGAAGAATC........................................................................................................................................................................2111.0010010
............................................................................................................................GATGCGCCAGCTGAAGAATCC.......................................................................................................................................................................2111.0010010
droYak3
GCTACT-CAACGAGAAGTCCGAGGACGATGAGGGCAACGGATCGGG------------------------T------GGTGGGCC------AGGTTCAATAAACAACTCCCGGCAGAGCGAGCTGATGCGCCAGCTAAAGAATCCGGACGGTGGC---------AGCCACG------------GGATGCACCGTAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCGATGCTCAAGATCCAAAGCGATCCATCG---CTGAGCCGAAAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................CTAAAGGCGATGCTCAAGATCCAAAGC.........................2713.00302100000000
..........................................................................................................CTCCCGGCAGAGCGAGCTGATGC.......................................................................................................................................................................................2312.00200200000000
..........................................................................................................................................................................................................................................................CACCGAGGATCTAAAGGCGAT.........................................2111.00100000010000
.........................................................................................................................................................................................................................................................................GGCGATGCTCAAGATCCAAAGC.........................2211.00100100000000
..................................................................................................................................................................................................................................................................ATCTAAAGGCGATGCTCAAG..................................2011.00101000000000
.......CAACGAGAAGTCCGAGGACGATGAGG.......................................................................................................................................................................................................................................................................................2611.00100000100000
.................................................................................................................................................GGACGGTGGC---------AGCCACG------------GGATGCAC.........................................................................................................................2511.00101000000000
......................GGACGATGAGGGCAACGGATCGGG------------------------T------...........................................................................................................................................................................................................................................2511.00101000000000
.........................................................................................................................................................................................................................................GCCAGCGGCAACATGAGCACCGAGG......................................................2511.00100000010000
....CT-CAACGAGAAGTCCGAGGACGATGAGGG......................................................................................................................................................................................................................................................................................2911.00100000010000
..........................GATGAGGGCAACGGATCGGG------------------------T------GGT........................................................................................................................................................................................................................................2411.00100000010000
....................................ACGGATCGGG------------------------T------GGTGGGCC------AGGT.........................................................................................................................................................................................................................2311.00100010000000
..........................................................................................................................................................................................................................................................................................AAAGCGATCCATCG---CTGAGCC......2111.00100000100000
..........................................................................................................................................................................................................................................................................GCGATGCTCAAGATCCAAAGC.........................2111.00100100000000
.................................................................................................................................................................................................................................................CAACATGAGCACCGAGGATCTAAAGGC............................................2711.00100000010000
................................................................................................................................................................................................................................................................................................ATCCATCG---CTGAGCCGAAAGC2111.00100000010000
.........................................................................................................................GCTGATGCGCCAGCTAAAGAATCCGGAC...................................................................................................................................................................2811.00110000000000
...............................................................................................................................................................................................................................................................................GCTCAAGATCCAAAGCGATCC....................2111.00100000010000
....................................ACGGATCGGG------------------------T------GGTGT......................................................................................................................................................................................................................................1630.33100000100000
...................................AACGGATCGGG------------------------T------GGTGTT.....................................................................................................................................................................................................................................1870.14100000100000
droEre2
GCTACT-CAACGAGAAGTCCGAGGACGATGATGGCAACGGATCGGG------------------------C------GGTGGGCC------AGGTTCTATGAACAACTCGCGGCAGAGCGAGCTGATGCGCCAGCTAAAGAATCCGGACGGTGGC---------AGCCACG------------GGATGCACCGCAACA---------------------------------GTGCCAGCGGCAACATGAGCACCGAGGATCTAAAGGCCATGCTCAAGATCCAAAGCGATCCCTCG---CTGAATCGAAAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................GGCAACGGATCGGG------------------------C------GGT........................................................................................................................................................................................................................................1811.0011000000
....................................................................................................................................................................................................................................................................CTAAAGGCCATGCTCAAGATCCAAAGC.........................2711.0010100000
.................................................................................................................................GCCAGCTAAAGAATCCGGACGGT................................................................................................................................................................2311.0010000100
......................GGACGATGATGGCAACGGATCGGG------------------------C------...........................................................................................................................................................................................................................................2511.0011000000
...........GAGAAGTCCGAGGACGATGATGGC.....................................................................................................................................................................................................................................................................................2411.0010000100
......................................................................................................................................CTAAAGAATCCGGACGGTGGC---------....................................................................................................................................................2111.0010000100
............................................................................................................CGCGGCAGAGCGAGCTGAT.........................................................................................................................................................................................1911.0010000010
..........CGAGAAGTCCGAGGACGATGATG.......................................................................................................................................................................................................................................................................................2311.0010000100

Generated: 05/18/2015 at 12:52 AM