ID:

dwi_1120

 Coordinate:

scf2_1100000004515:4381846-4381996 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.3 -20.5 -20.3

Flybase annnotation

CDS [Dwil\GK20141-cds]; exon [dwil_GLEANR_2730:3]; intron [Dwil\GK20141-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCGCCGTGATGCGCGCGAGGGCTCCCATGACAGTCATGCCCCGTCCGAATCGAGTCGCATTAGCTCGACGACGGTGACACGCCATGCCGCGCCAGCCAGCCACGTTACCACCACCAGCACCACCAAAAGTGTGGGTAAAAACGTTGTTACCAAGCAGCAGCAGCAGCATCACACTGTTGTGAAATCCCGTAATGTGCAAGGTTCTAACGAAACAATTGATCTTATGCCGCAGCGTTTGCAAAAATCCCCG
**********************************************************************.....((........(((.((.......(((.(((((......(((.((((........)))).)))...))))).))).....)).)))....))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V118
embryo
 V119
head
 M020
head
......................................................................GACGGTGACACGCCATGCC.................................................................................................................................................................. 19 0 1 2.00 2 0 2 0 0 0
.......................................................................................................................................................................................................................ATTGATCTTATGCCGCAGCGTTTCCA.......... 26 1 1 1.00 1 1 0 0 0 0
........................................................CGCATTAGCTCGACGACGGT............................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................GTTACCAAGCAGCAGCAGCA..................................................................................... 20 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................GTAATGTGCAAGGTTCTAACGAAACA.................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................CATTAGCTCGACGACGGTGACACGC........................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.....CGTGATGCGCGCGAGGGC.................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0
..............................................................................................................................AAAGGGTGGGTAAAAACGTTG........................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
....................................ATGCCCCGTCCGAATCGAGT................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................GCATCACACTGTTGTGAAATCCCGT............................................................ 25 0 1 1.00 1 0 1 0 0 0
........GATGCGCGCGAGGGCTCCC................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................AGCAGCAGCAGCATCACACT........................................................................... 20 0 1 1.00 1 0 1 0 0 0
...........................................................ATTAGCTCGACGACGGTGA............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................ACTGTTGTGAAATCCCGTAATGTGC..................................................... 25 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................ATCTTATGCCGCAGCGTTTGCAAA........ 24 0 1 1.00 1 0 0 1 0 0
.............GCGCGAGGGCTCCCATGACAGT........................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................GTTACCAAGCAGCAGCAGCAGC................................................................................... 22 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................ACCAAGCAGCAGCAGCAGCAT................................................................................. 21 0 1 1.00 1 0 0 1 0 0
......................................................................................................................................................CCAAGCAGCAGCAGCAGCATCACACT........................................................................... 26 0 1 1.00 1 0 0 1 0 0
......................................................GTCGCATTAGCTCGACGACGGTGA............................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................................CTTATGCCGCAGCGTTTGCA.......... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................AAAAACGTTGTTACCAAGCAGCAGCA........................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................TGATCTTATGCCGCAGCGTTTGCAA......... 25 0 1 1.00 1 0 1 0 0 0
..................................................................................CCATGCCGCGCCAGCCAGC...................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
..................................................................CGACGACGGTGACACGCC....................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1
................................................................................................................................................................................GTTGTGAAATCCCGTAATGTGCAAGG................................................. 26 0 1 1.00 1 0 1 0 0 0
...........................................GTCCGAATCGAGTCGCATTAGCT......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................CGACGGTGACACGCCATTCCGCGCC............................................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0
..............CGCGAGGGCTCCCATGACAGTCAT..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................CGCATTAGCACCACAACGGT............................................................................................................................................................................... 20 3 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................................................ATATGCCCCAGCGTTTGC........... 18 2 6 0.17 1 0 0 0 1 0
.................................................................................GCCATGCCCCGCCTGCCAGA...................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0

Anti-sense strand reads

TAGCGGCACTACGCGCGCTCCCGAGGGTACTGTCAGTACGGGGCAGGCTTAGCTCAGCGTAATCGAGCTGCTGCCACTGTGCGGTACGGCGCGGTCGGTCGGTGCAATGGTGGTGGTCGTGGTGGTTTTCACACCCATTTTTGCAACAATGGTTCGTCGTCGTCGTCGTAGTGTGACAACACTTTAGGGCATTACACGTTCCAAGATTGCTTTGTTAACTAGAATACGGCGTCGCAAACGTTTTTAGGGGC
*************************************************************************************.....((........(((.((.......(((.(((((......(((.((((........)))).)))...))))).))).....)).)))....))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body
.......................................CGGGGAGGCCTAGCTCAGCGT............................................................................................................................................................................................... 21 3 1 2.00 2 2 0
.....................................................................................ACGGCGCGGTCGGTGGGCGC.................................................................................................................................................. 20 2 1 1.00 1 1 0
......................................................................................CGGCGCGGTCGCACGGTGG.................................................................................................................................................. 19 3 3 0.33 1 1 0
...........................................................................................CGGTCGGTTTGTGCAATG.............................................................................................................................................. 18 2 3 0.33 1 1 0
.............CGGGCTCGCTAGGGTACTG........................................................................................................................................................................................................................... 19 3 9 0.22 2 1 1
...........................................................................................CGGTCGGTTTGTGCAATGC............................................................................................................................................. 19 3 12 0.17 2 2 0
..........................................................................................................AGGGTGTTGGCCGTGGTGGTT............................................................................................................................ 21 3 9 0.11 1 1 0
..............................................................................CGGCGGTATGGCGCGGTCG.......................................................................................................................................................... 19 3 10 0.10 1 1 0
.........................................................................................................AATGGTTGTGGCCGTGGTGG.............................................................................................................................. 20 2 11 0.09 1 1 0
................................................................................................TGTCGGTGCAATGGTAGGG........................................................................................................................................ 19 3 12 0.08 1 1 0
......................................................................................................................................CCATTTTGGCGACCATGGT.................................................................................................. 19 3 17 0.06 1 1 0
......................................................................................................................GGGATGGTTTTCAAACCCA.................................................................................................................. 19 3 20 0.05 1 1 0
.............................CTGTCAGTGCAGGGTAGG............................................................................................................................................................................................................ 18 3 20 0.05 1 1 0
.....................................................................................ACGGCGGGGTCGGTCCAT.................................................................................................................................................... 18 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004515:4381796-4382046 + dwi_1120 ATCGCCGTGATGCGCGCGAGGGCTCCCATGACAGTCATGCCCCGTCCGAATCGAGTCGCATTAGCTCGACGACGGTGACACGCCATGCCGCGCCAGCCAGCCACGTTACCACCACCAGCACCACCAAAAG---TGTGGGTAAAAACGTTGTTACCAAGCA------GCAGC---------AGCAGCATCACACTGTTGTGAAATCCCGTAATG--TGC-AAGGTTCT---AACGAAACAATTGATCTTATGCCGCAGCGTTTGCAAAAATC------------------------------------------CCCG
droVir3 scaffold_12928:485911-486140 + TTAGGCGCGACGGACGCGAGGGCTCCCATGACAGCCATGCGCCGTCCGAGTCCAGTCGCATCAGCTCGACGACGGTGACACGCCATGT---GGGCG---TGCC---CACTACCAAGAG---------------CGTGGGTAAAACACTCGTTACCAAGCA------GCAGC---------AGCAGCAACAAGCTGCTGTGAAGACCCGTAACG--TTC-AAGGTTCT---AACGAAACAATCGATCTTATGCCGCAGCGTTCGCCCAAATC------------------------------------------GCCA
droMoj3 scaffold_6328:1445253-1445479 + ATCGACGGTCTGGACGCGAGGGCAGCCACGACAGCCATGCGCCCTCCGAGTCGAGTCGCATCAGCTCCACCACGGTCACACGACATGT---GGGCG---TGCC---CAAGAC---------------------CATTGCCAAGACAACCGTTAGCAAGCAGCAGCAGCAGC---------AGCAGCAGCAAACTGTTGTCAAGACACGCAGCG--TGC-AGGGGTCG---AATGAGACAATTGATCTAACGCCGCAGCGTTTGCCCAAATC---------------------------------------------G
droGri2 scaffold_15203:6909572-6909807 + ATCGGCGCGATGGACGCGAGGGCTCCCACGACAGTCATGCGCCATCGGAGTCGAGTCGCATCAGCTCGACGACAGTGACACGTGGCCCTGTGGGCG---TGCC---CGCTGGCA------------AGAG---TGTGGGTAAAACACACGTTACCAAGCA------GCAAC---------AGCAGCAGCAGACTGTTGTGAAGACCCGTAACG--TTC-AAGGTTCT---AACGAAACAATTGATCTTATGCCGCAGCGTTCGCCCAAATCGCCAGC---------------------------------------A
dp5 XL_group1a:3548158-3548366 - ACCGCCGAGAGGGGCGCGAGGGCTCGCATGACAGCCAGGCGCCCTCGGAGTCGAGTCGCATTAGCACCACAACGGTGACAAGGCAGACGGCGGGTG---GA----TCAGCACCAGC--CACTCCCAAGAC---TGTGGCCAAAACGC-CGCC--------GCCGCAGCAACAGGTGGTTAAGCAGCAGCAGGTTACTACCAAGACGATC------------------AGCAACGA---------------------------ACCCAAGTC------------------------------------------GCCC
droPer2 scaffold_11:86978-87186 - ACCGCCGAGAGGGGCGCGAGGGCTCGCATGACAGCCAGGCGCCCTCGGAGTCGAGTCGCATTAGCACCACAACGGTGACAAGGCAGACGGCGGGTG---GA----TCAGCACCAGC--CACTCCCAAGAC---TGTGGCCAAAACGC-CGCC--------GCCGCAGCAACAGGTGGTTAAGCAGCAGCAGGTTACTACCAAGACGATC------------------AGCAACGA---------------------------ACCCAAGTC------------------------------------------GCCC
droAna3 scaffold_12929:3014865-3015052 + ATCGCCGGGAGATGCGCGAAGGCTCCCACGAGAGCCAGGCACCGTCCGAGTCGAGCCGGATTAGCTCCACCACGGTGACCCGGCACTC---GGGTG---GCAACAACACCACCAGCAGCACCACCACCAC---CACAACCACCAA-----------------------------GAATAAAGCG--ACCAAGG------C------ACCG--GTT--C-GAGGTCCC---AGCGA---------------------------GCCGAGATC------------------------------------------CCCC
droBip1 scf7180000395360:27467-27642 - ATCGCCGGGAGATGCGCGAGGGCTCGCACGAGAGCCAGGCTCCGTCCGAATCGAGCCGGATTAGCTCCACCACGGTGACCAGGCACTC---GGGCG---GGAA---CTCTACCACCACCACCACAACCAC---CAAGA--------------------------------------AT--AGAACCACCAAGC------C------ACCA--GTT--C-GAGGTCCC---AGCGA---------------------------GCCGCGGTC------------------------------------------CCCA
droKik1 scf7180000302517:11309-11529 - ATCGACGAGAGATGCGTGAGGGCTCCCACGAGAGCCAGGCGCCGTCGGAAACAAGCAGGATTAGCTCTAGCACGGTGACCAGGCATACGACAGGAG---GAAC---CACTACTAGCACCACCACAAAGACGAGCAAGAAGCCAAG-----------------------------T-----------------C------------CAGTG--GTGAGCCGAGGTCCC---AGCGA---------------------------GCCCAGGTCGCCAACACCGAAGGCGGGAGGACGTCACAGCGAGCCAAGATCGCCC
droFic1 scf7180000454072:954676-954842 - TCCGTCGGGAGATGCGCGAGGGCTCGCACGACAGCCAGGCGCCGTCGGAGTCGAGCCGGATAAGCTCGACAACCGTGACCCGGCACAC---TGGTG---GCAC---CACCACCAGCAGCACCACCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--C-GGGGTCCC---AGCGA---------------------------GCCGAGGTC------------------------------------------GCCC
droEle1 scf7180000491044:334598-334770 + TCCGCCGGGAGATGCGTGAGGGATCGCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCGACCACTGTGACCAGACATAC---GGGTG---GCACCACCAGCAGCAGCAGCACCACCAAGAC---CAAGACCACCAG-----------------------------G-----------------C---------------CG--GTG--A-AGAGTCCC---AGTGA---------------------------GCCGAGGTCGCCCAC---------------------------------------G
droRho1 scf7180000776942:18289-18455 + TCCGCCGGGAAATGCGTGAGGGCTCGCACGATAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCAACCACTGTGACCAGACACAC---GGGTG---GCCA---CACCACCAGCAGCACCACCAAGAC---CAAGACCACCAG-----------------------------G-----------------C---------------CG--GTG--A-AGAGTCCC---AGCGA---------------------------GCCGAGGTC------------------------------------------GCCC
droBia1 scf7180000301760:2952175-2952348 - TCCGTCGGGAGATGCGCGAGGGCTCCCACGACAGCCAGGCGCCCTCGGAGTCGAGCAGGATCAGCTCGACCACGGTGACCAGGCACAC---GGGTG---GCACCACCACCACCAGCAGCACCACCAAGAC---CAAGACCACCAA-----------------------------G-----------------C------C------GCCG--GTG--A-GGGGTCCC---AGCGA---------------------------GCCGAGGTCGCCC-----------------------------------------A
droTak1 scf7180000414549:60245-60431 + TCAGACGGGAGATGCGTGAGGGATCCCATGACAGCCAGGCACCTTCGGAATCGAGCAGGATCAGCTCGACCACTGTGACCAGGCATCAGACAGGTG---GCAG---CACCAC---CAGCACCACCAAGAC---CAAGACCACCAA-----------------------------G-----------------C------C------ACCG--GTGTCCAGAGGTCCCAGTAGTGA---------------------------GCCCAGGTCGCCCACCCCAAAAA-------------------------------C
droEug1 scf7180000409522:127441-127607 + TCCGTCGGGAAATGCGTGAGGGTTCGCATGATAGCCAGGCACCATCGGAATCAAGCCGAATTAGCTCGACCACTGTGACTAGGCATAC---AGGTG---GCAC---TACCACCACCAGCACTACCAAGAC---CAAGACCAGCAA-----------------------------G-----------------C---------------CG--GTT--A-AGAGTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------CCCA
dm3 chrX:6448502-6448671 + TCCGTCGGGAAATGCGTGAGGGTTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATCAGTTCGACCACTGTGACTAGGCACACCACCGGTG---GTAA---TGTTACCAGCAACACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTGCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCC
droSim2 x:6063240-6063409 + TCCGTCGGGAAATGCGTGAGGGCTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCGACCACTGTGACTAGGCACACCACCGGTG---GCAA---TGTCACTAGCAACACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCC
droSec2 scaffold_4:343884-344053 - TCCGTCGGGAAATGCGTGAGGGCTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCGACCACAGTGACTAGGCACACCACCGGTG---GCAA---TGTCACTAGCAACACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCC
droYak3 X:2424179-2424346 + TCCGTCGGGAAATGCGTGAGGGTTCTCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATCAGCTCGACCACTGTGACCAGGCACAC---AGGTG---GCAA---TGTCACCAGCAGCACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCCAGGTCGCCC-----------------------------------------A
droEre2 scaffold_4690:15388419-15388585 + TCCGTCGGGAAATGCGTGAGGGCTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATCAGCTCGACCACTGTGACCAGGCACAC---AGGTG---GCAA---TGTCACCAACAGCACCATTAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ATCGCCGTGATGCGCGCGAGGGCTCCCATGACAGTCATGCCCCGTCCGAATCGAGTCGCATTAGCTCGACGACGGTGACACGCCATGCCGCGCCAGCCAGCCACGTTACCACCACCAGCACCACCAAAAG---TGTGGGTAAAAACGTTGTTACCAAGCA------GCAGC---------AGCAGCATCACACTGTTGTGAAATCCCGTAATG--TGC-AAGGTTCT---AACGAAACAATTGATCTTATGCCGCAGCGTTTGCAAAAATC------------------------------------------CCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................GACGGTGACACGCCATGCC....................................................................................................................................................................................................................................1912.00202000
........................................................CGCATTAGCTCGACGACGGT.................................................................................................................................................................................................................................................2011.00100010
.....................................................................................................................................................GTTACCAAGCA------GCAGC---------AGCA.....................................................................................................................................2011.00100010
...............................................................................................................................................................................................................GTAATG--TGC-AAGGTTCT---AACGAAACA..............................................................................2611.00100100
..........................................................CATTAGCTCGACGACGGTGACACGC..........................................................................................................................................................................................................................................2511.00100100
.....CGTGATGCGCGCGAGGGC......................................................................................................................................................................................................................................................................................................1811.00100001
....................................ATGCCCCGTCCGAATCGAGT.....................................................................................................................................................................................................................................................................2011.00101000
........................................................................................................................................................................................GCATCACACTGTTGTGAAATCCCGT............................................................................................................2511.00101000
........GATGCGCGCGAGGGCTCCC..................................................................................................................................................................................................................................................................................................1911.00100100
...............................................................................................................................................................A------GCAGC---------AGCAGCATCACACT...........................................................................................................................2011.00101000
...........................................................ATTAGCTCGACGACGGTGA...............................................................................................................................................................................................................................................1911.00100100
...............................................................................................................................................................................................ACTGTTGTGAAATCCCGTAATG--TGC-..................................................................................................2511.00100100
...................................................................................................................................................................................................................................................ATCTTATGCCGCAGCGTTTGCAAA..................................................2411.00100010
.............GCGCGAGGGCTCCCATGACAGT..........................................................................................................................................................................................................................................................................................2211.00100010
.....................................................................................................................................................GTTACCAAGCA------GCAGC---------AGCAGC...................................................................................................................................2211.00101000
........................................................................................................................................................ACCAAGCA------GCAGC---------AGCAGCAT.................................................................................................................................2111.00100010
.........................................................................................................................................................CCAAGCA------GCAGC---------AGCAGCATCACACT...........................................................................................................................2611.00100010
......................................................GTCGCATTAGCTCGACGACGGTGA...............................................................................................................................................................................................................................................2411.00101000
.....................................................................................................................................................................................................................................................CTTATGCCGCAGCGTTTGCA....................................................2011.00100100
............................................................................................................................................AAAAACGTTGTTACCAAGCA------GCAGC---------A........................................................................................................................................2611.00100100
.................................................................................................................................................................................................................................................TGATCTTATGCCGCAGCGTTTGCAA...................................................2511.00101000
..................................................................................CCATGCCGCGCCAGCCAGC........................................................................................................................................................................................................................1911.00100010
..................................................................CGACGACGGTGACACGCC.........................................................................................................................................................................................................................................1811.00110000
..................................................................................................................................................................................................GTTGTGAAATCCCGTAATG--TGC-AAGG..............................................................................................2611.00101000
...........................................GTCCGAATCGAGTCGCATTAGCT...........................................................................................................................................................................................................................................................2311.00100100
..............CGCGAGGGCTCCCATGACAGTCAT.......................................................................................................................................................................................................................................................................................2411.00100100
droVir3
TTAGGCGCGACGGACGCGAGGGCTCCCATGACAGCCATGCGCCGTCCGAGTCCAGTCGCATCAGCTCGACGACGGTGACACGCCATGT---GGGCG---TGCC---CACTACCAAGAG---------------CGTGGGTAAAACACTCGTTACCAAGCA------GCAGC---------AGCAGCAACAAGCTGCTGTGAAGACCCGTAACG--TTC-AAGGTTCT---AACGAAACAATCGATCTTATGCCGCAGCGTTCGCCCAAATC------------------------------------------GCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................AGCCATGCGCCGTCCGAGTCCAGTCGC..................................................................................................................................................................................................................................................................2712.002001000000000000000000000000000000000000000000000000000000000010
........GACGGACGCGAGGGCTCCC..................................................................................................................................................................................................................................................................................................1912.002000000011000000000000000000000000000000000000000000000000000000
..................................................................CGACGACGGTGACACGCCATGT---GGGC..............................................................................................................................................................................................................................2612.002001000000000000000000000000001000000000000000000000000000000000
.........................................................GCATCAGCTCGACGACGGT.................................................................................................................................................................................................................................................1912.002001000000000000100000000000000000000000000000000000000000000000
.............................GACAGCCATGCGCCGTCCGAGTCC........................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000002
........GACGGACGCGAGGGCTCCCATGAC.............................................................................................................................................................................................................................................................................................2412.002200000000000000000000000000000000000000000000000000000000000000
.................GAGGGCTCCCATGACAGC..........................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
........GACGGACGCGAGGGCTCCCAT................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.................GAGGGCTCCCATGACAGCCATGCGCCGT................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000010000000000000000000000000
......................CTCCCATGACAGCCATGCGCC..................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................CGACGACGGTGACACGCCATGT---GGGCG---T.........................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................CGACGACGGTGACACGCCATGT---GGG...............................................................................................................................................................................................................................2511.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................CGACGGTGACACGCCATGT---GGGCG---T.........................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
........................CCCATGACAGCCATGCGCC..................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...................................................................GACGACGGTGACACGCCATGT---GGGC..............................................................................................................................................................................................................................2511.001000000000000100000000000000000000000000000000000000000000000000
...GGCGCGACGGACGCGAGGGCTCCCAT................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
................................AGCCATGCGCCGTCCGAGTCCAGTCGCATC...............................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................ACGGTGACACGCCATGT---GGGC..............................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
..........CGGACGCGAGGGCTCCCATGAC.............................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................CGACGGTGACACGCCATGT---GGGCG---TGCC---...................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...................................CATGCGCCGTCCGAGTCCAGTCG...................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...............................CAGCCATGCGCCGTCCGAGT..........................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
.....................................TGCGCCGTCCGAGTCCAGTCG...................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
.............................GACAGCCATGCGCCGTCCGAGTCCAGG.....................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
........................................GCCGTCCGAGTCCAGTCGCAT................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.................GAGGGCTCCCATGACAGCCATGCGCCGTCC..............................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000001
..............CGCGAGGGCTCCCATGACAGCCATGCGC...................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................GTAAAACACTCGTTACCAAGCA------GCAGC---------A........................................................................................................................................2821.002001000000000000000000000000000000000000000000000000000000001000
........................................................CGCATCAGCTCGACGACGGTGACAC............................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................GACAGCCATGCGCCGTCCGAGTCCAGT.....................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................GGTAAAACACTCGTTACCAAGCA------GCA....................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ACCAAGAG---------------CGTGGGTAAAACACT.........................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGAAGACCCGTAACG--TTC-AAGGTC............................................................................................2420.501000100000000000000000000000000000000000000000000000000000000000
............................................................................................GGCG---TGCC---CACTACCAAGAG---------------CGT.....................................................................................................................................................................................2320.501000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CTTATGCCGCAGCGTTCGCC....................................................2020.501001000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCG---TGCC---CACTACCAAGAG---------------CG......................................................................................................................................................................................2120.501000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GCGTTCGCCCAAATC------------------------------------------GCC.1820.501001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAAACACTCGTTACCAAGCA------.......................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAAACACTCGTTACCAAGCA------GCAGC---------AG.......................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GAAACAATCGATCTTATGCCGCAGC...........................................................2520.501001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ACTACCAAGAG---------------CGTGGGT.................................................................................................................................................................................1820.501000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGCTGCTGTGAAGACCCGTAA..........................................................................................................2120.501000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CTTATGCCGCAGCGTTCGCCCA..................................................2220.501000000000000000000000100000000000000000000000000000000000000000
....................................................................................ATGT---GGGCG---TGCC---CACTACCAAGAG---------------CGTG....................................................................................................................................................................................2920.501000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................G--TTC-AAGGTTCT---AACGAAACAATCG..........................................................................2520.501000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................GCAACAAGCTGCTGTGAAGACCCGTAAC.........................................................................................................2820.501001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGCCGCAGCGTTCGCCCAA.................................................1920.501000000000000000000000010000000000000000000000000000000000000000
...............................................................................................G---TGCC---CACTACCAAGAG---------------CGTGG...................................................................................................................................................................................2220.501000000000000010000000000000000000000000000000000000000000000000
...................................................................................CATGT---GGGCG---TGCC---CACTACCAAGAG---------------C.......................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GATCTTATGCCGCAGCGTTCGCCCAAA................................................2720.501000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................G---------------CGTGGGTAAAACACTCGT......................................................................................................................................................................1920.501000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AACAAGCTGCTGTGAAGACC...............................................................................................................2020.501000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................GCAACAAGCTGCTGTGAAGACCCGT............................................................................................................2520.501000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGAAGACCCGTAACG--TTC-AAGGTT............................................................................................2420.501000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAATCGATCTTATGCCGCAGC...........................................................2120.501000000010000000000000000000000000000000000000000000000000000000
............................................................................................................CTACCAAGAG---------------CGTGGGTAAAACACT.........................................................................................................................................................................2520.501000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................GCAGC---------AGCAGCAACAAGCTGC.........................................................................................................................2140.251000100000000000000000000000000000000000000000000000000000000000
droMoj3
ATCGACGGTCTGGACGCGAGGGCAGCCACGACAGCCATGCGCCCTCCGAGTCGAGTCGCATCAGCTCCACCACGGTCACACGACATGT---GGGCG---TGCC---CAAGAC---------------------CATTGCCAAGACAACCGTTAGCAAGCAGCAGCAGCAGC---------AGCAGCAGCAAACTGTTGTCAAGACACGCAGCG--TGC-AGGGGTCG---AATGAGACAATTGATCTAACGCCGCAGCGTTTGCCCAAATC---------------------------------------------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......GGTCTGGACGCGAGGGCA.....................................................................................................................................................................................................................................................................................................1811.001000001
.......................AGCCACGACAGCCATGCGC...................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................ACACGCAGCG--TGC-AGGGGT............................................................................................1911.001000100
................................AGCCATGCGCCCTCCGAGTC.........................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................GCG--TGC-AGGGGTCG---AATGAGACAATTG..........................................................................2711.001100000
....................................................GAGTCGCATCAGCTCCACCACG...................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................TGTCAAGACACGCAGCG--TGC-AGGGG.............................................................................................2511.001100000
......................CAGCCACGACAGCCATGCGCCC.................................................................................................................................................................................................................................................................................2211.001000001
.....................................................................................................................................................................................................GTCAAGACACGCAGCG--TGC-AGGG..............................................................................................2311.001100000
............................................................................................................................................................................................................CACGCAGCG--TGC-AGGGGT............................................................................................1811.001100000
.............ACGCGAGGGCAGCCACGACA............................................................................................................................................................................................................................................................................................2011.001000100
..................................................................................................................................................................AGCAGCAGC---------AGCAGCAGCAAACTGT.........................................................................................................................2520.501100000
droGri2
ATCGGCGCGATGGACGCGAGGGCTCCCACGACAGTCATGCGCCATCGGAGTCGAGTCGCATCAGCTCGACGACAGTGACACGTGGCCCTGTGGGCG---TGCC---CGCTGGCA------------AGAG---TGTGGGTAAAACACACGTTACCAAGCA------GCAAC---------AGCAGCAGCAGACTGTTGTGAAGACCCGTAACG--TTC-AAGGTTCT---AACGAAACAATTGATCTTATGCCGCAGCGTTCGCCCAAATCGCCAGC---------------------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................CCGCAGCGTTCGCCCAAATCG.............................................2111.00110
...................................................................................................TGCC---CGCTGGCA------------AGAG---TGTGG...................................................................................................................................................................................2111.00101
...................................................................GACGACAGTGACACGTGGC.......................................................................................................................................................................................................................................1911.00110
.............................................................................................................................................................................................................................................................GCAGCGTTCGCCCAAATCGCCAGC---------------------------------------.2411.00110
...............................................................................................................................................................................................................................................ATTGATCTTATGCCGCAGCGTTCGCC....................................................2611.00101
.............................................................................................................................................................................................................................................CAATTGATCTTATGCCGCAGCGTTCGCCC...................................................2911.00110
dp5
ACCGCCGAGAGGGGCGCGAGGGCTCGCATGACAGCCAGGCGCCCTCGGAGTCGAGTCGCATTAGCACCACAACGGTGACAAGGCAGACGGCGGGTG---GA----TCAGCACCAGC--CACTCCCAAGAC---TGTGGCCAAAACGC-CGCC--------GCCGCAGCAACAGGTGGTTAAGCAGCAGCAGGTTACTACCAAGACGATC------------------AGCAACGA---------------------------ACCCAAGTC------------------------------------------GCCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................ACAAGGCAGACGGCGGGT..............................................................................................................................................................................................................................1813.0030300000000
...............................CAGCCAGGCGCCCTCGGA............................................................................................................................................................................................................................................................................1811.0010100000000
.................................................................ACCACAACGGTGACAAGGCAGACGGCGGG...............................................................................................................................................................................................................................2911.0010000001000
.....................................................................................................................................................................AGCAACAGGTGGTTAAGC......................................................................................................................................1811.0010100000000
...........................................................................................................AGCACCAGC--CACTCCCAAGAC---........................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................AACAGGTGGTTAAGCAGCAGCAGGT............................................................................................................................2511.0010100000000
............................................................................GACAAGGCAGACGGCGGGT..............................................................................................................................................................................................................................1911.0010100000000
......................................................................AACGGTGACAAGGCAGACG....................................................................................................................................................................................................................................1911.0010100000000
...................................................CGAGTCGCATTAGCACCACAACGGT.................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................CAGCAGCAGGTTACTACCAAG..................................................................................................................2111.0010010000000
............................................................................GACAAGGCAGACGGCGGGTG---..........................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................ACTACCAAGACGATC------------------AGCAACGA---------------------------.......................................................2311.0010100000000
............................................................................GACAAGGCAGACGGCGGGTG---G.........................................................................................................................................................................................................................2111.0010100000000
...................................................................................CAGACGGCGGGTG---GA----TCAGCACCAGC--.......................................................................................................................................................................................................2611.0010100000000
.............................................CGGAGTCGAGTCGCATTAGCA...........................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................ACCAAGACGATC------------------AGCAACGA---------------------------ACC....................................................2311.0010100000000
.................................GCCAGGCGCCCTCGGAGTCGA.......................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................AGTCGCATTAGCACCACAACGGT.................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................ACCAAGACGATC------------------AGCAACGA---------------------------ACCCAA.................................................2611.0010100000000
...................................................................................................................................................................................................CTACCAAGACGATC------------------AGCAACGA---------------------------ACC....................................................2511.0010100000000
..................................................................CCACAACGGTGACAAGGCAG.......................................................................................................................................................................................................................................2011.0010001000000
.............................................CGGAGTCGAGTCGCATTAGC............................................................................................................................................................................................................................................................2011.0010000000001
droPer2
ACCGCCGAGAGGGGCGCGAGGGCTCGCATGACAGCCAGGCGCCCTCGGAGTCGAGTCGCATTAGCACCACAACGGTGACAAGGCAGACGGCGGGTG---GA----TCAGCACCAGC--CACTCCCAAGAC---TGTGGCCAAAACGC-CGCC--------GCCGCAGCAACAGGTGGTTAAGCAGCAGCAGGTTACTACCAAGACGATC------------------AGCAACGA---------------------------ACCCAAGTC------------------------------------------GCCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................ACTCCCAAGAC---TGTGGCC.................................................................................................................................................................................1813.003300000
........................................................CGCATTAGCACCACAACGGTGA...............................................................................................................................................................................................................................................2211.001010000
............................................................................GACAAGGCAGACGGCGGGTG---..........................................................................................................................................................................................................................2011.001010000
...........................................................................TGACAAGGCAGACGGCGGGTG---G.........................................................................................................................................................................................................................2211.001000001
droAna3
ATCGCCGGGAGATGCGCGAAGGCTCCCACGAGAGCCAGGCACCGTCCGAGTCGAGCCGGATTAGCTCCACCACGGTGACCCGGCACTC---GGGTG---GCAACAACACCACCAGCAGCACCACCACCAC---CACAACCACCAA-----------------------------GAATAAAGCG--ACCAAGG------C------ACCG--GTT--C-GAGGTCCC---AGCGA---------------------------GCCGAGATC------------------------------------------CCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........GATGCGCGAAGGCTCCCACGA..............................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................ATAAAGCG--ACCAAGG------C------ACCG--GTT--....................................................................................................2311.001000010
.........AGATGCGCGAAGGCTCCCACGAGAGCCA........................................................................................................................................................................................................................................................................................2811.001000001
..........GATGCGCGAAGGCTCCCACGAGAGCCA........................................................................................................................................................................................................................................................................................2711.001000001
...............................................................................................................................................................................AATAAAGCG--ACCAAGG------C------ACC............................................................................................................2011.001010000
...........................................................................................................................................................................................CCAAGG------C------ACCG--GTT--C-GAGGT.............................................................................................2011.001000001
...............................................................................................G---GCAACAACACCACCAGCAGCACC...................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................AGGTCCC---AGCGA---------------------------GCCGAGATC------------------------------------------CCCC2511.001000001
...........................................................................................................................................................................................CCAAGG------C------ACCG--GTT--C-GAGGTC............................................................................................2111.001000001
..........................................................................................................................................................................................ACCAAGG------C------ACCG--GTT--C-GAGGTCCC---.......................................................................................2411.001000001
............................................................................................................................................................................................................................AGGTCCC---AGCGA---------------------------GCCGAGATC------------------------------------------....2111.001100000
.......................................................................................................................................................................................G--ACCAAGG------C------ACCG--GTT--C-GAGGT.............................................................................................2211.001000001
.......................TCCCACGAGAGCCAGGCAC...................................................................................................................................................................................................................................................................................1911.001000001
droBip1
ATCGCCGGGAGATGCGCGAGGGCTCGCACGAGAGCCAGGCTCCGTCCGAATCGAGCCGGATTAGCTCCACCACGGTGACCAGGCACTC---GGGCG---GGAA---CTCTACCACCACCACCACAACCAC---CAAGA--------------------------------------AT--AGAACCACCAAGC------C------ACCA--GTT--C-GAGGTCCC---AGCGA---------------------------GCCGCGGTC------------------------------------------CCCASizeHit CountTotal NormTotal
No Reads
droKik1
ATCGACGAGAGATGCGTGAGGGCTCCCACGAGAGCCAGGCGCCGTCGGAAACAAGCAGGATTAGCTCTAGCACGGTGACCAGGCATACGACAGGAG---GAAC---CACTACTAGCACCACCACAAAGACGAGCAAGAAGCCAAG-----------------------------T-----------------C------------CAGTG--GTGAGCCGAGGTCCC---AGCGA---------------------------GCCCAGGTCGCCAACACCGAAGGCGGGAGGACGTCACAGCGAGCCAAGATCGCCCSizeHit CountTotal NormTotal
No Reads
droFic1
TCCGTCGGGAGATGCGCGAGGGCTCGCACGACAGCCAGGCGCCGTCGGAGTCGAGCCGGATAAGCTCGACAACCGTGACCCGGCACAC---TGGTG---GCAC---CACCACCAGCAGCACCACCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--C-GGGGTCCC---AGCGA---------------------------GCCGAGGTC------------------------------------------GCCCSizeHit CountTotal NormTotal
No Reads
droEle1
TCCGCCGGGAGATGCGTGAGGGATCGCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCGACCACTGTGACCAGACATAC---GGGTG---GCACCACCAGCAGCAGCAGCACCACCAAGAC---CAAGACCACCAG-----------------------------G-----------------C---------------CG--GTG--A-AGAGTCCC---AGTGA---------------------------GCCGAGGTCGCCCAC---------------------------------------GSizeHit CountTotal NormTotal
No Reads
droRho1
TCCGCCGGGAAATGCGTGAGGGCTCGCACGATAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCAACCACTGTGACCAGACACAC---GGGTG---GCCA---CACCACCAGCAGCACCACCAAGAC---CAAGACCACCAG-----------------------------G-----------------C---------------CG--GTG--A-AGAGTCCC---AGCGA---------------------------GCCGAGGTC------------------------------------------GCCCSizeHit CountTotal NormTotal
No Reads
droBia1
TCCGTCGGGAGATGCGCGAGGGCTCCCACGACAGCCAGGCGCCCTCGGAGTCGAGCAGGATCAGCTCGACCACGGTGACCAGGCACAC---GGGTG---GCACCACCACCACCAGCAGCACCACCAAGAC---CAAGACCACCAA-----------------------------G-----------------C------C------GCCG--GTG--A-GGGGTCCC---AGCGA---------------------------GCCGAGGTCGCCC-----------------------------------------ASizeHit CountTotal NormTotal
No Reads
droTak1
TCAGACGGGAGATGCGTGAGGGATCCCATGACAGCCAGGCACCTTCGGAATCGAGCAGGATCAGCTCGACCACTGTGACCAGGCATCAGACAGGTG---GCAG---CACCAC---CAGCACCACCAAGAC---CAAGACCACCAA-----------------------------G-----------------C------C------ACCG--GTGTCCAGAGGTCCCAGTAGTGA---------------------------GCCCAGGTCGCCCACCCCAAAAA-------------------------------CSizeHit CountTotal NormTotal
No Reads
droEug1
TCCGTCGGGAAATGCGTGAGGGTTCGCATGATAGCCAGGCACCATCGGAATCAAGCCGAATTAGCTCGACCACTGTGACTAGGCATAC---AGGTG---GCAC---TACCACCACCAGCACTACCAAGAC---CAAGACCAGCAA-----------------------------G-----------------C---------------CG--GTT--A-AGAGTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------CCCASizeHit CountTotal NormTotal
No Reads
dm3
TCCGTCGGGAAATGCGTGAGGGTTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATCAGTTCGACCACTGTGACTAGGCACACCACCGGTG---GTAA---TGTTACCAGCAACACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTGCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................AGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--G........................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAGGCGCCATCGGAATCGAGC.....................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................CCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAAC..............................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................C---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-..................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGGCGCCATCGGAATCGAGCAGGATC...............................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGACAGCCAGGCGCCATC...............................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGCGTGAGGGTTCCCATG...............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCCAGGCGCCATCGGAATCGAGCAGG..................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..CGTCGGGAAATGCGTGAGGGTTC....................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................CCCATGACAGCCAGGCGCCATCGGA............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CATGACAGCCAGGCGCCATCG..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................CACCACCGGTG---GTAA---TGTTA..............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................CAGCCAGGCGCCATCGGAATCGAGCAGG..................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................GCGCCATCGGAATCGAG......................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CGGTG---GTAA---TGTTACCAGCATTT.....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GACAGCCAGGCGCCATCGGAATCGA.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................CAGCAACACCATCAAGAC---CAA.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGGGAAATGCGTGAGGGTTCC...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................ACAGCCAGGCGCCATCGGAATCGA.......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.CCGTCGGGAAATGCGTGAGGGTT.....................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................CAGGCGCCATCGGAATCGA.......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCATGACAGCCAGGCGCCATCA..............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................AGCCAGGCGCCATCGGAATC.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GT.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------.............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTGCC---A......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGGCGCCATCGGAATCGAGCAGT..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GACCACTGTGACTAGGCACACCACC.................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................CAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTGCC---AGCGA---------------------------GCCAA..................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTGCC---AGC....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCGTGAGGGTTCCCATGAC.............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................G-----------------C---------------CG--GTG--A-AAACTGCC---AGCGA---------------------------.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AAACTGCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAGCCAGGCGCCATCGGAATCGAGCAG...................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................GACAGCCAGGCGCCATCGGA............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................AGCCAGGCGCCATCGGAATCG........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..CGTCGGGAAATGCGTGAGGGT......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................AGGCGCCATCGGAATCGAGCAGG..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GGAAATGCGTGAGGGTTCC...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCGGGAAATGCGTGAGGGTTCC...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..CGTCGGGAAATGCGTGAGG........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................AGCCAGGCGCCATCGGAATCGAGCAG...................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................CACCATCAAGAC---CAAGACCACCA.............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGGCGCCATCGGAATCGAGC.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AGGCACACCACCGGTG---GT........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AATCGAGCAGGATCAGTTC..........................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCCGTCGGGAAATGCGTGAGGGCTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCGACCACTGTGACTAGGCACACCACCGGTG---GCAA---TGTCACTAGCAACACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................GCAGGATTAGCTCGACCACTG..................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................CATCGGAATCGAGCAGGATTAGCTC..........................................................................................................................................................................................................................................................2511.00101000000000000000
...........................................ATCGGAATCGAGCAGGATTAGCTC..........................................................................................................................................................................................................................................................2411.00100100000000000000
.................................................................TCGACCACTGTGACTG............................................................................................................................................................................................................................................1640.25100000001000000000
droSec2
TCCGTCGGGAAATGCGTGAGGGCTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATTAGCTCGACCACAGTGACTAGGCACACCACCGGTG---GCAA---TGTCACTAGCAACACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................AGCAGGATTAGCTCGACCAC....................................................................................................................................................................................................................................................2011.0010010
............TGCGTGAGGGCTCCCATG...............................................................................................................................................................................................................................................................................................1811.0010010
.................................................................................................................................C---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GT.......................................................................................................1911.0010010
.....................................................AGCAGGATTAGCTCGACCA.....................................................................................................................................................................................................................................................1911.0010100
.......................................................CAGGATTAGCTCGACCACAGT.................................................................................................................................................................................................................................................2111.0010010
droYak3
TCCGTCGGGAAATGCGTGAGGGTTCTCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATCAGCTCGACCACTGTGACCAGGCACAC---AGGTG---GCAA---TGTCACCAGCAGCACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCCAGGTCGCCC-----------------------------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................CAGGCACAC---AGGTG---GCAA---T..................................................................................................................................................................................................................1911.00100000100000
.............................................................................................................CACCAGCAGCACCATCAAGAC---CAA.....................................................................................................................................................................................2411.00101000000000
........................CTCATGACAGCCAGGCGCCATC...............................................................................................................................................................................................................................................................................2211.00100100000000
...................................................................GACCACTGTGACCAGGCACAC---AGGC..............................................................................................................................................................................................................................2511.00100100000000
.....................................................................................................................................................................................................................TG--A-AAACTCCC---AGCGA---------------------------GCCCAGGTC..............................................2511.00101000000000
.................GAGGGTTCTCATGACAGCCAGGCGCC..................................................................................................................................................................................................................................................................................2611.00101000000000
......................................................................................................................CACCATCAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--.........................................................................................................2811.00101000000000
.............................GACAGCCAGGCGCCATCGGAATCGA.......................................................................................................................................................................................................................................................................2511.00100000010000
...............................................................................................................................GAC---CAAGACCACCAA-----------------------------G-----------------C---------------C............................................................................................................1811.00100000100000
...........................ATGACAGCCAGGCGCCATCGG.............................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
TCCGTCGGGAAATGCGTGAGGGCTCCCATGACAGCCAGGCGCCATCGGAATCGAGCAGGATCAGCTCGACCACTGTGACCAGGCACAC---AGGTG---GCAA---TGTCACCAACAGCACCATTAAGAC---CAAGACCACCAA-----------------------------G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGTC------------------------------------------GCCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................G-----------------C---------------CG--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGT...............................................2919.0090000009
..CGTCGGGAAATGCGTGAGGG.......................................................................................................................................................................................................................................................................................................2012.0020000020
.......GGAAATGCGTGAGGGCTCCC..................................................................................................................................................................................................................................................................................................2011.0011000000
.........................................................................................................................................................................................................................A-AAACTCCC---AGCGA---------------------------GCCAAGGT...............................................2211.0011000000
...................................................................GACCACTGTGACCAGGCACAC---AGGT..............................................................................................................................................................................................................................2511.0011000000
.............................................................................................GTG---GCAA---TGTCACCAACAGCAC....................................................................................................................................................................................................2211.0011000000
............TGCGTGAGGGCTCCCATGA..............................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................G--GTG--A-AAACTCCC---AGCGA---------------------------GCCAAGGT...............................................2611.0011000000

Generated: 05/18/2015 at 12:40 AM