ID:

dwi-mir-9a

 Coordinate:

scf2_1100000004540:842233-842310 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.5 -32.9 -32.9

Flybase annnotation

pre_miRNA [Dwil\mir-9a-RM]; utr5 [utr5_plus_8673]; miRNA [Dwil\miR-9a-RA]

No Repeatable elements found

Sense Strand Reads

ATCAATATGATGAACAATCGAAAATGTTGTGACCCTCGCATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCATCAGTCATGTGAACGAAAAAGAAAAGTAAAACCTAAAAACA

********************************************((((..(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).)))).))))..******************************************* 		Read size # Mismatch Hit Count Total Norm Total V118

embryo

 V119

head

 M020

head

 M045

female body

 V117

male body
...........................................................TCTTTGGTTATCTAGCTGTATG................................................................................................. 22 0 1 328196.00 328196 187464 90641 15105 18481 16505
...........................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 0 1 199658.00 199658 115019 18408 37268 24072 4891
...........................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 0 1 32524.00 32524 2970 3168 14051 10386 1949
..................................................................................................TAAAGCTAGCTTACCGAAGTTA.......................................................... 22 0 1 17216.00 17216 12693 3361 59 951 152
..................................................................................................TAAAGCTAGCTTACCGAAGTT........................................................... 21 0 1 8937.00 8937 4431 3779 28 407 292
...........................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................ 23 1 1 6003.00 6003 115 61 5794 27 6
.................................................................................................ATAAAGCTAGCTTACCGAAGTTA.......................................................... 23 0 1 4825.00 4825 4088 442 8 250 37
...........................................................TCTTTGGTTATCTAGCTGTA................................................................................................... 20 0 1 3627.00 3627 100 179 2650 572 126
...........................................................TCTTTGGTTATCTAGCTGTATGAA............................................................................................... 24 1 1 3518.00 3518 1487 443 987 522 79
.................................................................................................ATAAAGCTAGCTTACCGAAGTT........................................................... 22 0 1 2610.00 2610 1760 636 0 145 69
...........................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................ 23 1 1 2115.00 2115 147 169 1168 524 107
............................................................CTTTGGTTATCTAGCTGTATGA................................................................................................ 22 0 1 2100.00 2100 153 33 15 1892 7
............................................................CTTTGGTTATCTAGCTGTATG................................................................................................. 21 0 1 1676.00 1676 184 148 5 1330 9
...........................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................ 23 1 1 1346.00 1346 82 47 1206 6 5
..................................................................................................TAAAGCTAGCTTACCGAAGTTAA......................................................... 23 0 1 1333.00 1333 833 441 2 42 15
...........................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................. 25 2 1 893.00 893 251 140 420 67 15
...........................................................TCTTTGGTTATCTAGCTGT.................................................................................................... 19 0 1 757.00 757 58 52 426 193 28
............................................................CTTTGGTTATCTAGCTGTAT.................................................................................................. 20 0 1 752.00 752 0 3 0 749 0
...........................................................CCTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 587.00 587 207 356 5 7 12
...........................................................TCTTTGGTTATCTAGCTGTATT................................................................................................. 22 1 1 582.00 582 300 74 115 78 15
...........................................................TCTTTGGTTATCTAGCTGTATC................................................................................................. 22 1 1 580.00 580 106 166 242 56 10
...........................................................TCTTTGGTTATCTATCTGTATG................................................................................................. 22 1 1 567.00 567 387 112 36 26 6
...........................................................TATTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 566.00 566 299 259 0 2 6
...........................................................TCTTTGGTTATCTAGCTGTATGAT............................................................................................... 24 1 1 564.00 564 112 73 250 118 11
...........................................................TCTTTGGTTATATAGCTGTATG................................................................................................. 22 1 1 543.00 543 175 315 1 47 5
.............................................................TTTGGTTATCTAGCTGTATG................................................................................................. 20 0 1 527.00 527 243 160 5 92 27
...........................................................TCTTTGGTTATCTAGATGTATG................................................................................................. 22 1 1 507.00 507 269 231 2 2 3
...........................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................. 21 1 1 502.00 502 0 3 495 4 0
...........................................................TCTTTGGTTATCTAGCTATG................................................................................................... 20 2 1 493.00 493 270 190 1 13 19
...........................................................TCTTTGGTTATCTAGCTGTATA................................................................................................. 22 1 1 443.00 443 143 184 53 44 19
...........................................................TCCTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 427.00 427 234 152 7 11 23
...........................................................TCTTTGGCTATCTAGCTGTATG................................................................................................. 22 1 1 412.00 412 218 145 14 10 25
...........................................................TCTTTTGTTATCTAGCTGTATG................................................................................................. 22 1 1 396.00 396 278 77 29 6 6
...........................................................TCTTTGGTTATCTATCTGTATGA................................................................................................ 23 1 1 368.00 368 236 22 91 17 2
...........................................................TCTTTGGTTATCTAGCCGTATG................................................................................................. 22 1 1 352.00 352 187 131 11 5 18
.............................................................TTTGGTTATCTAGCTGTATGA................................................................................................ 21 0 1 351.00 351 173 32 14 126 6
............................................................TCTTGGTTATCTAGCTGTATG................................................................................................. 21 2 1 347.00 347 185 129 6 3 24
...........................................................TCTTTGTTTATCTAGCTGTATG................................................................................................. 22 1 1 332.00 332 179 77 52 10 14
.................................................................................................ATAAAGCTAGCTTACCGAAGTTAA......................................................... 24 0 1 331.00 331 241 77 1 9 3
...........................................................TCTTTGGTTATCTAGCTGCATG................................................................................................. 22 1 1 317.00 317 179 104 8 7 19
...........................................................TCTTTGGTTACCTAGCTGTATG................................................................................................. 22 1 1 310.00 310 158 125 0 7 20
...........................................................TCTTTGGTTATCTAGCTTTATG................................................................................................. 22 1 1 287.00 287 179 83 9 9 7
...........................................................TCTTTTGTTATCTAGCTGTATGA................................................................................................ 23 1 1 287.00 287 184 10 74 18 1
...........................................................TCTTTGGTTATCCAGCTGTATG................................................................................................. 22 1 1 285.00 285 155 95 18 5 12
...........................................................TCTTTGGTTATCTAGCTATATG................................................................................................. 22 1 1 264.00 264 119 135 2 1 7
..........................................................CTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 1 1 263.00 263 151 90 0 15 7
...........................................................TCTTTGGTTATCTAGCTGTACG................................................................................................. 22 1 1 263.00 263 137 97 7 8 14
...........................................................TCTTCGGTTATCTAGCTGTATG................................................................................................. 22 1 1 261.00 261 144 93 3 3 18
..................................................................................................TAAAGCTAGCTTACCGAAG............................................................. 19 0 1 256.00 256 18 225 2 9 2
...........................................................TCTTTGGTTATCTGGCTGTATG................................................................................................. 22 1 1 251.00 251 154 73 5 8 11
...........................................................TCTCTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 249.00 249 133 94 2 2 18
...........................................................TCTTTGGTTATCTCGCTGTATG................................................................................................. 22 1 1 247.00 247 135 100 1 0 11
...........................................................TCTTTGGTCATCTAGCTGTATG................................................................................................. 22 1 1 244.00 244 118 101 5 1 19
...........................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................. 21 1 1 243.00 243 10 98 55 68 12
..................................................................................................TAAAGCTAGCTTACCGAAGT............................................................ 20 0 1 241.00 241 46 160 0 12 23
...........................................................TCTTTGGTTATATAGCTGTATGA................................................................................................ 23 1 1 241.00 241 106 63 3 69 0
...........................................................TCTTTGGTTGTCTAGCTGTATG................................................................................................. 22 1 1 235.00 235 129 83 5 3 15
...........................................................TATTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 230.00 230 169 58 0 2 1
...........................................................TCCTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 225.00 225 150 26 30 15 4
...........................................................TCTTTGGTTATCTAGATGTATGA................................................................................................ 23 1 1 225.00 225 158 58 4 4 1
...........................................................CCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 222.00 222 121 67 16 12 6
...........................................................TCTTTAGTTATCTAGCTGTATG................................................................................................. 22 1 1 219.00 219 100 102 1 11 5
...........................................................TCTTTGGTTATCTAGCTGTATGAC............................................................................................... 24 1 1 218.00 218 80 26 101 10 1
...........................................................TCTTTGGTTATCCAGCTGTATGA................................................................................................ 23 1 1 217.00 217 126 23 54 9 5
...........................................................TCTTTGGTTATCTAGCTG..................................................................................................... 18 0 1 211.00 211 1 4 203 3 0
...........................................................TCTTTGTTTATCTAGCTGTATGA................................................................................................ 23 1 1 208.00 208 109 14 74 11 0
...........................................................TCTTTGGCTATCTAGCTGTATGA................................................................................................ 23 1 1 208.00 208 137 31 30 8 2
...........................................................TCTTTGGTTATCTAGCTGTATTA................................................................................................ 23 1 1 207.00 207 171 14 0 15 7
...........................................................TCTTTGGTTATCTAGCCGTATGA................................................................................................ 23 1 1 205.00 205 131 26 28 9 11
...........................................................TCTTTGGTTATCTAGCTGTCTG................................................................................................. 22 1 1 201.00 201 90 98 1 0 12
...........................................................TCTTTCGTTATCTAGCTGTATG................................................................................................. 22 1 1 200.00 200 101 82 8 2 7
...........................................................TCTTTGGTTATCTAGCTGTGTG................................................................................................. 22 1 1 198.00 198 109 70 2 10 7
...........................................................TCTTTGGTTATCTACCTGTATG................................................................................................. 22 1 1 198.00 198 111 72 4 5 6
...........................................................TCTTTGGTTATCTAACTGTATG................................................................................................. 22 1 1 190.00 190 59 121 3 4 3
...........................................................TCTTTGGTTATCTAGCTCTATG................................................................................................. 22 1 1 187.00 187 87 86 2 1 11
...........................................................TTTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 187.00 187 87 87 6 3 4
...........................................................ACTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 177.00 177 30 131 1 8 7
...........................................................TCTTTGGTTATTTAGCTGTATG................................................................................................. 22 1 1 177.00 177 75 65 5 20 12
...........................................................TCTTTGGTTATCTAGCTGCATGA................................................................................................ 23 1 1 175.00 175 117 24 20 9 5
...........................................................TCTTTGGTTATCTAGTTGTATG................................................................................................. 22 1 1 171.00 171 80 74 3 5 9
...........................................................TCTTTGGTTATCTAGCTGTATGAG............................................................................................... 24 0 1 169.00 169 70 46 37 13 3
............................................................TCTTGGTTATCTAGCTGTATGA................................................................................................ 22 2 1 162.00 162 122 22 6 9 3
..........................................................CTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 161.00 161 130 13 0 18 0
...........................................................TCTTTGGTGATTTAGCTGTATG................................................................................................. 22 2 1 160.00 160 125 23 0 7 5
...........................................................TCTTTGGTTATCTAGCTGTACGA................................................................................................ 23 1 1 148.00 148 96 27 13 6 6
...........................................................TCTTTGGTTATGTAGCTGTATGA................................................................................................ 23 1 1 142.00 142 10 2 2 127 1
...........................................................TCTTTGGTTACCTAGCTGTATGA................................................................................................ 23 1 1 140.00 140 103 17 11 7 2
...........................................................TCTTCGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 139.00 139 92 16 14 12 5
...........................................................GCTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 136.00 136 12 116 1 6 1
...........................................................TCTTTGGTTATCTAGCTGTATAA................................................................................................ 23 1 1 134.00 134 53 62 8 10 1
...........................................................TCTTTGGTTATCTAGCTGTATGTT............................................................................................... 24 2 1 131.00 131 2 14 97 14 4
...........................................................TCTTTGGTTATGTAGCTGTATG................................................................................................. 22 1 1 126.00 126 22 8 0 94 2
...........................................................TCTTTAGTTATCTAGCTGTATGA................................................................................................ 23 1 1 125.00 125 86 22 7 7 3
.................................................................................................ATAAAGCTAGCTTACCGAAG............................................................. 20 0 1 122.00 122 11 104 0 4 3
..................................................................................................TAAAGCTAGCTTACCGAAGTTAT......................................................... 23 1 1 122.00 122 51 66 0 2 3
...........................................................TCTCTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 118.00 118 78 24 6 5 5
...........................................................TCTTTCGTTATCTAGCTGTATGA................................................................................................ 23 1 1 117.00 117 70 19 17 10 1
...........................................................TCTTTGGTCATCTAGCTGTATGA................................................................................................ 23 1 1 115.00 115 75 22 10 4 4
...........................................................TCTTTGGTTATCTGGCTGTATGA................................................................................................ 23 1 1 115.00 115 81 11 13 8 2
...........................................................TCTTTGGTTCTCTAGCTGTATG................................................................................................. 22 1 1 114.00 114 54 56 1 0 3
...........................................................TCTTTGGTTATCTAGCTGTGTGA................................................................................................ 23 1 1 114.00 114 85 12 11 6 0
...........................................................TCTTTGGTTATCTAGCTTTATGA................................................................................................ 23 1 1 114.00 114 80 12 11 8 3
...........................................................TCTTTGGTTATCTAGCTGTATCC................................................................................................ 23 2 1 113.00 113 0 14 80 19 0
...........................................................TCTTTGGTTATCTAGCTGTATGAAT.............................................................................................. 25 1 1 111.00 111 8 18 79 6 0
...........................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................. 21 1 1 109.00 109 24 6 75 3 1
...........................................................TCTTTGGTTATCAAGCTGTATGA................................................................................................ 23 1 1 108.00 108 17 8 77 5 1
...........................................................TCTTTGGTTATCTACCTGTATGA................................................................................................ 23 1 1 108.00 108 65 15 20 8 0
...........................................................TCTTTGGTTATCTAGCTATATGA................................................................................................ 23 1 1 105.00 105 57 30 11 5 2
...................................................................................................AAAGCTAGCTTACCGAAGTTA.......................................................... 21 0 1 104.00 104 29 8 0 67 0
...........................................................TCTTTGGTTATCTAGCTGTT................................................................................................... 20 1 1 102.00 102 0 3 72 19 8
...........................................................TTTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 102.00 102 69 20 3 7 3
...........................................................TCTTTGGTTATCGAGCTGTATGA................................................................................................ 23 1 1 101.00 101 7 0 93 1 0
...........................................................TCTTTGATTATCTAGCTGTATG................................................................................................. 22 1 1 101.00 101 71 19 4 0 7
...........................................................TCTTTGGTTATCTAGCTGAATG................................................................................................. 22 1 1 100.00 100 20 74 2 1 3
...........................................................TCTTTGCTTATCTAGCTGTATG................................................................................................. 22 1 1 97.00 97 60 15 14 3 5
...........................................................TCTTTGGTTATCTAGCTGTATCCC............................................................................................... 24 3 1 96.00 96 0 21 68 7 0
...........................................................TCTTTGGTTGTCTAGCTGTATGA................................................................................................ 23 1 1 96.00 96 70 16 5 3 2
..............................................................TTGGTTATCTAGCTGTATG................................................................................................. 19 0 1 87.00 87 25 28 1 30 3
...........................................................TCTTTGGTTATCTAACTGTATGA................................................................................................ 23 1 1 86.00 86 40 30 8 6 2
...........................................................TCTTTGGTTATTTAGCTGTATGA................................................................................................ 23 1 1 84.00 84 39 16 7 19 3
...........................................................TCTTTGGTTATCTAGTTGTATGA................................................................................................ 23 1 1 83.00 83 46 15 11 6 5
...........................................................TCTTTGGATATCTAGCTGTATG................................................................................................. 22 1 1 83.00 83 20 47 8 6 2
...........................................................TCTTTGGTTATCAAGCTGTATG................................................................................................. 22 1 1 83.00 83 24 21 32 4 2
..............................................................TTGGTTATCTAGCTGTATGA................................................................................................ 20 0 1 79.00 79 16 9 2 50 2
...........................................................TCTTTGGTTAACTAGCTGTATG................................................................................................. 22 1 1 79.00 79 33 40 0 1 5
...........................................................TCTTTGGTTATCTAGCTGTAAG................................................................................................. 22 1 1 77.00 77 9 64 2 1 1
...........................................................TCTTTGGTTATCTAGCTGTATCA................................................................................................ 23 1 1 72.00 72 46 15 3 6 2
...........................................................TCTTTGGTTATCTAGCTGTTTG................................................................................................. 22 1 1 71.00 71 27 39 0 1 4
............................................................TTTTGGTTATCTAGCTGTATG................................................................................................. 21 1 1 71.00 71 16 51 0 2 2
...........................................................TCTTTGGTTATCTATCTGTAT.................................................................................................. 21 1 1 69.00 69 5 6 42 16 0
...........................................................TCTTTGGTTATCTAGCTGG.................................................................................................... 19 1 1 67.00 67 1 0 66 0 0
...........................................................TCTTTGGTTATCTAGCTGTCTGA................................................................................................ 23 1 1 67.00 67 44 17 3 0 3
...........................................................TCTTTGGTTATCTAGCTCTATGA................................................................................................ 23 1 1 66.00 66 48 11 3 1 3
.................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................ 21 0 1 66.00 66 15 35 0 4 12
.............................................................TTTGGTTATCTAGCTGTAT.................................................................................................. 19 0 1 64.00 64 11 4 3 46 0
...........................................................TCTTTGCTTATCTAGCTGTATGA................................................................................................ 23 1 1 63.00 63 39 2 14 4 4
...........................................................TCTTTGGTTATGTAGCTGTAT.................................................................................................. 21 1 1 61.00 61 1 0 2 58 0
...........................................................TCTTTGGTTATCTCGCTGTATGA................................................................................................ 23 1 1 61.00 61 47 14 0 0 0
...........................................................ACTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 60.00 60 18 32 6 4 0
...........................................................TCTTTGATTATCTAGCTGTATGA................................................................................................ 23 1 1 58.00 58 44 2 8 2 2
.............................................................TCTTGTTATCTAGCTGTATGA................................................................................................ 21 2 1 57.00 57 33 4 17 2 1
...........................................................TCTTTGGGTATCTAGCTGTATGA................................................................................................ 23 1 1 56.00 56 15 1 29 11 0
............................................................CTTTGGTTATCTAGCTGTATGAA............................................................................................... 23 1 1 55.00 55 1 0 0 54 0
...........................................................TCTTTGGTTATCTAGCTGTAGG................................................................................................. 22 1 1 55.00 55 10 12 31 1 1
............................................................TCTTTGTTATCTAGCTGTATGA................................................................................................ 22 3 3 54.67 164 70 17 62 12 3
...........................................................TCTTTGGTTATCTAGCAGTATG................................................................................................. 22 1 1 54.00 54 26 25 0 0 3
...........................................................TCTTTGGTTATCGAGCTGTATG................................................................................................. 22 1 1 54.00 54 12 3 36 2 1
...................................................................................................AAAGCTAGCTTACCGAAGTT........................................................... 20 0 1 54.00 54 15 10 0 28 1
...........................................................TCTTTGTTTATCTAGCTGTAT.................................................................................................. 21 1 1 52.00 52 1 1 38 11 1
...............................................................TGGTTATCTAGCTGTATGA................................................................................................ 19 0 1 51.00 51 11 13 0 27 0
...........................................................TCTTTGGTTATCTAGCTATGA.................................................................................................. 21 3 4 50.00 200 140 23 13 17 7
...........................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................. 26 3 1 49.00 49 13 4 26 5 1
...........................................................TCTTTGGTTATCTAGCTGGATG................................................................................................. 22 1 1 47.00 47 27 14 2 2 2
...........................................................TGTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 44.00 44 29 13 0 1 1
...........................................................TCTTTGGTTATCTAGCTGTATGTC............................................................................................... 24 2 1 44.00 44 0 6 32 5 1
...........................................................TCTTTGGATATCTAGCTGTATGA................................................................................................ 23 1 1 44.00 44 13 9 15 6 1
...........................................................TCTTTGGTTATCGAGCTGTAT.................................................................................................. 21 1 1 43.00 43 0 0 42 1 0
............................................................CTTTGGTTATCTAGCTGTATGT................................................................................................ 22 1 1 42.00 42 0 0 1 41 0
..................................................................................................TAAAGCTATCTTACCGAAGTTA.......................................................... 22 1 1 42.00 42 35 7 0 0 0
...........................................................GCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 42.00 42 11 22 2 5 2
...........................................................TCTTTGGTTCTCTAGCTGTATGA................................................................................................ 23 1 1 42.00 42 30 10 1 0 1
...........................................................TCTTTGGGTATCTAGCTGTATG................................................................................................. 22 1 1 41.00 41 16 8 15 1 1
...........................................................TCTTTGGTTATATAGCTGTAT.................................................................................................. 21 1 1 41.00 41 0 11 4 26 0
...........................................................TCTTTGGTTATCTAGCTGGATGA................................................................................................ 23 1 1 41.00 41 25 5 9 2 0
............................................................CTTTGGTTATCTAGCTGTA................................................................................................... 19 0 1 39.00 39 0 0 0 39 0
...........................................................TCATTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 38.00 38 22 16 0 0 0
...........................................................TCTTTGGCTATCTAGCTGTAT.................................................................................................. 21 1 1 37.00 37 4 7 14 7 5
...........................................................TCTTTTGTTATCTAGCTGTAT.................................................................................................. 21 1 1 37.00 37 3 4 25 5 0
...........................................................TCTTAGGTTATCTAGCTGTATG................................................................................................. 22 1 1 37.00 37 19 15 0 1 2
...........................................................TCTTTGGTTATCTAGCTGTATGTA............................................................................................... 24 2 1 37.00 37 0 0 28 8 1
...........................................................TCTTTGGTTATCTAGCTGAATGA................................................................................................ 23 1 1 37.00 37 14 18 3 1 1
............................................................TTTTGGTTATCTAGCTGTATGA................................................................................................ 22 1 1 36.00 36 17 8 5 3 3
...........................................................TCTTTGGTTATCTAGCTGTC................................................................................................... 20 1 1 34.00 34 1 0 28 5 0
...........................................................TCTTTGGTTATCTTGCTGTATG................................................................................................. 22 1 1 34.00 34 18 12 1 2 1
...........................................................CCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 34.00 34 3 15 10 5 1
...........................................................TCTTTGGTTATCTAGGTGTATG................................................................................................. 22 1 1 34.00 34 20 9 0 2 3
...........................................................TCTTTGGTGATTTAGCTGTAT.................................................................................................. 21 2 1 33.00 33 23 6 0 3 1
..................................................................................................TAAAGCTAGCTTACCTAAGTTA.......................................................... 22 1 1 31.00 31 26 5 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTATGTCC.............................................................................................. 25 3 1 31.00 31 0 6 19 6 0
..................................................................................................TAAATCTAGCTTACCGAAGTTA.......................................................... 22 1 1 31.00 31 26 5 0 0 0
...........................................................TCCTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 30.00 30 5 7 9 7 2
...........................................................TCTTTGGTTATCAAGCTGTAT.................................................................................................. 21 1 1 30.00 30 0 1 28 1 0
...........................................................TCTTTGGTTATCTAGCTGTAAGA................................................................................................ 23 1 1 30.00 30 15 9 3 1 2
...........................................................TCTTTGGTTATCTAGCAGTATGA................................................................................................ 23 1 1 30.00 30 22 2 3 1 2
...........................................................TCTATGGTTATCTAGCTGTATG................................................................................................. 22 1 1 30.00 30 7 19 1 0 3
..................................................................................................TAAAGCTAGCTTACAGAAGTTA.......................................................... 22 1 1 30.00 30 19 11 0 0 0
..................................................................................................TAAAGATAGCTTACCGAAGTTA.......................................................... 22 1 1 30.00 30 19 11 0 0 0
...........................................................TGTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 30.00 30 22 5 0 3 0
...............................................................TGGTTATCTAGCTGTATG................................................................................................. 18 0 1 29.00 29 11 8 0 10 0
..................................................................................................TAAAGCTAGATTACCGAAGTTA.......................................................... 22 1 1 29.00 29 15 14 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTATGATT.............................................................................................. 25 1 1 29.00 29 4 4 18 3 0
...........................................................TCTTTGGTTAACTAGCTGTATGA................................................................................................ 23 1 1 28.00 28 14 5 4 5 0
.................................................................................................ATAAAGCTAGCTTACCGAAGTTAT......................................................... 24 1 1 28.00 28 11 16 0 1 0
...........................................................TCTTTGGTTTTCTAGCTGTATG................................................................................................. 22 1 1 27.00 27 16 8 1 1 1
...........................................................TCTTTGGTTATCTAGCGGTATG................................................................................................. 22 1 1 26.00 26 15 8 2 0 1
..............................................................TTGGTTATCTAGCTGTAT.................................................................................................. 18 0 1 26.00 26 2 1 5 18 0
...........................................................TCTTAGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 26.00 26 17 2 5 0 2
...........................................................TCTTTGGTTATCCAGCTGTAT.................................................................................................. 21 1 1 26.00 26 3 3 13 6 1
.............................................................TCTTGTTATCTAGCTGTATG................................................................................................. 20 2 3 25.33 76 39 21 8 4 4
...........................................................TCTTTGGTTATCTAGCTGTATGTCT.............................................................................................. 25 2 1 25.00 25 0 3 20 2 0
...........................................................TCTTTGGTTATCTAGGTGTATGA................................................................................................ 23 1 1 24.00 24 8 3 3 9 1
...........................................................TCTTTGGTAATCTAGCTGTATG................................................................................................. 22 1 1 24.00 24 3 21 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTTTGA................................................................................................ 23 1 1 23.00 23 14 8 1 0 0
...........................................................TCTTTGGTTATCTAGCTGCAT.................................................................................................. 21 1 1 23.00 23 4 1 11 6 1
...........................................................TCTTTGGTTATCTAGCTGTATGAAG.............................................................................................. 25 2 1 22.00 22 4 4 12 2 0
...........................................................TCTTTGGTTATCTTGCTGTATGA................................................................................................ 23 1 1 22.00 22 16 5 0 1 0
...........................................................TCTTTGGTTATCTAGCGGTATGA................................................................................................ 23 1 1 22.00 22 13 2 5 2 0
...........................................................TCTTTGGTTATCTAGCCGTAT.................................................................................................. 21 1 1 21.00 21 3 6 5 5 2
...........................................................TCTTTGGTTATCAAGCTGTATGG................................................................................................ 23 2 1 21.00 21 0 0 21 0 0
...........................................................TCTTGGGTTATCTAGCTGTATG................................................................................................. 22 1 1 21.00 21 13 8 0 0 0
..................................................................................................TAAAGCTAGATTACCGAAGTT........................................................... 21 1 1 21.00 21 4 17 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTATGCA............................................................................................... 24 2 1 21.00 21 1 1 19 0 0
..................................................................................................TAAAGATAGCTTACCGAAGTT........................................................... 21 1 1 21.00 21 13 8 0 0 0
...........................................................TCTTTGGTTATCTAGCTAT.................................................................................................... 19 1 1 21.00 21 5 3 4 7 2
...........................................................TCTTTGGTTATCTAGCTGTATGAAC.............................................................................................. 25 2 1 20.00 20 6 2 12 0 0
..................................................................................................TAAAGCTAGCTTACCGAAGTTC.......................................................... 22 1 1 20.00 20 2 11 0 7 0
...........................................................TATTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 20.00 20 6 12 0 0 2
..................................................................................................TAAAGCTAGCTTATCGAAGTTA.......................................................... 22 1 1 19.00 19 12 6 0 0 1
...........................................................TCTTTGGTTATCTAGCTTTAT.................................................................................................. 21 1 1 19.00 19 6 5 5 3 0
...........................................................TCGTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 19.00 19 11 0 1 7 0
..................................................................................................TAAAGCTAGCTTACCGAATTT........................................................... 21 1 1 19.00 19 11 7 0 1 0
..................................................................................................TAAAGCTAGCTTAACGAAGTTA.......................................................... 22 1 1 18.00 18 9 9 0 0 0
...........................................................TCTTTGGTTATCTAGCTGC.................................................................................................... 19 1 2 18.00 36 0 0 36 0 0
................................................................GGTTATCTAGCTGTATGA................................................................................................ 18 0 1 18.00 18 8 0 0 10 0
...........................................................TCTTTCGTTATCTAGCTGTAT.................................................................................................. 21 1 1 18.00 18 2 5 8 2 1
...........................................................TCTATGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 18.00 18 13 2 1 0 2
..................................................................................................TAAAGCTAGCTTACCGAAGCTA.......................................................... 22 1 1 18.00 18 14 3 0 1 0
..................................................................................................TAAAGCTAGCTTACCGAAGCT........................................................... 21 1 1 18.00 18 6 7 0 0 5
.................................................................................................CTAAAGCTAGCTTACCGAAGTT........................................................... 22 1 1 18.00 18 8 8 0 1 1
...........................................................TCTTTGGTTATCTAGCTGTCC.................................................................................................. 21 2 1 18.00 18 0 4 12 2 0
..........................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 0 1 18.00 18 0 0 0 18 0
...........................................................TCTTCGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 18.00 18 2 4 7 4 1
.............................................................TCTGGTTATCTAGCTGTATG................................................................................................. 20 1 1 18.00 18 12 6 0 0 0
..................................................................................................TAAAGCTAGCTTACCGCAGTTA.......................................................... 22 1 1 18.00 18 15 2 0 0 1
..................................................................................................TAAAGCTAGCTTACAGAAGTT........................................................... 21 1 1 17.00 17 3 14 0 0 0
..................................................................................................TAAAGCTATCTTACCGAAGTT........................................................... 21 1 1 17.00 17 12 3 0 0 2
...........................................................TCTTTGGTTATCTAGATGTAT.................................................................................................. 21 1 1 17.00 17 2 9 3 2 1
...........................................................TCTTTGGTTATCTAGCTATAT.................................................................................................. 21 1 1 17.00 17 3 3 7 3 1
...........................................................TCTTTGGTTATCTAGCTGTTT.................................................................................................. 21 1 1 17.00 17 1 0 5 9 2
...........................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................. 22 2 1 17.00 17 0 3 3 10 1
..................................................................................................TAAAGCTAGCTTACCAAAGTTA.......................................................... 22 1 1 17.00 17 13 4 0 0 0
..................................................................................................TAAAGCTAGCTTACTGAAGTTA.......................................................... 22 1 1 17.00 17 12 5 0 0 0
...........................................................TCTTGGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 16.00 16 11 2 2 1 0
...........................................................TCTTTGGTTATTTAGCTGTAT.................................................................................................. 21 1 1 16.00 16 0 3 2 11 0
..................................................................................................TAAAGCTAGCTTACCGAAGTTG.......................................................... 22 1 1 16.00 16 10 4 1 0 1
...........................................................TCTTTGGTTATCGAGCTGTATGG................................................................................................ 23 2 1 16.00 16 0 0 16 0 0
..................................................................................................TAAAGCCAGCTTACCGAAGTTA.......................................................... 22 1 1 16.00 16 13 2 0 0 1
...........................................................TCTTTGGTTATCTGGCTGTAT.................................................................................................. 21 1 1 16.00 16 3 4 5 3 1
..........................................................TTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 16.00 16 0 1 0 15 0
..................................................................................................CAAAGCTAGCTTACCGAAGTTA.......................................................... 22 1 1 16.00 16 8 8 0 0 0
...........................................................TCTTTGGTTACCTAGCTGTAT.................................................................................................. 21 1 1 15.00 15 3 8 2 2 0
..................................................................................................TAAGGCTAGCTTACCGAAGTTA.......................................................... 22 1 1 15.00 15 11 3 1 0 0
...........................................................TCGTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 15.00 15 7 7 0 1 0
..................................................................................................TAAAGCTAGCCTACCGAAGTTA.......................................................... 22 1 1 15.00 15 13 2 0 0 0
..................................................................................................TAAACCTAGCTTACCGAAGTT........................................................... 21 1 1 15.00 15 7 8 0 0 0
..........................................................TTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 1 1 15.00 15 0 0 0 15 0
..................................................................................................TAAAGCTAGCTTACCGACGTTA.......................................................... 22 1 1 15.00 15 9 6 0 0 0
............................................................TCTTGGTTATCTAGCTGTAT.................................................................................................. 20 2 1 15.00 15 6 3 3 1 2
.................................................................................................ATAAAGCTAGCTTACCTAAGTTA.......................................................... 23 1 1 14.00 14 13 1 0 0 0
...........................................................TCATTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 14.00 14 9 3 0 2 0
..................................................................................................CAAAGCTAGCTTACCGAAGTT........................................................... 21 1 1 14.00 14 1 11 0 0 2
..........................................................ATCTTTGGTTATCTAGCTGTATG................................................................................................. 23 1 1 14.00 14 1 1 0 11 1
..................................................................................................TAAAGCTAGCTTACCGAATTTA.......................................................... 22 1 1 14.00 14 10 4 0 0 0
..................................................................................................TAAAGCTAGCTTACCTAAGTT........................................................... 21 1 1 14.00 14 9 5 0 0 0
.................................................................................................CTAAAGCTAGCTTACCGAAGTTA.......................................................... 23 1 1 14.00 14 8 3 0 3 0
..........................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 0 1 14.00 14 0 0 0 14 0
...........................................................TCTTTGGTTATCTAACTGTAT.................................................................................................. 21 1 1 14.00 14 2 3 5 4 0
...........................................................TCTTTGGTTATCTATCTGTA................................................................................................... 20 1 1 14.00 14 1 0 11 2 0
...........................................................TCTTTGGGTATCTAGCTGTAT.................................................................................................. 21 1 1 14.00 14 0 0 12 2 0
..........................................................CTCTTTGGTTATCTAGCTGTAT.................................................................................................. 22 1 1 14.00 14 6 3 0 5 0
...........................................................TCTTTGGTTATCTAGCTGTATGACA.............................................................................................. 25 2 1 14.00 14 0 2 12 0 0
...........................................................TCTTTGGTTATCTATCTGTATGG................................................................................................ 23 2 1 14.00 14 0 0 14 0 0
..................................................................................................TAAAGCTAGCTTACCGAGGTTA.......................................................... 22 1 1 14.00 14 11 2 0 1 0
..................................................................................................TAAAGCTAGCTTACCGCAGTT........................................................... 21 1 1 13.00 13 4 9 0 0 0
............................................................CTTTGGTTATCGAGCTGTATGA................................................................................................ 22 1 1 13.00 13 0 0 0 13 0
...........................................................TCTTTGGTTATCTAGCTGTG................................................................................................... 20 1 1 13.00 13 1 0 11 1 0
...........................................................TCTTTGGTTATCTAGCTGTATGAGT.............................................................................................. 25 0 1 13.00 13 1 2 9 0 1
..................................................................................................TAAAGCTAGCTTACCGAAATT........................................................... 21 1 1 13.00 13 1 12 0 0 0
..................................................................................................TAAAGCTAGCTTACCGAAGTC........................................................... 21 1 1 13.00 13 3 6 2 1 1
..................................................................................................TAAAGCTGGCTTACCGAAGTTA.......................................................... 22 1 1 13.00 13 9 3 0 1 0
..................................................................................................TAAATCTAGCTTACCGAAGTT........................................................... 21 1 1 13.00 13 9 4 0 0 0
..........................................................ATCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 13.00 13 1 0 1 11 0
...........................................................TCTGTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 13.00 13 7 5 0 1 0
..................................................................................................TAAAGCTCGCTTACCGAAGTTA.......................................................... 22 1 1 13.00 13 8 5 0 0 0
...........................................................TCTTTGGTTATCTAGTTGTAT.................................................................................................. 21 1 1 12.00 12 1 3 6 2 0
....................................................................................................AAGCTAGCTTACCGAAGTTA.......................................................... 20 0 1 12.00 12 6 2 0 4 0
...........................................................TCTTTGGTTGTCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 2 1 5 4 0
..................................................................................................TAAAGCTAGCTTACCCAAGTTA.......................................................... 22 1 1 12.00 12 7 5 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTAGGA................................................................................................ 23 1 1 12.00 12 9 2 1 0 0
....................................................................................................AAGCTAGCTTACCGAAGTT........................................................... 19 0 1 12.00 12 5 4 0 3 0
...........................................................TCTTTGGTTTTCTAGCTGTATGA................................................................................................ 23 1 1 12.00 12 5 3 1 1 2
..................................................................................................TAAACCTAGCTTACCGAAGTTA.......................................................... 22 1 1 12.00 12 7 4 0 1 0
...........................................................TCTTTGGTTATCTAGCTGTATGATC.............................................................................................. 25 2 1 12.00 12 0 1 8 3 0
...........................................................TCTTTGCTTATCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 1 1 7 2 1
..................................................................................................TAAAGTTAGCTTACCGAAGTTA.......................................................... 22 1 1 12.00 12 7 4 0 1 0
...........................................................TCTTTGGTCATCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 1 2 4 4 1
............................................................CTTTGGTTATCTAGCTGT.................................................................................................... 18 0 1 12.00 12 0 0 0 12 0
..................................................................................................TAAAGCTAGCTTACCGAAGTCA.......................................................... 22 1 1 12.00 12 7 5 0 0 0
.................................................................................................ATAAAGCTATCTTACCGAAGTTA.......................................................... 23 1 1 12.00 12 12 0 0 0 0
...........................................................TTTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 11.00 11 3 2 3 2 1
..................................................................................................TAAAGCTAGCTTACCAAAGTT........................................................... 21 1 1 11.00 11 5 6 0 0 0

Anti-sense strand reads

TAGTTATACTACTTGTTAGCTTTTACAACACTGGGAGCGTATATGTCCCACGATACAACAGAAACCAATAGATCGACATACTCACTATGTATTGCAGTATTTCGATCGAATGGCTTCAATTATAATCGCAGACAAGTAGTCAGTACACTTGCTTTTTCTTTTCATTTTGGATTTTTGT

*******************************************((((..(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).)))).))))..******************************************** 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 M020

head
.............................................................................................................................GCGCAGACAAGTAGTCTGT.................................. 19 2 2 0.50 1 1 0
..............................................CCCACGATAGAACAGGAA.................................................................................................................. 18 2 2 0.50 1 0 1
...............................................................................................................GGCTTCTATTACAATTGCAG............................................... 20 3 8 0.13 1 1 0
................TAGCTTTTGCAACATTGG................................................................................................................................................ 18 2 8 0.13 1 1 0
.................................................ACAGTATAACAGAAACCAATA............................................................................................................ 21 3 16 0.06 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004540:842183-842360 + dwi-mir-9a Known_mirbase ATCAATATGA--------------------------------------------------------T----GA-ACAATC-----GAAAATGTTGTG------ACCCTCGCATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCATCAGTCATGTGAACGAAAAAG-----AAAAGTAAAACC--------------------------TAAAAACA
droVir3 scaffold_13049:13137014-13137109 + dvi-mir-9a Known_mirbase -----------------------------------------------------------------------------------------------------------------ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------------------------------------------------------------------
droMoj3 scaffold_6680:14226505-14226624 - dmo-mir-9a Known_mirbase GTCAAAGCGA------------CAGC-------------------------------------------------CAATG-----G-----------------G---A---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------------------------------------------------------------------
droGri2 scaffold_15110:23882687-23882835 + dgr-mir-9a Known_mirbase ATTAAAACGAGCAACAAGCAGAAAGCA---------------------------------------------A-ATAGGA-----T--TGTGCAAGTT--TGTGCCGC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCA------------------------------------------------------------------------
dp5 XR_group8:7634787-7634913 + dps-mir-9a Known_mirbase AT---------------------------------------------------------------------CG-ATAGAA-----T--GGTGTAATTTAAAGTTCTTC-----AATCA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------------------------------------------------------------------
droPer2 scaffold_48:412927-413053 + dpe-mir-9a Known_mirbase AT---------------------------------------------------------------------CG-GTAGAA-----T--GGTGTAATTTAAAGTTCTTC-----AATCA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------------------------------------------------------------------
droAna3 scaffold_13337:17332407-17332520 - dan-mir-9a Known_mirbase -----------------------------------------------------------------------------------------------------------------------------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAGTCCAAAAAAGGAAA-------------------------------------
droBip1 scf7180000396741:632307-632525 - AATA---TAA-----------------TATAATAGTTCATTTGTGTTAAACACTTTCCTTTCCCTTTTTTTCAAACAATACTCCCACAAATCTT-------------------ATACAACACTATGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCAAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACTCA------------------
droKik1 scf7180000302694:81669-81797 + TT---------------------------------------------------------------------CA-GCAATG-----CCGAGTGTTACACAATCAACTCC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------------------------------------------------------------------
droFic1 scf7180000453831:108841-108996 + TT-----------------------------------------------------------CGCTTT----CG-ACAATT-----GCCAGTGTTACACAATCCCATCC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACGG-CC-AAAAAGGAAA-------------------------------------
droEle1 scf7180000491249:6854971-6855150 + T------------------------------------------------------------CCCTTT----CA-ACAATT-----CGCAGTGTTATATAATCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AAAAAGCCAACCCACGTTGCGTATACCGAACATT-------------
droRho1 scf7180000779964:5229-5440 + ATTAACAAAA--------------------------------GAGGAGACCACTTTCCTTTCCCTTT----CA-ACAATT-----CCAAGTGTTATATAACCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AGAAAGTAAACCCACGTTGCGTATACTTAACATAAA-------AA--
droBia1 scf7180000302377:2053622-2053750 - TT---------------------------------------------------------------------CA-GCGGTT-----CCCAGTGTTATGCAATCGACTCC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------------------------------------------------------------------
droTak1 scf7180000415276:67404-67595 + TT-----------------------------------------------------------CCCTTT----CA-GCAATT-----CACAGTGTTATATAATCGACTTT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAA-CC-GAAAAG-AAGCACACGTTGCGTATACTCAACGTGAAACAAAAAAGCA
droEug1 scf7180000409472:104871-105041 + TT-----------------------------------------------------------CCCTTT----CA-ACAATT-----CGCGGCGTTATGCAATCTACTAT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCA------------GCGAAACAG-CC-AAAAAGCAAGCCCACGTTGCGTATA----------------------
dm3 chr3L:19558181-19558317 + dme-mir-9a Known_mirbase TT-----------------------------------------------------------CCCTTT----CA-ACCATC-----TGCAGTGTTACACAATCGACTCT---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCA------------------------------------------------------------------------
droSim2 3l:19208458-19208588 + dsi-mir-9a Known_mirbase TT---------------------------------------------------------------------CA-ACCATT-----TGCAGTGTTACACAACCGGCTCT---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------------------------------------------------------------------
droSec2 scaffold_29:261334-261470 + dse-mir-9a Known_mirbase TT-----------------------------------------------------------CCCTTT----CA-ACCATC-----TGCAGTGTTACAAAACCGGCTCT---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------------------------------------------------------------------
droYak3 3L:20989368-20989536 - dya-mir-9a-1 Known_mirbase TT---------------------------------------------------------------------CA-ACCATC-----CGCAGTGTTACACAACCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACTG-CC-AAAAACAAAACCCACGTTGCGTATACTTA------------------
droEre2 scaffold_4784:19355635-19355788 + der-mir-9a Known_mirbase TT---------------------------------------------------------------------CA-ACCATC-----TGCAGTGTTACATAACCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACAAAGCCCA---------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ATCAATATGA--------------------------------------------------------T----GA-ACAATC-----GAAAATGTTGTG------ACCCTCGCATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCATCAGTCATGTGAACGAAAAAG-----AAAAGTAAAACC--------------------------TAAAAACASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221328196.0032819615105184811650518746490641
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231199658.001996583726824072489111501918408
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21132524.00325241405110386194929703168
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................22117216.001721659951152126933361
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2118937.0089372840729244313779
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................2316003.006003579427611561
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2314825.0048258250374088442
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2013627.0036272650572126100179
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2413518.003518987522791487443
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2212610.0026100145691760636
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2312115.0021151168524107147169
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2212100.002100151892715333
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2111676.001676513309184148
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................2311346.0013461206658247
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................2311333.00133324215833441
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................251893.008934206715251140
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191757.00757426193285852
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................201752.007520749003
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................221582.00582115781530074
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221580.005802425610106166
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................241564.005642501181111273
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201527.0052759227243160
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................211502.005024954003
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221443.00443534419143184
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211351.0035114126617332
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241331.0033119324177
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................191256.0025629218225
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211243.002435568121098
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201241.002410122346160
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241218.002181011018026
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................181211.002112033014
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................241169.00169371337046
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................241131.0013197144214
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................201122.0012204311104
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................231122.001220235166
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATCC...............................................................................................................................231113.0011380190014
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................211109.001097531246
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................211104.001040670298
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201102.001027219803
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATCCC..............................................................................................................................24196.00966870021
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19187.008713032528
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20179.00792502169
..........................................................................................................................................TCTTTGGTTATCTAGCTGG...................................................................................................................................19167.0067660010
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................21166.006604121535
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................19164.00643460114
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23155.0055054010
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20154.005402811510
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19151.005102701113
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................................................26149.00492651134
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTC..............................................................................................................................24144.0044325106
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22142.0042141000
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19139.0039039000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24137.0037288100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTC..................................................................................................................................20134.0034285010
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTCC.............................................................................................................................25131.0031196006
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18129.00290100118
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT........................................................................................24128.00280101116
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18126.0026518021
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.............................................................................................................................25122.0022122044
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGCA..............................................................................................................................24121.0021190011
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.............................................................................................................................25120.0020120062
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC.........................................................................................22120.0020070211
..........................................................................................................................................TCTTTGGTTATCTAGCTGC...................................................................................................................................19218.0036360000
...............................................................................................................................................GGTTATCTAGCTGTATGA...............................................................................................................................18118.0018010080
..........................................................................................................................................TCTTTGGTTATCTAGCTGTCC.................................................................................................................................21118.0018122004
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...............................................................................................................................24118.0018018000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................................................22117.0017310103
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTG.........................................................................................22116.0016101104
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................................................23114.0014014000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGACA.............................................................................................................................25114.0014120002
..........................................................................................................................................TCTTTGGTTATCTAGCTGTG..................................................................................................................................20113.0013111010
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAGT.............................................................................................................................25113.001390112
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..........................................................................................21113.001321136
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.........................................................................................20112.001204062
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTT..........................................................................................19112.001203054
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGATC.............................................................................................................................25112.001283001
...........................................................................................................................................CTTTGGTTATCTAGCTGT...................................................................................................................................18112.0012012000
droVir3
-----------------------------------------------------------------------------------------------------------------ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221237243.00237243128334782134821567183662056455824501133215402231800131048712875831631175320727142901131031851315313125404134121111610322539514265137161661710422996967719416433127014627619432726075107419573156493819603510730432462469106745013666342722894787710
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231194084.00194084281892832547633299942894168166413632453803233345194258516998113543734323274912782821771095242116033699976197394911833935226636573141429252187633522522103797818961644106015851278775647128421287737413143282711216736935212816557523664117894017378251190612668
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21193444.009344412244619147532225116215533316225294600061973830148236413068964222614833649167937917110733775874231465355319751713185546622020024314112218312320125937215038971694654011178435041791106544884922126197197199
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................22123504.002350471411901375202725192112003216190930386097452030411391207101315151092618667242041626211335635335745980532561891894133736465013523762891149559165020755228504400100000000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2318260.008260888325615515804600055341999727622815811024639345214276468145381348431321351070801114146119266194192383170291213137128867056103776113110901100000001010100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2317502.007502118405106774351337211553000222140591928139343382908538514061214043403560101839610121244751881014326192658604664410671281331961211628372950
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2116684.00668419533164616678331274001735347131346408203121483392244531643041122230138305251510004064445107985355256461849700300100001000100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2216580.00658027772169248132481136520001074117773715481188314101072310120372000011230000000000000000021337842928802000021204000463
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2015436.00543621969364710712709724400000946618483915512440723735710638840890000013111016102224365351886950655945453417072802950157823294417153171122131914
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2414748.004748681675012122112528054100129012443157553817317279238103208328137361117681616612540001434313911138146146041672542572301010211013501118252520
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................2312963.00296370620333650051304000000000040000000471608010001200000210314322330041591901001112202010000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2212434.002434214521240202362330000161743684964419828702252678827683215112903400013971142012198274343165217535404300100000001001
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2212194.002194032050380302020000430000304000204155120200020800000010100010100011141000001000000001000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2111671.0016710015651403000500002002205010000029020400000600000000000000000001282900000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................2411436.0014363785177812230100270000432113291264165713020361074092052021107801210311266796578323219177010408332253512689
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................1911305.0013054310326460771262500004326142821735152962040316531520700100265000001101001300513041564600120000111600222
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................2011184.001184001111000000000003303620270000221851102000002000000000000000000002300000000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231890.00890013020107030000122541884493176299020123872277403000105000011210011220110321322401100000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................251660.00660317761140122201130003913215541434400141131882301201410180000010121122651213164250000344431263298118
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................231627.006279763163124221400001022221381310010251502800001510010138273116285342756441200000000000000100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................211617.006175325352450200000000350010803000001312030000050000000000000000001115700000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211433.004332538430732190000231857523317000001225709000001200000000000000000001993300000000222000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................241420.004202511459140500030000121436511021410000115310011000011100000110111110011121283100000001200211010
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201395.0039503962101070280000031112192400000993100280000131000000000000000000135304800000000000001000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221360.00360321487416032150000125631071200000442905001006000001001021001110133304200000100000000040
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241306.0030600151010802000038176211514523360010114242181100260000010000100000000016111400000000000000000
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211292.0029220122290407260000320143204010106861206000105000000010001000110213122100000200000010000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221292.00292325733021304000074032220071000041012040000010000000000000000000029802701000000000000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211288.00288012560112050000181191813821412000108931209000001000000001001020010000315400000000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201282.00282011315050209000029138131210330140210079250700000300010001101200002102223600000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................181216.00216236583140403200012004022390000051651801010003001000000121100024130000000101012000010
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................231193.0019310260000103000013532165136291001004120140000060000000000000000000719300000003000000000
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................211166.00166001151000000000074115002100000365300001100000000000011001100112200000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241165.001654309370302020000000200312000001334020000010001021041232510103104400010200202000131
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................191152.001520270112010000003742212140000033413060000130000000000000000000111300001000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201133.0013363931103000000001220113210000001030100000400000000000000000000191100000000010000000
..........................................................................................................................................TCTTTGGTTATCTAGC......................................................................................................................................161129.001290000000000000000000000000000000000000000000003391210172791210522800000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................211114.00114165053010000000018000070001000131301000003000000000000000000016200000000000000100
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................201109.001090013000040300005506350860000043140000000000000000000000000001271100000000000000000
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................201103.0010302407070000000001010040400000222807000103000000000000000000023300300000001000000
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................191100.00100003830610000000011000111200000303803000009000000000000000100004400000000000010000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24194.00942181550200000000100100101000101405010100020000000000000000000913800000000020000001
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22194.009400921000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23190.0090004000000100008831226051200000153301000001000001000001200000043400000000000000000
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18182.00820022002000000003124018030010011703010000004000000000000000000000000000000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................22178.0078017100000000009121041071100000242401000001000001000010000000006200000000000000000
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19177.0077001900801000000330200303000102113217000003000000000000000000001000010100001000001
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18168.006801350051000000004110000200010013504000003000000000000000000000100000000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................19167.006700511303010000322325176000000120010000020000000000000000100015000000000000000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19161.006100600000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20161.006100400000001000040022102200000220100000000000000000000000000002000000000000000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.........................................................................................23158.00580050000000000072263514600000030303000001000000000000000000003400000000000000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT........................................................................................24151.00510030000001000071292325000110030400001000000000000000010000013100000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24150.005031081021000000000110001200000010201000001000000000000011000005400000010000000201
..........................................................................................................................................TCTTTGGTTATCTAGCTGG...................................................................................................................................19146.004673900000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23144.004400400000000000000000000200000010000000000000000000000000000001000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................................................26143.00433720000000000041210000500000212100004000000000000000000000001300000010000001101
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGATC.............................................................................................................................25137.00371519000000000000000000000000000000000000000003003023121001500000000000000000000
.................................................................................................................................................................GTGATAAATAACGTC................................................................................................................15137.00370000000000000000000000000000000000000000000334258210113000400000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAAT................................................................................................................................22134.003401100000000000000010300000000000000000000000000000000000000422200000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................23132.0032010101000000001100001000000000000100000000000000000000000001410100000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGC...................................................................................................................................19132.003242401000000000000000010000000000000000000000000000000000000001000000001000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC.........................................................................................22131.00310001010200000020110317300000000100000002000000001000000000014000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTACT................................................................................................................................22130.003000000000010000010000170000000000001000000000000000000000000081100000000000000000
...............................................................................................................................................GGTTATCTAGCTGTATGA...............................................................................................................................18129.002900131010000000000100000200000111201100002000000000000000000001000010000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATCC...............................................................................................................................23126.002612110000000000000000000000000000000000000000000000000000000002100000000000000000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................................................23126.002600260000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
GTCAAAGCGA------------CAGC-------------------------------------------------CAATG-----G-----------------G---A---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231600396.0060039642805391914520649749237915004
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221363672.00363672321387466684791112120448232786
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21188888.008888853252124738075387181807015
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................20115626.001562617351816923313064407
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................22113858.0013858238117921434228809311
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2119095.0090957483732665806569559
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2317091.0070919092211492065322284
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2216258.006258464176871655111255
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2315264.0052642139438441362372135
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2214524.00452433692566109721
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................2013846.0038463817125156
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2413741.0037417302221111912246241
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2213504.003504248158712272859067
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2113041.00304124224271154613
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................2212536.002536107395233343283509
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................2112353.0023531203723256
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................2412053.00205326810130611479114
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................2312030.002030208120731011416112
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................2111038.0010381708251674817
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................231953.009534584121478018
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191856.008565436676942129
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221795.007956449251862118
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201676.0067635392956238
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201654.0065499192182129133
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231493.00493632942179324
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241430.004302646223486
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..........................................................................................211373.0037310013710
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................201349.003493210022969
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211339.00339156042613644
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................251323.003237136194310747
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..........................................................................................221317.0031711003123
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211291.00291231122020629
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................211274.00274180300901
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................191224.0022419291015817
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................191218.00218170312111210
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTC..............................................................................................................................241145.001452409244048
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................201133.0013346100842
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................241132.00132155568516
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................191122.00122109000130
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................191121.00121144001030
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATCC...............................................................................................................................231112.00112605816122
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201111.001113803143818
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................241100.001001722134710
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................24197.00971938271714
...............................................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT..........................................................................................23191.00913000880
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22190.009078001110
...........................................................................................................................................CTTTGGTTATCTAGCTGTATC................................................................................................................................21172.00727200000
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18169.006952011132
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18168.006811272433
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGC...........................................................................................20166.00660000660
...............................................................................................................................................GGTTATCTAGCTGTATGA...............................................................................................................................18164.00646100570
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18162.006216800380
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23158.00585200060
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23153.005319911644
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23152.005212912136
............................................................................................................................................TTTGGTTATCTAGCTGTATT................................................................................................................................20151.005113612200
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................20149.00498342824
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.........................................................................................20147.004712400310
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................21145.00456823224
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................23143.0043414111013
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC.........................................................................................22141.00414461233
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.........................................................................................23140.00401701895
droGri2
ATTAAAACGAGCAACAAGCAGAAAGCA---------------------------------------------A-ATAGGA-----T--TGTGCAAGTT--TGTGCCGC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................22134668.00346681636218306
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................23126934.0026934206466288
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21125994.0025994212524742
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2211650.00165016455
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................2011593.00159315903
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2111320.001320129822
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2011180.001180934246
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2211100.001100943157
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................211773.00773530243
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................231604.00604435169
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................241454.0045437579
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................231362.0036230557
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191345.0034525194
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................221245.0024515986
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................241231.0023117853
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................221221.0022118041
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................21189.0089809
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................21188.0088871
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................19185.0085805
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................20184.00846420
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................23181.00811566
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................23173.00733241
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19170.0070700
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................21149.00492524
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22147.0047461
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................20147.00473116
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................22145.00453015
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20140.0040400
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23135.0035350
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................24128.00281810
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18125.0025241
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18125.0025250
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................25125.00251510
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................21124.0024195
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................22122.0022814
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24121.0021183
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19119.0019163
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................23119.0019145
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20118.0018171
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................20117.0017116
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.................................................................................................................................22115.0015150
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................20114.0014104
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..............................................................................................................................23113.0013130
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23112.001275
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...............................................................................................................................24112.0012120
...........................................................................................................................................CTTTGGTTATCTAGCTGT...................................................................................................................................18112.0012120
...........................................................................................................................................CTTTGGTTATCTAGCTGTATT................................................................................................................................21111.0011110
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................19110.001073
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19110.001091
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................2419.00963
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................2118.00853
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTG...............................................................................................................................2318.00880
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................2217.00770
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................1817.00770
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................2316.00633
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................................................2316.00660
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................2416.00633
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................2416.00660
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT........................................................................................2415.00541
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGGC..............................................................................................................................2414.00440
...............................................................................................................................................GGTTATCTAGCTGTATGA...............................................................................................................................1814.00440
............................................................................................................................................TTTGGTTATCTAGCTGTATGT...............................................................................................................................2113.00330
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGGCA.............................................................................................................................2513.00330
....................................................................................................................................................................................AGCTAGCTTACCGAAGTTA.........................................................................................1913.00330
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................2313.00330
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAG..............................................................................................................................2313.00330
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.........................................................................................2313.00330
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.........................................................................................2013.00330
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.............................................................................................................................2513.00330
...........................................................................................................................................CTTTGGTTATCTAGCTGTATA................................................................................................................................2113.00330
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGGCC.............................................................................................................................2513.00330
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................................................2212.00220
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGG...............................................................................................................................2212.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGCT..............................................................................................................................2412.00220
............................................................................................................................................TTTGGTTATCTAGCTGTA..................................................................................................................................1812.00220
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................2412.00211
...........................................................................................................................................CTTTGGTTATCTAGCTGTAA.................................................................................................................................2012.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGCC..............................................................................................................................2412.00220
...............................................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT..........................................................................................2312.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAGG.............................................................................................................................2512.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAGA.............................................................................................................................2512.00220
...........................................................................................................................................CTTTGGTTATCTAGCTGTT..................................................................................................................................1912.00220
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGTT..............................................................................................................................2312.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATAT...............................................................................................................................2312.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAT............................................................................................................................2612.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.............................................................................................................................2512.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................2112.00211
...........................................................................................................................................CTTTGGTTATCTAGCTGTATC................................................................................................................................2112.00220
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTT..........................................................................................1912.00220
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATCG...............................................................................................................................2312.00220
dp5
AT---------------------------------------------------------------------CG-ATAGAA-----T--GGTGTAATTTAAAGTTCTTC-----AATCA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231169434.00169434408407753038613032284623985157146330862707
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221135432.00135432125320261504113083761823601768162193727274
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21196899.00968994125964839813482252044025814146254413950
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2016504.0065047236061173249681544143134631
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2215353.0053533194481447180151716401350
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................2014459.00445904415180540719
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2213498.00349813292261235806136
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2112941.00294119086562273024653620416
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2312839.00283920116556717521868181279364
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2112452.00245202323204300220350
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2212405.00240512929206411131037644539
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2311987.001987110302791152088380317
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................1911678.0016781512848681514125121100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2411564.0015646551123121284274044584
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2211406.00140604534917818099920211
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................2111374.001374322775568140001
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211673.00673021321353920021333
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211414.00414032704115540013
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201406.0040601031128478106112
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................191346.00346024214592301151
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................231325.0032581215447664220111
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221309.003090136441341141701133
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231291.00291073112176818012
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................191274.00274027300000001
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................241269.002692973201381301391
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201256.002565194190933005
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................251199.001991571411562401071
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................231197.0019716444926956006
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................211155.00155014430510002
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201143.0014303659721722000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221140.0014012246945310211
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211134.0013405131741624001
...........................................................................................................................................CTTTGGTTATCTAGCTGT...................................................................................................................................181126.00126012401000010
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................221119.00119011211100031
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................201104.00104038529210740
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241101.00101024206454002
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18186.0086057211020419
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23182.008206003356041
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................24176.007601325217100216
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19176.0076030118060030
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................24176.00762406240100210
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..........................................................................................21174.0074006014000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................20168.006804650548000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATT................................................................................................................................21162.006205800000013
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20162.006205235200000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23151.005105100000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..........................................................................................22146.004600424000000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.................................................................................................................................22142.004204200000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24141.0041015126030014
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................19140.004002815213000
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18134.003461601201017
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19134.003401750300009
............................................................................................................................................TTTGGTTATCTAGCTGTATT................................................................................................................................20132.003204012510001
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...............................................................................................................................24132.003203100000001
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................22129.002901810640000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23124.00240521961000
..........................................................................................................................................TCTTTGGTTATCTAGCTGC...................................................................................................................................19124.002410320000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTAA.................................................................................................................................20121.002102100000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTG...............................................................................................................................23121.002102101600110
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18120.002001010200007
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................21120.00201653311000
............................................................................................................................................TTTGGTTATCTAGCTGTA..................................................................................................................................18119.00190911014003
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..............................................................................................................................23119.001901401000013
..........................................................................................................................................TCTTTGGTTATCTAGCT.....................................................................................................................................17117.001700000000116
...............................................................................................................................................GGTTATCTAGCTGTATGA...............................................................................................................................18117.001701000100015
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.........................................................................................20117.001701201211000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................................................23117.001701700000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC........................................................................................23116.00160171610000
...........................................................................................................................................CTTTGGTTATCTAGCTGTT..................................................................................................................................19115.001501500000000
droPer2
AT---------------------------------------------------------------------CG-GTAGAA-----T--GGTGTAATTTAAAGTTCTTC-----AATCA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................22147996.00479963602467186044197719719725
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................23142291.00422911652652775829339745486714
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21136435.00364352794128308496792100073163
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................2313266.00326632217134147
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2012134.00213473746626237438230
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2111608.001608010258361761326
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2211508.00150821187305343509143
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................201961.00961293106175
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................221911.00911721715112936047
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................231810.008101771744897203111
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................241579.00579162793155129123
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191494.00494321321011318225
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................221471.00471644056410
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................231388.00388851143789315
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................211366.00366133946115
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................231333.0033327232113240
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................221284.00284127447310336
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211218.0021811491418729
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................191108.00108055324197
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................211106.0010673518181
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................23199.00990343152711
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................24197.009734812121912
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................20196.009601721131629
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................25195.0095388361624
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................22195.00951319132615
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................22180.0080051017471
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................21166.0066524941014
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18164.00645060440
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................21158.0058020102917
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................24155.00553827170
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................20149.0049142102210
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................21142.00422451372
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23142.0042014012142
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................20139.00391190784
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................24136.00361831365
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................24134.003402162104
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19129.00290290000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22122.00220200200
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................22122.0022032782
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................19121.0021050763
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................21118.00180152100
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20116.0016343015
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18115.00150110220
...........................................................................................................................................CTTTGGTTATCTAGCTGTATT................................................................................................................................21115.00150150000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.................................................................................................................................22113.00130130000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATCT...............................................................................................................................23111.00111000100
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20111.0011054020
...........................................................................................................................................CTTTGGTTATCTAGCTGT...................................................................................................................................18111.00110100010
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19111.0011131123
............................................................................................................................................TTTGGTTATCTAGCTGTATT................................................................................................................................20111.0011024140
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................20110.0010020530
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................................................26110.0010800020
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................................................22110.0010020161
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24110.0010220114
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................2418.008010151
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................2317.007011032
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................2317.007001150
droAna3
-----------------------------------------------------------------------------------------------------------------------------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAGTCCAAAAAAGGAAA-------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................22182455.0082455142395765314672932479727215
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................23147153.00471531571392401627493692986339
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21125620.0025620124111188100466056671594
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2112997.002997495269413564391397
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2212546.002546839258156389290614
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2212188.00218852625740100435830
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2011979.0019797424465232446108
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2311907.00190711749957117166294
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2211759.0017592705670306274234
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2311475.00147557710318201413163
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2211246.0012461218153154
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2111081.001081104112121411
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................201940.0094093200350
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191611.0061125622912217725
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................241602.00602192781097106119
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................241493.00493221193778093
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231400.00400499311741253
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241311.003116074159216
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................211272.0027212218014244
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211254.002548600355380
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................231205.0020524294602464
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221164.0016452111302941
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241151.0015111314319101
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................201139.00139140377108
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201138.001381922183355
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201132.0013251141081831
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211125.0012525171173431
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201124.00124480016546
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211116.0011685104656
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221106.00106171110401513
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................25189.008926656739
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................24185.00852110131931
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................19185.00856237562
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23180.008045011888
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................23177.00772716461014
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................21174.00746720302
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................21172.00727207497
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................19169.00695501472
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20157.005732502117
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23148.00484138725
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19148.00484800000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22145.00454400010
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19142.004219510116
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.........................................................................................23133.003311103126
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20132.00321381343
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24132.003210004711
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT........................................................................................24128.00285000419
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..........................................................................................21127.00270160155
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................22126.00265001911
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..............................................................................................................................23122.00222110000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..........................................................................................22121.00210170121
................................................................................................................................................................................ATAAAGCTAGCTTACCGAA.............................................................................................19121.0021541353
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23119.00191900000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...............................................................................................................................24119.00191900000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATT................................................................................................................................21119.00191900000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................23118.00181021302
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18115.00151400010
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTA..........................................................................................21114.00140100310
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18114.0014420044
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18114.0014410711
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24112.0012300135
...........................................................................................................................................CTTTGGTTATCTAGCTGT...................................................................................................................................18110.00101000000
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19110.0010640000
droBip1
AATA---TAA-----------------TATAATAGTTCATTTGTGTTAAACACTTTCCTTTCCCTTTTTTTCAAACAATACTCCCACAAATCTT-------------------ATACAACACTATGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCAAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACTCA------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TT---------------------------------------------------------------------CA-GCAATG-----CCGAGTGTTACACAATCAACTCC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TT-----------------------------------------------------------CGCTTT----CG-ACAATT-----GCCAGTGTTACACAATCCCATCC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACGG-CC-AAAAAGGAAA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
T------------------------------------------------------------CCCTTT----CA-ACAATT-----CGCAGTGTTATATAATCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AAAAAGCCAACCCACGTTGCGTATACCGAACATT-------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATTAACAAAA--------------------------------GAGGAGACCACTTTCCTTTCCCTTT----CA-ACAATT-----CCAAGTGTTATATAACCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AGAAAGTAAACCCACGTTGCGTATACTTAACATAAA-------AA--SizeHit CountTotal NormTotal
No Reads
droBia1
TT---------------------------------------------------------------------CA-GCGGTT-----CCCAGTGTTATGCAATCGACTCC-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TT-----------------------------------------------------------CCCTTT----CA-GCAATT-----CACAGTGTTATATAATCGACTTT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAA-CC-GAAAAG-AAGCACACGTTGCGTATACTCAACGTGAAACAAAAAAGCASizeHit CountTotal NormTotal
No Reads
droEug1
TT-----------------------------------------------------------CCCTTT----CA-ACAATT-----CGCGGCGTTATGCAATCTACTAT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCA------------GCGAAACAG-CC-AAAAAGCAAGCCCACGTTGCGTATA----------------------SizeHit CountTotal NormTotal
No Reads
dm3
TT-----------------------------------------------------------CCCTTT----CA-ACCATC-----TGCAGTGTTACACAATCGACTCT---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCA------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................2211191976.001191976000080348361201881051799905000281017284583660065320120151254531142625154671097813536648521665195123198621898722189470003427180000000000000000000009273728820721987962946367536153024635911424163841261223130305932671651641027520816319312088101975761010634651916110328470776666529894610321752143135201227114141301387353764441036539010817522819513830021062041481000002221186030364366488903652592411613600164276313542252465307119015401530420439217186643589144045572055302691000010824901147055233388230736283541318347381100223961424254200014600414742984316328297412941035721176651481021020384035300122001312211422123857617373561562333982168011529952341481835820266684161116442091115249348117931175714202585442991655452663124121744152921724308602160911345056513953674574215344991142024354781700000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231620044.0062004400001596231329693513292485310010015880913280138602421292144464455971421170242925401036321041115141812872371075726000167121760000000000000000000101134796783185759900555162610641697501258310933916113689623133892106697925927462055646220140262164240375840672086211441882794163137391657671435116419521793556218813006111824300309203841736459411477769553899240917636000111550152181639484069973113135165061655054100786270992461010401400441918282662353203200134373003252011699870057413552191068839851101110101298325269621827311426300017011300290542024618149022666841155054263010277810100198811100150024013002006422076851586711395560222288826104896496623877969736541067574641822264799354998551257521549218010067475987652131313723240991227896146393645858469245492300512
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................211302390.0030239000002066006383730813505710475073542414680303564121485751611432701515214810547384161512226254857233384900058951315700000000000000000321226815779521343111720330393642396451120810361588371095513933604163987025621121744393072021566166464886834478297735298825259918837853001000015198330472396332452483113768641108530799129000100870130102731226006997208303059851405257721236912192662431107001183212974314916900012094470120000039720030072230153669116764356355210432249309677426100710030000570828890925158450327188728154138101110625103010020172310029779629686425210511906780240611624011384895099044070614343673579173698326593251434746722377472060237535443801301007311434541149207252145933902414278120010016
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................22131270.003127000001142274337141180920400342512401016186769865449416523212321118745102610500010000000000000000000000152063341838011001739762531483220931115152384147520813111273914960071324084179171361571283283512360000001000578138030925546441213413150000000010099511000753561827875174764217238513563318000069224329213150002200211000000161000000000079440256228371759447700001090080811780208312120003243300244000001632000000000400001714514841814118700100145359546047316682011395219051376782232702363081025142500100020000335130956094280171150000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................21126917.00269170000860258013050014001511400303017453223024422634124928231387100000000000000000000000000004149292130012932208144612262350971183005062310111102314137204710715117952761331220712000000000002744991592243231162433000003000005017580447483122734148352193899187128000004961491395160001170132000000030000000001510314515912517113200000000449359112128912002220252020100000195000000000050000171543615730189281190002310681300100212114879434743162883583133866206038160136303802000030020584214110332256364584211100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGATC.............................................................................................................................25119742.00197420000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108788859001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................22118350.001835000001000001110000200002460610000000023814161611048103214314106600000000000000000000000000014517725351304434988623124921201351022421001001971195611701733701817186156000000000016235064738415222219164250012000203200021149009010173712707208759000063141378211008059000000131500000000002398459211240000210027371319199436826002759892053100000253201000000010000433429250000223814813114314727872650105391029410310986140600211000000000009328415830563934000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................22116934.001693400003014242000021100009701012899273110148132001100005011210211000000000000000000000000000004813583140003830471701111910000050000620435264233113191324821260000000000363387862531710000808010000000000046215110284305148311643051161052125911772907000068175302000902700000030000000000617202001111000100000000206109032461001401170640000023000000000100000330314318018000035025047078431528437122690353111767074126002659030000200005501523622117154171165300000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................20115365.0015365000010001122402006000119830102206217193472861352144251103507525110002192200000000000000000000079526341001787922724352443207676641211290431117102752058112706218360117531441590015300000008132622025532560400000100000002943980209132922272342217752614312000012880222712000450162000002300000000073798521818234492363200002300128116177943002112196011000000340000010000500009401246113832900002778483436560182180189143126917311320474045881400213147000000000004721441658219402246324100000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................23113924.0013924000010326258176064000000615000676820416118776200110216041002321100000000000000000000000000023076939214731009152778815716352712144100111112212820293602711501352701421311000000000049208564308362123415102100000000000440585026812173492292241758330637646320800000138884451000370510000001200000000020803840117203323000012002562090422950007199065000002600000110001000041921012412100002206154239270248253310650123314147115767019320000102000012747219848613239000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2319160.0091600000510147375010000001133000000000000200020502130321000000000000000000000000000004511061041002517426695531164492828696320112333151312251575021502083618451581070000000010219291011212322100100000000000279233022801361226105114302708000001616110311000570360000000300000502072818101820135794115320000130017893021745001266880570000031000000000000000294207304260000229929418019111818424817508699521250029826900166240000000000025157634783173159179000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2418940.008940000012300815812400002000010000000000004011103020211112101000000000000000000000000000289472291468101074166192292874812625191041251981211539334918118147290700701313195100618756100000000005541013411002025100000000200000300292018600192044114615901691700003511176650002105300000076000000000322454067213125612100025280030823802954100095620500000018001000000000000511510713190000119614810281258366115780231219512344025229000162800000010000110387255571408480000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................1916934.006934000000000000001521960031141000972184867151131010113104110131010001162000000000000000000100201410246017224166131014231000101923302016213516190105605275511260110121500000922020301035220000001000000011815305899227920538013031702400000100201514000170680000000000000000515634312151828410000000025360233200005310703900000180000000000000001115151121100000124515919124480779577214268591500122221001281100000020000247694246759590141000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................2313520.0035200000000100212000000000140000000000000000100050007220000000000000000000000000000015119720000350203490300661100001112121314210110412032151844287830000001100371917200010301000000000001042380560023010103200000500400000020000000000000000012730001000000001190080450336200033180130000080000000000000001504170300000252010466177047153011901131650705900001000000000007261461577000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................2412413.0024130000310201150000010000100000000000000010101001001110000000000000000000000000000008424170012526841522132331812432211230312540601513130637080202200000000000714600010080000000000000005974049007440241230350000001528010300050700000011000000000073409214011250000162123006750081710004614013000001000000000000000004013327000018444383329813017039753980699100523000000000003710010723382818000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................2112161.002161000051000336500000000021000000000000000000114020001000000000000000000000000000003111000070110012220010030020000100052342201031529025220210000000000102000100240000000000000005178039001331027061010750000056421100040300000010000001000001831204221200001860052072600001644020000004000000000010000411362905000011441041271390662017241349031610010200000010000372866615253129000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATATC..............................................................................................................................2412122.00212200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379743000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................2311973.001973000021000110200000200011000040000000011001003000010100000000000000000000000000201122300010012111220432000103002400219160606944180712000000000044414020000800010000000000054650271031362404420741000000880071000206000000100000000003151111001410000001000013150413900008371069000002400000000001000041002023400001415847534447261708141124020280001010000020000312165421292927000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................2211581.001581000056158153980000000002100000000000000000001010000010000000000000000000000000000022112000208102241100108140000001114010012102062130521070000000000039500000130100000000000002726013506543394280192000003212200005050000000100000000002761500000300001712002428047000011901600000800000000000000001012113000006963284550741017028114263158510011200000000000341187221342629000000
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................2011522.00152200000000000100000000003000006365560110000000001000110100000000000000000000000000000301000010000000300310000000000101000000000102010000000000014727200000900010000000000022034006138081000000000705000060600000000000000000005500170001000000001349106190000813032000003200000001000000002011101000002830231772140970410007014190002100000010000371137728594134000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................2211359.00135900003101111300000100000300000000000000000000003000100000000000000000000000000000111000000012011010004300000100001030511203460717200000000003511120000009100000000000001131701700135030811311000008320111000106000000100000000002111110000000000021170023180350000121501000000800000000001000022130502000001918114571742111024321318005355001100000000000043766326764239000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2111322.0013220000200000000000000000000000402318100000000000000000000000001000000000000000000000000186000102002102016205001000002320003000011302110000000000004222001030400000000000000048050022102343031000008207200070300000000000000000114300100111000000004625019000043080000080000000000000000300030000000293311339816218905010018039520003200000010000501626415484430000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................2511296.00129600001100000100000000000000000000000000000000000000100000000000000000000000000000113183514155045321121218681415480141314262713540024032010117050144000000000006185000010300100000006000034380220061501802502800000097111000205000000300000000000254011316120000220018210370001147011000009000000000000000010102000000053262622163511100311044503033002000000000000016584814191416000000
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................2111234.00123400000000000000000000000300024312586100002000110100000010000000000000000000000000000000131100020400210300340000000000220300100000300020000000000003629300000200000000000000050060201084135420190000034010000002000000000000000000000112614120000220010767031000010608000001200000000000000003000011000001314981001158101020160950110000000000000329286945000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................2011210.0012100000110000000000010000150000100000110100000011000000000000000000000000000000000000000000000010010001004100000000000004600010206124000000000001100001007000000000000000932016001373711542570000027521300003000000000100000000007460000000000000000916071300005140700000300000000000000023084306000006277609321427170713104003440010310000000000032135805403624000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................2311182.0011820000202475311000000000130000000000000000000000000000000000000000000000000000000009126130000372233141017188000311111014507037100328140960000000000035710000000000000000000005352044002190613202310000014302000050100000000000000000004500010011000000004623062100011110800000400000000000000002220311000001119179148107281805030290111600110000000000001574203967000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2211145.0011450000001040000000000000110100132738003000001000000000000000221000000000000000000000015053262006822118407031936510000002983000630100260328400000000000870010000300000000000000043240230054632926015000000210040000102000000000000000000011221223210000030033240010000810300000000000000000000005120000000001393913414596030102401014000010000000000010281551193000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAATC...............................................................................................................................2311097.0010970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211989.0098900000000000000000000000000010243010000000000000001000000000000000000000000000000100000000000001000001200000000000000420100100000000000000000360000000300000000000000020940661432705361513000007200000020200000000000000000108700000000000000003402610002160600000200000000000000005012405000007244546771411100610111801817001300000000000051170401411147000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241754.007540000000000200000000000100007170000000000000000000001010000000000000000000000000000001020000000010000013120000000003000015010057100010000000000124700000080000000000000002542010583136131912728360000016200000000200000000000000000151100001000000010003709160000143002400000400000000000000000030402000001115141453266301110060123001030000000000013621126310000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTATC.......................................................................................241727.007270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000350377000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................211719.0071900000200101310000000000400000000001000000000000010000000000000000000000000000000000000004100010010000000000000001100300001100504300000000000000000000100000000000000026150120038030124018000000016000000000300000000000000000013200000000000000005001200001300000000000000000000000140013030000033474461790103901016078000000000000000042370140000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241575.005750000000100011000000000000000000000000000000000000000000000000000000000000000000002012110001140023140031000000000721000740002015061730000000000023200000000000000000000007603000402020100000020010000002000000000000000000010000102000000190123001130050000103050000010000000000000000000110000001943897200001012023001000000000000041130133000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................201543.00543000000000000000062000031000110000018000000000100000000000000000000000000000000000000000000010002000010200000000000000000000010000000000000000010000000100000000000000051401310410126340000011000000100000000000000000002574000000000000000011026100011409000002000000000000000000023010000032213059184212010020060010000000000000281441349177000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201542.005420000000000000000110000010000000000000000000000000020000000000000000000000000000000000000101000101000200000000000000013020200062105001100000000000000002000000000000000101606003306030900000090000000000000000000000000000120120000110000000020002200061805000003000000000000000000300000000014714182101016111250412001020000000000041181314878000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................211542.00542000053001102101000000000000000000000000000000000001000000000000000000000000000002000000031110030100237100000002000017300010002010600000000000000000000010000000000000026250100081006027039000000520000000200000000000000000000000000000000000000010401000002802000002000000000000000010301020000021151028672301900212306190000000000010000142852538000000
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................191509.00509000000000000000000000131000000000000000000002000000010000000000000000000000000000000000000200022100100000000000000001000010003120000000000000040100003000000000000000316091021333143040200000011020000000000000000000000000000103610210000000027703200000404000001000000000000000000001000000010748511530000001014000000000000000061152434000000
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................181458.00458000000000000000000000000000030390100001000000000000000000200000000000000000001000006100010300010000103000000000000303303001006487100120000000000000000000000000000000041501130290441605110000014120000000000000000000000000038400100000000000006604500001000000002000000000000000000000010000142162541866301600001503500101000000000100222024000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................201398.00398000000000200000000000014000000000000000000100000000000001171000000000000000000000100040001124125350027000000000002000400001000202200000000000130000001100000000100000031180150023412711501800000016000000010000000000000000000000100120101000000007100100001002000001000000000000000120300030000087915813300200004056000010000000000021641101000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................191389.00389000000000000000011000010000020100000000000010000000000000000000000000000000000000000000000100000000000000000000200100000000201100000000000000100000004000000000000000210010200122104000003202000000000000000000000000024500000000000010000102800008708000003000000000010000000000010000022283741115101020050420000000000000000117520381710100000
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................201350.00350000000000000000000000000000113661020000000000000000000000000000000000000000000000000000000000000000000000000000000006603015151000200000000000414000000000000000000000002436014427747121643100000300020000000000000000000000000001000000000000000000013000013010000000000000000000000300000000000623810011000000100000000000000000005741011000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................241346.00346000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000010000013000000000000103101001500032000000000000000000100000000000000000770500180203012000000910000000000000000000000000001002001121100000100030060000730000000200000000000000000000010000001510149113102020010012140000000000000000165032137913000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................231313.0031300000000001000000000000000000000000000010000000000000000000000000000000000000000000114000002017200000000000001000000311600000004116535000000000000410000000100000000000000440700000000000000001101000000000000000000000000000100010000000018400126012000022010000000000000000000000000000000000100591231000000802600000000000000000000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................231299.0029900000000000000000000000000000000000100000000000000000000000000000000000000000000054211001010010000000000000000000000073010100013013100000000000022100101050000000000000005308001202060620000082030000001000000010000000000000000000020000010020130303000128040000000000000000000000100000000000189793340080000407900000000000000005540001000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAA.............................................................................................191297.00297000000000000000020000000000011010100000000000000000000000000000000000000000000000000000000000000000000000000000000002050000000000000000000001100000000000000000000000330002001101430000000000000000000000000000000000000110000000000000000320000100010200000000000000000000000000000000009617201010010010202200000020000000001512863136000000
............................................................................................................................................TTTGGTTATCTAGCTGTATGATC.............................................................................................................................231293.002930000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153135000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................211292.0029200000000000000000000000000000000000000000011000000000000100000000000000000000000010050000000000000000000000000000000920104130000100000000006290000100000000000000000030270141071111402514920000027000000000000000000000000000001000100001000000001101000000100000002000000000000000000000120000031028200000000100200000000000000000130000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................241278.00278000000001100000000000010000010000000000000000000000000005440000000000000000000000041311001101120242425013422001000203300013800000000000000011000000002000000000000000330600230215041000004300000000100000001000000000010100011010000010006200300003104000001000000000000000002000000000074456830000100505120000000000000000727112663000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................231277.0027700000000000000000100001000000000000001000010000000000000000000000000000000000000000000000000001000001000000000000000000000000101000000000000100000000300000000000000031020014030201000000320000001000000000000000000003100000000000000300130414000013140100000050000000000100000001020100000137111623240401003025002111000000000012401521612000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGA..............................................................................................181235.00235000000000000000010000000000020001200000000000000000000000000000000000000000000010001000000000010000000000000000000002040000000210000000000000000000000000000000000000029000000002312000000000000000000000000000000000000110000000000000000010100000040000000100000000000000000000000000008111736600006000020210000000000000000055172053000000
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................191232.002320000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000011000100000000010001000000000000100000000000011030000010000000000000000100001801100004000000100000020100000001000000000006500000000000000001460100000000000000100000000000000001230000000002653163061020000404140010000000000000512951096000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTATC.......................................................................................251199.00199000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010198000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................201191.0019100000000010000000000000000000000000000000000000000000000000000000000000000000000000820000000000000010000000000110010300000000200000000000000140000000000000000000000002040001111200021000003200000000000000000000000000201100000000000000001260010000010000000000000000000000004011000000005314262433010100204300001000000000002752010000000
droSim2
TT---------------------------------------------------------------------CA-ACCATT-----TGCAGTGTTACACAACCGGCTCT---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231379049.0037904939411185541406661179819446218923479758566419010021390127754235193
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221162934.00162934159788255294608013104250200418952255518575205552148354101440
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21170900.0070900302091076365078383111232503079103712466488902288102
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................23146036.00460366510428535126130033241215701001
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................20114374.00143744403167844443137471638461423694216138164234
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2415310.005310933492146526500243995388381792374917
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2213103.00310312440176150523107316385251825016010
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................1812566.00256642311930534681153211163200121741
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2312401.002401104246734718800122394102311409000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2212212.0022123741259920039351159100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................2112186.002186157836323850010100000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................2312074.002074726183103520005342915900000
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................1911931.001931107334268686813431946886401029
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................2511649.0016494592694433300156268104040010101
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2111517.001517281919643174553456293451105000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................2411100.00110032416331446006181248112102000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................221918.009181364375931503323001200002
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241765.007651775441260012433603102010
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................231657.0065764105279621018219375020000
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................201627.00627420540175503240000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................211534.0053482145418072804201000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................221516.00516545461115178584124705000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................211480.0048024213265380000000300000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211399.003992188115900922800100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201366.0036628074390000000000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231335.003353138111067130102000
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211331.00331922925008231017705303001
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221300.003001302830350046141004300000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................241256.00256141871430031420100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGG...................................................................................................................................191247.00247149811600000000100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGC...................................................................................................................................191237.00237174441810000000000000
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201205.002050132000432313013700010
..........................................................................................................................................TCTTTGGTTATCTAGCT.....................................................................................................................................171165.0016500000003155000193993
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221143.0014318833000134010300000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................241133.00133361142323101890800000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................................................261132.00132413022300112590000000
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20193.0093623380004111811000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................24186.0086010000000207804010
..........................................................................................................................................TCTTTGGTTATCTAGCTGTG..................................................................................................................................20183.008318204320000000000000
..........................................................................................................................................TCTTTGGTTATCTAG.......................................................................................................................................15175.007500000022212320042514
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.............................................................................................................................25165.00651443800000340200000
..........................................................................................................................................TCTTTGGTTATCTAGCTGA...................................................................................................................................19161.00615010010000000000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24157.00572921410000010100000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................20154.0054530452520531100000
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19149.004910022111500000000000
..........................................................................................................................................TCTTTGGTTATCTAGC......................................................................................................................................16144.0044000000003910034618
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................19141.0041110352700000400000
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................19139.00391312152001230000000
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19138.0038004300011651800000
...............................................................................................................................................GGTTATCTAGCTGTATGA...............................................................................................................................18137.00372311000004132200000
............................................................................................................................................TTTGGTTATCTAGCTGTATT................................................................................................................................20136.0036000000000003600000
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19133.00330020001110144100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.............................................................................................................................25130.0030561300000310200000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGACA.............................................................................................................................25128.00281331000000000200000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23127.002776040003000700000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGCA..............................................................................................................................24125.002594910010000100000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23125.0025000000000002500000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23122.0022200200000000000000
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................21121.0021301110200000400000
..................................................................................................................................................TATCTAGCTGTATGA...............................................................................................................................15121.0021000000005151000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTC..................................................................................................................................20120.0020181000000010000000
................................................................................................................................................GTTATCTAGCTGTATGA...............................................................................................................................17120.002000000006770000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22119.0019000180000000001000
.................................................................................................................................................TTATCTAGCTGTATGA...............................................................................................................................16118.0018000000001431000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................................................22117.001795030000000000000
.................................................................................................................................................TTATCTAGCTGTATG................................................................................................................................15116.0016000000101122000000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGG...............................................................................................................................22115.0015101310000000000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................21115.001521131000121300000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGATA.............................................................................................................................25115.001551310001200200000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...............................................................................................................................23114.0014100000010001200000
............................................................................................................................................TTTGGTTATCTAGCTGTATGATC.............................................................................................................................23114.0014201100000000001000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTGG.................................................................................................................................21113.001363400000000000000
droSec2
TT-----------------------------------------------------------CCCTTT----CA-ACCATC-----TGCAGTGTTACAAAACCGGCTCT---ATATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------------------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221235175.00235175159954970813400535467
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231134949.001349491820717385899219436
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21133076.003307616283784840694876
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2219922.00992258262468571859
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2114781.004781266131413411860
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2213539.00353927812367591266
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2312709.0027092882111758452
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2011866.001866778527170391
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2411819.001819306373869271
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2211498.00149813591411312
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2111239.0012391086369720
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................2011197.0011971188252
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2311138.001138439277261161
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231837.008371146547233
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201749.007495939544107
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191672.0067227141120240
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211483.00483762035829
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................241441.004417810121250
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................251391.003913098163100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................221359.00359157894667
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211356.0035696995156
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................231253.00253271514170
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................201243.0024354711180
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221214.0021436468646
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241206.0020631514741
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201196.001966752293
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211190.0019015841477
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................231152.0015213249421
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................201145.001455749039
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221134.0013414296922
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................241131.001311679414
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................191130.001305811106
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................19197.00975751619
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23189.0089064439
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................21185.0085664132
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24163.0063853812
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19153.0053154286
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................21151.0051352122
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18148.0048102126
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19144.004443100
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20138.0038142202
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................24136.0036413316
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20136.003623283
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................22135.0035410318
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22132.003232000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................21126.00264868
...........................................................................................................................................CTTTGGTTATCTAGCTGTATT................................................................................................................................21124.002424000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT........................................................................................24122.002201129
................................................................................................................................................................................ATAAAGCTAGCTTACCGAA.............................................................................................19120.002002414
................................................................................................................................................................................ATAAAGCTAGCTTACCGA..............................................................................................18119.001902611
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................................................26118.001833102
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18118.001852101
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC........................................................................................23117.001700152
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.........................................................................................23116.00163814
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23115.001514001
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19114.00142291
..........................................................................................................................................TCTTTGGTTATCTAGCTGA...................................................................................................................................19114.00143047
...........................................................................................................................................CTTTGGTTATCTAGCTGT...................................................................................................................................18114.001414000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24112.001210011
.................................................................................................................................................................................TAAAGCTAGCTTACCGAA.............................................................................................18112.00120192
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................................................22112.00122406
.............................................................................................................................................TTGGTTATCTAGCTGTAT.................................................................................................................................18111.00119011
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23111.00115501
..........................................................................................................................................TCTTTGGTTATCTAGCTGTGA.................................................................................................................................21110.00100280
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAGA................................................................................................................................22210.002040142
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.............................................................................................................................2519.0091251
...................................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.........................................................................................2019.0092160
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...............................................................................................................................2419.0099000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.................................................................................................................................2219.0099000
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................................................2319.0099000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.............................................................................................................................2519.0091134
..........................................................................................................................................TCTTTGGTTATCTAGCTGTTG.................................................................................................................................2119.0092160
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTAA.............................................................................................................................2518.0082105
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..............................................................................................................................2318.0086110
droYak3
TT---------------------------------------------------------------------CA-ACCATC-----CGCAGTGTTACACAACCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACTG-CC-AAAAACAAAACCCACGTTGCGTATACTTA------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................232223497.0044699410306295693684402506725234070687723101009
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................222110485.0022097030542219012149045129405265801843772290
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21220153.0040306493413150124447682277383229000100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2026345.00126906876871087026911541691050
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2222988.505977191628177414891686132860000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2122576.505153663228593261985945370010
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2221715.0034300159275330821781091010
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2421544.00308822750019051585011512012100
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2321408.502817273583145985841951380000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2221394.502789323274191655140000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................2321336.002672200542552582850000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................2121301.5026033471224113820000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2221049.0020986115141777617420310000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................212953.001906116991493402210000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................232843.00168645075714572688302100
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................202537.00107411060413320000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................242468.0093694172532382636380000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................232359.0071876115134476520000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................222238.00476125435126129120000
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................192231.00462831658244657211030
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................242206.504136021298292210000
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................212206.504130110228553790010
..........................................................................................................................................TCTTTGGTTATCTAGCT.....................................................................................................................................172193.0038600000005713280
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................232185.0037005422228520410000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................222184.003682162526472250000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................252160.00320111369125623280000
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................202152.0030408361120512230000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................202134.002684341704724250000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..........................................................................................212113.502270022610000000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..........................................................................................222107.502150021500000000
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................21271.501430129930200000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................21264.50129018781413150000
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20263.501272298690010000
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18262.0012460531001131220
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................24259.5011901767808100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................24254.5010956271215260000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................21346.3313915571421423140000
..........................................................................................................................................TCTTTGGTTATCTAGC......................................................................................................................................16246.00920000000110810
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20238.00760432820210000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................21236.00724071930120000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................20236.00721173614760000
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................19235.0070145733740000
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19230.00600213070020000
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19228.5057050700000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24228.50576241750140000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................22225.0050047300000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................23223.0046029271430000
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23222.0044041210000000
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19218.50370111922300000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24216.003279703420000
...............................................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT..........................................................................................23214.5029012800000000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC........................................................................................23214.50290114110120000
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGC...........................................................................................20214.0028002800000000
............................................................................................................................................TTTGGTTATCTAGCTGTATT................................................................................................................................20213.5027020241000000
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18213.0026091240100000
..........................................................................................................................................TCTTTGGTTATCTAGCTGC...................................................................................................................................19312.67381901801000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23312.0036070351920000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................20212.002418102660000
droEre2
TT---------------------------------------------------------------------CA-ACCATC-----TGCAGTGTTACATAACCGACTCT-----ATACA-------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACAAAGCCCA---------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATG................................................................................................................................221235258.002352585063414529824026387622227323313
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...............................................................................................................................231145370.001453705827724265404711794284111848195
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................................................21149365.00493652722716123607702818380295
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..........................................................................................2117174.007174682420295268169538140
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.........................................................................................2217095.007095152027217697290132540
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATT................................................................................................................................2216564.00656434496125168873440
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...............................................................................................................................2314531.00453123722041636410087155
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGA...............................................................................................................................2214385.00438542782218273910
...........................................................................................................................................CTTTGGTTATCTAGCTGTATG................................................................................................................................2113455.00345532809517431010
..........................................................................................................................................TCTTTGGTTATCTAGCTGTA..................................................................................................................................2013216.0032161175927122315963650
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..........................................................................................2212257.002257303234601576668370
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..............................................................................................................................2412152.002152768106848258351712
...........................................................................................................................................CTTTGGTTATCTAGCTGTAT.................................................................................................................................2011881.00188118600015150
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.........................................................................................2311623.00162342068302012546500
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA........................................................................................231710.007106568148784050
..........................................................................................................................................TCTTTGGTTATCTAGCTGT...................................................................................................................................191573.00573249125111801070
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..............................................................................................................................241547.005472053029101381305
............................................................................................................................................TTTGGTTATCTAGCTGTATG................................................................................................................................201509.00509165927361671050
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................................................211397.003971381202861500
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...............................................................................................................................231397.0039726592952222090
............................................................................................................................................TTTGGTTATCTAGCTGTATGA...............................................................................................................................211357.0035720816102171310
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................................................251338.0033862115101011490
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...............................................................................................................................231319.003197728730221550
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATA................................................................................................................................221291.002918333143353750
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...........................................................................................201272.00272172582631570
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................................................211222.002221019430780
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAG............................................................................................201190.0019012101341420
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...........................................................................................211180.001801676379690
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGT...............................................................................................................................221177.00177175000020
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATC................................................................................................................................221175.001752212156925320
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA........................................................................................241165.0016515023338770
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAG............................................................................................191164.001646213151370
..........................................................................................................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................................................211152.001521270725110
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..............................................................................................................................241143.001435428042370
............................................................................................................................................TTTGGTTATCTAGCTGTAT.................................................................................................................................191122.001228127012200
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT........................................................................................231111.00111502818780
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.........................................................................................211100.0010089103250
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..............................................................................................................................24191.00913822416290
...........................................................................................................................................CTTTGGTTATCTAGCTGTA..................................................................................................................................19188.008886010010
.............................................................................................................................................TTGGTTATCTAGCTGTATG................................................................................................................................19186.008621111124280
.............................................................................................................................................TTGGTTATCTAGCTGTATGA...............................................................................................................................20178.0078478131180
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..............................................................................................................................24173.007317133223150
..................................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..........................................................................................20165.0065463132100
...........................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..............................................................................................................................23159.005956000300
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...............................................................................................................................23156.00562511314120
...........................................................................................................................................CTTTGGTTATCTAGCTGTATT................................................................................................................................21153.005352001000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTT..................................................................................................................................20148.0048282001080
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...............................................................................................................................24136.003636000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..............................................................................................................................24134.0034113115130
................................................................................................................................................................................ATAAAGCTAGCTTACCGAA.............................................................................................19130.003011115210
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..........................................................................................21130.003002102070
..............................................................................................................................................TGGTTATCTAGCTGTATG................................................................................................................................18126.002651022160
.........................................................................................................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................................................23122.002222000000
..........................................................................................................................................TCTTTGGTTATCTAGCTGTACT................................................................................................................................22122.002210218010
..........................................................................................................................................TCTTTGGTTATCTAGCTG....................................................................................................................................18122.002210100380
..............................................................................................................................................TGGTTATCTAGCTGTATGA...............................................................................................................................19121.00217211370
............................................................................................................................................TTTGGTTATCTAGCTGTATT................................................................................................................................20118.001810413000
................................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.........................................................................................23118.00183110580
.................................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.........................................................................................22118.00186000660

Generated: 10/20/2015 at 07:37 PM