ID:

dwi_1096

 Coordinate:

scf2_1100000004515:3464333-3464413 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.8 -10.2 -10.0

Flybase annnotation

CDS [Dwil\GK19776-cds]; CDS [Dwil\GK19776-cds]; exon [dwil_GLEANR_2395:10]; exon [dwil_GLEANR_2395:9]; intron [Dwil\GK19776-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------##################################################
GGCGGCAGCATCCGCATCGAGCGCCAACACGACCATCACAGCAAGCAGCAGTAGCTCCTCCAGTTCGGGCAGTGGCTTCTATTTGAGTGATGTTCTAGTCGACCAGCGTCGACAACAATTGGCGTCAGCAGTTCAATCGCAGAGCAGTAGCAGTAGCAACATCTCGATTCCACCACCTGCA
********************************************************..((.......(((..(((.......((((.((......)).)))))))..)))))********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V117
male body		 M045
female body
 V119
head
 M020
head
........................................................................................GATGTTCTAGTCGACCAGCGTCGA..................................................................... 24 0 1 6.00 6 1 5 0 0 0
...........................................................................................GTTCTAGTCGACCAGCGTCGA..................................................................... 21 0 1 3.00 3 1 2 0 0 0
.....................................ACAGCAAGCAGCAGTAGCT............................................................................................................................. 19 0 1 3.00 3 3 0 0 0 0
.....................................................................................................................ATTGGCGTCAGCAGTTCAAT............................................ 20 0 1 2.00 2 2 0 0 0 0
....................................CACAGCAAGCAGCAGTAGCTC............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................CAACAATTGGCGTCAGCAGTTC............................................... 22 0 1 1.00 1 1 0 0 0 0
.................................................................................................................AACAATTGGCGTCAGCAGT................................................. 19 0 1 1.00 1 0 0 1 0 0
...................................................................................................................CAATTGGCGTCAGCAGTTCAATCGCAGA...................................... 28 0 1 1.00 1 0 1 0 0 0
......................................................................................................................TTGGCGTCAACAGTTCAAGCG.......................................... 21 2 1 1.00 1 0 0 0 1 0
.........................................................................................ATGTTCTAGTCGACCAGCGTC....................................................................... 21 0 1 1.00 1 0 1 0 0 0
........................................................CCTCCAGTTCGGGCAGTGGCTT....................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
.........................................................................................ATGTTCTAGTCGACCAGCGTCGA..................................................................... 23 0 1 1.00 1 0 1 0 0 0
.................................................AGTAGCTCCTCCAGTTCGGGCAGTGGC......................................................................................................... 27 0 1 1.00 1 0 0 1 0 0
.................................................AGTAGCTCCTCCAGTTCGGGCA.............................................................................................................. 22 0 1 1.00 1 0 0 0 0 1
...........................................................................................................................GTCAGCAGTTCAATCGCAGAG..................................... 21 0 1 1.00 1 0 0 1 0 0
........................................................................................GATGTTCTAGTCGACCAGCGT........................................................................ 21 0 1 1.00 1 0 1 0 0 0
....................................................................................GAGTGATGTTCTAGTCGACCAGCGTC....................................................................... 26 0 1 1.00 1 1 0 0 0 0
.....................................ACAGCAAGCAGCAGTGGCT............................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0
...GGCAGCATCCGCATCGAGCGC............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
................................................................................ATTTGAGTGATGTTCTAGT.................................................................................. 19 0 1 1.00 1 0 1 0 0 0
..........................................................................................................CGTCGACAACAATTGGCG......................................................... 18 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................GCAGTTCAATCGCAGAGCA................................... 19 0 1 1.00 1 1 0 0 0 0
.........ATCCGCATCGAGCACCAACACGACCATC................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
...................................................................................................CGACCAGCGTCGACAACAATTGGC.......................................................... 24 0 1 1.00 1 0 1 0 0 0
....................................................................................................................AATTGGCGTCAGCAGTTCAATCGCAGA...................................... 27 0 1 1.00 1 1 0 0 0 0
..............................................................................CTATTTGAGTGATGTTCTAGT.................................................................................. 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................CAACAATTGGCGTCAGCAGTTCAAT............................................ 25 0 1 1.00 1 0 1 0 0 0
............................................................................TTCTATTTGAGTGATGTTCTA.................................................................................... 21 0 1 1.00 1 0 0 1 0 0
..............................GACCATCACAGCAAGCAGC.................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...........CCGCATCGAGCGCCAACACGACC................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................AGTAGCAACATCTCGATTCCACC....... 23 0 1 1.00 1 0 0 1 0 0
...............................................................TTCGGGCAGTGGCTTCTATTTGAG.............................................................................................. 24 0 1 1.00 1 0 0 1 0 0
.................CGAGCGCCAACACGACCAT................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................CGCCGAGCAGTAGCAGTAGC........................ 20 1 1 1.00 1 0 0 0 1 0
............................................................CAGTTCGGGCAGTGGCTTCT..................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
................................................................................................................CAACAATTGGCGTCAGCAG.................................................. 19 0 1 1.00 1 1 0 0 0 0
.........ATCCGCATCGAGCGCCAACACGACCATC................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0
................................................................................................................CAACAATTGGCGTCAGCAGTTCAATC........................................... 26 0 1 1.00 1 0 1 0 0 0
....GCAGCATCCGCATCGAGCGCC............................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................TGTTCTAGTCGACCAGCGTCGA..................................................................... 22 0 1 1.00 1 0 1 0 0 0
........................................................CCTCCAGTTCGGGCAGTGGC......................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................GTTGGCGTCAACAGTTCAAGC........................................... 21 3 5 0.20 1 1 0 0 0 0
............................................................................................................................................CGAGCAGTAGCAGTAGCA....................... 18 1 15 0.07 1 0 0 1 0 0
.....................................................................................................................GTTGGCGTCAACAGTTCAAG............................................ 20 3 19 0.05 1 0 0 0 1 0
......................................................................................................................TTGGCGTCAACAGTTCCA............................................. 18 2 20 0.05 1 1 0 0 0 0
..........................................................................................................................CTTCAGCAGTTAAATCGCT........................................ 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CCGCCGTCGTAGGCGTAGCTCGCGGTTGTGCTGGTAGTGTCGTTCGTCGTCATCGAGGAGGTCAAGCCCGTCACCGAAGATAAACTCACTACAAGATCAGCTGGTCGCAGCTGTTGTTAACCGCAGTCGTCAAGTTAGCGTCTCGTCATCGTCATCGTTGTAGAGCTAAGGTGGTGGACGT
*********************************************************************..((.......(((..(((.......((((.((......)).)))))))..)))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V119
head
......................................................GAGGAGGTCAAGCCCGTCACC.......................................................................................................... 21 0 1 1.00 1 1 0 0
..........................................................AGGTCAAGCAGGTCACAGAAGA..................................................................................................... 22 3 4 0.25 1 1 0 0
......................CGGTTGTGCCGGCAGTGTGG........................................................................................................................................... 20 3 4 0.25 1 0 1 0
...........................................................GGTCAAGCCCGCCACACAA....................................................................................................... 19 3 11 0.09 1 0 1 0
CCGCTGTCGTAGACGTGGCT................................................................................................................................................................. 20 3 14 0.07 1 1 0 0
..................................................................................................................................................................GAGCTTAGGTGCTGGACT. 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004515:3464283-3464463 - dwi_1096 GGC---------GG-----------------------CAGCATCC---------------------------GC--------ATCGAGCGCCAA-------CACGACCATCACAGCA------AGCAGCAG------------------------------------------------------------------------------------TAGCTCCTCC------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCAGTGGCTTCTATTTGAGTGATGTTCTAGTCGACCAGCGTCGACAACAATTGGCGTCAGCAGTTCAATCGCAGAGCAGTAGCAGTAGCAACATCTCGATTCCACCACCTGCA
droVir3 scaffold_12823:1247787-1247948 - AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAGCAA--------------------------------------------------------CAGTCG---------TCGCAGCAGCAGCAG--------------------GCGG---------------GGCCTTTGCTGCCG-GCCAGCAATGAATTCAGTGCCAATTTCGTAAATGCCAACAACAACAACAACAGCCA--TGAGGA---------------------------------------------------------------------------GAGCAAC---------------------------------------------------------AACAACCAC---AACAACAACAA---------------------------------------------------------------------C-----------------------------AGCAACA
droMoj3 scaffold_6473:11064194-11064380 - AGC---------AG-----------------------CAGCACCA---------------------------TC--------ATCAACAGCAGC-------AAC----------------------------------AGCAACAGCAACAGCCG---------CAACAGCAGCTCCAG--------------------TTGCAG---------------CAACTGCAGCAG--------------------------------------------------------------------TTGCAGCATATGCAGCAATTGCAGCAACCACAGCTCCAACTGCAGCTGCCCCAGCAGCAACAGCAGCTGCAACAGCTTC---------------------------------------------------------AGCAACTTC---AGCAGCAACAA---------------------------------------------------------------------C-----------------------------AGCTGCA
droGri2 scaffold_3013:3812-3989 - AGC---------AG-----------------------CAGCAGCA---------------------------GC--------ATCAGCAGCGGC-------AGC----------------------------------AGCAGCAGCAGCGGCAG---------CAGCAGCAGCAGCAG--------------------CGGCAG---------------CAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCATCAGCAGCAGCAAAAACGGCAGCAC--CAACAG---------------------------------------------------------------------------CAGCAGCAGCAGCAGCGTCAAC----------------AT-----CAT------------------------------------------------------------------------------------------------------------C-----------------------------AGCAGCA
dp5 XL_group1e:4589524-4589682 + GAG---------CT-----------------------TAGCTCTACCACCGAGAGCCAGGGCCA----------------------G-----CA-------CACGACCAGCAACGCG------ACGAGCAA------------------------------------------------------------------------------------CAAC----------------------------------------------------------------------ACCCAGAACAAGGGCGACAGTTGCAACAGTTTCGACTACCAAAAGG-CA--------------------------------------------------------GGAGGATCTGCCCAGGGGGGGCAGCA-----------------------------------------------------------------------------------------------------------------------GCAGCCTGTTGCTGCC----ACCACC
droPer2 scaffold_82:107356-107502 - GAC---------GG-----------------------CAGCAGCT---------------------------CCTCAGCAGCAACAACA--------------------------------------------------GCAGCAGCAATC----------------------------------------------------------------------ACAT------------------------------------------------------------------TACCACCAGCAGCAGCAGC------------------------------------------------------------------------------------------------------------------------------------A---GCAACAGCAGCAGCCA---------CAACCTCCCACACAGCCAGCGGCAACCACCAAGACCTACAGCAGTTATGCGGCCAAGC-----------------------------GGCAGCA
droAna3 scaffold_13117:4504440-4504570 - GGC---------GG-----------------------CGGCAGCA---------------------------GC--------AGCGGCCGCCAACGACCTATCCGACCTGCAGGGCC-------------------------------------T---------GGACAT---------------------------------------------GAGCTCCCGC------------T--------------CG-----AAT---------------------------GCGG---------CCAGCAGTAACTATCATCACAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAG--------CTGCCGAGCAG----------------TCGGTATC----ATCATC
droBip1 scf7180000396569:751743-751817 + AGC---------AG-----------------------CAGCAACA---------------------------AC--------AGCAGCAGCAGC-------AAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATCATCAGCAGCAGCAGC------------------------------------------------------------------------------------------------------------------------------AACACGCTCAGCAGCAGCAGCA---------------------------------------------------------------------------------------------------------GC
droKik1 scf7180000302639:539475-539549 - GGC---------GG-----------------------CGGCCTCG---------------------------GC--------AGCGATGGCCAG-------CAAG---------------------------------------------------------------------------------------------------------------GACTCCAGC------------T--------------CC------------------------------------------------------------------------------------------------------------------------------------------AAGGAGGATCAGCCAAGGGCCGCCAGTGCG---------------------------------------------------------------------------------------------------------------------------------------------GG
droFic1 scf7180000454038:891606-891716 + GCC---------ACGTCGACCAACTCGACAACTGGAACACCAACC------------------G-------------------------------------------------------------------------------------------ATGGAGCTGCGGCAGTGGCGGCGGCGGCGG------------AACCAC--AGCCACAGCAGAACTCCACT------------T--------------CC------------------------------------------------------------------------------------------------------------------------------------------AA------------------------TTCG------------------------------------G---------------------------------------------------------------------C-----------------------------GGGGGCG
droEle1 scf7180000491006:1073803-1073967 - GCC---------AC-----------------------CTCCACCA---ACAAC---T-------CGGCAGCAGC--------AGCAGCA-----------------------------------------------------GCTC---CAGCCGATGGAGCA---------------------GACCAGCAGCCACAGTCAC--AGTCTCAGCAAAACTCCTCC-----TT-GTCCTCTTCGGCACCAGCACCGCCATCGGGATCGCCATCGGCATCGTCGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGCCGCAGG---------------------------------------------------------------------T-----------------------------AGCAGTG
droRho1 scf7180000779985:1536852-1536965 - AGG-----AGCCACGTCAACCAACTCGACAACAGGGACTCCAGCC------------------G-------------------------------------------------------------------------------------------ATGGAGCG---------------------G------------AGTCAC--AGCCACAGCAGAACTCCTCC------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGTCGGCGCCGGTGGCAATAC---------------------------------------------------------------------------------------------------------------TCCATCACCAGCG
droBia1 scf7180000298389:742536-742585 + GGC---------GG-----------------------CGGCGGCG---------------------------GC--------GGCGAGAACAAA-------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAAAAA---------------------------------------------------------------------A-----------------------------AGGCGCA
droTak1 scf7180000414450:80413-80601 + CGC---------CG-----------------------GAGCCTCG---------------------------TC--------GGGATTCGCGGG---CCTGGCCGACCTGCACAGCAGCCACGAGCAACAGTTGCAGCAGCAGTACGTGCGATCG---------CAGCCCAAGTACC--------------------------------------------------------------AGTGGCTCGACTCTCCAGCGGATTATGCCCAACAGCAGCAGCAAGTGCAA--GTGCAA---------------------------------------------------------------------------CAGCAGC---------------------------------------------------------AGGTGCA---ACAGCAGCAGCAG---------------------------------------------------------------------C-----------------------------AACAACT
droEug1 scf7180000409110:885444-885513 + AGC---------AA-----------------------CAAAA----------------------CAGCA---GC--------ATCAGTAGCAGC-------AAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTACATCAACAGCAACAGTAGCAACCGTAG------------------------------------------------------------------------------------------------CTGCT----------------------------------------------------------------------------------------------------------------------------------------------C
dm3 chrX:8908309-8908371 + AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGCAGCAGCAGCGATGGCAGCAACTCC-------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------C-----------------------------CGCATCG
droSim2 x:14796594-14796649 + AGG---------GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCAC--AGCCACAGCATAACTCCCCT------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG----------------------------------------------------------------------------------------------------------------------------------------------G
droSec2 scaffold_37:202706-202761 + AGG---------GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCAC--AGCCACAGCATAACTCCTCT------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG----------------------------------------------------------------------------------------------------------------------------------------------G
droYak3 X:9824327-9824419 + AGCGAAAGCGCAACGTCCACCAGCACGACAACAGGGACATCAGCT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------G------------AATCAC--AGCCACAGCAGAACACCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GCGGCA
droEre2 scaffold_4690:11418649-11418738 - GAA---GGCGCCACGTCCACCAGCACGACAACAGCGACAACAGCT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------G------------AATCAC--AGCCACAGCAGAACTCCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GCGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GGC---------GG-----------------------CAGCATCC---------------------------GC--------ATCGAGCGCCAA-------CACGACCATCACAGCA------AGCAGCAG------------------------------------------------------------------------------------TAGCTCCTCC------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCAGTGGCTTCTATTTGAGTGATGTTCTAGTCGACCAGCGTCGACAACAATTGGCGTCAGCAGTTCAATCGCAGAGCAGTAGCAGTAGCAACATCTCGATTCCACCACCTGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCTAGTCGACCAGCGTCGA.....................................................................2416.00600510
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTAGTCGACCAGCGTCGA.....................................................................2113.00300210
...............................................................................................................ACAGCA------AGCAGCAG------------------------------------------------------------------------------------TAGCT.........................................................................................................................................................................................................................................................................................................................................................1913.00300030
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCGTCAGCAGTTCAAT............................................2012.00200020
..............................................................................................................CACAGCA------AGCAGCAG------------------------------------------------------------------------------------TAGCTC........................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAATTGGCGTCAGCAGTTC...............................................2211.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTGGCGTCAGCAGT.................................................1911.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGGCGTCAGCAGTTCAATCGCAGA......................................2811.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCTAGTCGACCAGCGTC.......................................................................2111.00100100
............................................................................................................................................................................................................................CCTCC------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCAGTGGCTT.......................................................................................................2211.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCTAGTCGACCAGCGTCGA.....................................................................2311.00100100
.................................................................................................................................AG------------------------------------------------------------------------------------TAGCTCCTCC------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCAGTGGC.........................................................................................................2711.00101000
.................................................................................................................................AG------------------------------------------------------------------------------------TAGCTCCTCC------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCA..............................................................................................................2211.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCAGTTCAATCGCAGAG.....................................2111.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCTAGTCGACCAGCGT........................................................................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATGTTCTAGTCGACCAGCGTC.......................................................................2611.00100010
............GG-----------------------CAGCATCC---------------------------GC--------ATCGAGCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGTGATGTTCTAGT..................................................................................1911.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGACAACAATTGGCG.........................................................1811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTTCAATCGCAGAGCA...................................1911.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCAGCGTCGACAACAATTGGC..........................................................2411.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGCGTCAGCAGTTCAATCGCAGA......................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTGAGTGATGTTCTAGT..................................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAATTGGCGTCAGCAGTTCAAT............................................2511.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTATTTGAGTGATGTTCTA....................................................................................2111.00101000
........................................................................................................GACCATCACAGCA------AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................CC---------------------------GC--------ATCGAGCGCCAA-------CACGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAGCAACATCTCGATTCCACC.......2311.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG-----------------------------GGCAGTGGCTTCTATTTGAG..............................................................................................2411.00101000
....................................................................................CGAGCGCCAA-------CACGACCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................C------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCAGTGGCTTCT.....................................................................................................2011.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAATTGGCGTCAGCAG..................................................1911.00100010
.........................................ATCC---------------------------GC--------ATCGAGCGCCAA-------CACGACCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAATTGGCGTCAGCAGTTCAATC...........................................2611.00100100
.............G-----------------------CAGCATCC---------------------------GC--------ATCGAGCGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTAGTCGACCAGCGTCGA.....................................................................2211.00100100
............................................................................................................................................................................................................................CCTCC------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCG-----------------------------GGCAGTGGC.........................................................................................................2011.00100100
droVir3
AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAGCAA--------------------------------------------------------CAGTCG---------TCGCAGCAGCAGCAG--------------------GCGG---------------GGCCTTTGCTGCCG-GCCAGCAATGAATTCAGTGCCAATTTCGTAAATGCCAACAACAACAACAACAGCCA--TGAGGA---------------------------------------------------------------------------GAGCAAC---------------------------------------------------------AACAACCAC---AACAACAACAA---------------------------------------------------------------------C-----------------------------AGCAACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................TGCCAATTTCGTAAATGCCAACA....................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................GCAGCAA--------------------------------------------------------CAGTCG---------TCGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................AGCAG--------------------GCGG---------------GGCCTTTGCTGCCG-GC..........................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................ATTCAGTGCCAATTTCGTA..............................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ACAACAACAACAGCCA--TGAGGA---------------------------------------------------------------------------GA...............................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
...........................................................................................AA--------------------------------------------------------CAGTCG---------TCGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CAACAACAACAGCCA--TGAGGA---------------------------------------------------------------------------GA...............................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAGCAA--------------------------------------------------------CAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2870.141000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAC---AACAACAACAA---------------------------------------------------------------------C-----------------------------AGC....22150.071000100000000000000000000000000000000000000000000000000000000000
..........................................GCA---------------------------GC--------AGCAGCAGCAA--------------------------------------------------------CAGT............................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..C---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAGCAA--------------------------------------------------------CA..............................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAGCAA--------------------------------------------------------CA..............................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
AGC---------AG-----------------------CAGCACCA---------------------------TC--------ATCAACAGCAGC-------AAC----------------------------------AGCAACAGCAACAGCCG---------CAACAGCAGCTCCAG--------------------TTGCAG---------------CAACTGCAGCAG--------------------------------------------------------------------TTGCAGCATATGCAGCAATTGCAGCAACCACAGCTCCAACTGCAGCTGCCCCAGCAGCAACAGCAGCTGCAACAGCTTC---------------------------------------------------------AGCAACTTC---AGCAGCAACAA---------------------------------------------------------------------C-----------------------------AGCTGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................C----------------------------------AGCAACAGCAACAGCCG---------CA...............................................................................................................................................................................................................................................................................................................................................................................................................20100.101000010
..................................................................................ATCAACAGCAGC-------AAC----------------------------------AGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droGri2
AGC---------AG-----------------------CAGCAGCA---------------------------GC--------ATCAGCAGCGGC-------AGC----------------------------------AGCAGCAGCAGCGGCAG---------CAGCAGCAGCAGCAG--------------------CGGCAG---------------CAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCATCAGCAGCAGCAAAAACGGCAGCAC--CAACAG---------------------------------------------------------------------------CAGCAGCAGCAGCAGCGTCAAC----------------AT-----CAT------------------------------------------------------------------------------------------------------------C-----------------------------AGCAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................GCAGCAC--CAACAG---------------------------------------------------------------------------CAGCAGCA.........................................................................................................................................................................................21200.05110
.............................................................................................C-------AGC----------------------------------AGCAGCAGCAGCGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101
dp5
GAG---------CT-----------------------TAGCTCTACCACCGAGAGCCAGGGCCA----------------------G-----CA-------CACGACCAGCAACGCG------ACGAGCAA------------------------------------------------------------------------------------CAAC----------------------------------------------------------------------ACCCAGAACAAGGGCGACAGTTGCAACAGTTTCGACTACCAAAAGG-CA--------------------------------------------------------GGAGGATCTGCCCAGGGGGGGCAGCA-----------------------------------------------------------------------------------------------------------------------GCAGCCTGTTGCTGCC----ACCACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................CGACTACCAAAAGG-CA--------------------------------------------------------GGAGGATC...................................................................................................................................................................2411.0010100000000
.AG---------CT-----------------------TAGCTCTACCACCGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
droPer2
GAC---------GG-----------------------CAGCAGCT---------------------------CCTCAGCAGCAACAACA--------------------------------------------------GCAGCAGCAATC----------------------------------------------------------------------ACAT------------------------------------------------------------------TACCACCAGCAGCAGCAGC------------------------------------------------------------------------------------------------------------------------------------A---GCAACAGCAGCAGCCA---------CAACCTCCCACACAGCCAGCGGCAACCACCAAGACCTACAGCAGTTATGCGGCCAAGC-----------------------------GGCAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................AATC----------------------------------------------------------------------ACAT------------------------------------------------------------------TACCACCAGCA.......................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................GC------------------------------------------------------------------------------------------------------------------------------------A---GCAACAGCAGCAGCCA---------C.............................................................................................20100.101010000
droAna3
GGC---------GG-----------------------CGGCAGCA---------------------------GC--------AGCGGCCGCCAACGACCTATCCGACCTGCAGGGCC-------------------------------------T---------GGACAT---------------------------------------------GAGCTCCCGC------------T--------------CG-----AAT---------------------------GCGG---------CCAGCAGTAACTATCATCACAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAG--------CTGCCGAGCAG----------------TCGGTATC----ATCATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................CAACGACCTATCCGACCTGCAGGGCC-------------------------------------T---------.................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droBip1
AGC---------AG-----------------------CAGCAACA---------------------------AC--------AGCAGCAGCAGC-------AAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATCATCAGCAGCAGCAGC------------------------------------------------------------------------------------------------------------------------------AACACGCTCAGCAGCAGCAGCA---------------------------------------------------------------------------------------------------------GCSizeHit CountTotal NormTotal
No Reads
droKik1
GGC---------GG-----------------------CGGCCTCG---------------------------GC--------AGCGATGGCCAG-------CAAG---------------------------------------------------------------------------------------------------------------GACTCCAGC------------T--------------CC------------------------------------------------------------------------------------------------------------------------------------------AAGGAGGATCAGCCAAGGGCCGCCAGTGCG---------------------------------------------------------------------------------------------------------------------------------------------GGSizeHit CountTotal NormTotal
No Reads
droFic1
GCC---------ACGTCGACCAACTCGACAACTGGAACACCAACC------------------G-------------------------------------------------------------------------------------------ATGGAGCTGCGGCAGTGGCGGCGGCGGCGG------------AACCAC--AGCCACAGCAGAACTCCACT------------T--------------CC------------------------------------------------------------------------------------------------------------------------------------------AA------------------------TTCG------------------------------------G---------------------------------------------------------------------C-----------------------------GGGGGCGSizeHit CountTotal NormTotal
No Reads
droEle1
GCC---------AC-----------------------CTCCACCA---ACAAC---T-------CGGCAGCAGC--------AGCAGCA-----------------------------------------------------GCTC---CAGCCGATGGAGCA---------------------GACCAGCAGCCACAGTCAC--AGTCTCAGCAAAACTCCTCC-----TT-GTCCTCTTCGGCACCAGCACCGCCATCGGGATCGCCATCGGCATCGTCGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGCCGCAGG---------------------------------------------------------------------T-----------------------------AGCAGTGSizeHit CountTotal NormTotal
No Reads
droRho1
AGG-----AGCCACGTCAACCAACTCGACAACAGGGACTCCAGCC------------------G-------------------------------------------------------------------------------------------ATGGAGCG---------------------G------------AGTCAC--AGCCACAGCAGAACTCCTCC------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGTCGGCGCCGGTGGCAATAC---------------------------------------------------------------------------------------------------------------TCCATCACCAGCGSizeHit CountTotal NormTotal
No Reads
droBia1
GGC---------GG-----------------------CGGCGGCG---------------------------GC--------GGCGAGAACAAA-------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAAAAA---------------------------------------------------------------------A-----------------------------AGGCGCASizeHit CountTotal NormTotal
No Reads
droTak1
CGC---------CG-----------------------GAGCCTCG---------------------------TC--------GGGATTCGCGGG---CCTGGCCGACCTGCACAGCAGCCACGAGCAACAGTTGCAGCAGCAGTACGTGCGATCG---------CAGCCCAAGTACC--------------------------------------------------------------AGTGGCTCGACTCTCCAGCGGATTATGCCCAACAGCAGCAGCAAGTGCAA--GTGCAA---------------------------------------------------------------------------CAGCAGC---------------------------------------------------------AGGTGCA---ACAGCAGCAGCAG---------------------------------------------------------------------C-----------------------------AACAACTSizeHit CountTotal NormTotal
No Reads
droEug1
AGC---------AA-----------------------CAAAA----------------------CAGCA---GC--------ATCAGTAGCAGC-------AAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTACATCAACAGCAACAGTAGCAACCGTAG------------------------------------------------------------------------------------------------CTGCT----------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
dm3
AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGCAGCAGCAGCGATGGCAGCAACTCC-------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------C-----------------------------CGCATCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGCAGCAGCAGCGAT..................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGC..............................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTA................................................................................................................................................................................................................................................................................1960.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..C---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A...................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AGCAGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A...................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..C---------AG-----------------------CAGCAGCA---------------------------GC--------AGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............G-----------------------CAGCAGCA---------------------------GC--------AGCAGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A...................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGC---------AG-----------------------CAGCAGCA---------------------------GC--------AGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGG---------GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCAC--AGCCACAGCATAACTCCCCT------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG----------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCAC--AG......................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
........................................CAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AA..............................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.............A-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCA...........................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
..................................................................................................................................................................T---------------------G------------AATCAC--AGCCACAGCATAACTCCCCT------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................2911.00100010000000000000
droSec2
AGG---------GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCAC--AGCCACAGCATAACTCCTCT------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG----------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.GG---------GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
............GA-----------------------CAGCAGCG---------------------------GA----------------------------------------------------------------------------------TGGAGCT---------------------G------------AATCAC--AGC.....................................................................................................................................................................................................................................................................................................................................................................2911.0010100
droYak3
AGCGAAAGCGCAACGTCCACCAGCACGACAACAGGGACATCAGCT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------G------------AATCAC--AGCCACAGCAGAACACCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GCGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................GAACACCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GCGGC.2111.00101000000000
..............GTCCACCAGCACGACAACAGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............................CAACAGGGACATCAGCT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------.............................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...................................................................................................................................................................................................................AGCAGAACACCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GC....2211.00101000000000
...........AACGTCCACCAGCACGACAACAGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.............................AACAGGGACATCAGCT------------------G-------------------------------------------------------------------------------------------ATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................CAGAACACCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GCG...2111.00101000000000
...........................................CT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------G------------AATCAC--AGCCACAGC...............................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
droEre2
GAA---GGCGCCACGTCCACCAGCACGACAACAGCGACAACAGCT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------G------------AATCAC--AGCCACAGCAGAACTCCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GCGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................GCCACAGCAGAACTCCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT.................................................................................................................................................2311.0011000000
..................ACCAGCACGACAACAGCGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....................................................................................................................................................................................................................GCAGAACTCCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------------------------------GC....2111.0010100000
.........................CGACAACAGCGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000020
.....................................................................................................................................................................................................AATCAC--AGCCACAGCAGAACTCCTCC------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................2711.0011000000
................CCACCAGCACGACAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.................................GCGACAACAGCT------------------G-------------------------------------------------------------------------------------------ATGGAGCT---------------------G------------A...............................................................................................................................................................................................................................................................................................................................................................................2311.0010000010

Generated: 05/18/2015 at 12:36 AM