ID:

dwi_1019

 Coordinate:

scf2_1100000004515:2096-2308 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.8 -8.8 -8.6

Flybase annnotation

exon [dwil_GLEANR_2541:1]; CDS [Dwil\GK19937-cds]; exon [dwil_GLEANR_2541:2]; CDS [Dwil\GK19937-cds]; intron [Dwil\GK19937-in]

Repeatable elements

NameClassFamilyStrand
R2_DPsLINER2+
mature
  1. scf2_1100000013250:947-969 +
  2. scf2_1100000004519:128864-128886 -
  3. dwi_1019  scf2_1100000004515:2138-2160 +
  4. scf2_1100000004839:91829-91851 -
  5. scf2_1100000004854:875-897 +
  6. scf2_1100000004854:356636-356658 -
  7. scf2_1100000012553:466-488 +
star
  1. scf2_1100000002673:4038-4059 +
  2. scf2_1100000003344:12781-12802 +
  3. scf2_1100000000909:5103-5124 -
  4. dwi_1019  scf2_1100000004515:2100-2121 +
  5. scf2_1100000004839:91868-91889 -
  6. scf2_1100000004887:24172-24193 +
  7. scf2_1100000012553:428-449 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTAGCCATGCCGTACAAGGGCGGTTTAGTTGTTGTTCCCTTGCTGCATGTGTAGGTAGTTCGAAATGGGGAAATGGAGGTGTTTAGTCCGTAGGCATTAGTATGAATCGGGCATATTTATTGCGACGGCGCATTAGATATCTTTTGAAGATTCACCTACCATGGTTCGATAAACCAAAAAAAAAAAAAAAAAAAAGGGGAGAGGGGGGGGGGGGGGTCTTTTCTTCTTTTTTAAACAAAAACTAATAAATTCTTTTACTTTAGAATGGCCGACCAACAACAACCACCAAAAAAACTCAGCCGTATGTCTTTTG
******************************************************...((((((.........(((..((((((((.....))))))))..)))...))))))...****************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
.....................................................................................................................................................................................................................................................................................AACAACCACCAAAAAAACTCAGCCGTA......... 27 0 1 2.00 2 0 2 0 0
............................................................................................GGCATTAGTATGAATCGGGCATA...................................................................................................................................................................................................... 23 0 7 1.71 12 11 1 0 0
......................................................GTAGTTCGAAATGGGGAAATGG............................................................................................................................................................................................................................................. 22 0 7 1.14 8 8 0 0 0
......................................................GTAGTTCGAAATGGGGAAATGGAGG.......................................................................................................................................................................................................................................... 25 0 7 1.00 7 6 1 0 0
............................................................................................................................................................................................................................................................TTTTACTTTAGAATGGCCGACCAACA................................... 26 0 2 1.00 2 2 0 0 0
............................................................................................................................................................................................................................................................TTTTACTTTAGAATGGCCGACCAACAAC................................. 28 0 2 1.00 2 2 0 0 0
............................................................................................................................................................................................................................................................TTTTACTTTAGAATGGCCGACCA...................................... 23 0 8 0.75 6 6 0 0 0
............................................................................................GGCATTAGTATGAATCGGGCATATT.................................................................................................................................................................................................... 25 0 7 0.71 5 4 0 1 0
.............................................................................................................GGCATATTTATTGCGACGGCGCAT.................................................................................................................................................................................... 24 0 7 0.71 5 5 0 0 0
.............................................................................................................GGCATATTTATTGCGACGGCGCA..................................................................................................................................................................................... 23 0 7 0.71 5 5 0 0 0
............................................................................................................................................................................................................................................................TTTTACTTTAGAATGGCCGACCAA..................................... 24 0 3 0.67 2 2 0 0 0
............................................................................................................................................................................................................................................................TTTTACTTTAGAATGGCCGACC....................................... 22 0 8 0.63 5 5 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGGAG........................................................................................................................................................................................................................................... 23 0 7 0.57 4 4 0 0 0
......................................................GTAGTTCGAAATGGGGAAATGGA............................................................................................................................................................................................................................................ 23 0 7 0.57 4 4 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGGAGG.......................................................................................................................................................................................................................................... 24 0 7 0.57 4 4 0 0 0
..............................................................................................................................................................................................................................................................TTACTTTAGAATGGCCGACCAAC.................................... 23 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................................................................TTTTACTTTAGAATGGCCGACCAACAA.................................. 27 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................................................................................................TTTACTTTAGAATGGCCGACCAAC.................................... 24 0 2 0.50 1 1 0 0 0
...................................................................................................................................................................................................................................................................TTAGAATGGCCGACCAACAACAAT.............................. 24 1 2 0.50 1 1 0 0 0
.........................................................................................................................................TATCTTTTGAAGATTCACCTACC......................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0
...............AAGGGCGGGTTAGTCGTT........................................................................................................................................................................................................................................................................................ 18 2 2 0.50 1 1 0 0 0
............................................................................................GGCATTAGTATGAATCGGGCATAT..................................................................................................................................................................................................... 24 0 7 0.43 3 3 0 0 0
...............................................................................................ATTAGTATGAATCGGGCATATT.................................................................................................................................................................................................... 22 0 7 0.43 3 3 0 0 0
.............................................................................................................................CGGCGCATTAGATATCTTTTGAAGATT................................................................................................................................................................. 27 0 7 0.43 3 2 1 0 0
.........................................................................................GTAGGCATTAGTATGAATCGGG.......................................................................................................................................................................................................... 22 0 8 0.38 3 3 0 0 0
.........................................................................................................................................TATCTTTTGAACATTCACCTACCATG...................................................................................................................................................... 26 1 3 0.33 1 1 0 0 0
.............................................................................................................................CGGCGCATTAGATATCTTTTGAAGATTC................................................................................................................................................................ 28 0 7 0.29 2 2 0 0 0
.............................................................................................................................CGGCGCATTAGATATCTTTTGA...................................................................................................................................................................... 22 0 7 0.29 2 2 0 0 0
.............................................................................................................................CGGCGCATTAGATATCTTTTGAAGAT.................................................................................................................................................................. 26 0 7 0.29 2 1 1 0 0
......................................................GTAGTTCGAAATGGGGAAATGGAG........................................................................................................................................................................................................................................... 24 0 7 0.29 2 1 0 0 1
..................................TTCCCTTGCTGCATGTGTAG................................................................................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0
................................................................................................TTAGTATGAATCGGGCATATTTATTG............................................................................................................................................................................................... 26 0 8 0.25 2 2 0 0 0
......................................................................................TCCGTAGGCATTAGTATGAATCG............................................................................................................................................................................................................ 23 0 8 0.25 2 1 0 1 0
...............................................TGTGTAGGTAGTTCGAAATGGGG................................................................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0
...............................................................................................................................................................................................AAATGGGGAGAGGGCGGGGCGG.................................................................................................... 22 3 4 0.25 1 1 0 0 0
................................................................................................................................................TGAAGATTCACCTACCATGGTTCG................................................................................................................................................. 24 0 8 0.25 2 2 0 0 0
......................................................................................TCCGTAGGCATTAGTATGAACCG............................................................................................................................................................................................................ 23 1 8 0.25 2 0 0 2 0
............................................................................................GGCATTAGTATGAATCGGGCA........................................................................................................................................................................................................ 21 0 8 0.25 2 2 0 0 0
............................................................................................................................................................................................AAAGAAAGTGGAGAGGGGGGAGGG..................................................................................................... 24 3 5 0.20 1 0 1 0 0
...............................................................................................ATTAGTATGAATCGGGCATATTTA.................................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0
............................................................................................GGCATTAGTATGAATCGGGCATATTTA.................................................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0
..........................................................................................................................CGACGGCGCATTAGATATCTTTTG....................................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGGAGGTG........................................................................................................................................................................................................................................ 26 0 6 0.17 1 1 0 0 0
..........................................................................................................................CGACGGCGCATTAGATATCTTTTGAAGA................................................................................................................................................................... 28 0 6 0.17 1 1 0 0 0
......................................................GTGGTTCGAAATGGGGAAATGGAGG.......................................................................................................................................................................................................................................... 25 1 7 0.14 1 0 1 0 0
......................................................GTAGTTCGAAATGGGGAAATGGAGGT......................................................................................................................................................................................................................................... 26 0 7 0.14 1 0 1 0 0
......................................................GTAGTTCGAAATGGGGAAATGGAA........................................................................................................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGGGGGT......................................................................................................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGGA............................................................................................................................................................................................................................................ 22 0 7 0.14 1 1 0 0 0
.............................................................................................GCATTAGTATGAATCGGGCATA...................................................................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGG............................................................................................................................................................................................................................................. 21 0 7 0.14 1 0 1 0 0
......................................................GTAGTTCGAAAAGGGGAAATGG............................................................................................................................................................................................................................................. 22 1 7 0.14 1 1 0 0 0
.......................................................TAGTTCGAAATGGGGAAATGGAGGT......................................................................................................................................................................................................................................... 25 0 7 0.14 1 0 1 0 0
.............................................................................................................................CGGCGCATTAGATATCTTTTGAAGA................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0
............................................................................................GGCATTAGTATGAATCGGGCAT....................................................................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0
..................................................................................TTAGTCCGTAGGCATTAGTATGAA............................................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0
.................................................................................................................................................GAAGATTCACCTACCATGGTTCGA................................................................................................................................................ 24 0 8 0.13 1 1 0 0 0
............................................................................................................GGGCATATTTATTGCGAC........................................................................................................................................................................................... 18 0 8 0.13 1 1 0 0 0
..........................................................TTCGAAATGGGGAAATGGAGGTGT....................................................................................................................................................................................................................................... 24 0 8 0.13 1 0 0 0 1
...................................................................................................................................ATTAGATATCTTTTGAAGATT................................................................................................................................................................. 21 0 8 0.13 1 0 1 0 0
..................................................................................TTAGTCCGTAGGCATTAGTATG................................................................................................................................................................................................................. 22 0 8 0.13 1 1 0 0 0
...................................................................................TAGTCCGTAGGCATTAGTATGAATTA............................................................................................................................................................................................................ 26 2 8 0.13 1 0 1 0 0
...............................................................................TGTTTAGTCCGTAGGCATTAGTATGAA............................................................................................................................................................................................................... 27 0 8 0.13 1 0 1 0 0
............................................................................................GGCATTAGTATGAATCGGGC......................................................................................................................................................................................................... 20 0 8 0.13 1 1 0 0 0
................................................................................................................................................TGAAGATTCACCTACCATGGTTCGA................................................................................................................................................ 25 0 8 0.13 1 1 0 0 0
..........................................................................................................................................................................................................................................................TCTTTTACTTTAGAATGGCCGACC....................................... 24 0 8 0.13 1 0 0 1 0
..........................................................................................TAGGCATTAGTATGAATCGGGCA........................................................................................................................................................................................................ 23 0 8 0.13 1 1 0 0 0
.................................................................................................................................GCATTAGATATCTTTTGAAGATT................................................................................................................................................................. 23 0 8 0.13 1 0 1 0 0
................................................................................................................................................TGAAGATTCACCTACCATGGTTC.................................................................................................................................................. 23 0 8 0.13 1 0 1 0 0
.....................................................................................................................................................................................................................................................TAAATTCTTTTACTTTAGAATAGCCGA......................................... 27 1 9 0.11 1 1 0 0 0
.................................................................TGGGGAAATGGAGGTGTTTAG................................................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0
................................................................................................................................................TGAAGATTCACCTACCATGGTT................................................................................................................................................... 22 0 9 0.11 1 1 0 0 0
............................................................................................................................................CTTTTGAAGATTCACCTACCATGG..................................................................................................................................................... 24 0 9 0.11 1 1 0 0 0
........................................................AGTTCGAAATGGGGAAATGGAGG.......................................................................................................................................................................................................................................... 23 0 9 0.11 1 1 0 0 0
...............................................................AATGGGGAAATGGAGGTGTTTAGTCT................................................................................................................................................................................................................................ 26 1 9 0.11 1 0 0 0 1
.......................................................................................................................................................................................................................................................AATTCTTTTACTTTAGAATGGCCG.......................................... 24 0 9 0.11 1 1 0 0 0
......................................................GGAGTTCGAAATGGGGAAATGGA............................................................................................................................................................................................................................................ 23 1 9 0.11 1 1 0 0 0
..............................................................................................................GCATATTTATTGCGACGGCGCATT................................................................................................................................................................................... 24 0 9 0.11 1 1 0 0 0
........................................................AGTTCGAAATGGGGAAATGGA............................................................................................................................................................................................................................................ 21 0 9 0.11 1 0 1 0 0
..AGCCATGCCGCCCGAGGGC.................................................................................................................................................................................................................................................................................................... 19 3 10 0.10 1 1 0 0 0
................................................................................................TTAGTATGAATCGGGCATATTTATT................................................................................................................................................................................................ 25 0 10 0.10 1 1 0 0 0
.............................................................................................................................................TTTTGAAGATTCACCTACCATG...................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0
......................................................GTAGTTCGAAATGCGGAAATGGA............................................................................................................................................................................................................................................ 23 1 10 0.10 1 1 0 0 0
...............................................................................................................................................................................................................................................................TACTTTAGAATGGCCGACCA...................................... 20 0 10 0.10 1 0 1 0 0
...........................................................................GAGGTGTTTAGTCCGTAGGCATT....................................................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0
..............................................................AAATGGGGAAATGGAGGTGTTTA.................................................................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0
..........................................................................................................................................................................................AAGAAATAAGGGGAGAGGG............................................................................................................ 19 2 11 0.09 1 1 0 0 0
..............................................................AAATGGGGAAATGGAGGTGTT...................................................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0
....................................................................................................................................................GATTGGCCTACCATGGTT................................................................................................................................................... 18 2 12 0.08 1 1 0 0 0
...................................................................GGGAAATGGAGGTGTTTAG................................................................................................................................................................................................................................... 19 0 12 0.08 1 1 0 0 0
.................................................................................................................................................................................................AAGGGGAGAACGGGAGGGGGGG.................................................................................................. 22 3 12 0.08 1 1 0 0 0
.............................................................................................................................CGGCGCATTAGACATCTTTTGAAGA................................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0
.......................................................................AATGGAGGTGTTTAGTCCGTAG............................................................................................................................................................................................................................ 22 0 18 0.06 1 1 0 0 0
.........................................................................TGGAGGTGTTTAGTACGTAGG........................................................................................................................................................................................................................... 21 1 19 0.05 1 0 1 0 0
.........................................................................TGGAGGTGTTTAGTCCGTAGG........................................................................................................................................................................................................................... 21 0 19 0.05 1 0 1 0 0
........................................................................................................................................................................ATAATCCAAAAAAAAAAAAAAAA.......................................................................................................................... 23 1 20 0.05 1 1 0 0 0
..................................................................................................................................................AGGATTGGCCTACCATGGT.................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0
...........................................................................GAGGTGTTTAGTCCGTAGGCGT........................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0
...........................................................................GAGGTGTTTAGTCCGTAGGCA......................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

CATCGGTACGGCATGTTCCCGCCAAATCAACAACAAGGGAACGACGTACACATCCATCAAGCTTTACCCCTTTACCTCCACAAATCAGGCATCCGTAATCATACTTAGCCCGTATAAATAACGCTGCCGCGTAATCTATAGAAAACTTCTAAGTGGATGGTACCAAGCTATTTGGTTTTTTTTTTTTTTTTTTTTCCCCTCTCCCCCCCCCCCCCCAGAAAAGAAGAAAAAATTTGTTTTTGATTATTTAAGAAAATGAAATCTTACCGGCTGGTTGTTGTTGGTGGTTTTTTTGAGTCGGCATACAGAAAAC
******************************************************************************************************************************************************************************************************...((((((.........(((..((((((((.....))))))))..)))...))))))...****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
.............................................................................CCACAAATCAGGCATCCGTAATCAT................................................................................................................................................................................................................... 25 0 11 39.73 437 428 3 2 4 0
.............................................................................CCACAAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 28 0 8 29.00 232 222 7 0 3 0
.............................................................................CCACAAATCAGGCATCCGTAATCATACTT............................................................................................................................................................................................................... 29 0 8 18.00 144 139 1 0 4 0
......................................GAACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 26 0 6 15.00 90 64 25 0 0 1
.....................................GGAACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 27 0 3 12.33 37 28 9 0 0 0
......................................GAACGACGTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 27 0 6 10.67 64 38 25 0 0 1
............................................................................................CCGTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 27 0 5 9.00 45 41 4 0 0 0
.................................................................................................................................................................................................................................................................GAAATCTTACCGGCTGGTTGTTGT................................ 24 0 2 5.50 11 0 10 1 0 0
.............................................................................CCACAAATCAGGCATCCGTAATCATAC................................................................................................................................................................................................................. 27 0 8 4.13 33 32 1 0 0 0
................................................................................................................................................................................................................................................................................................TTTTTTGAGTCGGCATACAGAAAAC 25 0 1 4.00 4 4 0 0 0 0
....................................GGGAACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 28 0 2 4.00 8 8 0 0 0 0
........................................................................TACCTCCACAAATCAGGCATCCGTAAT...................................................................................................................................................................................................................... 27 0 10 3.90 39 38 1 0 0 0
.............................................................................CCACAAATCAGGCATCCGTAATCA.................................................................................................................................................................................................................... 24 0 11 3.82 42 42 0 0 0 0
...................................................................CCCTTTACCTCCACAAATCAGGCAT............................................................................................................................................................................................................................. 25 0 11 3.45 38 37 1 0 0 0
.........................................................CAAGCTTTACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 28 0 8 3.38 27 27 0 0 0 0
..........................................................................................................AGCCCGTATAAATAACGCTGCCGCGT..................................................................................................................................................................................... 26 0 7 3.29 23 14 9 0 0 0
................................................................................................................................................ACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 25 0 8 3.00 24 10 14 0 0 0
.......................................................................................................................................................................................................................................................................................GTTGGTGGTTTTTTTGAGTCGGCAT......... 25 0 1 3.00 3 2 1 0 0 0
..............................................................................CACAAATCAGGCATCCGTAATCATACTT............................................................................................................................................................................................................... 28 0 8 2.75 22 19 3 0 0 0
.....................................GGAACGACGTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 28 0 3 2.67 8 7 1 0 0 0
...........................................................................CTCCACAAATCAGGCATCCGTAATCAT................................................................................................................................................................................................................... 27 0 11 2.55 28 25 0 0 3 0
.............................................................................................................................................AAAACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 28 0 8 2.38 19 14 5 0 0 0
.....................................................................................CAGGCATCCGTAATCATACTTAGCCCGT........................................................................................................................................................................................................ 28 0 7 2.29 16 16 0 0 0 0
.......................................................................TTACCTCCACAAATCAGGCATCCGT......................................................................................................................................................................................................................... 25 0 18 2.28 41 41 0 0 0 0
...............................................ACACATCCATCAAGCTTTACCCCTT................................................................................................................................................................................................................................................. 25 0 4 2.25 9 9 0 0 0 0
........................................ACGACGTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 25 0 6 2.17 13 7 6 0 0 0
.......................................AACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 25 0 6 2.17 13 7 6 0 0 0
........................................................................TACCTCCACAAATCAGGCATCCGT......................................................................................................................................................................................................................... 24 0 19 2.16 41 41 0 0 0 0
............................................................................................................................TGCCGCGTAATCTATAGAAAACTTCT................................................................................................................................................................... 26 0 7 2.00 14 7 6 1 0 0
.......ACGGCATGTTCCCGCCAAATCAACAAC....................................................................................................................................................................................................................................................................................... 27 0 2 2.00 4 3 1 0 0 0
.........................................................................ACCTCCACAAATCAGGCATCCGTAAT...................................................................................................................................................................................................................... 26 0 10 2.00 20 18 0 0 2 0
.........................................................................................................................................................................................................................................................................ACCGGCTGGTTGTTGTTGGTGGT......................... 23 0 1 2.00 2 0 2 0 0 0
.................................................................................................................................................................................................................................................................GAAATCTTACCGGCTGGTTGTTGTT............................... 25 0 2 2.00 4 1 2 1 0 0
..............................................................................CACAAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 27 0 8 1.88 15 13 2 0 0 0
.....................................................CCATCAAGCTTTACCCCTTTACCT............................................................................................................................................................................................................................................ 24 0 6 1.50 9 9 0 0 0 0
........................................................TCAAGCTTTACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 29 0 8 1.50 12 11 1 0 0 0
.............................................................................................CGTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 26 0 5 1.40 7 6 1 0 0 0
............................................................................TCCACAAATCAGGCATCCGTAATCAT................................................................................................................................................................................................................... 26 0 11 1.36 15 14 1 0 0 0
................................................................................CAAATCAGGCATCCGTAATCATACTT............................................................................................................................................................................................................... 26 0 8 1.25 10 10 0 0 0 0
.............................................................................CCACAAATCAGGCATCCGTAATCATA.................................................................................................................................................................................................................. 26 0 11 1.18 13 12 1 0 0 0
.......................................AACGACGTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 26 0 6 1.17 7 5 2 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAAAACT...................................................................................................................................................................... 28 0 6 1.17 7 6 1 0 0 0
......................................GAACGACGTACACATCCATCAAGCT.......................................................................................................................................................................................................................................................... 25 0 6 1.17 7 7 0 0 0 0
........................................ACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 24 0 6 1.17 7 5 2 0 0 0
..........................................................................................................................GCTGCCGCGTAATCTATAGAAAACTTCT................................................................................................................................................................... 28 0 6 1.17 7 3 4 0 0 0
................................................................................CAAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 25 0 8 1.13 9 9 0 0 0 0
...............................................................................ACAAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 26 0 8 1.13 9 9 0 0 0 0
..............................................................................................................................................AAACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 27 0 8 1.13 9 6 3 0 0 0
...............................................................................................................................................................................................................CCCCCCCCCAGAAAAGAAGAAAAAAT................................................................................ 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................GTTACCGGCTGGTTGTTGTTGGTGGT......................... 26 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................GTGGTTTTTTTGAGTCGGCATACAG..... 25 0 1 1.00 1 0 1 0 0 0
........CGGCATGTTCCCGCCAAATCAACAA........................................................................................................................................................................................................................................................................................ 25 0 2 1.00 2 2 0 0 0 0
...............................................................................................................................................................................................................................................................................................TTTTTTTGAGTCGGCATACAGAAAAC 26 0 1 1.00 1 0 1 0 0 0
.........................................................................................................TAGCCCGTATAAATAACGCTGCCGCGT..................................................................................................................................................................................... 27 0 7 1.00 7 7 0 0 0 0
.......ACGGCATGTTCCCGCCAAATCAAC.......................................................................................................................................................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................................GCTGGTTGTTGTTGGTGGTTTTT..................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................CCGGCTGGTTGTTGTTGGTGGT......................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................AATCTTACCGGCTGGTTGTTGTTGGT............................ 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................TCTTACCGGCTGGTTGTTGTTGGT............................ 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................GGCTGGTTGTTGTTGGTGGTT........................ 21 0 1 1.00 1 0 0 0 0 1
....................................................................................................................................................................................................................................................................................GTTGTTGGTGGTTTTTTTGAG................ 21 0 1 1.00 1 0 1 0 0 0
...........................CAACAACAAGGGAACGACGTACACAT.................................................................................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
................................................................................................................................................................................................................................................................................................TTTTTTGAGTCGGAATACAGAAAAC 25 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................CAAGCTATTTGGTTTTTTTTTTTTT............................................................................................................................. 25 0 3 1.00 3 0 3 0 0 0
.......................................................................................................................................................................................................................................................................TTACCGGCTGGTTGTTGTTGGTGGT......................... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................CCCGTATAAATAACGCTGCCGCGTAAT.................................................................................................................................................................................. 27 0 7 1.00 7 2 5 0 0 0
...............................................................................ACAAATCAGGCATCCGTAATCATACTT............................................................................................................................................................................................................... 27 0 8 1.00 8 7 1 0 0 0
.........................................................................................................................................................................................................................................................................................TGGTGGTTTTTTTGAGTCGGCATACAG..... 27 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................TATACCGGCTGGTTGTTGTTGGTGGT......................... 26 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................TACCGGCTGGTTGTTGTTGGTGGT......................... 24 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................................ACGGCTGGTTGTTGTTGGTGGT......................... 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................ATACCGGCTGGTTGTTGTTGGTGGT......................... 25 1 1 1.00 1 1 0 0 0 0
............................................CGTACACATCCATCAAGCTTTACCCCTT................................................................................................................................................................................................................................................. 28 0 3 1.00 3 3 0 0 0 0
......................................................................................................................................................................................................................................................................GATACCGGCTGGTTGTTGTTGGTGGT......................... 26 2 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................................................TGAAATCTTACCGGCTGGTTGTTGT................................ 25 0 2 1.00 2 0 2 0 0 0
....................................................................................................................................................................................................................................................................................ACTGTTGGTGGTTTTTTTGAGTCGGCAT......... 28 2 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................CAAGCTATTTGGTTTTTTTTTTTT.............................................................................................................................. 24 0 3 1.00 3 0 3 0 0 0
............................................................................................................................................................................................................................................................................................TGGTTTTTTTGAGTCGGCATACAG..... 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................CCCCCCCCCCAGAAAAGAAGAAAAAAT................................................................................ 27 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................AGAAAACTTCTAAGTGGATGGTAC...................................................................................................................................................... 24 0 10 0.90 9 2 7 0 0 0
.......................................................................................................................................................................................................................................................TTAAGAAAATGAAATCTTACCGGCTGGT...................................... 28 0 8 0.88 7 6 1 0 0 0
........................................................................................GCATCCGTAATCATACTTAGCCCGTAT...................................................................................................................................................................................................... 27 0 7 0.86 6 6 0 0 0 0
...................................................................................................................................................................CAAGCTTTTTGGTTTTTTTTTTTTTT............................................................................................................................ 26 1 6 0.83 5 1 4 0 0 0
.......................................................................TTACCTCCACAAATCAGGCATCCGTAAT...................................................................................................................................................................................................................... 28 0 10 0.80 8 8 0 0 0 0
..............................................................................................GTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 25 0 5 0.80 4 4 0 0 0 0
................................................................TACCCCTTTACCTCCACAAATCAGGCAT............................................................................................................................................................................................................................. 28 0 8 0.75 6 6 0 0 0 0
........................................................................................................................................TATAGAAAACTTCTAAGTGGATGGT........................................................................................................................................................ 25 0 4 0.75 3 3 0 0 0 0
....................................................................................TCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 21 0 8 0.75 6 5 0 0 1 0
.................................................................................AAATCAGGCATCCGTAATCATACTT............................................................................................................................................................................................................... 25 0 8 0.75 6 5 1 0 0 0
...............................................ACACATCCATCAAGCTTTACCCCT.................................................................................................................................................................................................................................................. 24 0 4 0.75 3 3 0 0 0 0
..............................................................................CACAAATCAGGCATCCGTAATCAT................................................................................................................................................................................................................... 24 0 11 0.73 8 8 0 0 0 0
..........................................................................................................AGCCCGTATAAATAACGCTGCCGCGTAAT.................................................................................................................................................................................. 29 0 7 0.71 5 5 0 0 0 0
...........................................................................................................................................AGAAAACTTCTAAGTGGATGGTACCA.................................................................................................................................................... 26 0 9 0.67 6 2 4 0 0 0
...............................................................................................................................................AACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 26 0 8 0.63 5 3 1 1 0 0
.....................................................................................CAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 20 0 8 0.63 5 5 0 0 0 0
.................................................................................................................ATAAATAACGCTGCCGCGTAATCTATAG............................................................................................................................................................................ 28 0 5 0.60 3 3 0 0 0 0
....................................................................CCTTTACCTCCACAAATCAGGCATCCGT......................................................................................................................................................................................................................... 28 0 12 0.58 7 7 0 0 0 0
.......................................................................................GGCATCCGTAATCATACTTAGCCCGTAT...................................................................................................................................................................................................... 28 0 7 0.57 4 4 0 0 0 0
...................................................................CCCTTTACCTCCACAAATCAGGCATCCGT......................................................................................................................................................................................................................... 29 0 9 0.56 5 5 0 0 0 0
....................................GGGAACGACGTACACATCCATCAAGCT.......................................................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.....GTACGGCATGTTCCCGCCAAATCAA........................................................................................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...CGGTACGGCATGTTCCCGCCAAA............................................................................................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.................CCCGCCAAATCAACAACAAGGGAACGA............................................................................................................................................................................................................................................................................. 27 0 2 0.50 1 0 1 0 0 0
............................................................................................................CCCGTATAAATAACGCTGCCGCGTAATC................................................................................................................................................................................. 28 0 4 0.50 2 1 1 0 0 0
...................................................................................................CATACTTAGCCCGTATAAATAACACT............................................................................................................................................................................................ 26 1 8 0.50 4 4 0 0 0 0
..................................................................................................................................................................................................................CCCCCCAGAAAAGAAGAAAAAATTTGTTT.......................................................................... 29 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................GCCGCGTAATCTATAGAAAACTTCTAAGT............................................................................................................................................................... 29 0 4 0.50 2 2 0 0 0 0
...........................CAACAACAAGGGAACGACGT.......................................................................................................................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0
......................................................................................AGGCATCCGTAATCATACTTAGCCCGT........................................................................................................................................................................................................ 27 0 8 0.50 4 4 0 0 0 0
....................................GGGAACGACGTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................CGCTGCCGCGTAATCTATAGAAAACTT..................................................................................................................................................................... 27 0 6 0.50 3 2 1 0 0 0
.........................................................................................................................CGCTGCCGCGTAATCTATAGAAAACT...................................................................................................................................................................... 26 0 6 0.50 3 3 0 0 0 0
..........................................................AAGCTTTACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 27 0 8 0.50 4 4 0 0 0 0
...CGGTACGGCATGTTCCCGCCAAATCA............................................................................................................................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0
.............................................................................................................CCGTATAAATAACGCTGCCGCGTAATC................................................................................................................................................................................. 27 0 4 0.50 2 1 1 0 0 0
...................................................................................................................................................................CAAGCTATTTGGTTTTTTTTTTTTTTAT.......................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0
...CGGTACGGCATGTTCCCGCCAAAT.............................................................................................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
........................................................................................................................ACGCTGCCGCGTAATCTATAGAAAACT...................................................................................................................................................................... 27 0 6 0.50 3 2 1 0 0 0
...CGGTACGGCATGTTCCCGCCAAATCAA........................................................................................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..............GTTCCCGCCAAATCAACAACAAGG................................................................................................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.....................................................................................CAGGCATCCGTAATCATACTT............................................................................................................................................................................................................... 21 0 8 0.50 4 4 0 0 0 0
.................................................................................................................................................................................................................................................................GAAATCTTACCGGCTGGTTGTT.................................. 22 0 2 0.50 1 0 0 1 0 0
......................CAAATCAACAACAAGGGAACGACGT.......................................................................................................................................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0
.........................................CGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 23 0 6 0.50 3 3 0 0 0 0
.....................................................................................................................................................................................................................................................................TCTTACCGGCTGGTTGTTGT................................ 20 0 2 0.50 1 0 1 0 0 0
.......ACGGCATGTTCCCGCCAAATCAACA......................................................................................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................................................TAAGAAAATGAAATCTTACCGGCTGGT...................................... 27 0 8 0.50 4 1 3 0 0 0
............................................................................................................................................GAAAACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 29 0 8 0.50 4 4 0 0 0 0
............................................................................................................................................................................................................................................................AGATTGAAATCTTACCGGCTGGTTGT................................... 26 2 2 0.50 1 0 0 1 0 0
.................................................................ACCCCTTTACCTCCACAAATCAGGCAT............................................................................................................................................................................................................................. 27 0 8 0.50 4 3 1 0 0 0
..............................................................................................................................................................................................................TCCCCCCCCCAGAAAAGAAGAAAAAAT................................................................................ 27 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................AAAATGAAATCTTACCGGCTGGTTGT................................... 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................AATGAAATCTTACCGGCTGGTTGTT.................................. 25 0 2 0.50 1 0 1 0 0 0
...............................AACAAGGGAACGACGTACACATCCAT................................................................................................................................................................................................................................................................ 26 0 2 0.50 1 0 1 0 0 0
.........................................................CAAGCTTTACCCCTTTACCTCCACAAA..................................................................................................................................................................................................................................... 27 0 8 0.50 4 4 0 0 0 0
......................................................................TTTACCTCCACAAATCAGGCATCCGT......................................................................................................................................................................................................................... 26 0 13 0.46 6 6 0 0 0 0
.............................................................................................................CCGTATAAATAACGCTGCCGCGTAAT.................................................................................................................................................................................. 26 0 7 0.43 3 1 2 0 0 0
..........................................................................................................AGCCCGTATAAATAACACTGCCGCGT..................................................................................................................................................................................... 26 1 7 0.43 3 3 0 0 0 0
............................................................................................................................TGCCGCGTAATCTATAGAAAACTT..................................................................................................................................................................... 24 0 7 0.43 3 2 1 0 0 0
............................................................................................CCGTAATCATACTTAGCCCGTATAAA................................................................................................................................................................................................... 26 0 7 0.43 3 3 0 0 0 0
.........................................................................ACCTCCACAAATCAGGCATCCGTAA....................................................................................................................................................................................................................... 25 0 10 0.40 4 4 0 0 0 0
..........................................................................CCTCCACAAATCAGGCATCCGTAAT...................................................................................................................................................................................................................... 25 0 10 0.40 4 4 0 0 0 0
.................................................................................................................ATAAATAACACTGCCGCGTAATCTATAG............................................................................................................................................................................ 28 1 5 0.40 2 2 0 0 0 0
...........................................................................................TCCGTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 28 0 5 0.40 2 2 0 0 0 0
.........................................................................ACCTCCACAAATCAGGCATCCGTAATCAT................................................................................................................................................................................................................... 29 0 10 0.40 4 4 0 0 0 0
.............................................................................CCACAAATCAGGCATCAGTAATCATACT................................................................................................................................................................................................................ 28 1 8 0.38 3 3 0 0 0 0
............................................................................TCCACAAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 29 0 8 0.38 3 3 0 0 0 0
...........................................................AGCTTTACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 26 0 8 0.38 3 3 0 0 0 0
..................................................................CCCCTTTACCTCCACAAATCAGGCAT............................................................................................................................................................................................................................. 26 0 8 0.38 3 3 0 0 0 0
................................................................TACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 21 0 11 0.36 4 4 0 0 0 0
.............................................................................CCACAAATCAGGCATCCGTAAT...................................................................................................................................................................................................................... 22 0 11 0.36 4 4 0 0 0 0
...........................................................................................................................................AGAAAACTTCTAAGTGGATGGTACC..................................................................................................................................................... 25 0 9 0.33 3 1 2 0 0 0
.......................................................................................................................................CTATAGAAAACTTCTAAGTGGATGG......................................................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0
................................................................................................................................................ACTTCTAAGTGGATGGTACCAAGTT................................................................................................................................................ 25 1 9 0.33 3 2 1 0 0 0
..............................................................................................................................................................................................................................................TTTGATTATTTAAGAAAATGAAAT................................................... 24 0 3 0.33 1 0 1 0 0 0
...................................................ATCCATCAAGCTTTACCCCTTTACCT............................................................................................................................................................................................................................................ 26 0 6 0.33 2 2 0 0 0 0
......................................GAACGACGTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 29 0 6 0.33 2 2 0 0 0 0
..........................................................................................................................GCTGCCGCGTAATCTATAGAAAACT...................................................................................................................................................................... 25 0 6 0.33 2 1 1 0 0 0
........................................ACGACGTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 27 0 6 0.33 2 2 0 0 0 0
.........................................CGACGTACACACCCATCAAGCTTTACC..................................................................................................................................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0
...................................................................................................................................................................CAGGCTATTTGGTTTTTTTTTTTTTT............................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
.........................................CGACGTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 26 0 6 0.33 2 2 0 0 0 0
......................................GAACGACGTACACATCCATCAAGC........................................................................................................................................................................................................................................................... 24 0 6 0.33 2 2 0 0 0 0
.....................................GGAACGACGTACACATCCAT................................................................................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0
....................................CGGAACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 28 1 3 0.33 1 1 0 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAAAAC....................................................................................................................................................................... 27 0 6 0.33 2 2 0 0 0 0
.....................................GGAACGACGTACACATCCATCAAGC........................................................................................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0
.....................................GGAACGACGTACACATCCATCAAGCT.......................................................................................................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0
.........................................................................................................................CGCTGCCGCGTAATCTATAGAAAACTTCT................................................................................................................................................................... 29 0 6 0.33 2 2 0 0 0 0
...............................................................................................................................................................................................................................................TTGATTATTTAAGAAAATGAAAT................................................... 23 0 3 0.33 1 1 0 0 0 0
.......................................AACGACGTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 28 0 6 0.33 2 2 0 0 0 0
.................................................................................................................................................................ACCAAGCTATTTGGTTTTTTTTTT................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0
.......................................................................TTACCTCCACAAATCAGGCATCCGTAA....................................................................................................................................................................................................................... 27 0 10 0.30 3 3 0 0 0 0
........................................................................TACCTCCACAAATCAGGCATCCGTAA....................................................................................................................................................................................................................... 26 0 10 0.30 3 3 0 0 0 0
............................................................................................................CCCGTATAAATAACGCTGCCGCGT..................................................................................................................................................................................... 24 0 7 0.29 2 1 1 0 0 0
..........................................................................................................AGCCCGTATAAATAACACTGCCGCGTAAT.................................................................................................................................................................................. 29 1 7 0.29 2 2 0 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAAAA........................................................................................................................................................................ 26 0 7 0.29 2 1 1 0 0 0
...........................................................................................................GCCCGTATAAATAACGCTGCCGCGTAAT.................................................................................................................................................................................. 28 0 7 0.29 2 2 0 0 0 0
....................................................................CCTTTACCTCCACAAATCAGGCAT............................................................................................................................................................................................................................. 24 0 14 0.29 4 4 0 0 0 0
........................................................................................................TTAGCCCGTATAAATAACGCTGCCGCGT..................................................................................................................................................................................... 28 0 7 0.29 2 2 0 0 0 0
..........................................................................................ATCCGTAATCATACTTAGCCCGTAT...................................................................................................................................................................................................... 25 0 7 0.29 2 2 0 0 0 0
..................................................................CCCCTTTACCTCCACAAATCAGGCATCC........................................................................................................................................................................................................................... 28 0 7 0.29 2 2 0 0 0 0
.....................................................................................CAGGCATCCGTAATCATACTTAG............................................................................................................................................................................................................. 23 0 7 0.29 2 1 1 0 0 0
.............................................................................................................CCGTATAAATAACACTGCCGCGTAAT.................................................................................................................................................................................. 26 1 7 0.29 2 0 2 0 0 0
.............................................................................................................................GCCGCGTAATCTATAGAAAACTTCTA.................................................................................................................................................................. 26 0 7 0.29 2 2 0 0 0 0
........................................................................................................................................TATAGAAAACTTCTAAGTGGATGGTA....................................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0
.............................................................................CCACAAATCAGGCATCGGTAATCATACT................................................................................................................................................................................................................ 28 1 8 0.25 2 2 0 0 0 0
...............................AACAAGGGAACGACGTACACAT.................................................................................................................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
.............................................................................CCACAAATCAGGCATCCGTA........................................................................................................................................................................................................................ 20 0 20 0.25 5 5 0 0 0 0
...................................................................................ATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 22 0 8 0.25 2 2 0 0 0 0
..............................CAACAAGGGAACGACGTACACATC................................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
............................................................................................................CCCGTATAAATAACGCTGCCGCGTAATCT................................................................................................................................................................................ 29 0 4 0.25 1 0 1 0 0 0
..............................................................................CACAAATCAGGCATCCGTAATCATAC................................................................................................................................................................................................................. 26 0 8 0.25 2 2 0 0 0 0
.......................................................................................................................................CTATAGAAAACTTCTAAGTGGAT........................................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0
.....................................................................................................................................................ATAGTGGATGGTACCAAGCTATTTGGT......................................................................................................................................... 27 2 4 0.25 1 1 0 0 0 0
.................................................................................AAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 24 0 8 0.25 2 2 0 0 0 0
........................................................................................................................................TATAGAAAACTTCTGAGTGGATGGTA....................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
...............................................................................................................................CGCGTAATCTATAGAAAACTTCTAAGT............................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
...........................................................................................................GCCCGTATAAATAACGCTGCCGCGTAATC................................................................................................................................................................................. 29 0 4 0.25 1 1 0 0 0 0
...............................................ACACATCCATCAAGCTTTACCCCTTTAC.............................................................................................................................................................................................................................................. 28 0 4 0.25 1 1 0 0 0 0
..............................CAACAAGGGAACGACGTACACATCC.................................................................................................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0
..............................................................................................GTAATCATACTTAGCCCGTATAAATAAC............................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0
.............................................................................................................................................AAAACTTCTAAGTGGATGGTACCAAGTT................................................................................................................................................ 28 1 9 0.22 2 2 0 0 0 0
...........................................................................................................................................AGAAAACTTCTAAGTGGATGGTACCAA................................................................................................................................................... 27 0 9 0.22 2 0 2 0 0 0
..........................................................................CCTCCACAAATCAGGCATCCGTAA....................................................................................................................................................................................................................... 24 0 10 0.20 2 2 0 0 0 0
............................................................................................................CCCGTATAAATAATGCTGCCGCGTAATC................................................................................................................................................................................. 28 1 5 0.20 1 0 1 0 0 0
...............................................................................................................GTATAAATAACGCTGCCGCGTAATC................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0
.................................................................................................................ATAAATAACGCTGCCGCGTAATCTAT.............................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0
..........................................................................................ATCCGTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 29 0 5 0.20 1 1 0 0 0 0
.................................................................................................................ATAAATAACACTGCCGCGTAATCTA............................................................................................................................................................................... 25 1 5 0.20 1 1 0 0 0 0
............................................................................................TCGTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 27 1 5 0.20 1 0 0 1 0 0
.................................................................................................................ATAAATAACACTGCCGCGTAATCT................................................................................................................................................................................ 24 1 5 0.20 1 1 0 0 0 0
..............................................................................................................CGTATAAATAACGCTGCCGCGTAATCT................................................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0
............................................................................................CTGTAATCATACTTAGCCCGTATAAAT.................................................................................................................................................................................................. 27 1 5 0.20 1 1 0 0 0 0
..........................................................................................................................................TAGAAAACTTCTAAGTGGATGGTAC...................................................................................................................................................... 25 0 10 0.20 2 0 2 0 0 0
...............................................................................................................GTATAAATAACGCTGCCGCGTAATCT................................................................................................................................................................................ 26 0 5 0.20 1 1 0 0 0 0
...........................................................................CTCCACAAATCAGGCATCCGTAATCA.................................................................................................................................................................................................................... 26 0 11 0.18 2 2 0 0 0 0
.............................................................CTTTACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 24 0 11 0.18 2 2 0 0 0 0
...............................................................................ACAAATCAGGCATCCGTAATCAT................................................................................................................................................................................................................... 23 0 11 0.18 2 2 0 0 0 0
.............................................................................CCACAAATCAGGCGTCCGTAATCAT................................................................................................................................................................................................................... 25 1 11 0.18 2 2 0 0 0 0
.............................................................................CCACAAATCAGGGATCCGTAATCA.................................................................................................................................................................................................................... 24 1 11 0.18 2 2 0 0 0 0
...................................................................CCCTTTACCTCCACAAATCAGGCA.............................................................................................................................................................................................................................. 24 0 11 0.18 2 1 1 0 0 0
....................................................TCCATCAAGCTTTATCCCTTTACCT............................................................................................................................................................................................................................................ 25 1 6 0.17 1 1 0 0 0 0
........................................GGAACGTACACATCCATCAAGCT.......................................................................................................................................................................................................................................................... 23 3 6 0.17 1 1 0 0 0 0
....................................................TCCATCAAGCTTTACCCCTTTACCTCCAC........................................................................................................................................................................................................................................ 29 0 6 0.17 1 1 0 0 0 0
........................................................................................................................ACGCTGCCGCGTAATCTATAGAAAAC....................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAAAACTC..................................................................................................................................................................... 29 1 6 0.17 1 1 0 0 0 0
......................................GAACGACGTCCACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 26 1 6 0.17 1 0 1 0 0 0
.............................................GTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 19 0 6 0.17 1 1 0 0 0 0
..........................................................................................................................GCTGCCGCGTAATCTATAGAAAACTT..................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0
.........................................CGACGTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 24 0 6 0.17 1 0 1 0 0 0
............................................CGTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
.........................................................................................................................CGCTGCCGCGTAATCTATAGAAGACTT..................................................................................................................................................................... 27 1 6 0.17 1 1 0 0 0 0
.....................................................CCATCAAGCTTTACCCCTTTACCTCCACG....................................................................................................................................................................................................................................... 29 1 6 0.17 1 1 0 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAAAACTT..................................................................................................................................................................... 29 0 6 0.17 1 1 0 0 0 0
.......................................GACGACGTACACATCCATCAAGCTT......................................................................................................................................................................................................................................................... 25 1 6 0.17 1 1 0 0 0 0
.................................................ACATCCATCAAGCTTTACCCCTTTACCT............................................................................................................................................................................................................................................ 28 0 6 0.17 1 1 0 0 0 0
.................................................ACATCCATCAAGCTTTACCCCTTTACCTG........................................................................................................................................................................................................................................... 29 1 6 0.17 1 1 0 0 0 0
..........................................GACGTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0
..........................................................................................................................GCTGCCGCGTAATCTATAGAAAACTTCTA.................................................................................................................................................................. 29 0 6 0.17 1 1 0 0 0 0
.....................................................CCATCAAGCTTTACCCCTTTACCTCCA......................................................................................................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0
.......................................AACGACGTACACACCCATCAAGCTT......................................................................................................................................................................................................................................................... 25 1 6 0.17 1 0 1 0 0 0
.............................................GTACACATCCATCAAGCTTTAC...................................................................................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0
............................................CGTACACATCCATCAAGC........................................................................................................................................................................................................................................................... 18 0 6 0.17 1 1 0 0 0 0
........................................................................TACCTCCACAAATCAGGCATCCG.......................................................................................................................................................................................................................... 23 0 19 0.16 3 3 0 0 0 0
........................................................................TACCTCCACAAATCAGGCATCCGTA........................................................................................................................................................................................................................ 25 0 19 0.16 3 3 0 0 0 0
......................................................................TTTACCTCCACAAATCAGGCATCCG.......................................................................................................................................................................................................................... 25 0 13 0.15 2 2 0 0 0 0
.............................................................................................................................GCCGCGTAATCTATAGAAAACTTC.................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAAA......................................................................................................................................................................... 25 0 7 0.14 1 0 1 0 0 0
......................................................................................AGGCATCCGTAATCATACTTAGCCCGTAT...................................................................................................................................................................................................... 29 0 7 0.14 1 1 0 0 0 0
............................................................................................CCGTAATCATACTTAGCCCGTA....................................................................................................................................................................................................... 22 0 7 0.14 1 0 1 0 0 0
............................................................................................................CCCGTATAAATAACACTGCCGCGTAAT.................................................................................................................................................................................. 27 1 7 0.14 1 0 1 0 0 0
............................................................................................................................TGCCGCGTAACCTATAGAAAACTTCT................................................................................................................................................................... 26 1 7 0.14 1 0 1 0 0 0
............................................................................................................................TGCCGCGTAATCTATAGAAAACTTCTA.................................................................................................................................................................. 27 0 7 0.14 1 1 0 0 0 0
.....................................................................................CAGGCATCCGTAATCATACTGAG............................................................................................................................................................................................................. 23 1 7 0.14 1 1 0 0 0 0
........................................ACGACTTACACATCCATCAAGCTTT........................................................................................................................................................................................................................................................ 25 1 7 0.14 1 0 1 0 0 0
...............................................ACACATCCATCAAGCTTTA....................................................................................................................................................................................................................................................... 19 0 7 0.14 1 1 0 0 0 0
..........................................................................................................AGCCCGTATAAATAACGCTGCCGCGTAA................................................................................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0
.............................................................................................................................GCCGCGTAATCTATAGAAAACT...................................................................................................................................................................... 22 0 7 0.14 1 0 0 1 0 0
............................................................................................................................TGCCGCGTAATCTATAGAAAACT...................................................................................................................................................................... 23 0 7 0.14 1 0 1 0 0 0
......................................................CATCAAGCTTTACCCCTTTACCTCC.......................................................................................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
.........................................................................................................TAGCCCGTATAAATAACACTGCCGCGT..................................................................................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0
.....................................................................................CAGGCATCCGTAATCATACTTAGCCCG......................................................................................................................................................................................................... 27 0 7 0.14 1 1 0 0 0 0
............................................................................................................................TGCCGCGTAATCTAAAGAAAACTTCT................................................................................................................................................................... 26 1 7 0.14 1 1 0 0 0 0
............................................................................................CCGTAATCATACTTAGCCCGTATAA.................................................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
........................................................................................GCATCCGTAATCATACTTAGCCCGTA....................................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
.............................................................................................CGTAATCATACTTAGCCCGTATAAA................................................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
.............................................................................................................CCGTATAAATAACGCTGCCGCGTAA................................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
.............................................................................................................CCGTATAAATAACGCTGCCGCGT..................................................................................................................................................................................... 23 0 7 0.14 1 0 1 0 0 0
..........................................................................................................AGCCCGTATAAATAACGCTGCCGCGTC.................................................................................................................................................................................... 27 1 7 0.14 1 0 1 0 0 0
............................................................................................................................TGCCGCGTAATCTATAGAAAACTTC.................................................................................................................................................................... 25 0 7 0.14 1 0 1 0 0 0
......................................................................................AGGCATCCGTAATCATACTTAGCCCGTA....................................................................................................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0
.............................................................................................................................GCCGCGTAATCTATAGAAAACTTCT................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
.....................................................................................CAGGCATCCGTAATCATACTTAGCCC.......................................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
.............................................................................................................................GCCGCGTAATCTATAGGAAACTTC.................................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0
.......................................................................................................................AACGCTGCCGCGTAATCTATAGAA.......................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
....................................................................................................ATACTTAGCCCGTATAAATAACGCT............................................................................................................................................................................................ 25 0 8 0.13 1 1 0 0 0 0
............................................................................ACCACAAATCAGGCATCCGTAATCATACT................................................................................................................................................................................................................ 29 1 8 0.13 1 1 0 0 0 0
........................................................TCAAGCTTTACCCCTTTACCTCCACAAA..................................................................................................................................................................................................................................... 28 0 8 0.13 1 1 0 0 0 0
...................................................................................................CATACTTAGCCCGTATAAATAACGCT............................................................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0
.............................................................................CCACAAATCAGGCATCCGTAGTCATACT................................................................................................................................................................................................................ 28 1 8 0.13 1 1 0 0 0 0
.............................................................................................................................................AAAACTTCTAAGTGGAGGGTACCAAGCT................................................................................................................................................ 28 1 8 0.13 1 1 0 0 0 0
...........................................................AGCTTTACCCCTTTACCTCCACAGAT.................................................................................................................................................................................................................................... 26 1 8 0.13 1 1 0 0 0 0
............................................................GCTTTACCCCTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0
......................................................................................AGGCATCCGTAATCATACTTAG............................................................................................................................................................................................................. 22 0 8 0.13 1 1 0 0 0 0
...............................................................................................................................................TACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 26 1 8 0.13 1 1 0 0 0 0
.............................................................................................................................................ATAACTTCTAAGTGGATGGTACCAAGCT................................................................................................................................................ 28 1 8 0.13 1 1 0 0 0 0
.............................................................................CCACAAATCAGGTATCCGTAATCATACTT............................................................................................................................................................................................................... 29 1 8 0.13 1 1 0 0 0 0
....................................................................................................ATACTTAGCCCGTATAAATAACGC............................................................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0
.............................................................................CCACAAATCAGGCGTCCGTAATCATACT................................................................................................................................................................................................................ 28 1 8 0.13 1 1 0 0 0 0
.........................................................CAAGCTTTACCCCTTTACCTCCACAA...................................................................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0
........................................................................................................TTAGCCGGTATAAATAACACTGCCGCGT..................................................................................................................................................................................... 28 2 8 0.13 1 1 0 0 0 0
.................................................................................AAATCAGGCATCCGTAATCATACTTA.............................................................................................................................................................................................................. 26 0 8 0.13 1 1 0 0 0 0
...................................................................................................CATACTTAGCCCGTATAAATAACGC............................................................................................................................................................................................. 25 0 8 0.13 1 1 0 0 0 0
................................................................................................................................................AGTTCTAAGAGGATGGTACCAAGCT................................................................................................................................................ 25 2 8 0.13 1 0 1 0 0 0
.............................................................................CCACAAATCAGGCATTCGTAATCATACT................................................................................................................................................................................................................ 28 1 8 0.13 1 1 0 0 0 0
.................................................................ACCCCTTTACCTCCACAAATCAGGCA.............................................................................................................................................................................................................................. 26 0 8 0.13 1 1 0 0 0 0
.........................................................CAAGCTTTACCCTTTTACCTCCACAAAT.................................................................................................................................................................................................................................... 28 1 8 0.13 1 1 0 0 0 0
..................................................................................AATCAGGCATCCGTAATCATACTTA.............................................................................................................................................................................................................. 25 0 8 0.13 1 1 0 0 0 0
...................................................................................................CATACTTAGCCCGTATAAATAAC............................................................................................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0
...........................................................................CTCCACAAATCAGGCATCCGTAATCATAC................................................................................................................................................................................................................. 29 0 8 0.13 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004515:2046-2358 + dwi_1019 GTAGCCATGCCGTACAAGGGCGGTTTAGTTGTTGTTCCCTTGCTGCATGTGT---AGGTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGGTGTTTAGTCCGTAGGCAT------TAGTATGAATCGGGCATATT-TATTGCGACGGCGCATTAG-ATATCTTTTGAAGATTCACCT----ACCATGGTTCGATAAACCAA-AAAAAAAA------------------AAAAAAA--AAAG-----GGGAGAGGGGGGGGGGGGGGTCTTTTCTTCTTTT---TTAAACAAAAACTAATAAA--------TTCTTTTACT--TTAGAATG-------GCCGACCAACAA--CAACCACCAAAAAAAC-TC-------AGCCGTATGTCTT-----------TTG
dp5 XL_group1e:2830110-2830343 + GTAGGTTTACCTTATGAGGGAAATATTTTAGTCATTCCATTGCTTCA----TCATTGTAT-TTAAAATGTATAATATATTCATTACCT----AAAATTAG-TAC------------------------A-----------GATTTTA------------------------CTGGGGGTGTTTAGTCCGTAGGCGTGTTTTTCAACATGAATCGGGCATGCCCTTTAGCGACGGCGTTAAAGAGTATCTTAAGAAGATTCACCTATATACCATGGTCCGCAAAACCAA-AAAAAAAA------------------AAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_186:42871-43209 - GTTGCCCTGCCATATAAAGGAGAACTAGTTTTAGTTCCGTTGTTGCATTTTCTATAGGTT--TATTTGCTA--------------CCTTTACTTATTTTCATTT---------G--------------T-----------AGTATTTTTTGCTTATTTTTAAATTCATAAAATGGAGGTGTTTAGTCCGTAGGCGTAATT-GAATTACGAATCGGGCATATC-TTTAGCGCCTGCGCTAAAG-ATATCTTTGGAAGATTCACCG----GCCAGAGTCCGACAGACCAA-AACAAAAA------------------AAAAAAA--GTAGT----TTGCA--AGAGACG-AATTTTCTTTA--------------------------------------------TATTT-TTAGTATGGAAAATACA-----------ACATTCAACAACAACAATCAAACAATTCGCCGTTTAATCT-----------TTG
droAna3 scaffold_12392:38379-38680 + GTAGCGATGCCATGTAAGGGCGAATTGGTTCTAGCACCATATTTGCATTATTCATAGGTT-TTAT---------------------------------------TTAGCATTCGGTTTTTTTTTATATAAATTTTTTTT-TTTGAAT------------------------ACGGAGGTGTTTAGTCCGTAGGCGTATTTTCTAATACGAATCGGGCATGCC-CTTAGCGACGGCGCTTTGG-GTATCT-AGGAAGATTCACCT----ACCATGGTTCGAAG-GTA---------------TCAATGT-AT----CAAT----------------------------------ACAGATTAATTTAA---TTACAAAAC-ATTAAAAAA--------AACCTTTTTT--TTAGAATG-------TCGGACCA--------ACCCCCAAAAAAAT-TG-------AG-------------------------
droBip1 scf7180000391758:316-638 + GTAGCGATGCCTTACAAAGGGGGGTTAGTGTTAGTTCCATATTTACATTTTTCTTAGGGT-TT-----TTC--------------CCTTTGTTAGTTTTA-TTT------------------------TG----------ATTTTTT------------------------TCGGAGGTGTTTAGTCCGTAGGCATATTTTTAAATATTAATCGGGCATGTC-TCAAGCGACGGCGCTTAAG-GCATCTTTAGAAGATTCACTT----TCCATTGTCCGTTG-AAAAA-AAAAAGCGTATTTCATTAA-AATAAAA--------------------------------------CAAATAAACTTATAAAATGTACAAAAAATTATGTA--------TTCTTTTATTTTCTAG---------------ATCAAAGATGGAGCCTCAAAAAAAAATT--------TTAAAGATGGCGT-----------TTA
droKik1 scf7180000300973:5566-5821 + ATTGGAATTCCTCATAATAATATGATAGTTTTAATACCGTTTTTACATTATTATTAGGAT-TT-----------------------------------TG-TTT------------------------T-----------GTTTTAA------------------------TGGGGGGTGTTTAGTCCGTAGGCGTC--TTATAGGACGAATCGGGCATATA-TAGAGCGAAATCGTTCTAT-ATATCTTTAGAAGACTCACCT----ACCC-GGTTTAAAA-ACAAA-AAAAAAAA-------------------AAT--------------TGGCCCTAGGTAGG-TTTTTACTTATCATTCTTT---ATAAT-----------------------------------TAGAATT-------------------------------------------A-----------ATTCATTTTTTAAATTT--
droFic1 scf7180000450015:1562-1849 - GTAGTTATGCCTTTCAAACAGGAAGCAGTTTTAGTTCCGTGCTTGCACTTTTCTTAGGGA-TT----------------------------------------T------------------------T-----------TAGGATT------------------------TTGGAGGTGTTTAGTCCGTAGGCGTAATT-TAATTACGAATCGGGCATATT-TAAAGCGACGGCGCTTTAA-ATATCTTTTGAAGATTCACCT----TCCATGGTTCGAA--ACCAA-AAAAAAAA------------------AAATTAG--GAAG----------------------------TTTCAA----T---TTATAAAACAATGATTTTAATTATGTTCTTTTTCTTTACTTAGAATG-------TC-----------GCAGCCACCAATAAAAATTC-------GGCGGATTGACTT-----------T--
droEle1 scf7180000488055:51923-52211 + GTATCGATGCCATATAGGGGCGAATTAGTGTTAGTATCGTTTT-TCATTTTTCGTAGGGA-CTATATTCTC--------------CCTTTGTTCATTTTA-TTT------------------------CGA---------ATTTTTT------------------------TCGGAGGTGTTTAGTCCGTTGGAGTATTTTCCAATACGAATCGGGCATACC-TTAAACGACGGCGTTTTAG-GTATCTTTAGAAGATTCAACT----GTCATGTTTCAATG-ACCAA-AAAAAACCTATTTTATTGAGATTAAAGAAAACAAGAAAG-GAAGCAAACTTAGGCAAGCCGAAGCCCTTG-----------------------------------------------------------------------------------------------------------------CGTCATTTTTAAA------
droRho1 scf7180000780026:3049-3299 + GTAGCAATACCATATAAAAATAATGTTGTATTGGTACCGTTTTTACATTTTTCATAGTTT-AT---------------------------------T------TTT------------------------T----ATTTTTTGAGAA------------------------TGGGGGGTGTTTAGTCCGTAGGCAT--TTAAAAAAATGAATCAGGCATATT-TAAAGCGACGGCGCTTTAA-ATATCTTTAGAAGATTCACCT----ACCCTGGTTCGAAA-ACCTA-AAAAAAAA------------------CACT----------------------------------ACTTTTTATTTATT---TTATAAAATATTTATTAAA--------ATTATTTGTT--ATAGTATG-------G------------------------------------------------------------------
droBia1 scf7180000302129:77419-77605 + GTTGGAATTACTTTAAAAAATAATGTAGCGCTGATACCAATGTAGCACTTCTCCTAGGTC-TTAC---------------------------------------TT------------------------T-TTTTTCC-GTTGAAG------------------------TGGGAGGAGTTTAGTCCGTAGGTGTT--ACAAAAAACAAATTGGACATATA-G-CTGTGACGGCGCTTTG------------TGAATTCACCT----ACACC--TCCAAAA-ACCAA-AAAAGAAA------------------AAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000411800:355-533 + GAAGCCATTCCTTATTTGGAAAAAATAGTGGTAGTCCCTTGTTGGCATTTTGATTGAC--------------------------------------------------------------------------------------ATT------------------------AAGAAGGTGTTTAGTCCGTAGGCGTAATTATCATTATGAATCGGGCATATT-TACTGCGACGACGCTTTAA-ACATCTTTTGAAGATTCACCT----ACCTTGGTTCGAGC-ACGAA-AAAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:420114-420255 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAGGTGTTTAGCCCGTAGGCGTATTTCTCAATATGAATCGGGCATACC-TTAAACAACGGCGTTTTAG-GTATCTTTAAAAGATTCACCT----GGATCGGTTTCGTG-ACCGAAAAATAGAGTATTTTATTGA-ATTAAAAAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:369420-369608 + GTAGCAATGCCATA--AAGGCTAAATAGTGTTAGTTCCTTATATACATTTTTCGTAGGAT-CCACAATCTC--------------CCATAGTTTATTTTA-TTT------------------------T-----------ATTATTT------------------------TTGGAGGTGTTTAGCCCGTAGGCGTATTTTTCAATATGAATC-------------------GGCGTTTTAT-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAATG-ACCGA-AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_6:525546-525721 + GGAG---------------GCTAAATAGTGTTATTTCCTTATATACATTTTTCGTAGGAT-CCACAATCTC--------------CCATAGTTTATTTTA-TTT------------------------T-----------ATTATTT------------------------TTGGAGGTGTTTAGCCCGTACGCGTATTTTTTAATATGAATC-------------------GGCGTTTTAT-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAATG-ACCGA-AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_2999:3500-3715 - GTAGCGATGCCATATAAGAGCGAAATAGTGCTAGTTCCATATATACATTTTTCGTAGGGT-TTACATTCTC--------------CCTTTGTTAATTTTA-TTT------------------------AAA---------TTTTACT------------------------TTGGAGGTGTTTAGTCCGTAGGCGTATTTTTCAATATGAATCGGGCATACC-TTAAACGACGGCGTTTAAG-GTATCTTTAGAAGATTCACCT----GCCTCGGTTCGATG-ACCGA-AAAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:21346590-21346627 - TTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---TTAAAAAAGAAATAGTAAA--------AGCTTTTACT--TTA-------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GTAGCCATGCCGTACAAGGGCGGTTTAGTTGTTGTTCCCTTGCTGCATGTGT---AGGTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGGTGTTTAGTCCGTAGGCAT------TAGTATGAATCGGGCATATT-TATTGCGACGGCGCATTAG-ATATCTTTTGAAGATTCACCT----ACCATGGTTCGATAAACCAA-AAAAAAAA------------------AAAAAAA--AAAG-----GGGAGAGGGGGGGGGGGGGGTCTTTTCTTCTTTT---TTAAACAAAAACTAATAAA--------TTCTTTTACT--TTAGAATG-------GCCGACCAACAA--CAACCACCAAAAAAAC-TC-------AGCCGTATGTCTT-----------TTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CAACCACCAAAAAAAC-TC-------AGCCGTA....................2712.00200020
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGCATA...............................................................................................................................................................................................................................................................................2371.7112011010
.........................................................GTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGG............................................................................................................................................................................................................................................................................................................................2271.14808000
.........................................................GTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGG.........................................................................................................................................................................................................................................................................................................................2571.00706010
................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACT--TTAGAATG-------GCCGACCAACA........................................................2621.00202000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACT--TTAGAATG-------GCCGACCAACAA--C....................................................2821.00202000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACT--TTAGAATG-------GCCGACCA...........................................................2380.75606000
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGCATATT-............................................................................................................................................................................................................................................................................2570.71514000
......................................................................................................................................................................................................................GGCATATT-TATTGCGACGGCGCAT............................................................................................................................................................................................................................................................2470.71505000
......................................................................................................................................................................................................................GGCATATT-TATTGCGACGGCGCA.............................................................................................................................................................................................................................................................2370.71505000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACT--TTAGAATG-------GCCGACCAA..........................................................2430.67202000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACT--TTAGAATG-------GCCGACC............................................................2280.63505000
..........................................................TAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAG..........................................................................................................................................................................................................................................................................................................................2370.57404000
.........................................................GTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGA...........................................................................................................................................................................................................................................................................................................................2370.57404000
..........................................................TAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGG.........................................................................................................................................................................................................................................................................................................................2470.57404000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTACT--TTAGAATG-------GCCGACCAAC.........................................................2320.50101000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACT--TTAGAATG-------GCCGACCAACAA--.....................................................2720.50101000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTACT--TTAGAATG-------GCCGACCAAC.........................................................2420.50101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------GCCGACCAACAA--CAAT.................................................2420.50101000
....................................................................................................................................................................................................................................................TATCTTTTGAAGATTCACCT----ACC............................................................................................................................................................................................................................2340.50202000
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGCATAT..............................................................................................................................................................................................................................................................................2470.43303000
..................................................................................................................................................................................................AT------TAGTATGAATCGGGCATATT-............................................................................................................................................................................................................................................................................2270.43303000
.......................................................................................................................................................................................................................................CGGCGCATTAG-ATATCTTTTGAAGATT........................................................................................................................................................................................................................................2770.43302010
............................................................................................................................................................................................GTAGGCAT------TAGTATGAATCGGG...................................................................................................................................................................................................................................................................................2280.38303000
.......................................................................................................................................................................................................................................CGGCGCATTAG-ATATCTTTTGAAGATTC.......................................................................................................................................................................................................................................2870.29202000
.......................................................................................................................................................................................................................................CGGCGCATTAG-ATATCTTTTGA.............................................................................................................................................................................................................................................2270.29202000
.......................................................................................................................................................................................................................................CGGCGCATTAG-ATATCTTTTGAAGAT.........................................................................................................................................................................................................................................2670.29201010
.........................................................GTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAG..........................................................................................................................................................................................................................................................................................................................2470.29201100
..................................TTCCCTTGCTGCATGTGT---AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25101000
...................................................................................................................................................................................................T------TAGTATGAATCGGGCATATT-TATTG.......................................................................................................................................................................................................................................................................2680.25202000
.........................................................................................................................................................................................TCCGTAGGCAT------TAGTATGAATCG.....................................................................................................................................................................................................................................................................................2380.25211000
...............................................TGTGT---AGGTAGTT-----------------------------------CG-AAA------------------------T------------GGGG..........................................................................................................................................................................................................................................................................................................................................................2340.25101000
...........................................................................................................................................................................................................................................................TGAAGATTCACCT----ACCATGGTTCG....................................................................................................................................................................................................................2480.25202000
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGCA.................................................................................................................................................................................................................................................................................2180.25202000
..................................................................................................................................................................................................AT------TAGTATGAATCGGGCATATT-TA..........................................................................................................................................................................................................................................................................2450.20101000
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGCATATT-TA..........................................................................................................................................................................................................................................................................2750.20101000
....................................................................................................................................................................................................................................CGACGGCGCATTAG-ATATCTTTTG..............................................................................................................................................................................................................................................2460.17101000
..........................................................TAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGGTG.......................................................................................................................................................................................................................................................................................................................2660.17101000
....................................................................................................................................................................................................................................CGACGGCGCATTAG-ATATCTTTTGAAGA..........................................................................................................................................................................................................................................2860.17101000
.........................................................GTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGGT........................................................................................................................................................................................................................................................................................................................2670.14100010
.........................................................GTAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAA..........................................................................................................................................................................................................................................................................................................................2470.14101000
..........................................................TAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGA...........................................................................................................................................................................................................................................................................................................................2270.14101000
................................................................................................................................................................................................GCAT------TAGTATGAATCGGGCATA...............................................................................................................................................................................................................................................................................2270.14101000
..........................................................TAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGG............................................................................................................................................................................................................................................................................................................................2170.14100010
..........................................................TAGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGGT........................................................................................................................................................................................................................................................................................................................2570.14100010
.......................................................................................................................................................................................................................................CGGCGCATTAG-ATATCTTTTGAAGA..........................................................................................................................................................................................................................................2570.14101000
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGCAT................................................................................................................................................................................................................................................................................2270.14101000
.....................................................................................................................................................................................TTAGTCCGTAGGCAT------TAGTATGAA........................................................................................................................................................................................................................................................................................2480.13101000
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGA...................................................................................................................................................................................................................2480.13101000
.....................................................................................................................................................................................................................GGGCATATT-TATTGCGAC...................................................................................................................................................................................................................................................................1880.13101000
.............................................................TT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGGTGT......................................................................................................................................................................................................................................................................................................................2480.13100100
.............................................................................................................................................................................................................................................ATTAG-ATATCTTTTGAAGATT........................................................................................................................................................................................................................................2180.13100010
.....................................................................................................................................................................................TTAGTCCGTAGGCAT------TAGTATG..........................................................................................................................................................................................................................................................................................2280.13101000
......................................................................................................................................................................................TAGTCCGTAGGCAT------TAGTATGAATTA.....................................................................................................................................................................................................................................................................................2680.13100010
..................................................................................................................................................................................TGTTTAGTCCGTAGGCAT------TAGTATGAA........................................................................................................................................................................................................................................................................................2780.13100010
...............................................................................................................................................................................................GGCAT------TAGTATGAATCGGGC..................................................................................................................................................................................................................................................................................2080.13101000
...........................................................................................................................................................................................................................................................TGAAGATTCACCT----ACCATGGTTCGA...................................................................................................................................................................................................................2580.13101000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTACT--TTAGAATG-------GCCGACC............................................................2480.13110000
.............................................................................................................................................................................................TAGGCAT------TAGTATGAATCGGGCA.................................................................................................................................................................................................................................................................................2380.13101000
...........................................................................................................................................................................................................................................GCATTAG-ATATCTTTTGAAGATT........................................................................................................................................................................................................................................2380.13100010
...........................................................................................................................................................................................................................................................TGAAGATTCACCT----ACCATGGTTC.....................................................................................................................................................................................................................2380.13100010
................................................................................................................................T------------GGGGAA------------------------ATGGAGGTGTTTAG..................................................................................................................................................................................................................................................................................................................2190.11101000
...........................................................................................................................................................................................................................................................TGAAGATTCACCT----ACCATGGTT......................................................................................................................................................................................................................2290.11101000
.......................................................................................................................................................................................................................................................CTTTTGAAGATTCACCT----ACCATGG........................................................................................................................................................................................................................2490.11101000
...........................................................AGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGAGG.........................................................................................................................................................................................................................................................................................................................2390.11101000
......................................................................................................AA------------------------T------------GGGGAA------------------------ATGGAGGTGTTTAGTCT...............................................................................................................................................................................................................................................................................................................2690.11100100
...................................................................................................................................................................................................................................................................................................................................................................................................AA--------TTCTTTTACT--TTAGAATG-------GCCG...............................................................2490.11101000
.......................................................................................................................................................................................................................GCATATT-TATTGCGACGGCGCATT...........................................................................................................................................................................................................................................................2490.11101000
...........................................................AGTT-----------------------------------CG-AAA------------------------T------------GGGGAA------------------------ATGGA...........................................................................................................................................................................................................................................................................................................................2190.11100010
...................................................................................................................................................................................................T------TAGTATGAATCGGGCATATT-TATT........................................................................................................................................................................................................................................................................25100.10101000
........................................................................................................................................................................................................................................................TTTTGAAGATTCACCT----ACCATG.........................................................................................................................................................................................................................22100.10101000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACT--TTAGAATG-------GCCGACCA...........................................................20100.10100010
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCAT------T................................................................................................................................................................................................................................................................................................23110.09101000
.....................................................................................................AAA------------------------T------------GGGGAA------------------------ATGGAGGTGTTTA...................................................................................................................................................................................................................................................................................................................23110.09101000
.....................................................................................................AAA------------------------T------------GGGGAA------------------------ATGGAGGTGTT.....................................................................................................................................................................................................................................................................................................................21110.09101000
..............................................................................................................................................GGGAA------------------------ATGGAGGTGTTTAG..................................................................................................................................................................................................................................................................................................................19120.08101000
..................................................................................................................................................A------------------------ATGGAGGTGTTTAGTCCGTAG...........................................................................................................................................................................................................................................................................................................22180.06101000
............................................................................................................................................................................TGGAGGTGTTTAGTCCGTAGG..........................................................................................................................................................................................................................................................................................................21190.05100010
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCA........................................................................................................................................................................................................................................................................................................21200.05100010
dp5
GTAGGTTTACCTTATGAGGGAAATATTTTAGTCATTCCATTGCTTCA----TCATTGTAT-TTAAAATGTATAATATATTCATTACCT----AAAATTAG-TAC------------------------A-----------GATTTTA------------------------CTGGGGGTGTTTAGTCCGTAGGCGTGTTTTTCAACATGAATCGGGCATGCCCTTTAGCGACGGCGTTAAAGAGTATCTTAAGAAGATTCACCTATATACCATGGTCCGCAAAACCAA-AAAAAAAA------------------AAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................TCGGGCATGCCCTTTAGCGACGGC................................................................................................................................................................................................................................................................2418.0080000000260
..................................................................................................................................................................................................GTGTTTTTCAACATGAATCGGGC..................................................................................................................................................................................................................................................................................2344.501801800000000
...................................................................................................................................................................................................................TCGGGCATGCCCTTTAGCGACGGCGT..............................................................................................................................................................................................................................................................2613.0030000000030
............................................................................TATTCATTACCT----AAAATTAG-TAC------------------------A-----------GA.............................................................................................................................................................................................................................................................................................................................................................2613.0030000000300
..................................................................................................................................................................................................GTGTTTTTCAACATGAATCGGG...................................................................................................................................................................................................................................................................................2251.8090900000000
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACATGAATCGGGC..................................................................................................................................................................................................................................................................................2841.7570700000000
.TAGGTTTACCTTATGAGGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................TAAGAAGATTCACCTATATACCATGG........................................................................................................................................................................................................................2611.0010000000010
...................................................................................................................................................................................................TGTTTTTCAACATGAATCGGGCAT................................................................................................................................................................................................................................................................................2411.0010000000010
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACATGAAT.......................................................................................................................................................................................................................................................................................2350.8040100000300
.................................................................................................................................................................................................CGTGTTTTTCAACATGAATCGGGC..................................................................................................................................................................................................................................................................................2440.7530300000000
..................................................................................................................................................................................................GTGTTTTTCAACATGAATCGGGCA.................................................................................................................................................................................................................................................................................2440.7530300000000
......................................................................................................................................................................................TAGTCCGTAGGCGTGTTTTTCAAC.............................................................................................................................................................................................................................................................................................2450.6030300000000
..................................................................................................................................................................................TGTTTAGTCCGTAGGCGTGTTTT..................................................................................................................................................................................................................................................................................................2370.5740000000400
...................................................................................................................................................................................................TGTTTTTCAACATGAATCGGGC..................................................................................................................................................................................................................................................................................2240.5020200000000
.....................................................................................................................................................................................................TTTTTCAACATGAATCGGGCA.................................................................................................................................................................................................................................................................................2140.5020200000000
................................................................................................................................................TTA------------------------CTGGGGGTGTTTAGTCCG..............................................................................................................................................................................................................................................................................................................2160.5030200001000
...........................................................................................................................................................................CTGGGGGTGTTTAGTCCG..............................................................................................................................................................................................................................................................................................................1860.5030300000000
..............................................................................................................................................................................GGGGTGTTTAGTCCGTAGGCGTG......................................................................................................................................................................................................................................................................................................2370.4330300000000
.....................................................................................................................................................................................TTAGTCCGTAGGCGTGTTTTTCAA..............................................................................................................................................................................................................................................................................................2450.4020000000200
......................................................................................................................................................................................TAGTCCGTAGGCGTGTTTTTCAACA............................................................................................................................................................................................................................................................................................2550.4020200000000
.....................................................................................................................................................................................TTAGTCCGTAGGCGTGTTTTTCAAC.............................................................................................................................................................................................................................................................................................2550.4020200000000
......................................................................................................................................................................................TAGTCCGTAGGCGTGTTTTTCAA..............................................................................................................................................................................................................................................................................................2350.4020200000000
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACATGAATCGG....................................................................................................................................................................................................................................................................................2650.4020100000010
........................................TGCTTCA----TCATTGTAT-TTAAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2360.3320200000000
...........................TTAGTCATTCCATTGCTTCA----TCATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.3320200000000
.....................................................................................................................................................................................TTAGTCCGTAGGCGTGTTTTT.................................................................................................................................................................................................................................................................................................2170.2920100000100
...................................................................................................................................................................................................TGTTTTTCAACATGAATCGGGCA.................................................................................................................................................................................................................................................................................2340.2510100000000
....................................................................................................................................................................................................GTTTTTCAACATGAATCGGGCG.................................................................................................................................................................................................................................................................................2240.2510100000000
.....................................................................................................................................................................................TTAGTCCGTAGGCGTGTTTTTCAACA............................................................................................................................................................................................................................................................................................2650.2010000100000
......................................................................................................................................................................................TAGTCCGTAGGCGTGTTTTTCA...............................................................................................................................................................................................................................................................................................2250.2010100000000
.......................................................................................................................................................................................AGTCCGTAGGCGTGTTTTTCAACA............................................................................................................................................................................................................................................................................................2450.2010100000000
..................................................................................................................................................................................................GTGTTTTTCAACATGAATCGG....................................................................................................................................................................................................................................................................................2150.2010100000000
......................................................................................................................................................................................TAGTCCGTAGGCGTGTTTTTC................................................................................................................................................................................................................................................................................................2150.2010100000000
.....................................................................................................................................................................................TTAGTCCGTAGGCGTGTTTTTC................................................................................................................................................................................................................................................................................................2250.2010100000000
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACATGAATCG.....................................................................................................................................................................................................................................................................................2550.2010100000000
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACATGAATA......................................................................................................................................................................................................................................................................................2450.2010100000000
...........................................................................................................................................................................................CGTAGGCGTGTTTTTCAACATGAAA.......................................................................................................................................................................................................................................................................................2550.2010100000000
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACAA...........................................................................................................................................................................................................................................................................................1950.2010100000000
.....................................................................................................................................................................................TTAGTCCGTAGGCGTGTTTTTCAACAA...........................................................................................................................................................................................................................................................................................2750.2010100000000
.............................................................................................................................................................................................TAGGCGTGTTTTTCAACATGA.........................................................................................................................................................................................................................................................................................2150.2010000100000
.................................................................................................................................................TA------------------------CTGGGGGTGTTTAGTCCGTAGG..........................................................................................................................................................................................................................................................................................................2460.1710010000000
.................................................................................................................................................TA------------------------CTGGGGGTGTTTAGTCCGTAGGC.........................................................................................................................................................................................................................................................................................................2560.1710100000000
............................TAGTCATTCCATTGCTTCA----TCATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
...........................TTAGTCATTCCATTGCTTCA----........................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710100000000
....................................CCATTGCTTCA----TCATTGTAT-TTAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
.................................................................................................................................................TA------------------------CTGGGGGTGTTTAGTCAA..............................................................................................................................................................................................................................................................................................................2060.1710100000000
........................................TGCTTCA----TCATTGTAT-TTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710100000000
................................................................................................................................................TTA------------------------CTGGGGGTGTTTAGTCCGTAG...........................................................................................................................................................................................................................................................................................................2460.1710100000000
................................................................................................................................................TTA------------------------CTGGGGGTGTTTAGTCC...............................................................................................................................................................................................................................................................................................................2060.1710000100000
.................................................................................................................................................TA------------------------CTGGGGGTGTTTAGTCCGTAGGCG........................................................................................................................................................................................................................................................................................................2660.1710100000000
.......................................TTGCTTCA----TCATTGTAT-TTAAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
................................................................................................................................................TTA------------------------CTGGGGGTGTTTAGTCCGTA............................................................................................................................................................................................................................................................................................................2360.1710100000000
..............................GTCATTCCATTGCTTCA----TCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710100000000
..............................................................................................................................................................................GGGGTGTTTAGTCCGTAGGC.........................................................................................................................................................................................................................................................................................................2070.1410100000000
..AGGTTTACCTTATGAGGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
................................................................................................................................................................................GGTGTTTAGTCCGTAGGCG........................................................................................................................................................................................................................................................................................................1970.1410100000000
.................................................................................................................................................................................GTGTTTAGTCCGTAGGCGTG......................................................................................................................................................................................................................................................................................................2070.1410100000000
................................................................................................................................................................................GGTGTTTAGTCCGTAGGCGT.......................................................................................................................................................................................................................................................................................................2070.1410000100000
..............................................................................................................................................................................GGGGTGTTTAGTCCGTAGGCA........................................................................................................................................................................................................................................................................................................2170.1410000100000
.............................................................................................................................................................................................................CATGAATCGGGCATGCCCTT..........................................................................................................................................................................................................................................................................20100.1010100000000
..........................................................................................................................................................................................................................................................................................AACCAA-AAAAAAAA------------------AAAAAA..........................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................AAACCAA-AAAAAAAA------------------AAAAA...........................................................................................................................................................................20200.0510100000000
droPer2
GTTGCCCTGCCATATAAAGGAGAACTAGTTTTAGTTCCGTTGTTGCATTTTCTATAGGTT--TATTTGCTA--------------CCTTTACTTATTTTCATTT---------G--------------T-----------AGTATTTTTTGCTTATTTTTAAATTCATAAAATGGAGGTGTTTAGTCCGTAGGCGTAATT-GAATTACGAATCGGGCATATC-TTTAGCGCCTGCGCTAAAG-ATATCTTTGGAAGATTCACCG----GCCAGAGTCCGACAGACCAA-AACAAAAA------------------AAAAAAA--GTAGT----TTGCA--AGAGACG-AATTTTCTTTA--------------------------------------------TATTT-TTAGTATGGAAAATACA-----------ACATTCAACAACAACAATCAAACAATTCGCCGTTTAATCT-----------TTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTA......................................................................................................................................................................................................................................................................................................2372.43170200015
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTAA.....................................................................................................................................................................................................................................................................................................2471.57110000011
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGG..........................................................................................................................................................................................................................................................................................................1981.008011006
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCG........................................................................................................................................................................................................................................................................................................2170.866040002
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGC.........................................................................................................................................................................................................................................................................................................2070.574021001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAAACAATTCGCCGTTTAATC...............2520.501010000
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTAAT....................................................................................................................................................................................................................................................................................................2570.433000003
......................................................................................CTTTACTTATTTTCATTT---------G--------------T-----------AG.............................................................................................................................................................................................................................................................................................................................................................22100.404040000
...........................................................................................................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCCGAC..................................................................................................................................................................................................................2680.383030000
...........................................................................................................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCC.....................................................................................................................................................................................................................2380.383030000
.......TGCCATATAAAGGAGAACTAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.303020001
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTAAA....................................................................................................................................................................................................................................................................................................2570.292000002
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTAATT-G.................................................................................................................................................................................................................................................................................................2770.292010001
...........................................................................................................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTC......................................................................................................................................................................................................................2280.252020000
...........................................................................................................................................................................................................................................................GGAAGATTCACCG----GCCAGAGT.......................................................................................................................................................................................................................2180.252020000
...........................................................................................................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCCGA...................................................................................................................................................................................................................2580.252010001
.............................................................................................................................................................................................................TACGAATCGGGCATATC-TTTAGCGCC...................................................................................................................................................................................................................................................................2690.222110000
...............................................................................................................................................................................................................................................................................................................................AAA--GTAGT----TTGCA--AGAGACG-A..............................................................................................................................................2150.201001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TACA-----------ACATTCAACAACAACAATCAAACAA.............................2950.201010000
.........................................................................................................................................................................................................................ATATC-TTTAGCGCCTGCGCTA............................................................................................................................................................................................................................................................2150.201010000
.......TGCCATATAAAGGAGAACTAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.202020000
...............................................................................................................................................................................................................................................AAG-ATATCTTTGGAAGATTC.......................................................................................................................................................................................................................................20100.202200000
.......TGCCATATAAAGGAGAACTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.202020000
....................................................................................................................................................................TCATAAAATGGAGGTGTTTAGTCCGT.............................................................................................................................................................................................................................................................................................................2660.171010000
........................................................................................................................................................................................................................................................................................................................................T----TTGCA--AGAGACG-AATTTTCT.......................................................................................................................................2160.171010000
..............................................................................................................................................................................................................................................................................................................................AAAA--GTAGT----TTGCA--AGAGAC.................................................................................................................................................2060.171000001
.............................................................................................................................................................................................................TACGAATCGGGCATATC-TTTAGCGCCT..................................................................................................................................................................................................................................................................2760.171010000
...................................................................................................................................................................................................................TCGGGCATATC-TTTAGCGCCT..................................................................................................................................................................................................................................................................2160.171100000
....................................................................................................................................................................................................................CGGGCATATC-TTTAGCGCCTG.................................................................................................................................................................................................................................................................2160.171010000
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGT.......................................................................................................................................................................................................................................................................................................2270.141000001
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTAATT-..................................................................................................................................................................................................................................................................................................2670.141000001
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCC........................................................................................................................................................................................................................................................................................................2170.141000001
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGA.......................................................................................................................................................................................................................................................................................................2270.141000001
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTAATC-..................................................................................................................................................................................................................................................................................................2670.141000001
...............................................................................................................................................................................AGGTGTTTAGTCCGTAGGCGT.......................................................................................................................................................................................................................................................................................................2170.141010000
...............................................................................................................................................................................AGGTGTTTAGTCCGTAGGC.........................................................................................................................................................................................................................................................................................................1970.141010000
.................................................................................................................................................................................GTGTTTAGTCCGTAGGCGTAA.....................................................................................................................................................................................................................................................................................................2180.131001000
...........................................................................................................................................................................................................ATTACGAATCGGGCATATC-TT..........................................................................................................................................................................................................................................................................2180.131010000
............................................................................................................................................................................................................TTACGAATCGGGCATATC-TTTAGC......................................................................................................................................................................................................................................................................2480.131100000
..................................................................................................................................................................................TGTTTAGTCCGTAGGCGTAATT-GAA...............................................................................................................................................................................................................................................................................................2580.131010000
..............................................................................................................................................................................................................................................................AGATTCACCG----GCCAGAGTCC.....................................................................................................................................................................................................................2080.131010000
............................................................................................................................................................................................................................................................GAAGATTCACCG----GCCAGAG........................................................................................................................................................................................................................1980.131010000
..............................TTAGTTCCGTTGTTGCATTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
.................................................................................................................................................................................................................................................................TTCACCG----GCCAGAGTCCGAC..................................................................................................................................................................................................................2080.131010000
......................................................................................................................................................................................TAGTCCGTAGGCGTAATT-G.................................................................................................................................................................................................................................................................................................1980.131010000
........................CTAGTTTTAGTTCCGTTGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
.......................................................................................................................................................................................................T-GAATTACGAATCGGGCATATC-TT..........................................................................................................................................................................................................................................................................2480.131010000
................................................................................................................................................................................................................................................................ATTCACCG----GCCAGAGTCCGAC..................................................................................................................................................................................................................2180.131010000
...........................................................................................................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCCG....................................................................................................................................................................................................................2480.131010000
............................................................................................................................................................................TGGAGGTGTTTAGTCCGTAGG..........................................................................................................................................................................................................................................................................................................2180.131010000
...........................................................T--TATTTGCTA--------------CCTTTACTTA............................................................................................................................................................................................................................................................................................................................................................................................................2080.131010000
.......................................................................................................................................................................TAAAATGGAGGTGTTTAGT.................................................................................................................................................................................................................................................................................................................1990.111001000
......................................................................................................................................................................................................................................................TCTTTGGAAGATTCACCG----GC.............................................................................................................................................................................................................................2090.111010000
...................................................................................................................................................................................................................TCGGGCATATC-TTTAGCGCC...................................................................................................................................................................................................................................................................2090.111100000
....................................................................................................................................................................................................AATT-GAATTACGAATCGGGCA.................................................................................................................................................................................................................................................................................2190.111010000
.................................................................................................................................................................................................................AATCGGGCATATC-TTTAGCG.....................................................................................................................................................................................................................................................................2090.111010000
....................................................................................................................................................................................................AATT-GAATTACGAATCGGGC..................................................................................................................................................................................................................................................................................2090.111010000
...................................................................................................................................................................................................................TCGGGCATATC-TTTAGCGCCC..................................................................................................................................................................................................................................................................2190.111100000
...........ATATAAAGGAGAACTAGTTTTAGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
...................................................................................................................................................................................................TAATT-GAATTACGAATCGGGC..................................................................................................................................................................................................................................................................................2190.111010000
.................................................................................................................................................................................................................AATCGGGCATATC-TTTAGCGC....................................................................................................................................................................................................................................................................2190.111100000
......CTGCCATATAAAGGAGAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111010000
.......................................................................................................................................................................................................................................................CTTTGGAAGATTCACCG----GCCA...........................................................................................................................................................................................................................2190.111010000
........................................................................................................................................................................AAAATGGAGGTGTTTAGTCCG..............................................................................................................................................................................................................................................................................................................2190.111010000
...................................................................................................................................................................................................................................................ATATCTTTGGAAGATTCACCG----GCC............................................................................................................................................................................................................................2490.111010000
.............................................................................................................................................................................................................TACGAATCGGGCATATC-TTTAGCGC....................................................................................................................................................................................................................................................................2590.111010000
......................................................................................................................................................................................................TT-GAATTACGAATCGGGCATA...............................................................................................................................................................................................................................................................................2190.111010000
....................................................................................................................................................................................................................................................TATCTTTGGAAGATTCACCG----...............................................................................................................................................................................................................................20100.101010000
.......TGCCATATAAAGGAGAACTAGTTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.101010000
......................................................................................CTTTACTTATTTTCATTT---------G--------------T-----------AGT............................................................................................................................................................................................................................................................................................................................................................23100.101010000
..........CATATAAAGGAGAACTAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
.......TGCCATATAAAGGAGAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101010000
.................................................................................................TTCATTT---------G--------------T-----------AGTATTTTTTGC...................................................................................................................................................................................................................................................................................................................................................21100.101010000
........GCCATATAAAGGAGAACTAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.101010000
.......TGCCATATAAAGGAGAACTAGTTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.101001000
..............................................................................................ATTTTCATTT---------G--------------T-----------AGTATTTTT......................................................................................................................................................................................................................................................................................................................................................21100.101010000
droAna3
GTAGCGATGCCATGTAAGGGCGAATTGGTTCTAGCACCATATTTGCATTATTCATAGGTT-TTAT---------------------------------------TTAGCATTCGGTTTTTTTTTATATAAATTTTTTTT-TTTGAAT------------------------ACGGAGGTGTTTAGTCCGTAGGCGTATTTTCTAATACGAATCGGGCATGCC-CTTAGCGACGGCGCTTTGG-GTATCT-AGGAAGATTCACCT----ACCATGGTTCGAAG-GTA---------------TCAATGT-AT----CAAT----------------------------------ACAGATTAATTTAA---TTACAAAAC-ATTAAAAAA--------AACCTTTTTT--TTAGAATG-------TCGGACCA--------ACCCCCAAAAAAAT-TG-------AG-------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................TTCACCT----ACCATGGTTCGAAG-GTA---------------TCAA..........................................................................................................................................................................................2811.001100000
............TGTAAGGGCGAATTGGTTCTAGCACCATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATG-------TCGGACCA--------ACCCCCAAAA.........................................2550.804400000
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAAG-G...............................................................................................................................................................................................................2770.715410000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCCCAAA..........................................2550.603201000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCCC.............................................2250.603120000
..........................................................................................................................................................................................................TAATACGAATCGGGCATGCC-CTTAGCG.....................................................................................................................................................................................................................................................................2720.501100000
.................................................................................................................................................................................................................AATCGGGCATGCC-CTTAGCGACGG.................................................................................................................................................................................................................................................................2420.501010000
...............................................TTATTCATAGGTT-TTAT---------------------------------------TTAGCATTCGG........................................................................................................................................................................................................................................................................................................................................................................................2820.501100000
....................................................................................................................................................................................................................CGGGCATGCC-CTTAGCGACGG.................................................................................................................................................................................................................................................................2120.501100000
..........................................................................................................................................................................................................TAATACGAATCGGGCATGCC-CTTAGC......................................................................................................................................................................................................................................................................2620.501100000
...................................................................................................................................................................................................................TCGGGCATGCC-CTTAGCGACGGCGC..............................................................................................................................................................................................................................................................2520.501100000
................................................................................................................................................................................................................GAATCGGGCATGCC-CTTAGCGACGG.................................................................................................................................................................................................................................................................2520.501100000
......................................................................................................................................................................................TAGTCCGTAGGCGTATTTTCT................................................................................................................................................................................................................................................................................................2120.501010000
...................................................TCATAGGTT-TTAT---------------------------------------TTAGCATTCGGTT......................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
..................................................................................................................................................................................................................ATCGGGCATGCC-CTTAGCGAC...................................................................................................................................................................................................................................................................2120.501010000
......................................................................................................................................................................................................................................................TCT-AGGAAGATTCACCT----ACCATGGTTC.....................................................................................................................................................................................................................2780.504040000
..........................................................TT-TTAT---------------------------------------TTAGCATTCGGTT......................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATG-------TCGGACCA--------ACCCCCA............................................2250.402200000
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTATT....................................................................................................................................................................................................................................................................................................2550.402000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCCCAAAAA........................................2750.402200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATG-------TCGGACCA--------ACCCCCAAA..........................................2450.402200000
..................................................................................................................................................................................................GTATTTTCTAATACGAATCGGGC..................................................................................................................................................................................................................................................................................2350.402011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGAATG-------TCGGACCA--------ACCCCCAA...........................................2250.402200000
.................................................................................................................................................................................................................................TAGCGACGGCGCTTTGG-GTATCT-AGGAA............................................................................................................................................................................................................................................2840.251100000
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAAG-................................................................................................................................................................................................................2680.252200000
......................................................................................................................................................................................................TTTCTAATACGAATCGGGCATGCC-C...........................................................................................................................................................................................................................................................................2540.251010000
......................................................................................................................................................................................................TTTCTAATACGAATCGGGCATGCC-............................................................................................................................................................................................................................................................................2440.251010000
.................................................................................................................................................................................................................................TAGCGACGGCGCTTTGG-GTATCT-AG...............................................................................................................................................................................................................................................2540.251100000
...................................................................................................................................................................................................TATTTTCTAATACGAATCGGGCATG...............................................................................................................................................................................................................................................................................2540.251001000
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGGTTC.....................................................................................................................................................................................................................2280.252110000
.......................................................................................................................................................................................................TTCTAATACGAATCGGGCATGCC-C...........................................................................................................................................................................................................................................................................2440.251000010
.......................................................................................................................................................................................................TTCTAATACGAATCGGGCATGCC-CT..........................................................................................................................................................................................................................................................................2540.251100000
.........................................................................................................................................................................................................CTAATACGAATCGGGCATGCC-............................................................................................................................................................................................................................................................................2140.251010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCC..............................................2150.201010000
.......................................................................................................................................................................................................................................CGGCGCTTTGG-GTATCT-A................................................................................................................................................................................................................................................1850.201100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATG-------TCGGACCA--------ACCCCC.............................................2150.201100000
..............................................................................................................................................TGAAT------------------------ACGGAGGTGTTTAGTCCGTA............................................................................................................................................................................................................................................................................................................2550.201100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGAATG-------TCGGACCA--------ACCCCC.............................................2050.201100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCCCAA...........................................2450.201100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATG-------TCGGACCA--------ACCCCCAA...........................................2350.201001000
........................................................................................................................................................................................................................CATGCC-CTTAGCGACGGCGCTT............................................................................................................................................................................................................................................................2250.201100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCCCAAAAAAA......................................2950.201100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCC...............................................2050.201010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAATG-------TCGGACCA--------ACCCCCA............................................2350.201100000
...........................................................................................................................................................................................................................................GCTTTGG-GTATCT-AGGAAGATTCACC....................................................................................................................................................................................................................................2670.141010000
..............TAAGGGCGAATTGGTTCTAGCACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141010000
............................................................................................................................................................................................................................................CTTTGG-GTATCT-AGGAAGATT........................................................................................................................................................................................................................................2170.141010000
................AGGGCGAATTGGTTCTAGCACCATATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141010000
.......................................................................................................................................................................................................................................................CT-AGGAAGATTCACCT----ACCATGG........................................................................................................................................................................................................................2380.131010000
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAAG-C...............................................................................................................................................................................................................2780.131010000
......................................................................................................................................................................................................................................................TCT-AGGAAGATTCACCT----ACCATGG........................................................................................................................................................................................................................2480.131000010
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGA...................................................................................................................................................................................................................2480.131100000
............................................................................................................................................................................................................................................................GAAGATTCACCT----ACCATGG........................................................................................................................................................................................................................1980.131010000
...........................................................................................................................................................................................................................................................GGAAGATTCACCT----ACCATGGTTC.....................................................................................................................................................................................................................2380.131010000
....................................................................................................................................................................................................................................................TATCT-AGGAAGATTCACCT----ACCATGG........................................................................................................................................................................................................................2680.131100000
...........................................................................................................................................................................................................................................................GGAAGATTCACCT----ACCATGGTTCGAAG-................................................................................................................................................................................................................2780.131100000
...........................................................................................................................................................................................................................................................GGAAGATTCACCT----ACCATGGTTCGAA..................................................................................................................................................................................................................2680.131100000
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGT.......................................................................................................................................................................................................................................................................................................2290.111100000
..............................................................................................................................................................................GAGGTGTTTAGTCCGTAGGCGTA......................................................................................................................................................................................................................................................................................................2390.111010000
droBip1
GTAGCGATGCCTTACAAAGGGGGGTTAGTGTTAGTTCCATATTTACATTTTTCTTAGGGT-TT-----TTC--------------CCTTTGTTAGTTTTA-TTT------------------------TG----------ATTTTTT------------------------TCGGAGGTGTTTAGTCCGTAGGCATATTTTTAAATATTAATCGGGCATGTC-TCAAGCGACGGCGCTTAAG-GCATCTTTAGAAGATTCACTT----TCCATTGTCCGTTG-AAAAA-AAAAAGCGTATTTCATTAA-AATAAAA--------------------------------------CAAATAAACTTATAAAATGTACAAAAAATTATGTA--------TTCTTTTATTTTCTAG---------------ATCAAAGATGGAGCCTCAAAAAAAAATT--------TTAAAGATGGCGT-----------TTASizeHit CountTotal NormTotal
No Reads
droKik1
ATTGGAATTCCTCATAATAATATGATAGTTTTAATACCGTTTTTACATTATTATTAGGAT-TT-----------------------------------TG-TTT------------------------T-----------GTTTTAA------------------------TGGGGGGTGTTTAGTCCGTAGGCGTC--TTATAGGACGAATCGGGCATATA-TAGAGCGAAATCGTTCTAT-ATATCTTTAGAAGACTCACCT----ACCC-GGTTTAAAA-ACAAA-AAAAAAAA-------------------AAT--------------TGGCCCTAGGTAGG-TTTTTACTTATCATTCTTT---ATAAT-----------------------------------TAGAATT-------------------------------------------A-----------ATTCATTTTTTAAATTT--SizeHit CountTotal NormTotal
No Reads
droFic1
GTAGTTATGCCTTTCAAACAGGAAGCAGTTTTAGTTCCGTGCTTGCACTTTTCTTAGGGA-TT----------------------------------------T------------------------T-----------TAGGATT------------------------TTGGAGGTGTTTAGTCCGTAGGCGTAATT-TAATTACGAATCGGGCATATT-TAAAGCGACGGCGCTTTAA-ATATCTTTTGAAGATTCACCT----TCCATGGTTCGAA--ACCAA-AAAAAAAA------------------AAATTAG--GAAG----------------------------TTTCAA----T---TTATAAAACAATGATTTTAATTATGTTCTTTTTCTTTACTTAGAATG-------TC-----------GCAGCCACCAATAAAAATTC-------GGCGGATTGACTT-----------T--SizeHit CountTotal NormTotal
No Reads
droEle1
GTATCGATGCCATATAGGGGCGAATTAGTGTTAGTATCGTTTT-TCATTTTTCGTAGGGA-CTATATTCTC--------------CCTTTGTTCATTTTA-TTT------------------------CGA---------ATTTTTT------------------------TCGGAGGTGTTTAGTCCGTTGGAGTATTTTCCAATACGAATCGGGCATACC-TTAAACGACGGCGTTTTAG-GTATCTTTAGAAGATTCAACT----GTCATGTTTCAATG-ACCAA-AAAAAACCTATTTTATTGAGATTAAAGAAAACAAGAAAG-GAAGCAAACTTAGGCAAGCCGAAGCCCTTG-----------------------------------------------------------------------------------------------------------------CGTCATTTTTAAA------SizeHit CountTotal NormTotal
No Reads
droRho1
GTAGCAATACCATATAAAAATAATGTTGTATTGGTACCGTTTTTACATTTTTCATAGTTT-AT---------------------------------T------TTT------------------------T----ATTTTTTGAGAA------------------------TGGGGGGTGTTTAGTCCGTAGGCAT--TTAAAAAAATGAATCAGGCATATT-TAAAGCGACGGCGCTTTAA-ATATCTTTAGAAGATTCACCT----ACCCTGGTTCGAAA-ACCTA-AAAAAAAA------------------CACT----------------------------------ACTTTTTATTTATT---TTATAAAATATTTATTAAA--------ATTATTTGTT--ATAGTATG-------G------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GTTGGAATTACTTTAAAAAATAATGTAGCGCTGATACCAATGTAGCACTTCTCCTAGGTC-TTAC---------------------------------------TT------------------------T-TTTTTCC-GTTGAAG------------------------TGGGAGGAGTTTAGTCCGTAGGTGTT--ACAAAAAACAAATTGGACATATA-G-CTGTGACGGCGCTTTG------------TGAATTCACCT----ACACC--TCCAAAA-ACCAA-AAAAGAAA------------------AAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAAGCCATTCCTTATTTGGAAAAAATAGTGGTAGTCCCTTGTTGGCATTTTGATTGAC--------------------------------------------------------------------------------------ATT------------------------AAGAAGGTGTTTAGTCCGTAGGCGTAATTATCATTATGAATCGGGCATATT-TACTGCGACGACGCTTTAA-ACATCTTTTGAAGATTCACCT----ACCTTGGTTCGAGC-ACGAA-AAAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAGGTGTTTAGCCCGTAGGCGTATTTCTCAATATGAATCGGGCATACC-TTAAACAACGGCGTTTTAG-GTATCTTTAAAAGATTCACCT----GGATCGGTTTCGTG-ACCGAAAAATAGAGTATTTTATTGA-ATTAAAAAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................AGATTCACCT----GGATCGGTTTCGTG-................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTAGCAATGCCATA--AAGGCTAAATAGTGTTAGTTCCTTATATACATTTTTCGTAGGAT-CCACAATCTC--------------CCATAGTTTATTTTA-TTT------------------------T-----------ATTATTT------------------------TTGGAGGTGTTTAGCCCGTAGGCGTATTTTTCAATATGAATC-------------------GGCGTTTTAT-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAATG-ACCGA-AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................TGGAGGTGTTTAGCCCGTAGGCGTA......................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..AGCAATGCCATA--AAGGCTAAATAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.........................................................................................................................................................................................................................................................TTAGAAGATTC---T----GCCTCGGCTCAATG-................................................................................................................................................................................................................2611.00100000000000010000
......................................................................................................................................................................................................TTTTCAATATGAATC-------------------GGCGTTT............................................................................................................................................................................................................................................................2211.00100000000000010000
.........................................TATACATTTTTCGTAGGAT-CCACAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..................................TTCCTTATATACATTTTTCGTAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.........................................................................................................................................................................................................................................................TTAGAAGATTC---T----GCCTCGGCTCAATG-AC..............................................................................................................................................................................................................2811.00100000000000010000
...............................................................................................................................................ATTT------------------------TTGGAGGTGTTTAGCCCGTAGG..........................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................................................................................TTTTTCAATATGAATC-------------------GGCGTTTTA..........................................................................................................................................................................................................................................................2511.00100000000000010000
droSec2
GGAG---------------GCTAAATAGTGTTATTTCCTTATATACATTTTTCGTAGGAT-CCACAATCTC--------------CCATAGTTTATTTTA-TTT------------------------T-----------ATTATTT------------------------TTGGAGGTGTTTAGCCCGTACGCGTATTTTTTAATATGAATC-------------------GGCGTTTTAT-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAATG-ACCGA-AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GTAGCGATGCCATATAAGAGCGAAATAGTGCTAGTTCCATATATACATTTTTCGTAGGGT-TTACATTCTC--------------CCTTTGTTAATTTTA-TTT------------------------AAA---------TTTTACT------------------------TTGGAGGTGTTTAGTCCGTAGGCGTATTTTTCAATATGAATCGGGCATACC-TTAAACGACGGCGTTTAAG-GTATCTTTAGAAGATTCACCT----GCCTCGGTTCGATG-ACCGA-AAAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---TTAAAAAAGAAATAGTAAA--------AGCTTTTACT--TTA-------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 12:30 AM