ID:

dwi_1109

 Coordinate:

scf2_1100000004515:3850094-3850244 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.5 -23.4 -23.1

Flybase annnotation

exon [dwil_GLEANR_2697:10]; CDS [Dwil\GK20104-cds]; intron [Dwil\GK20104-in]

Repeatable elements

NameClassFamilyStrand
Homo2DNAhAT-Ac-
mature
  1. scf2_1100000011189:972-996 +
  2. scf2_1100000004511:372721-372745 -
  3. scf2_1100000004511:2869512-2869536 -
  4. dwi_1109  scf2_1100000004515:3850116-3850140 +
  5. scf2_1100000004577:1851190-1851214 +
  6. scf2_1100000004620:123843-123867 +
  7. scf2_1100000004729:12215-12239 +
  8. scf2_1100000004785:14943-14967 -
  9. scf2_1100000004837:694379-694403 -
  10. scf2_1100000004884:322252-322276 +
  11. scf2_1100000004884:1148078-1148102 +
  12. scf2_1100000004909:678113-678137 -
  13. scf2_1100000004921:4590388-4590412 -
  14. scf2_1100000004949:1114215-1114239 +
  15. scf2_1100000004952:440063-440087 +
  16. scf2_1100000004953:1333715-1333739 +
  17. scf2_1100000004954:3438180-3438204 +
  18. scf2_1100000004954:4430388-4430412 +
  19. scf2_1100000004958:775706-775730 +
  20. scf2_1100000004958:2557651-2557675 +
  21. scf2_1100000005823:665-689 -
  22. scf2_1100000004945:121270-121294 -
  23. scf2_1100000004963:2511998-2512022 -
  24. scf2_1100000004521:6826430-6826454 -
  25. scf2_1100000004963:4277214-4277238 -
star
  1. scf2_1100000005823:611-638 -
  2. scf2_1100000004356:1094-1121 +
  3. scf2_1100000004511:372667-372694 -
  4. scf2_1100000004511:2869458-2869485 -
  5. dwi_1109  scf2_1100000004515:3850167-3850194 +
  6. scf2_1100000004577:1851241-1851268 +
  7. scf2_1100000004620:123894-123921 +
  8. scf2_1100000004785:14889-14916 -
  9. scf2_1100000004884:322303-322330 +
  10. scf2_1100000004884:1148129-1148156 +
  11. scf2_1100000004887:365070-365097 -
  12. scf2_1100000004945:121216-121243 -
  13. scf2_1100000004909:678059-678086 -
  14. scf2_1100000004949:1114266-1114293 +
  15. scf2_1100000004954:3438231-3438258 +
  16. scf2_1100000004954:4430439-4430466 +
  17. scf2_1100000004958:775757-775784 +
  18. scf2_1100000004958:2557702-2557729 +
  19. scf2_1100000004963:2511944-2511971 -
  20. scf2_1100000004963:4277160-4277187 -
  21. scf2_1100000004521:6826376-6826403 -
  22. scf2_1100000004837:694325-694352 -
  23. scf2_1100000004943:3525317-3525344 -
  24. scf2_1100000004921:4590334-4590361 -
  25. scf2_1100000004953:1311748-1311775 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTTAACAATAGTGAGCAAGTGAGCAAAAAAGAACTAGTGAGCAATAAAGAACAATTGAGCAAAAAAGAACAATTCGAGAGGAACATGTTCAGTTGCTCAGTTTAGTGAACAACTCTTTTTTGTTCACTCACTCATGAGCAACCCAACACTACTTTCTGCGTCTTCTTCACCTGACTAATTCTTCTTTCTGCTTTCTCCTAGATTTGCAGTTTGCTGCGCGGTGGAATTGCCGAGCGGGGGGGTGTACGTGT
************************************************************************.............((((..((((((((....(((((((((.......)))))))))......))))))))..))))...**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
........................................................................TTCGAGAGGAACATGTTCAGTTGCT.......................................................................................................................................................... 25 0 20 1.25 25 10 14 0 0 1
........................................................................TTCGAGAGGAACATGTTCAGTTGC........................................................................................................................................................... 24 0 20 0.65 13 10 1 1 1 0
...........................................................................................................................TCACTCACTCATGAGCAACCCAACACTA.................................................................................................... 28 0 20 0.55 11 4 7 0 0 0
.......................................................................................................................................................................................................................GCACGGTGGGATTGCAGAGC................ 20 3 2 0.50 1 1 0 0 0 0
...........................................................................................................................TCACTCACTCATGAGCAACCCAACAC...................................................................................................... 26 0 20 0.35 7 5 2 0 0 0
................AAGTGAGATAAAAAGAACTA....................................................................................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTTGCTC......................................................................................................................................................... 26 0 20 0.30 6 5 1 0 0 0
...........................................................................................................................TCACTCACTCATGAGCAACCCAACA....................................................................................................... 25 0 20 0.30 6 5 1 0 0 0
............................................................................................................................CACTCACTCATGAGCAACCCAACACTA.................................................................................................... 27 0 20 0.25 5 4 1 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTTG............................................................................................................................................................ 23 0 20 0.25 5 5 0 0 0 0
..........................................................................................................................TTCACTCACTCATGAGCAACCCAACACTA.................................................................................................... 29 0 20 0.20 4 3 1 0 0 0
........................................................................................................................TGTTCACTCACTCATGAGCAACCCAA......................................................................................................... 26 0 20 0.20 4 4 0 0 0 0
....................................................................................................................................................................................................................GCTGCGCGGCGGAATTGG..................... 18 2 6 0.17 1 1 0 0 0 0
.............................................................................................................................ACTCACTCATGAGCAACCCAACACTA.................................................................................................... 26 0 20 0.15 3 0 3 0 0 0
...............................................................................................................................TCACTCATGAGCAACCCAACACTA.................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
...............................................................................................................................TCACTCATGAGCAACCCAACAC...................................................................................................... 22 0 20 0.15 3 1 2 0 0 0
....................................................................................................................TTTTTGTTCACTCACTCATGAGCAACC............................................................................................................ 27 0 20 0.15 3 3 0 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTTGCTCA........................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
........................................................................................................................TGTTCACTCACTCATGAGCAACCCA.......................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................TCACTCACTCATGAGCAACCCAAC........................................................................................................ 24 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................TCACTCACTCATGAGCAACCCAACACT..................................................................................................... 27 0 20 0.10 2 1 1 0 0 0
.................................................................................................................TCTTTTTTGTTCACTCACTCATGAGCA............................................................................................................... 27 0 20 0.10 2 1 1 0 0 0
.....................................................................................................................TTTTGTTCACTCACTCATGAGCAACC............................................................................................................ 26 0 20 0.10 2 2 0 0 0 0
.....................................................................CAATTCGAGAGGAACATGTTCAGT.............................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0
......................................................................................................................TTTGTTCACTCACTCATGAGCAACCC........................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................................................................................................................GGTGAGATTCCCGAGCGG.............. 18 3 20 0.10 2 2 0 0 0 0
................................................................................................................................CACTCATGAGCAACCCAACACTA.................................................................................................... 23 0 20 0.10 2 1 1 0 0 0
..............................GAACTAGTGAGCACGAAAGT......................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 1 0 0
.....................................................................................................TTAGTGAACAACTCTTTTTTGTTCA............................................................................................................................. 25 0 12 0.08 1 1 0 0 0 0
..............................................................................................GCTCAGTTTAGTGAACAACTCTTTT.................................................................................................................................... 25 0 13 0.08 1 1 0 0 0 0
.............................................................................................TGCTCAGTTTAGTGAACAACTCTTTT.................................................................................................................................... 26 0 13 0.08 1 1 0 0 0 0
.....................................................................................TGTTCAGTTGCTCAGTTTAGTGAA.............................................................................................................................................. 24 0 15 0.07 1 0 1 0 0 0
................................................................................GAACATGTTCAGTTGCTCAGTTTAGT................................................................................................................................................. 26 0 16 0.06 1 0 1 0 0 0
........................................................................................TCAGTTGCTCAGTTTAGTGAA.............................................................................................................................................. 21 0 16 0.06 1 0 1 0 0 0
....................................................................................ATGTTCAGTTGCTCAGTTTAGT................................................................................................................................................. 22 0 17 0.06 1 0 1 0 0 0
......................................................................................GTTCAGTTGCTCAGTTTAGTG................................................................................................................................................ 21 0 17 0.06 1 0 1 0 0 0
........................................................................................TCAGTTGCTCAGTTTAGTGA............................................................................................................................................... 20 0 18 0.06 1 0 1 0 0 0
.........................................................................................................................GTTCACTCACTCATGAGCAAC............................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
............................................................................................................................CACTCACTCATGAGCAACCCAACACT..................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
....ACAATAGTGAGCAAGTGAGC................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................TTCACTCACTCATGAGCAACCCA.......................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
......................................................................................................................TTTGTTCACACACTCATGAGCAACC............................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.............................................................................................................CAACTCTTTTTTGTTCACTCACTCA..................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................GTTCACTCACTCATGAGCAACCCAACA....................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
....................................................................ACAATTCGAGAGGAACATTTTCACT.............................................................................................................................................................. 25 2 20 0.05 1 1 0 0 0 0
....................................................................................................................TTTTTGTTCACGCACTCATGAGCAACC............................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
........................................................................TTCGAGAGGAAAATGTTCAGTTGCT.......................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.............................................................................................................CAACTCTTTTTTGTTCACTCACTC...................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.........................................................................TCGAGAGGAACATGTTCAGTTGC........................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................GAGAGGAACATGTTCAGTTGCT.......................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
........................................................................................................................TGTTCACTCACTCATGAGCAACCCAACA....................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
............................................................................................................................CACGCACTCATGAGCAACCCAACACT..................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................CTCACTCATGAGCAACCCAACACT..................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..................................................................GAACAATTCGAGAGGAACATGTTCAG............................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....................................................................CAATTCGAGAGGAACATGTTCAGTTGC........................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..............................................................................................................AACTCTTTTTTGTTCACTCACTC...................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................AAAGAACAATTCGAGAGGAACATGT................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
........TAGTTAGCAAGTGAGCAAAAAAGA........................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
......................................................................AATTCGAGAGGAACATGTTCA................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
......................................................................................................................TTTGTTCACTCACTCATGAGCAACC............................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................TGTTCACTCACTCATGAGCAACCCAAC........................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
.............................................................................................................CAACTCTTTTTTGTTCACTCA......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.........................................................................TCGAGAGGAACATGTTCAGTTG............................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................CTTCACTCACTCATGAGCAACCCA.......................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTT............................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................TTCACTCACTCATGAGCAACCCAACAC...................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................ACTCACTCATGAGCAACCCAA......................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................TCACTCATGAGCAACCCAACACT..................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTTGATCA........................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0 0
..........................................................GCAAAAAAGATCAATTCGGC............................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1 0
...............................................................................................................ACTCTTTTTTGTTCACTCACT....................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
.......................................................................ATTCGAGAGGAACATGTTCAGTTG............................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
..............................................................................................................AACTCTTTTTTGTTCACTCACTCAT.................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................................CTTTTTTGTTCACTCACTCATGA.................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
................................................................AAGAACAATTCGAGAGGAACATGTT.................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................TGTTCACTCACTCATGAGCAACCCAACAC...................................................................................................... 29 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................GTGGAATTCCCGACCGGC............. 18 3 20 0.05 1 1 0 0 0 0
.....................................................................CAATTCGAGAGGAACATGTTCAG............................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTTGCTCT........................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
.........................................................................TCGAGAGGAACATGTTCAGTTGCT.......................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
...................................................................................................................TTTTTTGTTCACTCACTCATG................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
......................................................................................................................TTTGTTCACTCACTCATGAGCAACCCAA......................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
......................................................................................................................TTTGTTCACTCACTCACGAGCAACC............................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
......................................................................................................................TTTGTTCACTCACTCATGAGCAACCCA.......................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
........................................................................................................................TGTTCACTCACTCATGAGCA............................................................................................................... 20 0 20 0.05 1 0 1 0 0 0
.................................................................................................................TCTTTTTTGTTCACTCACTCATGAGC................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
........................................................................TTCGAGAGGAACATGTTCAGTTGCTT......................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................TCACTCACTCATGAGCAACC............................................................................................................ 20 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CAATTGTTATCACTCGTTCACTCGTTTTTTCTTGATCACTCGTTATTTCTTGTTAACTCGTTTTTTCTTGTTAAGCTCTCCTTGTACAAGTCAACGAGTCAAATCACTTGTTGAGAAAAAACAAGTGAGTGAGTACTCGTTGGGTTGTGATGAAAGACGCAGAAGAAGTGGACTGATTAAGAAGAAAGACGAAAGAGGATCTAAACGTCAAACGACGCGCCACCTTAACGGCTCGCCCCCCCACATGCACA
****************************************************************************************************.............((((..((((((((....(((((((((.......)))))))))......))))))))..))))...************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
.......................................................................................................................................................................................................TCTAAACGTTAGACGACGCG................................ 20 2 2 2.00 4 4 0 0 0
.......................................................................................................................................................................................................TCTAAACGTGAGACGACGCGA............................... 21 3 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................TCTAAACGTTAGACGACGC................................. 19 2 4 0.75 3 3 0 0 0
.................................................................................................................................................TGTGATCAAAGACCCGGAAG...................................................................................... 20 3 4 0.50 2 0 2 0 0
.................................................................................................................................................TGTGATCAAAGACCCGGAAGA..................................................................................... 21 3 2 0.50 1 0 1 0 0
...........................................................................................................................AGTGAGTGAGTACTCGTTGGGTTGT....................................................................................................... 25 0 20 0.40 8 0 8 0 0
.......................................................................................................................................................................................................TCTAAACGTTAGACGACGCGA............................... 21 3 5 0.40 2 2 0 0 0
.........................................................................................................ACTTGTTGAGAAAAAACAAGTGAGT......................................................................................................................... 25 0 14 0.36 5 1 4 0 0
..................................................................................TGTACAAGTCAACGAGTCAAATCACT............................................................................................................................................... 26 0 16 0.31 5 4 1 0 0
............................................................................................................TGTTGAGAAAAAACAAGTGAGTGAGT..................................................................................................................... 26 0 20 0.30 6 3 3 0 0
...............................................................................................................................AGTGAGTACTCGTTGGGTTGTGAT.................................................................................................... 24 0 20 0.30 6 2 4 0 0
.....................................................................................ACAAGTCAACGAGTCAAATCACTTGT............................................................................................................................................ 26 0 14 0.29 4 4 0 0 0
........................................................................................................................................................................................................CTAAACGTTAGACGACGC................................. 18 2 7 0.29 2 2 0 0 0
............................................................................................................................GTGAGTGAGTACTCGTTGGGTTGT....................................................................................................... 24 0 20 0.25 5 0 5 0 0
............................................................................................................TGTTGAGAAAAAACAAGTGAGTGAG...................................................................................................................... 25 0 20 0.25 5 5 0 0 0
.........................................................................................................................CAAGTGAGTGAGTACTCGTTGGGT.......................................................................................................... 24 0 20 0.25 5 0 5 0 0
..................................................................................TGTACAAGTCAACGAGTCAAAT................................................................................................................................................... 22 0 20 0.25 5 2 0 3 0
...................................................................................GTACAAGTCAACGAGTCAAATCACTTGT............................................................................................................................................ 28 0 14 0.21 3 3 0 0 0
................................................................................................................GAGAAAAAACAAGTGAGTGAGTACT.................................................................................................................. 25 0 20 0.20 4 4 0 0 0
.......TATCACTCGTTCACTCGTTTTTTCT........................................................................................................................................................................................................................... 25 0 20 0.20 4 2 2 0 0
.............................................................................................................GTTGAGAAAAAACAAGTGAGTGAGT..................................................................................................................... 25 0 20 0.20 4 2 2 0 0
...................................................................................GTACAAGTCAACGAGTCAAATCACT............................................................................................................................................... 25 0 16 0.19 3 2 1 0 0
.....................................................................................................................................................................................................GATCTCAACGACAAACGACAC................................. 21 3 6 0.17 1 1 0 0 0
.............................................................................................ACGAGTCAAATCACTTGTTGAGAAAA.................................................................................................................................... 26 0 13 0.15 2 0 2 0 0
....TGTTATCACTCGTTCACTCGTTTTT.............................................................................................................................................................................................................................. 25 0 20 0.15 3 2 1 0 0
...........................................................................................................................AGTGAGTGAGTACTCGTTGGGT.......................................................................................................... 22 0 20 0.15 3 0 3 0 0
..............................................................................................................................GAGTGAGTACTCGTTGGGTTGT....................................................................................................... 22 0 20 0.15 3 0 3 0 0
..................................................................................TGTACAAGTCAACGAGTCAAATCACTT.............................................................................................................................................. 27 0 15 0.13 2 2 0 0 0
.....................................................................GTTAAGCTCTCCTTGTACAAGTCAAC............................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0
..............................................................................................................TTGAGAAAAAACAAGTGAGTGAGT..................................................................................................................... 24 0 20 0.10 2 2 0 0 0
.................................................................................................................AGAAAAAACAAGTGAGTGAGTACT.................................................................................................................. 24 0 20 0.10 2 0 2 0 0
................................................................TTCTTGTTAAGCTCTCCTTGTACA................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0
...............................................................................CCTTGTACAAGTCAACGAGTCAAAT................................................................................................................................................... 25 0 20 0.10 2 1 1 0 0
.......TATCACTCGTTCACTCGTTTTTTCTT.......................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
........ATCACTCGTTCACTCGTTTTT.............................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0
............................................................................TCTCCTTGTACAAGTCAACGAGTCAAAT................................................................................................................................................... 28 0 20 0.10 2 2 0 0 0
.............................................................................................................................TGAGTGAGTACTCGTTGGGTTGT....................................................................................................... 23 0 20 0.10 2 2 0 0 0
....................................................................................................................................GTACCCATTGGGGTGTGATG................................................................................................... 20 3 12 0.08 1 1 0 0 0
...............................................................................CCTTGTACAAGTCAACGAGTCAAATCACT............................................................................................................................................... 29 0 13 0.08 1 1 0 0 0
............................................................................................AACGAGTCAAATCACTTGTTGAGAA...................................................................................................................................... 25 0 13 0.08 1 0 1 0 0
.............................................................................................ACGAGTCAAATCACTTGTTGAGAAA..................................................................................................................................... 25 0 13 0.08 1 1 0 0 0
..............................................................................................CGAGTCAAATCACTTGTTGAGAAAA.................................................................................................................................... 25 0 13 0.08 1 1 0 0 0
............................................................................................AACGAGTCAAATCACTTGTTGAGAAAA.................................................................................................................................... 27 0 13 0.08 1 0 1 0 0
..................................................................................................................................................GTGATCAAAGACCCGGAAGA..................................................................................... 20 3 14 0.07 1 0 1 0 0
......................................................................................CAAGTCAACGAGTCAAATCACTTGT............................................................................................................................................ 25 0 14 0.07 1 0 1 0 0
..................................................................................GGTACAAGTCAACGAGTCAAATCACTT.............................................................................................................................................. 27 1 15 0.07 1 0 0 1 0
........................................................................................................................................................................................................CTAAACGTTAGACGACGCGA............................... 20 3 15 0.07 1 1 0 0 0
...................................................................................GTACAAGTCAACGAGTCAAATCACTT.............................................................................................................................................. 26 0 15 0.07 1 1 0 0 0
....................................................................................TACAAGTCAACGAGTCAAATCAC................................................................................................................................................ 23 0 16 0.06 1 0 0 1 0
.................................................................................TTGTACAAGTCAACGAGTCAAATCACT............................................................................................................................................... 27 0 16 0.06 1 0 1 0 0
.........................................................................................................................................................................GGACTAATTATGAAGAAA................................................................ 18 2 18 0.06 1 0 1 0 0
......................................................................................CAAGTCAACGAGTCAAATC.................................................................................................................................................. 19 0 18 0.06 1 0 0 1 0
CAATTGTTATCACTCGTTCACTCGTTT................................................................................................................................................................................................................................ 27 0 19 0.05 1 1 0 0 0
CAATTGTTATCACTCGTTCACTCGT.................................................................................................................................................................................................................................. 25 0 19 0.05 1 1 0 0 0
CAATTGTTATCACTCGTTCACTCGTTTT............................................................................................................................................................................................................................... 28 0 19 0.05 1 1 0 0 0
.......TATCACTCGTTCACTCGTTTTA.............................................................................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0
....TGTTATCACTCGTTCACTCGTTTT............................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
..........................................................................................................................TAGTGAGTGAGTACTCGTTGGGTTGT....................................................................................................... 26 1 20 0.05 1 0 0 0 1
............................................................................................................................GTGAGTGAGTACTCGTTGGGTTGTGAT.................................................................................................... 27 0 20 0.05 1 1 0 0 0
........................................................................................................................CTAAGTGAGTGAGTACTCGTTGGGTTGT....................................................................................................... 28 2 20 0.05 1 0 1 0 0
........................................................................................................................ACAAGTGAGTGAGTACTCGTTGGGT.......................................................................................................... 25 0 20 0.05 1 1 0 0 0
..............................................................................................................................GAGTGAGTACTCGTTGGGTTGTGAT.................................................................................................... 25 0 20 0.05 1 0 0 0 1
...........................................................................................................................AGTGAGTGAGTAATCGTTGGGTTGT....................................................................................................... 25 1 20 0.05 1 0 1 0 0
.............................................................................................................................TGAGTGAGTACTCGTTGGGTTGTGA..................................................................................................... 25 0 20 0.05 1 0 0 0 1
..........................................................................................................CTTGTTGAGAAAAAACAAGTGAGT......................................................................................................................... 24 0 20 0.05 1 0 1 0 0
.............................................................................................................GTTGAGAAAAAACAAGTGAGTGAG...................................................................................................................... 24 0 20 0.05 1 1 0 0 0
....................................................................TGTTAAGCTCTCCTTGTACAAGTCA.............................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0
............................................................................................................................GATAGTGAGTACTCGTTGGGTTGTGAT.................................................................................................... 27 2 20 0.05 1 1 0 0 0
........ATCACTCGTTCACTCGTTTT............................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
..........................................................................................................................AAGTGAGTGAGTACTCGTTGGGT.......................................................................................................... 23 0 20 0.05 1 0 1 0 0
..............................................................................................................TTGAGAAAAAACAAGTGAGTGAGTACT.................................................................................................................. 27 0 20 0.05 1 1 0 0 0
....................................................................TGTTAAGCTCTCCTTGTACAAGTCAA............................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0
.............................................................................CTCCTTGTACAAGTCAACGAGTCAAAT................................................................................................................................................... 27 0 20 0.05 1 0 0 1 0
..................................................................................TGTACAAGTCAACGAGTC....................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
...........................................................................................................TTGTTGAGAAAAAACAAGTGAGTGAG...................................................................................................................... 26 0 20 0.05 1 1 0 0 0
....................................................................TGTTAAGCTCTCCTTGTACAAGTCAAC............................................................................................................................................................ 27 0 20 0.05 1 0 1 0 0
............................................................................................................................GTTAGTGAGTACTCGTTGGGTTGT....................................................................................................... 24 1 20 0.05 1 0 1 0 0
.............................................................................................................GTTGAGAAAAAACAAGTGAGTGAGTA.................................................................................................................... 26 0 20 0.05 1 0 1 0 0
.....GTTATCACTCGTTCACTCGTTTTTT............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
..TTTGTTATCACTCGTTCACTCGTTTT............................................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0
..............................................................................................................TTGAGAAAAAACAAGTGAGTGA....................................................................................................................... 22 0 20 0.05 1 1 0 0 0
................................................................TTCTTGTTAAGCTCTCCTTGTACAAGT................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0
................................................................................................................GAGAAAAAACAAGTGAGTGAGTACTCGT............................................................................................................... 28 0 20 0.05 1 0 1 0 0
....TGTTATCACTCGTTCACTCGTTTTTTCT........................................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0
...............................................................................................................TGAGAAAAAACAAGTGAGTGAGTACTC................................................................................................................. 27 0 20 0.05 1 0 1 0 0
...TTGTTATCACTCGTTCACTCGTTTT............................................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0
..........CACTCGTTCACTCGTTTTTTCT........................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
..........................................................................................................................AAGTGAGTGAGTACTCGTTGGGTT......................................................................................................... 24 0 20 0.05 1 1 0 0 0
...................................................................................................................AAAAAACAAGTGAGTGAGTACTCGT............................................................................................................... 25 0 20 0.05 1 0 1 0 0
.................................................................................TTGTACAAGTCAACGAGTCAA..................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
...........................................................................................................................AGTGAGTGAGTGCTCGTTGGGTTGT....................................................................................................... 25 1 20 0.05 1 0 1 0 0
........ATCACTCGTTCACTCGTTTTTTCT........................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.............................................................................................................GTTGACAAAAAACAAGTGAGTGAGT..................................................................................................................... 25 1 20 0.05 1 1 0 0 0
........................................................................................................................................................................................................................GCGCCACCTTGACGTTTCG................ 19 3 20 0.05 1 1 0 0 0
...........ACTCGTTCACTCGTTTTTTCTTG......................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
...........................................................................................................TTGTTGAGATAAAACCGGTG............................................................................................................................ 20 3 20 0.05 1 0 0 0 1
........ATCACTCGTTCACTCGTTTTTTCTT.......................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
...................................................................................GTACAAGTCAACGAGTCAAAT................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
..........................................................................................................................AAGTGAGTGAGTACTCGTTGGGTTGT....................................................................................................... 26 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004515:3850044-3850294 + dwi_1109 GTT-AAC-----------------------AATAGTGAGC-AAGTGAGCAAAAAAGAAC-TAGTGAGCAATAAAGA-ACAATTGAGCAAAAAAGA----ACAATTCGAGAGGAACATGTTCAGTTGCTCAGTTTAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTACTTTCTGCGTCTTC--TTCACCTGACT-------------------AATTCTTCTTTCTGCTTTCTCCTAGATTTGCAGTTTGCTGCGCGGTGGAATTGCCGAGCGGGGGGGTGTACGTGT
droVir3 scaffold_12963:14365539-14365673 - TGTGAAC-----------------------AG--ACGAAT-AAC-------------------TGATCAACAGTGA-ACAGCTGAGCTGGAAGAAAAAAACAATAAGAACGGAACACGCTCGATAGTTCATTTCAGTGAGCAACACTTT-TTTGTTCACTTACTCGTGA-GCAACCCATCACT--------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6541:2249691-2249825 + GTG-AGC-----------------------TATAGTGAGC-AAGTG-------------------AGCAAAAAAGA-ACAAGTGAGCAATAAAGA----ACAATTCGAGAGGAACATGTTCAGTTGCTCAGTTTAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTATT-----------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:5369636-5369706 + GTT-AGG-----------------------AATAATAAGC-AAGCAAGCAAAAAAAAA----ATAAATAAATAAAT-AGAGATAGAGATAAAAAG----ACAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1e:9864983-9865191 + AAA-GTG-----------------------AGTAGAGAAC-AAGTAAGGAAAAATTAAC-TAGTGAACAAAATAGA-ACAAGTGAGCAAAAAATA----ACAGTTTTGAAGAAACAAGTTCAGTTGCTCACATAAGTGAACAACTCTTT-T-TTTTCACTCACTCATGAGGCAACACAACACTAATCTGTAC--CATC--CATACCCAACAAGATTTCTTTCTAAAGTGTTTTTTTACA---CAGTTGC--------------------------------------------------------
droPer2 scaffold_1:1414413-1414595 + GTG-AAC-----------------------AACAAAGAAC-AAGTGAGCAAAAAAGAAC-GAGTGAACAACAAAGA-ACAAGTGAACAAAAAAGA----ACAGCTTGGAAGGAACATGTTCAGTTGCTCACTTAAGTGAACAACTATTT-TTTGTTCACTCACTCATGA-GCAACACAACACTATCGTCGGCTGTTAC--TCCACATGAC------------------------CTTTTTT-------C--------------------------------------------------------
droAna3 scaffold_12905:505122-505264 + CTA-AGC-----------------------A--------C-AAATGAACAAAAATGAGC-AAGTGAGCAAAAATGA-GCAAGTGAACAAAAAAGA----ACAAAAAGGAAGGAACATGTTCACTCGCTCAGTTGAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTA-------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000393604:2551-2694 - GTG-AAC-----------------------AAAAATGAAC-AAGTGAACAAAAA---------TGAGCAAAAATGA-GCAAGTGAACAAAAAAGA----ACAAAAAGGAAGGAACCAGTTCGCTCACTCAGTTGAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTAC------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302808:817742-817902 - TAA-GGATGGAGGATAAGTGAAGCAAATGAAAAATTGAATTGGAGAAATTA-------------GAACA--ATTTA-GAATTAGAACAAATAAAA-AAAACAATTAGAAAGGATCATGCTCACTTGCTTATTGAAGTAAACCGCTCTTTTTTTGTTCACTTACTCC--A-GCTACCCAACAC---------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000452663:10118-10248 + TTA--GC-----------------------AA--ATGAGC-AAG-------------------TGAGCAAAAATGA-GCAAATGAACAATAAAGA----ACTAAAAGGAAGGAATATATTCGCTCGCTCAGTTTAGTGAGCAACTCTTT-TTTGTTCACTCACTCATGA-GCAACACAACACTAC------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491199:505456-505594 + GTG-AAC-----------------------AA--TTGAAC-AAGTGAGCAA--CTGAAC-AAGTGAGTT--ACTGA-GCAAGTGAGCAAAAAAAC----ACAATTATTTAG------TTTCACTCACTCACTTAAGTGAACAACTCTTT-TTTGTTCACTCATTCATGA-GCAACCCAACTCTA-------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000769164:491-668 - GTG-AAC-----------------------AAAAAGGAGC-AAGTGAACAAAAAAGAGC-AAGTGAGCAAAAATGA-ACAAGTGAACAAAAAAGA----ACAAGTTCGAAGGAACACGTTCACTCACTCAGTTCTGTGAGCAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTACCTCATACAGACCCATTTCACTTAACT----------------------------------------------------------------------------------------------
droBia1 scf7180000301518:1313066-1313216 - GAG-CAC-----------------------CAAATTAAGC-AAGTGAACAAAAG-AAGC-AAACGGACAAAAATGA-TAAGGCGAACACTACAGT----ACACATGAAAGGGAACATGTTCACCTTTTCAGTTTAGTGAAACAATT-TT-TTTCCTCCCTAACTCATGT-CCAGCCCAACACTGCT-----------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412653:18089-18287 + ATA-AGAGAGA-------------------CAAACTGAAC-AAGTGAACAAAAAAGAGC-AAGTGAGCAAAAATGA-ACAAGTGAACAATAAAGA----ACAAGTTCGAAGGAACATGTTCACTCACTCAGTTTAGTGAGCAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTACTCCTCATATATCCATCTCGTTGGT---------------------TTTTCAACTCTTCGATTTC--------------------------------------------------------
droEug1 scf7180000405574:17604-17719 + T-----------------------------------GATA-AAGTG-------------------ACCAAAAAAGA-GGATGTTAACAATAAAGA----ATAAATGGGAATCAAAA-----AATCGCTCAGTTCAGTAAATAGC-CTTT-TTTGATCACTCGCTCATAA-GCTCGCCAACCCTA-------------------------------------------------------------------------------------------------------------------------
dm3 chrUextra:283851-283971 - GCT-TACA-AC-------------------TGTATTGAAC--------------------------------------TAAGTGAACTATATTGA----GCTATAAAGACAGACGTAGTTCGTTCGTTCAGTTTGGCGAATAGTTCAAT-TTAGTTCGTTCGTTCACGA-ACGACACAACACTGTT-----------------------------------------------------------------------------------------------------------------------
droSim2 2r:273587-273742 - GTG-AAC-----------------------TATATTGAACTAAATGAACTATATTAAACTAAGTGAACTAAATTAA-ACAAACGAACTATATTGA----ACTATAAAAAAAGACCTAGTTCGTTCGTTCAGTTTGGTAAATAGTTCAAT-TTAGTTCGTTCGTTCACGA-ACGACACAACACTAGTT----------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:20423801-20423951 - GTG-AAC-----------------------TATATTGAACTAAG-------------------TGAACTAAATTGA-ACTATCGAACTATATTGA----ACTATAAAGGCAGACCTAGTTCGTTCGTTCAGTTTGGTGAATAGTTCAAT-TTAGTTCGTTCGTTCACGA-ACGACACAACACTACTTCATATGCACTTCTT--------------------------------------------------------------------------------------------------------
droYak3 X:3441496-3441581 - GCG-GAT-----------------------AAAAGTGTGC-TTGTGCCCAGAAAAGAAG-TAGCAAAAAAATAAAAAAAACGGGAGAAAAAAAGG----AAAAGAATGGGGAAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:7836515-7836611 + TTT-TTC-----------------------CGTGT------------------------------------------------------------------------------------------TCCTAATCATATG-------------------------------------------------------TATCTATTTTATCTGATC---------------------TGCAGA------------------TCTGCAGTCTTTTGCGTGGAGGAATCGCTGAGCGGGGCGGAGTACGCGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GTT-AAC-----------------------AATAGTGAGC-AAGTGAGCAAAAAAGAAC-TAGTGAGCAATAAAGA-ACAATTGAGCAAAAAAGA----ACAATTCGAGAGGAACATGTTCAGTTGCTCAGTTTAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTACTTTCTGCGTCTTC--TTCACCTGACT-------------------AATTCTTCTTTCTGCTTTCTCCTAGATTTGCAGTTTGCTGCGCGGTGGAATTGCCGAGCGGGGGGGTGTACGTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCT.................................................................................................................................................................................25201.25250100141
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGC..................................................................................................................................................................................24200.6513110110
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACACTA.........................................................................................................................28200.551104070
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACAC...........................................................................................................................26200.35705020
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCTC................................................................................................................................................................................26200.30605010
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACA............................................................................................................................25200.30605010
............................................................................................................................................................CACTCACTCATGA-GCAACCCAACACTA.........................................................................................................................27200.25504010
.......................................................................................................TTCGAGAGGAACATGTTCAGTTG...................................................................................................................................................................................23200.25505000
..........................................................................................................................................................TTCACTCACTCATGA-GCAACCCAACACTA.........................................................................................................................29200.20403010
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACCCAA..............................................................................................................................26200.20404000
.............................................................................................................................................................ACTCACTCATGA-GCAACCCAACACTA.........................................................................................................................26200.15300030
...............................................................................................................................................................TCACTCATGA-GCAACCCAACACTA.........................................................................................................................24200.15303000
...............................................................................................................................................................TCACTCATGA-GCAACCCAACAC...........................................................................................................................22200.15301020
...................................................................................................................................................TT-TTTGTTCACTCACTCATGA-GCAACC.................................................................................................................................27200.15303000
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCTCA...............................................................................................................................................................................27200.10202000
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACCCA...............................................................................................................................25200.10202000
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAAC.............................................................................................................................24200.10202000
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACACT..........................................................................................................................27200.10201010
................................................................................................................................................TCTTT-TTTGTTCACTCACTCATGA-GCA....................................................................................................................................27200.10201010
....................................................................................................................................................T-TTTGTTCACTCACTCATGA-GCAACC.................................................................................................................................26200.10202000
....................................................................................................CAATTCGAGAGGAACATGTTCAGT.....................................................................................................................................................................................24200.10202000
......................................................................................................................................................TTTGTTCACTCACTCATGA-GCAACCC................................................................................................................................26200.10202000
................................................................................................................................................................CACTCATGA-GCAACCCAACACTA.........................................................................................................................23200.10201010
....................................................................................................................................TTAGTGAACAACTCTTT-TTTGTTCA...................................................................................................................................................25120.08101000
.............................................................................................................................GCTCAGTTTAGTGAACAACTCTTT-T..........................................................................................................................................................25130.08101000
............................................................................................................................TGCTCAGTTTAGTGAACAACTCTTT-T..........................................................................................................................................................26130.08101000
....................................................................................................................TGTTCAGTTGCTCAGTTTAGTGAA.....................................................................................................................................................................24150.07100010
...............................................................................................................GAACATGTTCAGTTGCTCAGTTTAGT........................................................................................................................................................................26160.06100010
.......................................................................................................................TCAGTTGCTCAGTTTAGTGAA.....................................................................................................................................................................21160.06100010
...................................................................................................................ATGTTCAGTTGCTCAGTTTAGT........................................................................................................................................................................22170.06100010
.....................................................................................................................GTTCAGTTGCTCAGTTTAGTG.......................................................................................................................................................................21170.06100010
.......................................................................................................................TCAGTTGCTCAGTTTAGTGA......................................................................................................................................................................20180.06100010
.........................................................................................................................................................GTTCACTCACTCATGA-GCAAC..................................................................................................................................21200.05101000
............................................................................................................................................................CACTCACTCATGA-GCAACCCAACACT..........................................................................................................................26200.05101000
.....AC-----------------------AATAGTGAGC-AAGTGAGC................................................................................................................................................................................................................................................................20200.05100010
..........................................................................................................................................................TTCACTCACTCATGA-GCAACCCA...............................................................................................................................23200.05100010
............................................................................................................................................CAACTCTTT-TTTGTTCACTCACTCA...........................................................................................................................................25200.05101000
.........................................................................................................................................................GTTCACTCACTCATGA-GCAACCCAACA............................................................................................................................27200.05101000
............................................................................................................................................CAACTCTTT-TTTGTTCACTCACTC............................................................................................................................................24200.05101000
........................................................................................................TCGAGAGGAACATGTTCAGTTGC..................................................................................................................................................................................23200.05101000
..........................................................................................................GAGAGGAACATGTTCAGTTGCT.................................................................................................................................................................................22200.05101000
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACCCAACA............................................................................................................................28200.05101000
..............................................................................................................................................................CTCACTCATGA-GCAACCCAACACT..........................................................................................................................24200.05101000
.............................................................................................GA----ACAATTCGAGAGGAACATGTTCAG......................................................................................................................................................................................26200.05101000
....................................................................................................CAATTCGAGAGGAACATGTTCAGTTGC..................................................................................................................................................................................27200.05101000
.............................................................................................................................................AACTCTTT-TTTGTTCACTCACTC............................................................................................................................................23200.05101000
..........................................................................................AAAGA----ACAATTCGAGAGGAACATGT..........................................................................................................................................................................................25200.05101000
.....................................................................................................AATTCGAGAGGAACATGTTCA.......................................................................................................................................................................................21200.05101000
......................................................................................................................................................TTTGTTCACTCACTCATGA-GCAACC.................................................................................................................................25200.05101000
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACCCAAC.............................................................................................................................27200.05101000
............................................................................................................................................CAACTCTTT-TTTGTTCACTCA...............................................................................................................................................21200.05101000
........................................................................................................TCGAGAGGAACATGTTCAGTTG...................................................................................................................................................................................22200.05101000
.......................................................................................................TTCGAGAGGAACATGTTCAGTT....................................................................................................................................................................................22200.05101000
..........................................................................................................................................................TTCACTCACTCATGA-GCAACCCAACAC...........................................................................................................................27200.05101000
.............................................................................................................................................................ACTCACTCATGA-GCAACCCAA..............................................................................................................................21200.05101000
...............................................................................................................................................................TCACTCATGA-GCAACCCAACACT..........................................................................................................................23200.05101000
..............................................................................................................................................ACTCTTT-TTTGTTCACTCACT.............................................................................................................................................21200.05100010
......................................................................................................ATTCGAGAGGAACATGTTCAGTTG...................................................................................................................................................................................24200.05101000
.............................................................................................................................................AACTCTTT-TTTGTTCACTCACTCAT..........................................................................................................................................25200.05101000
.................................................................................................................................................CTTT-TTTGTTCACTCACTCATGA-.......................................................................................................................................23200.05101000
...........................................................................................AAGA----ACAATTCGAGAGGAACATGTT.........................................................................................................................................................................................25200.05101000
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACCCAACAC...........................................................................................................................29200.05101000
....................................................................................................CAATTCGAGAGGAACATGTTCAG......................................................................................................................................................................................23200.05101000
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCTCT...............................................................................................................................................................................27200.05101000
........................................................................................................TCGAGAGGAACATGTTCAGTTGCT.................................................................................................................................................................................24200.05101000
..................................................................................................................................................TTT-TTTGTTCACTCACTCATG.........................................................................................................................................21200.05101000
......................................................................................................................................................TTTGTTCACTCACTCATGA-GCAACCCAA..............................................................................................................................28200.05101000
......................................................................................................................................................TTTGTTCACTCACTCATGA-GCAACCCA...............................................................................................................................27200.05101000
........................................................................................................................................................TGTTCACTCACTCATGA-GCA....................................................................................................................................20200.05100010
................................................................................................................................................TCTTT-TTTGTTCACTCACTCATGA-GC.....................................................................................................................................26200.05101000
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCTT................................................................................................................................................................................26200.05100010
...........................................................................................................................................................TCACTCACTCATGA-GCAACC.................................................................................................................................20200.05101000
droVir3
TGTGAAC-----------------------AG--ACGAAT-AAC-------------------TGATCAACAGTGA-ACAGCTGAGCTGGAAGAAAAAAACAATAAGAACGGAACACGCTCGATAGTTCATTTCAGTGAGCAACACTTT-TTTGTTCACTTACTCGTGA-GCAACCCATCACT--------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GTG-AGC-----------------------TATAGTGAGC-AAGTG-------------------AGCAAAAAAGA-ACAAGTGAGCAATAAAGA----ACAATTCGAGAGGAACATGTTCAGTTGCTCAGTTTAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTATT-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................TAAAGA----ACAATTCGAGAGGAACATGT..........................................................................................................................................................................................26351.671551114012910
.........................................................................................TAAAGA----ACAATTCGAGAGGAACATG...........................................................................................................................................................................................25338.0011498100132
......................................................................AAAAGA-ACAAGTGAGCAATAAAGA----AC............................................................................................................................................................................................................26215.003017000103
......................................................................AAAAGA-ACAAGTGAGCAATAAAGA----..............................................................................................................................................................................................................2425.0010900001
......................................................................AAAAGA-ACAAGTGAGCAATAAAGA----A.............................................................................................................................................................................................................2524.008600011
.........................................................................................TAAAGA----ACAATTCGAGAGGAACATGTT.........................................................................................................................................................................................2734.0012900012
..........................................................................................AAAGA----ACAATTCGAGAGGAACATGT..........................................................................................................................................................................................2533.3310900010
...........................................................................................................................TTGCTCAGTTTAGTGAACAACTCTT.............................................................................................................................................................2532.337400030
.......................................................................................................................TCAGTTGCTCAGTTTAGTGAACAAC.................................................................................................................................................................2532.337000070
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACAC...........................................................................................................................2632.337500020
......................................................................AAAAGA-ACAAGTGAGCAATAAAGA----ACA...........................................................................................................................................................................................................2722.004210001
.........................................................................................TAAAGA----ACAATTCGAGAGGAACA.............................................................................................................................................................................................2332.006100050
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCT.................................................................................................................................................................................2531.675210020
......................................................................................................................TTCAGTTGCTCAGTTTAGTGAACAAC.................................................................................................................................................................2631.675000050
...................................................................................................................................TTTAGTGAACAACTCTTT-TTTGTTCA...................................................................................................................................................2621.503300000
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACACT..........................................................................................................................2731.334110020
......................................................................AAAAGA-ACAAGTGAGCAATAAAGA----ACAA..........................................................................................................................................................................................................2821.002100010
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACCCAACAC...........................................................................................................................2921.002100010
.......................................................................AAAGA-ACAAGTGAGCAATAAAGA----AC............................................................................................................................................................................................................2531.003300000
..................................................................................TGAGCAATAAAGA----ACAATTCGAGAGG.................................................................................................................................................................................................2611.001000010
...........................................................................................................................TTGCTCAGTTTAGTGAACAACTCTTT-...........................................................................................................................................................2631.003200010
......................................................................AAAAGA-ACAAGTGAGCAATA......................................................................................................................................................................................................................2021.002100010
......................................................................AAAAGA-ACAAGTGAGCAATAAAG...................................................................................................................................................................................................................2321.002200000
.........................................................................................TAAAGA----ACAATTCGAGAGGAACATGC..........................................................................................................................................................................................2631.003000030
..................................................................................TGAGCAATAAAGA----ACAATTCGAGAGGAAC..............................................................................................................................................................................................2911.001100000
...............................................................................................................................................................TCACTCATGA-GCAACCCAACACTAT........................................................................................................................2511.001100000
..........................................................................................................................................................TTCACTCACTCATGA-GCAACCCAACAC...........................................................................................................................2731.003200010
...............................................................................................................................................................TCACTCATGA-GCAACCCAACACTATT-----------------------------------------------------------------------------------------------------------------------2611.001100000
..........................................................................................AAAGA----ACAATTCGAGAGGAACATG...........................................................................................................................................................................................2431.003300000
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACA............................................................................................................................2530.672100010
..........................................AGTG-------------------AGCAAAAAAGA-ACAAGTGAGC..........................................................................................................................................................................................................................2530.672100010
....................................................................................................CAATTCGAGAGGAACATGTTCAGTTGC..................................................................................................................................................................................2730.672000020
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAAC.............................................................................................................................2430.672200000
.........................................................................................TAAAGA----ACAATTCGAGAGGAACAT............................................................................................................................................................................................2430.672200000
.....................................................................................................AATTCGAGAGGAACATGTTCAGTTGC..................................................................................................................................................................................2630.672200000
.........................................................................................TAAAGA----ACAATTCGAGAGGAAC..............................................................................................................................................................................................2230.672100010
.......................................................................................................................................................TTGTTCACTCACTCATGA-GCAACC.................................................................................................................................2420.501000010
.....................................................................AAAAAGA-ACAAGTGAGCAAT.......................................................................................................................................................................................................................2020.501100000
................................................................................................................................................TCTTT-TTTGTTCACTCACTCATG.........................................................................................................................................2320.501100000
......................................................................................................................................................TTTGTTCACTCACTCATGA-GCAACCC................................................................................................................................2620.501000010
...............................................................................................................................TCAGTTTAGTGAACAACTCTTT-TTTGA......................................................................................................................................................2720.501100000
...................................................................CAAAAAAGA-ACAAGTGAGCAATAAAGA----AC............................................................................................................................................................................................................2920.501100000
.............................................................................................................................................AACTCTTT-TTTGTTCACTCAC..............................................................................................................................................2120.501000010
.....................................................................AAAAAGA-ACAAGTGAGCAATAAAGA----ACA...........................................................................................................................................................................................................2820.501100000
.............................................G-------------------AGCAAAAAAGA-ACAAGTGAGCAATA......................................................................................................................................................................................................................2620.501100000
..............................................................................................................................CTCAGTTTAGTGAACAACTCT..............................................................................................................................................................2130.331100000
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGC..................................................................................................................................................................................2430.331100000
.......................................C-AAGTG-------------------AGCAAAAAAGA-ACAAGTGAGCA.........................................................................................................................................................................................................................2830.331100000
............................................................................................................................TGCTCAGTTTAGTGAACA...................................................................................................................................................................1830.331100000
..........................................................................................AAAGA----ACAATTCGAGAGGAACA.............................................................................................................................................................................................2230.331100000
....................................................................................................CAATTCGAGAGGAACATGTTCAGT.....................................................................................................................................................................................2430.331000010
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCTC................................................................................................................................................................................2630.331100000
................................TAGTGAGC-AAGTG-------------------AGCAAAAAAG......................................................................................................................................................................................................................................2330.331100000
........................................................................................................TCGAGAGGAACATGTTCAGTTG...................................................................................................................................................................................2230.331100000
............................................................................................................................TGCTCAGTTTAGTGAACAACTCTTT-...........................................................................................................................................................2530.331100000
.............................................................................ACAAGTGAGCAATAAAGA----ACA...........................................................................................................................................................................................................2130.331100000
.............................................................................................GA----ACAATTCGAGAGGAACATG...........................................................................................................................................................................................2130.331100000
.........................................................................................TAAAGA----ACAATTCGAGAGGAACATTG..........................................................................................................................................................................................2630.331100000
.....................................................................................................AATTCGAGAGGAACATGTTCAGTTG...................................................................................................................................................................................2530.331100000
.......................................................................................................TTCGAGAGGAACATGTTCAGTTGCTCA...............................................................................................................................................................................2730.331100000
..................................................................................................................CATGTTCAGTTGCTCAGTTTAGTG.......................................................................................................................................................................2430.331100000
..........................................................................................................................................................TTCACTCACTCATGA-GCAACCCAACACTA.........................................................................................................................2930.331100000
.......................................................................AAAGA-ACAAGTGAGCAATAAAGA----..............................................................................................................................................................................................................2330.331100000
...............................................................................................................................TCAGTTTAGTGAACAACTCTT.............................................................................................................................................................2130.331000010
........................................................................................ATAAAGA----ACAATTCGAGAGGAACATG...........................................................................................................................................................................................2630.331100000
.........................................................................AGA-ACAAGTGAGCAATAAAGA----AC............................................................................................................................................................................................................2330.331100000
...................................TGAGC-AAGTG-------------------AGCAAAAAAGA-ACAAGTG.............................................................................................................................................................................................................................2830.331100000
...........................................................................................................................TTGCTCAGTTTAGTGAACAAC.................................................................................................................................................................2130.331100000
...............................................................................................................................................................TCACTCATGA-GCAACCCAACACT..........................................................................................................................2330.331100000
...........................................................................................................................................................TCACTCACTCATGA-GCAACCC................................................................................................................................2130.331000010
...........................................................................................................................................................TCACTCACTCATGA-GCAACCCAACACC..........................................................................................................................2730.331000010
....................................................................................................CAATTCGAGAGGAACATGTTCAGTTG...................................................................................................................................................................................2630.331100000
................................TAGTGAGC-AAGTG-------------------AGCAAAAAAGA-ACA.................................................................................................................................................................................................................................2730.331100000
..........................................................................................AAAGA----ACAATTCGAGAGGAACATGTT.........................................................................................................................................................................................2630.331100000
...........................................................................................AAGA----ACAATTCGAGAGGAACAT............................................................................................................................................................................................2230.331100000
.........................................................................................TAAAGA----ACAATTCGAGAGGAACATGTTC........................................................................................................................................................................................2830.331100000
.....................................................................................................AATTCGAGAGGAACATGT..........................................................................................................................................................................................1830.331000010
......................................................................AAAAGA-ACAAGTGAGCAC........................................................................................................................................................................................................................1840.251000010
.............................................G-------------------AGCAAAAAAGA-ACAAGTGAGC..........................................................................................................................................................................................................................2240.251100000
...........................................................................A-ACAAGTGAGCAATAAAGA----..............................................................................................................................................................................................................1940.251100000
droGri2
GTT-AGG-----------------------AATAATAAGC-AAGCAAGCAAAAAAAAA----ATAAATAAATAAAT-AGAGATAGAGATAAAAAG----ACAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
AAA-GTG-----------------------AGTAGAGAAC-AAGTAAGGAAAAATTAAC-TAGTGAACAAAATAGA-ACAAGTGAGCAAAAAATA----ACAGTTTTGAAGAAACAAGTTCAGTTGCTCACATAAGTGAACAACTCTTT-T-TTTTCACTCACTCATGAGGCAACACAACACTAATCTGTAC--CATC--CATACCCAACAAGATTTCTTTCTAAAGTGTTTTTTTACA---CAGTTGC--------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................TGAACAAAATAGA-ACAAGTGAGCAAAAA.....................................................................................................................................................................................................................2822.0040000000040
...............................................................TGAACAAAATAGA-ACAAGTGAGCAAA.......................................................................................................................................................................................................................2621.0020000000020
.............................................................................................TA----ACAGTTTTGAAGAAACAAGTTCAGT.....................................................................................................................................................................................2711.0010000001000
...............................................................................................................................................................TCACTCATGAGGCAACACAACAC...........................................................................................................................2311.0010100000000
........................................................................TAGA-ACAAGTGAGCAAAAAA....................................................................................................................................................................................................................2020.5010100000000
...............................................................TGAACAAAATAGA-ACAAGTGAGC..........................................................................................................................................................................................................................2320.5010000000100
droPer2
GTG-AAC-----------------------AACAAAGAAC-AAGTGAGCAAAAAAGAAC-GAGTGAACAACAAAGA-ACAAGTGAACAAAAAAGA----ACAGCTTGGAAGGAACATGTTCAGTTGCTCACTTAAGTGAACAACTATTT-TTTGTTCACTCACTCATGA-GCAACACAACACTATCGTCGGCTGTTAC--TCCACATGAC------------------------CTTTTTT-------C--------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................TCACTCACTCATGA-GCAACACAACAC...........................................................................................................................26200.255050000
........................................................................................AAAAAGA----ACAGCTTGGAAGGAACATGT..........................................................................................................................................................................................27170.183000003
..G-AAC-----------------------AACAAAGAAC-AAGT....................................................................................................................................................................................................................................................................18200.153300000
................................................................GAACAACAAAGA-ACAAGT..............................................................................................................................................................................................................................18200.153300000
........................................................................................AAAAAGA----ACAGCTTGGAAGGAACATG...........................................................................................................................................................................................26170.122000002
...................................................................................................ACAGCTTGGAAGGAACATGTTCAG......................................................................................................................................................................................24190.112000002
..............................AACAAAGAAC-AAGTGAGCAAAAAAGA........................................................................................................................................................................................................................................................26200.102000002
........................................................................................AAAAAGA----ACAGCTTGGAAGGA................................................................................................................................................................................................21200.102000002
.........................................................................................AAAAGA----ACAGCTTGGAAGGAA...............................................................................................................................................................................................21200.102000002
......................................................................................................GCTTGGAAGGAACATGTTCAGTTGCTCA...............................................................................................................................................................................28200.102000002
........................................................................AAGA-ACAAGTGAACAAAAAAGA----ACAGCT........................................................................................................................................................................................................28130.081010000
.........................................................................................AAAAGA----ACAGCTTGGAAGGAACATG...........................................................................................................................................................................................25170.061000001
..........................................................................................AAAGA----ACAGCTTGGAAGGAACATGT..........................................................................................................................................................................................25180.061000001
.......................................................................................AAAAAAGA----ACAGCTTGGAAGG.................................................................................................................................................................................................21190.051000001
..............................................................................................A----ACAGCTTGGAAGGAACATG...........................................................................................................................................................................................20190.051000001
.......................................................................................AAAAAAGA----ACAGCTTGGAAGGAA...............................................................................................................................................................................................23190.051000001
...............................................................TGAACAACAAAGA-ACAAGT..............................................................................................................................................................................................................................19200.051100000
..........................................................................................................................................................TTCACTCACTCATGA-GCAACACAACACT..........................................................................................................................28200.051010000
..........................................................................................................................................................TTCACTCACTCATGA-GCAACACAACAC...........................................................................................................................27200.051010000
...................................................................................................ACAGCTTGGAAGGAACATGA..........................................................................................................................................................................................20200.051000001
...................................................................CAACAAAGA-ACAAGTGAACAAAAAAGA----A.............................................................................................................................................................................................................28200.051100000
..........................................................................................AAAGA----ACAGCTTGGAAGGAAC..............................................................................................................................................................................................21200.051000001
................................CAAAGAAC-AAGTGAGCAAA.............................................................................................................................................................................................................................................................19200.051000001
......C-----------------------AACAAAGAAC-AAGTGAGC................................................................................................................................................................................................................................................................19200.051010000
...............................................................TGAACAACAAAGA-ACAAGTGAACA.........................................................................................................................................................................................................................24200.051010000
....................................................................................................................................................T-TTTGTTCACTCACTCATGA-GCAAC..................................................................................................................................25200.051010000
.............................................................................................................................................................ACTCACTCATGA-GCAACACAACACT..........................................................................................................................25200.051010000
..........................................................................................................GGAAGGAACATGTTCAGTTGCTCACT.............................................................................................................................................................................26200.051010000
........................................................................................................................................................TGTTCACTCACTCATGA-GCAACACAACAC...........................................................................................................................29200.051010000
..........................................................................GA-ACAAGTGAACAAAAAAGA----ACA...........................................................................................................................................................................................................23200.051010000
.......................................................................AAAGA-ACAAGTGAACAAAAAA....................................................................................................................................................................................................................21200.051100000
................................................................................................................AACATGTTCAGTTGCTCACTTAAG.........................................................................................................................................................................24200.051001000
......C-----------------------AACAAAGAAC-AAGTGAGCAAAA............................................................................................................................................................................................................................................................23200.051000001
.....AC-----------------------AACAAAGAAC-AAGTGAGCAAAAAAGA........................................................................................................................................................................................................................................................28200.051010000
droAna3
CTA-AGC-----------------------A--------C-AAATGAACAAAAATGAGC-AAGTGAGCAAAAATGA-GCAAGTGAACAAAAAAGA----ACAAAAAGGAAGGAACATGTTCACTCGCTCAGTTGAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTA-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................AAAAAGGAAGGAACATGTTCACTCGC..................................................................................................................................................................................2621.002000020
..........................................................................................AAAGA----ACAAAAAGGAAGGAACATG...........................................................................................................................................................................................2411.001100000
..........................................................................................AAAGA----ACAAAAAGGAAGGAACAT............................................................................................................................................................................................2311.001100000
...........................................................................................AAGA----ACAAAAAGGAAGGA................................................................................................................................................................................................1811.001010000
...................................................................................................ACAAAAAGGAAGGAACACC...........................................................................................................................................................................................1950.201010000
droBip1
GTG-AAC-----------------------AAAAATGAAC-AAGTGAACAAAAA---------TGAGCAAAAATGA-GCAAGTGAACAAAAAAGA----ACAAAAAGGAAGGAACCAGTTCGCTCACTCAGTTGAGTGAACAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTAC------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TAA-GGATGGAGGATAAGTGAAGCAAATGAAAAATTGAATTGGAGAAATTA-------------GAACA--ATTTA-GAATTAGAACAAATAAAA-AAAACAATTAGAAAGGATCATGCTCACTTGCTTATTGAAGTAAACCGCTCTTTTTTTGTTCACTTACTCC--A-GCTACCCAACAC---------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTA--GC-----------------------AA--ATGAGC-AAG-------------------TGAGCAAAAATGA-GCAAATGAACAATAAAGA----ACTAAAAGGAAGGAATATATTCGCTCGCTCAGTTTAGTGAGCAACTCTTT-TTTGTTCACTCACTCATGA-GCAACACAACACTAC------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GTG-AAC-----------------------AA--TTGAAC-AAGTGAGCAA--CTGAAC-AAGTGAGTT--ACTGA-GCAAGTGAGCAAAAAAAC----ACAATTATTTAG------TTTCACTCACTCACTTAAGTGAACAACTCTTT-TTTGTTCACTCATTCATGA-GCAACCCAACTCTA-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTG-AAC-----------------------AAAAAGGAGC-AAGTGAACAAAAAAGAGC-AAGTGAGCAAAAATGA-ACAAGTGAACAAAAAAGA----ACAAGTTCGAAGGAACACGTTCACTCACTCAGTTCTGTGAGCAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTACCTCATACAGACCCATTTCACTTAACT----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GAG-CAC-----------------------CAAATTAAGC-AAGTGAACAAAAG-AAGC-AAACGGACAAAAATGA-TAAGGCGAACACTACAGT----ACACATGAAAGGGAACATGTTCACCTTTTCAGTTTAGTGAAACAATT-TT-TTTCCTCCCTAACTCATGT-CCAGCCCAACACTGCT-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATA-AGAGAGA-------------------CAAACTGAAC-AAGTGAACAAAAAAGAGC-AAGTGAGCAAAAATGA-ACAAGTGAACAATAAAGA----ACAAGTTCGAAGGAACATGTTCACTCACTCAGTTTAGTGAGCAACTCTTT-TTTGTTCACTCACTCATGA-GCAACCCAACACTACTCCTCATATATCCATCTCGTTGGT---------------------TTTTCAACTCTTCGATTTC--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
T-----------------------------------GATA-AAGTG-------------------ACCAAAAAAGA-GGATGTTAACAATAAAGA----ATAAATGGGAATCAAAA-----AATCGCTCAGTTCAGTAAATAGC-CTTT-TTTGATCACTCGCTCATAA-GCTCGCCAACCCTA-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCT-TACA-AC-------------------TGTATTGAAC--------------------------------------TAAGTGAACTATATTGA----GCTATAAAGACAGACGTAGTTCGTTCGTTCAGTTTGGCGAATAGTTCAAT-TTAGTTCGTTCGTTCACGA-ACGACACAACACTGTT-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....TACA-AC-------------------TGTATTGAAC--------------------------------------TAAGT..............................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGGCGAATAGTTCAAT-TTAG.......................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000001000000000000000001000
....................................................................................................................................TTGGCGAATAGTTCAAT-TTAGT......................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000001000000000000000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................21122.42290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000200000100000006000300000000010000100000000300000000000000002000000000000000402000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGT..............................................................................................................................................2242.2590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000100020000000000000000000000000000111010
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2341.7570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000110000000000200000000000000000000000000001000000000000000000000
.............................................................................................................................................AGTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................22121.42170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010100000004000010000000000020100000000000000000000000001000010000000000102010
...................................................................................................................................TTTGGCGAATAGTTCAAT-T..........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................CTATATTGA----GCTATAAAGACAG.................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGGCGAATAGTTCAAT-TT.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTCGTTCGTTCAGTTTGGCGAA.....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................TCGTTCGTTCAGTTTGGCGAATA...................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCG...............................................................................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000002000000000000000
........................................................................................ATATTGA----GCTATAAAGACAGACG..............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......A-AC-------------------TGTATTGAAC--------------------------------------TAAGT..............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGG.........................................................................................................................................................................21140.79110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000100010000000000000000000000000010002000102000000000000010
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTTC............................................................................................................................................22110.7380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000002000000000000000020000000000200000000000000000000000000000000100000
.................................ATTGAAC--------------------------------------TAAGTGAACTATATT....................................................................................................................................................................................................................2270.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTC............................................................................................................................................21110.3640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000003000
................................TATTGAAC--------------------------------------TAAGTGAACTATATTGA----GC............................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTGAAC--------------------------------------TAAGTGAACTATAT.....................................................................................................................................................................................................................2070.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TATTGAAC--------------------------------------TAAGTGAACTATA......................................................................................................................................................................................................................2180.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................GAATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................ATTGAAC--------------------------------------TAAGTGAACTATA......................................................................................................................................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTC.............................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTC................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAT-TTAGTTCGTTCGTTCAC..........................................................................................................................................20130.2330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000001000000000000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTTCA...........................................................................................................................................23110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTTA............................................................................................................................................22120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000
.............................................................................................................................................AGTTCAAT-TTAGTTCGTTCGT..............................................................................................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................T-TTAGTTCGTTCGTTCACGA-.......................................................................................................................................20130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...................................TGAAC--------------------------------------TAAGTGAACTATATT....................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TATTGAAC--------------------------------------TAAGTGAACTATATTG...................................................................................................................................................................................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTGAAC--------------------------------------TAAGTGAACTATATTGA----..............................................................................................................................................................................................................2370.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTGAAC--------------------------------------TAAGTGAACTATATT....................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATTGAAC--------------------------------------TAAGTGAACTAT.......................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................ATTGAAC--------------------------------------TAAGTGAACTA........................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTCAC..........................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................CAAT-TTAGTTCGTTCGTTCAC..........................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................TCAAT-TTAGTTCGTTCGTTCAC..........................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAT-TTAGTTCGTTCGTTCACGT-.......................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................AAT-TTAGTTCGTTCGTTCACGA-.......................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTAA............................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................................................................................................AAT-TTAGTTCGTTCGTTCACG.........................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCG...............................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................AAT-TTAGTTCGTTCGTTCACT.........................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
....................................................................................................................AGTTCGTTCGTTCAGTTTG..........................................................................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GTTCGTTCGTTCAGTTTGG.........................................................................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droSim2
GTG-AAC-----------------------TATATTGAACTAAATGAACTATATTAAACTAAGTGAACTAAATTAA-ACAAACGAACTATATTGA----ACTATAAAAAAAGACCTAGTTCGTTCGTTCAGTTTGGTAAATAGTTCAAT-TTAGTTCGTTCGTTCACGA-ACGACACAACACTAGTT----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAAT-T..........................................................................................................................................................27283.5016700000008810672000000
....................................................................................................................................TTGGTAAATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................27229.50590000006245231000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAAT-...........................................................................................................................................................26228.00560000000142364000000
.....................................................................................................TATAAAAAAAGACCTAGTTCGTTCGTT.................................................................................................................................................................................27216.0032000000275180000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAA.............................................................................................................................................................25215.0030000000052221000000
............................................................................................................................CGTTCAGTTTGGTAAATAGTTCAAT-T..........................................................................................................................................................26212.5025000000263140000000
.......................................................................................................TAAAAAAAGACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................29212.0024000000317310000000
.........................................................................................................AAAAAAGACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................27211.5023000000013181000000
.....................................................................................................TATAAAAAAAGACCTAGTTCGTTCGT..................................................................................................................................................................................26211.5023000000245120000000
..........................................................................................................................TTCGTTCAGTTTGGTAAATAGTTCAAT-T..........................................................................................................................................................28211.502300000018590000000
.....................................................................................................................................TGGTAAATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................26211.0022000000016240000000
......................................................TAAACTAAGTGAACTAAATTAA-ACAAA...............................................................................................................................................................................................................................27210.0020000000032150000000
.......................................................................................................TAAAAAAAGACCTAGTTCGTTCGTT.................................................................................................................................................................................2529.501900000026452000000
...........................................................................................................AAAAGACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2629.0018000000150120000000
................................................................................................................................................TCAAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2578.716100000013239160000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGGTAAA.....................................................................................................................................................................2528.5017000000011330000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2677.715400000014187150000000
........................................TAAATGAACTATATTAAACTAAGTGAAC.............................................................................................................................................................................................................................................2827.001400000005270000000
........................................................................................................................................TAAATAGTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2727.001400000004460000000
.........................................................................TAA-ACAAACGAACTATATTGA----ACTATA........................................................................................................................................................................................................2727.001400300002090000000
.................................................TATATTAAACTAAGTGAACTAAATTAA-A...................................................................................................................................................................................................................................2826.501300000017050000000
...........................................................TAAGTGAACTAAATTAA-ACAAACGAAC..........................................................................................................................................................................................................................2726.501300200013070000000
.....................................................TTAAACTAAGTGAACTAAATTAA-ACAAA...............................................................................................................................................................................................................................2826.001200000006060000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2976.00420000004231140000000
..........................................................................................................AAAAAGACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................2625.001000000024040000000
.................................................TATATTAAACTAAGTGAACTAAATTA......................................................................................................................................................................................................................................2625.001000000007030000000
......................................................TAAACTAAGTGAACTAAATTAA-ACAAACG.............................................................................................................................................................................................................................2925.001000000019000000000
...........................................................................................................AAAAGACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................2524.50900000012051000000
..........................................................................................................................TTCGTTCAGTTTGGTAAATAGTTCAAT-...........................................................................................................................................................2723.50700000001150000000
.................................................TATATTAAACTAAGTGAACTAAATTAA-AC..................................................................................................................................................................................................................................2923.50700000004120000000
.........................................................................................................AAAAAAGACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2823.50700000005020000000
..............................................................................................................................TTCAGTTTGGTAAATAGTTCAAT-TTAGT......................................................................................................................................................2823.50700000002140000000
.........................................................................TAA-ACAAACGAACTATATTGA----ACTATAAA......................................................................................................................................................................................................2923.00600000014010000000
.................................................TATATTAAACTAAGTGAACTAAATTAA-ACA.................................................................................................................................................................................................................................3023.00600000006000000000
............................................................................................................................CGTTCAGTTTGGTAAATAGTTCAAT-...........................................................................................................................................................2523.00600000000060000000
................................................................................AACGAACTATATTGA----ACTATAAAAAA...................................................................................................................................................................................................2623.00600000001140000000
................................TATTGAACTAAATGAACTATATTAAAC......................................................................................................................................................................................................................................................2723.00600000001140000000
.................................................TATATTAAACTAAGTGAACTAAAT........................................................................................................................................................................................................................................2423.00600000002040000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTTTG..........................................................................................................................................................................2462.5015000000000010014000
...................................................................................................................................TTTGGTAAATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................2822.50500000013010000000
........................................TAAATGAACTATATTAAACTAAGTGAA..............................................................................................................................................................................................................................................2722.50500000000050000000
.........................................................................TAA-ACAAACGAACTATATTGA----ACTA..........................................................................................................................................................................................................2522.50500110003000000000
.......................................................................................TATATTGA----ACTATAAAAAAAGACCTAGTT.........................................................................................................................................................................................2922.50500000004010000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTTTGGT........................................................................................................................................................................2662.171300000041410012000
...............................................................................................................................TCAGTTTGGTAAATAGTTCAAT-TTAG.......................................................................................................................................................2622.00400000001210000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAAT-TT.........................................................................................................................................................2822.00400000000310000000
...................................................TATTAAACTAAGTGAACTAAATTAA-ACA.................................................................................................................................................................................................................................2822.00400000003010000000
.......................................................................................................TAAAAAAAGACCTAGTTCGTTCGTTCAG..............................................................................................................................................................................2822.00400000000220000000
................................................................................AACGAACTATATTGA----ACTATAAAAAAA..................................................................................................................................................................................................2722.00400000000040000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTTT...........................................................................................................................................................................2362.0012000000000000012000
.........................................................................TAA-ACAAACGAACTATATTGA----ACTAT.........................................................................................................................................................................................................2622.00400000002110000000
.................................................TATATTAAACTAAGTGAACTAAATTAA-....................................................................................................................................................................................................................................2722.00400000011020000000
...................................TGAACTAAATGAACTATATTAAACT.....................................................................................................................................................................................................................................................2522.00400000000130000000
..................................TTGAACTAAATGAACTATATTAAACT.....................................................................................................................................................................................................................................................2622.00400000011020000000
....................................................................TAAATTAA-ACAAACGAACTATATTGA----AC............................................................................................................................................................................................................2822.00400000001120000000
...................................................................................................................TAGTTCGTTCGTTCAGTTT...........................................................................................................................................................................1961.671000009000001000000
................................................................................................................ACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2161.671000109000000000000
..............................................................................................................................TTCAGTTTGGTAAATAGTTCAAT-TTAG.......................................................................................................................................................2721.50300000000030000000
...................................TGAACTAAATGAACTATATTAAACTAAG..................................................................................................................................................................................................................................................2821.50300000011010000000
......................................................................................................................................GGTAAATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................2521.50300000001200000000
.......................................................................................................................TCGTTCGTTCAGTTTGGTAAATAGTT................................................................................................................................................................2621.50300000000030000000
...............................................................................................................................TCAGTTTGGTAAATAGTTCAAT-TTAGT......................................................................................................................................................2721.50300000000120000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGGTAA......................................................................................................................................................................2421.50300000000120000000
.........................................................................TAA-ACAAACGAACTATATTGA----AC............................................................................................................................................................................................................2321.50300200001000000000
.........................................................................................TATTGA----ACTATAAAAAAAGACCTAGTT.........................................................................................................................................................................................2721.50300000000030000000
.....................................................TTAAACTAAGTGAACTAAATTAA-ACA.................................................................................................................................................................................................................................2621.50300000002010000000
........................................................................................................................................TAAATAGTTCAAT-TTAGTTCGTTA................................................................................................................................................2421.50300000000120000000
................................................................................AACGAACTATATTGA----ACTATAAAAA....................................................................................................................................................................................................2521.50300000002010000000
.......................................................................................................TAAAAAAAGACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................3021.50300000012000000000
.......................................................................................................TAAAAAAAGACCTAGTTCGTTCGT..................................................................................................................................................................................2421.50300000001110000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTG..........................................................................................................................................................................2061.50900009000000000000
.................................................TATATTAAACTAAGTGAACTAAATT.......................................................................................................................................................................................................................................2521.50300000002010000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCA..............................................................................................................................................................2421.50300000001020000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGGTAAATAGT.................................................................................................................................................................2921.50300000003000000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTTTGG.........................................................................................................................................................................2561.33800000002210003000
..............................................................................................................................................GTTCAAT-TTAGTTCGTT.................................................................................................................................................1771.14800000000008000000
.TG-AAC-----------------------TATATTGAACTAAATGAACT...............................................................................................................................................................................................................................................................2521.00200000000020000000
.TG-AAC-----------------------TATATTGAACTAAATGAACTATA............................................................................................................................................................................................................................................................2821.00200000000110000000
..........................................................................................................................TTCGTTCAGTTTGGTAAATAGTTCAA.............................................................................................................................................................2621.00200000000020000000
.................................................TATATTAAACTAAGTGAACTAAA.........................................................................................................................................................................................................................................2321.00200000000110000000
......................................................................................................................TTCGTTCGTTCAGTTTGGTAAATAGT.................................................................................................................................................................2621.00200000000020000000
.TG-AAC-----------------------TATATTGAACTAAATGAACTA..............................................................................................................................................................................................................................................................2621.00200000000020000000
...................................................TATTAAACTAAGTGAACTAAATTAA-AC..................................................................................................................................................................................................................................2721.00200000001010000000
...........................................................TAAGTGAACTAAATTAA-ACAAACGAACT.........................................................................................................................................................................................................................2821.00200000002000000000
............................................TGAACTATATTAAACTAAGTGAACTAAA.........................................................................................................................................................................................................................................2821.00200000000110000000
.................................................TATATTAAACTAAGTGAACTAAATTAT-....................................................................................................................................................................................................................................2721.00200000002000000000
.....................................................TTAAACTAAGTGAACTAA..........................................................................................................................................................................................................................................1821.00200000002000000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTC............................................................................................................................................2171.00700000000000007000
..............................................................................CAAACGAACTATATTGA----ACTATAA.......................................................................................................................................................................................................2421.00200000001010000000
............................................................................................................AAAGACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2521.00200000020000000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGGTAAAA....................................................................................................................................................................2621.00200000002000000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2261.00600000010000005000
....................................................................................................................................TTGGTAAATAGTTCAAT-TTAGTTCGTTA................................................................................................................................................2821.00200000000020000000
......................................................................................................................TTCGTTCGTTCAGTTTGGTAAATAGTT................................................................................................................................................................2721.00200000000020000000
.......................................................................................................TAAAAAAAGACCTAGTTCGT......................................................................................................................................................................................2021.00200000001001000000
.......................................................................................................................TCGTTCGTTCAGTTTGGTAAATAGT.................................................................................................................................................................2521.00200000000020000000
.........................................................................TAA-ACAAACGAACTATATTGA----ACTATAA.......................................................................................................................................................................................................2821.00200000000020000000
...................................................TATTAAACTAAGTGAACTAAATTA......................................................................................................................................................................................................................................2421.00200000002000000000
.......................................................................................................TAAAAAAAGACCTAGTTCGTTCGTTC................................................................................................................................................................................2621.00200000000011000000
..........................................................................................................AAAAAGACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2721.00200000001010000000
....................................................................................................CTATAAAAAAAGACCTAGTTCGTTCGT..................................................................................................................................................................................2721.00200000002000000000
..................................TTGAACTAAATGAACTATATTAAAC......................................................................................................................................................................................................................................................2521.00200000002000000000
.....................................................................................................TATAAAAAAAGACCTAGTTCGTT.....................................................................................................................................................................................2321.00200000002000000000
............................................................................................................................CGTTCAGTTTGGTAAATAGTTCAAT-TT.........................................................................................................................................................2721.00200000000020000000
.........................................................................................................AAAAAAGACCTAGTTCGTTCGTTCAG..............................................................................................................................................................................2621.00200000001010000000
...........................................................................A-ACAAACGAACTATATTGA----ACTATA........................................................................................................................................................................................................2521.00200000001010000000
............................................TGAACTATATTAAACTAAGTGAACTAA..........................................................................................................................................................................................................................................2721.00200000000020000000
.........................................................................................TATTGA----ACTATAAAAAAAGACCTAG...........................................................................................................................................................................................2521.00200000000020000000
...............................................................TGAACTAAATTAA-ACAAACGAACTAT.......................................................................................................................................................................................................................2621.00200000000000020000
..G-AAC-----------------------TATATTGAACTAAATGAACTA..............................................................................................................................................................................................................................................................2521.00200000002000000000
..................................................................................CGAACTATATTGA----ACTATAAAAAAAGA................................................................................................................................................................................................2721.00200000000020000000
.........................................................................................................................GTTCGTTCAGTTTGGTAAATAGTT................................................................................................................................................................2421.00200000001010000000
.........................................................................................................................................AAATAGTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2621.00200000001010000000
............................................................................................................AAAGACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................2421.00200000002000000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTC............................................................................................................................................2470.86600000000000006000
...............................................................................................................GACCTAGTTCGTTCGTT.................................................................................................................................................................................1760.83500000000005000000
..................................................................................................................CTAGTTCGTTCGTTCAGTTTGG.........................................................................................................................................................................2260.83500000000140000000
.............................................................................................................................................AGTTCAAT-TTAGTTCGTTCGT..............................................................................................................................................2170.71500000000000005000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTCACGA-.......................................................................................................................................2870.57400000011020000000
...................................TGAACTAAATGAACTATATTAAACTA....................................................................................................................................................................................................................................................2620.50100000001000000000
........................................................................TTAA-ACAAACGAACTATATTGA----ACTATA........................................................................................................................................................................................................2820.50100000001000000000
............................................................................................................................CGTTCAGTTTGGTAAATAGTTCAA.............................................................................................................................................................2420.50100000001000000000
.................................................TATATTAAACTAAGTGA...............................................................................................................................................................................................................................................1720.50100000001000000000
...................................................TATTAAACTAAGTGAACTAAATTAA-ACAAA...............................................................................................................................................................................................................................3020.50100000001000000000
.......................................................................................TATATTGA----ACTATAAAAAAAGACCTAGT..........................................................................................................................................................................................2820.50100000001000000000
...................................................TATTAAACTAAGTGAACTAAATTAA-A...................................................................................................................................................................................................................................2620.50100000000010000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCATG-C..........................................................................................................................................................2720.50100000000001000000
..................................TTGAACTAAATGAACTATATTAAACTA....................................................................................................................................................................................................................................................2720.50100000000100000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGGTAAATA...................................................................................................................................................................2720.50100000000010000000
.......................................................................................................................TCGTTCGTTCAGTTTGGTAAATAGTTCAA.............................................................................................................................................................2920.50100000000100000000
........................................................................TTAA-ACAAACGAACTATATTGA----AC............................................................................................................................................................................................................2420.50100000000010000000
.TG-AAC-----------------------TATATTGAACTAAATGAACTAT.............................................................................................................................................................................................................................................................2720.50100000000010000000
..........................................................................AA-ACAAACGAACTATATTGA----ACTATAA.......................................................................................................................................................................................................2720.50100000001000000000
.................................................................................................................................AGTTTGGTAAATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................3020.50100000010000000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAAC-A..........................................................................................................................................................2720.50100000000001000000
....................................................................................................................AGTTCGTTCGTTCAGTTTGGTAAATA...................................................................................................................................................................2620.50100000000100000000
..................................................................................................................CTAGTTCGTTCGTTCAGTTTGGTA.......................................................................................................................................................................2420.50100000000010000000
...................................................................CTAAATTAA-ACAAACGAACTATATTGA----A.............................................................................................................................................................................................................2820.50100000000010000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTT................................................................................................................................................................2220.50100000000010000000
GTG-AAC-----------------------TATATTGAACTAAATGAA.................................................................................................................................................................................................................................................................2420.50100000001000000000
.......................................................................................TATATTGA----ACTATAAAAAAAGACCTA............................................................................................................................................................................................2620.50100000000000010000
................................................................................AACGAACTATATTGA----ACTATAAAAAAAG.................................................................................................................................................................................................2820.50100000001000000000
...................................................................................................................................TTTGGTAAATAGTTCAAT-TA.........................................................................................................................................................2020.50100000000001000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAAT-C..........................................................................................................................................................2720.50100000000010000000
............................................TGAACTATATTAAACTAAGTGAACTAAAT........................................................................................................................................................................................................................................2920.50100000001000000000
......................................................TAAACTAAGTGAACTAAATTAA-ACAAAC..............................................................................................................................................................................................................................2820.50100000001000000000
.......................................................................................................................TCGTTCGTTCAGTTTGG.........................................................................................................................................................................1760.50300000000003000000
.......................................CTAAATGAACTATATTAAACT.....................................................................................................................................................................................................................................................2120.50100000010000000000
............................................................................................TGA----ACTATAAAAAAAGACCTAGT..........................................................................................................................................................................................2320.50100000000010000000
........................................................................................................................................TAAATAGTTCAAT-TTAGTTCGTTCG...............................................................................................................................................2520.50100000000010000000
..................................................................................................................................GTTTGGTAAATAGTTCAAT-T..........................................................................................................................................................2020.50100000000001000000
.......................................................................................TATATTGA----ACTATAAAAAAAGA................................................................................................................................................................................................2220.50100000000100000000
.................................................................................................................................AGTTTGGTAAATAGTTCA..............................................................................................................................................................1820.50100001000000000000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGGTAAATT...................................................................................................................................................................2720.50100000000010000000
........................................................................................................................CGTTCGTTCAGTTTGGTAAATAG..................................................................................................................................................................2320.50100000000100000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................2160.50300000000003000000
.....................................................TTAAACTAAGTGAACTAAATTAA-ACAA................................................................................................................................................................................................................................2720.50100000001000000000
................................................................................AACGAACTATATTGA----ACTATAAAAAAAA.................................................................................................................................................................................................2820.50100000000010000000
..G-AAC-----------------------TATATTGAACTAAATGAACTATA............................................................................................................................................................................................................................................................2720.50100000000100000000
.....................................................TTAAACTAAGTGAACTAAA.........................................................................................................................................................................................................................................1920.50100000001000000000
.........................................................................................................................GTTCGTTCAGTTTGGTAAATAGTTC...............................................................................................................................................................2520.50100000000010000000
........................................................................................................................................TAAATAGTTCAAT-TTAGTT.....................................................................................................................................................1920.50100000001000000000
...................................TGAACTAAATGAACTATATTAAACTAAGT.................................................................................................................................................................................................................................................2920.50100000001000000000
........................................................................................................................CGTTCGTTCAGTTTGGTAAATAGTTCAAT-T..........................................................................................................................................................3020.50100000000100000000
.................................................TATATTAAACTAAGTGAACTA...........................................................................................................................................................................................................................................2120.50100000000100000000
...............................................................................................................................TCAGTTTGGTAAATAGTTCAAT-TTAGTT.....................................................................................................................................................2820.50100000000100000000
..................................................................................CGAACTATATTGA----ACTATAAAAAAAGACC..............................................................................................................................................................................................2920.50100000000010000000
......................................................TAAACTAAGTGAACTAAATTAA-ACAA................................................................................................................................................................................................................................2620.50100000000010000000
...................................................................................GAACTATATTGA----ACTATAAAAAAAGAC...............................................................................................................................................................................................2720.50100000000010000000
.......................................................AAACTAAGTGAACTAAATT.......................................................................................................................................................................................................................................1920.50100001000000000000
........................................................................................................AAAAAAAGACCTAGTTCGTTCGTT.................................................................................................................................................................................2420.50100000001000000000
........................................TAAATGAACTATATTAAACTAAGTGA...............................................................................................................................................................................................................................................2620.50100000001000000000
..............................................................................................................................TTCAGTTTGGTAAATAGTTCAAT-T..........................................................................................................................................................2420.50100000001000000000
..............................................................................................................AGACCTAGTTCGTTCGTTCAGTT............................................................................................................................................................................2360.50300000010000011000
...................................................TATTAAACTAAGTGAACT............................................................................................................................................................................................................................................1820.50100000000010000000
...............................................................................................................GACCTAGTTCGTTCGT..................................................................................................................................................................................1660.50300000000003000000
....................................................................................................CTATAAAAAAAGACCTAGTTCGTTCGTTC................................................................................................................................................................................2920.50100000001000000000
...........................................................TAAGTGAACTAAATTAA-ACAAACGAACTA........................................................................................................................................................................................................................2920.50100000001000000000
...........................................................................................................................TCGTTCAGTTTGGTAAAT....................................................................................................................................................................1820.50100000000001000000
............................................TGAACTATATTAAACTAAGTGAACTA...........................................................................................................................................................................................................................................2620.50100000000010000000
.....................................................................................................................................TGGTAAATAGTTCAAT-TTAGTTCGT..................................................................................................................................................2520.50100000000010000000
.................................................................................ACGAACTATATTGA----ACTATAAAAAAAAGA...............................................................................................................................................................................................2920.50100000000010000000
.......................................................AAACTAAGTGAACTAAATTAA-ACAAACG.............................................................................................................................................................................................................................2820.50100000001000000000
GTG-AAC-----------------------TATATTGAACTAAATGAAC................................................................................................................................................................................................................................................................2520.50100000000010000000
............................................................................................TGA----ACTATAAAAAAAGACCTA............................................................................................................................................................................................2120.50100000000010000000
...........................................................................................................................TCGTTCAGTTTGGTAA......................................................................................................................................................................1620.50100000001000000000
....................................................................................................CTATAAAAAAAGACCTAGTTCGTTCGTT.................................................................................................................................................................................2820.50100000010000000000
....................................GAACTAAATGAACTATATTAAACTAAG..................................................................................................................................................................................................................................................2720.50100000000010000000
......................................................................................................ATAAAAAAAGACCTAGTTCGTTCGTT.................................................................................................................................................................................2620.50100000001000000000
.............................................................................................................AAGACCTAGTTCGTTCGTTCAGTTTGGT........................................................................................................................................................................2820.50100000001000000000
.....................................................TTAAACTAAGTGAACTAAATTAA-AC..................................................................................................................................................................................................................................2520.50100000000100000000
.............................................................................................GA----ACTATAAAAAAAGACCTAGTTCGT......................................................................................................................................................................................2620.50100000000001000000
.........................................................................................TATTGA----ACTATAAAAAAAGA................................................................................................................................................................................................2020.50100000000010000000
..............................TATATTGAACTAAATGAACTATATT..........................................................................................................................................................................................................................................................2520.50100000000010000000
........................................................................TTAA-ACAAACGAACTATATTGA----ACTATAA.......................................................................................................................................................................................................2920.50100000000010000000
.....................................................................................................TATAAAAAAAGACCTAGTTCGTTA....................................................................................................................................................................................2420.50100000000010000000
.......................................................................................................................TCGTTCGTTCAGTTTGGTAAATAG..................................................................................................................................................................2420.50100000001000000000
..................................................................................CGAACTATATTGA----ACTATAAAAAA...................................................................................................................................................................................................2420.50100000000010000000
...........................................................................................................................TCGTTCAGTTTGGTAAATAGTTCAAT-TTAGT......................................................................................................................................................3120.50100000000010000000
................................................................................................................ACCTAGTTCGTTCGTTCAGTTTGGTAAA.....................................................................................................................................................................2820.50100000000010000000
..............................................................................CAAACGAACTATATTGA----ACTATAAAAAA...................................................................................................................................................................................................2820.50100000000100000000
...................................................................................GAACTATATTGA----ACTATAAAAAAAGACC..............................................................................................................................................................................................2820.50100000000010000000
...................................TGAACTAAATGAACTATATTAAA.......................................................................................................................................................................................................................................................2320.50100000000010000000
.....................................................................................................................................TGGTAAATAGTTCAAT-TTAGTTCGTTCGT..............................................................................................................................................2920.50100000001000000000
...........................................................................................TTGA----ACTATAAAAAAAGACCTAGTT.........................................................................................................................................................................................2520.50100000000010000000
..............................................................................................................AGACCTAGTTCGTTCGTTCAGTTT...........................................................................................................................................................................2460.50300000000000003000
....................................................................TAAATTAA-ACAAACGAACTATATTGA----ACT...........................................................................................................................................................................................................2920.50100000001000000000
....................................................................................................................................TTGGTAAATAGTTCAAT-TTAGTTCGTTC................................................................................................................................................2820.50100000000010000000
.TG-AAC-----------------------TATATTGAACTAAATGAACTATAT...........................................................................................................................................................................................................................................................2920.50100000010000000000
.................................................................................................................CCTAGTTCGTTCGTTCAGTTTGGTAAA.....................................................................................................................................................................2720.50100000001000000000
.................................ATTGAACTAAATGAACTATATTAAACTA....................................................................................................................................................................................................................................................2820.50100000001000000000
...................................................................................................ACTATAAAAAAAGACCTAGTTCGTTCGT..................................................................................................................................................................................2820.50100000000010000000
..............................................................................CAAACGAACTATATTGA----ACTATAAAAAAA..................................................................................................................................................................................................2920.50100000000010000000
..........................................................................................................................................AATAGTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2570.43300000010020000000
.............................................................................................................................................AGTTCAAT-TTAGTTCGTT.................................................................................................................................................1870.43300000000003000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTCA...........................................................................................................................................2570.43300000001000002000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2770.43300000010110000000
...............................................................................................................GACCTAGTTCGTTCGTTC................................................................................................................................................................................1860.33200000000002000000
...................................................................................................................TAGTTCGTTCGTTCAGT.............................................................................................................................................................................1760.33200000000002000000
.................................................................................................................CCTAGTTCGTTCGTTCAGTTTG..........................................................................................................................................................................2260.33200000000020000000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTTCACGA-.......................................................................................................................................2670.29200000001010000000
....................................................................................................................................................T-TTAGTTCGTTCGTTCACGA-AA.....................................................................................................................................2270.29200000000200000000
......................................................................................................................................................TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2070.29200000000011000000
................................................................................................................................................TCAAT-TTAGTTCGTTCGTTCA...........................................................................................................................................2170.29200000010010000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTCAC..........................................................................................................................................2670.29200000000010001000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTCACG.........................................................................................................................................2470.29200000000000002000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2370.29200000000010001000
.................................................................................................................................................CAAT-TTAGTTCGTTCGTTCAC..........................................................................................................................................2170.29200000001000001000
................................................................................................................................................TCAAT-TTAGTTCGTTCGTTCACGA-.......................................................................................................................................2470.29200000010010000000
................................................................................................................ACCTAGTTCGTTCGTTCAGTTTG..........................................................................................................................................................................2360.17100000000000001000
...................................................................................................................TAGTTCGTTCGTTCAGTTTGG.........................................................................................................................................................................2160.17100000010000000000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTTTAA.........................................................................................................................................................................2560.17100000000000001000
..............................................................................................................AGACCTAGTTCGTTCGTTCAGTTTGG.........................................................................................................................................................................2660.17100000000010000000
...............................................................................................................GACCTAGTTCGTTCGTTCA...............................................................................................................................................................................1960.17100000000000001000
....................................................................................................................AGTTCGTTCGTTCAGT.............................................................................................................................................................................1660.17100000000001000000
..............................................................................................................AGACCTAGTTCGTTCGTTCAGT.............................................................................................................................................................................2260.17100000000001000000
...................................................................................................................TAGTTCGTTCGTTCAGTT............................................................................................................................................................................1860.17100000000001000000
..............................................................................................................AGACCTAGTTCGTTCGTT.................................................................................................................................................................................1860.17100000000001000000
..............................................................................................................AGACCTAGTTCGTTCGTTCAGTTTGGT........................................................................................................................................................................2760.17100000000000010000
..................................................................................................................CTAGTTCGTTCGTTCAGTTT...........................................................................................................................................................................2060.17100000000000001000
...............................................................................................................GACCTAGTTCGTTCGTTCAGTTTGGG........................................................................................................................................................................2660.17100000000100000000
..........................................................................................................................................AATAGTTCAAT-TTAGTTCGTT.................................................................................................................................................2170.14100000000001000000
..................................................................................................................................................AAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2370.14100000001000000000
................................................................................................................................................TCAAT-TTAGTTCGTTCGTTC............................................................................................................................................2070.14100000000000001000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2070.14100000000000010000
.............................................................................................................................................AGTTCAAT-TTAGTTCGTTCGTTCACGA-A......................................................................................................................................2870.14100000000100000000
..............................................................................................................................................GTTCAAT-TTAGTTCGTTCGTT.............................................................................................................................................2170.14100000000000001000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCG...............................................................................................................................................2170.14100000000000001000
..................................................................................................................................................AAT-TTAGTTCGTTCGTT.............................................................................................................................................1770.14100000000001000000
.......................................................................................................................................................TAGTTCGTTCGTTCACGA-AA.....................................................................................................................................2070.14100000000001000000
.......................................................................................................................................................TAGTTCGTTCGTTCACGA-ACGACA.................................................................................................................................2470.14100000000001000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTCACG.........................................................................................................................................2770.14100000000100000000
................................................................................................................................................TCAAT-TTAGTTCGTTCGTTCACGA-AC.....................................................................................................................................2670.14100000000010000000
.......................................................................................................................................................TAGTTCGTTCGTTCACGA-ACGAC..................................................................................................................................2370.14100000000001000000
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGTTCACGA-AA.....................................................................................................................................3070.14100000001000000000
...............................................................................................................................................TTCAAT-TTAGTTCGTTCGTTCACGA-.......................................................................................................................................2570.14100000000100000000
...........................................................................................................................................ATAGTTCAAT-TTAGTT.....................................................................................................................................................16100.10100000000001000000
droSec2
GTG-AAC-----------------------TATATTGAACTAAG-------------------TGAACTAAATTGA-ACTATCGAACTATATTGA----ACTATAAAGGCAGACCTAGTTCGTTCGTTCAGTTTGGTGAATAGTTCAAT-TTAGTTCGTTCGTTCACGA-ACGACACAACACTACTTCATATGCACTTCTT--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................TTGGTGAATAGTTCAAT-TTAG.......................................................................................................................................................21150.93140248
...................................................................................................................................TTTGGTGAATAGTTCAAT-TTAG.......................................................................................................................................................22150.2740220
...................................................................................................................................TTTGGTGAATAGTTCAAT-TTAGT......................................................................................................................................................23150.1320200
.........................................................................................TATTGA----ACTATAAAGGCAGACCTAGT..........................................................................................................................................................................................26150.0710001
.........................................................................................TATTGA----ACTATAAAGGCAGACC..............................................................................................................................................................................................22150.0710100
................................................................................................................................................................CGTTCACGA-ACGACACAACA............................................................................................................................20160.0611000
...................................................................................................................................................................TCACGA-ACGACACAACACT..........................................................................................................................19160.0610001
............................................................................................................................................TAGTTCAAT-TTAGTTCGTTCGT..............................................................................................................................................22160.0610010
..................................................................................................................................GTTTGGTGAATAGTTCAAT-TTT........................................................................................................................................................22160.0610100
................................................................................................................................................................CGTTCACGA-ACGACACAACACTA.........................................................................................................................23160.0611000
..................................................................................................................................................................TTCACGA-ACGACACAACACT..........................................................................................................................20160.0610001
....................................................................................AACTATATTGA----ACTATAAAG.....................................................................................................................................................................................................20170.0611000
...............................................................................TATCGAACTATATTGA----ACTATA........................................................................................................................................................................................................22170.0610010
...............................................................TGAACTAAATTGA-ACTATCGA............................................................................................................................................................................................................................21170.0611000
...............................................................................TATCGAACTATATTGA----ACTAT.........................................................................................................................................................................................................21170.0611000
droYak3
GCG-GAT-----------------------AAAAGTGTGC-TTGTGCCCAGAAAAGAAG-TAGCAAAAAAATAAAAAAAACGGGAGAAAAAAAGG----AAAAGAATGGGGAAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTT-TTC-----------------------CGTGT------------------------------------------------------------------------------------------TCCTAATCATATG-------------------------------------------------------TATCTATTTTATCTGATC---------------------TGCAGA------------------TCTGCAGTCTTTTGCGTGGAGGAATCGCTGAGCGGGGCGGAGTACGCGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................AGTCTTTTGCGTGGAGGAATCGCT....................2411.0011000000
...............................................................................................................................................................................................................................................................................GTGGAGGAATCGCTGAGCGGGGCG..........2411.0010100000
...............................................................................................................................................................................................................................................................................GTGGAGGAATCGCTGAGCGGGG............2211.0011000000
............................................................................................................................................................................................................................................................................TGCGTGGAGGAATCGCTGAGC................2111.0011000000

Generated: 05/18/2015 at 12:45 AM