ID:

dwi-mir-87-2

 Coordinate:

scf2_1100000004521:12250854-12250946 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.9 -35.8 -35.8

Flybase annnotation

utr3 [utr3_minus_970]; pre_miRNA [Dwil\mir-87-2-RM]; miRNA [Dwil\miR-87-2-RA]

No Repeatable elements found

mature

  1. dwi-mir-87-2  scf2_1100000004521:12250863-12250886 -
  2. dwi-mir-87-1  scf2_1100000004521:12257712-12257735 -
star

  1. dwi-mir-87-2  scf2_1100000004521:12250914-12250936 -
  2. dwi-mir-87-1  scf2_1100000004521:12257763-12257785 -

Sense Strand Reads

GTGTCCCAGTGTATCCTTGATGGTTCCAATCAAAATTAACATTTGGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATCGTTGGAATACCCCAAAGGAAGTGATGCAATACTGTGAA

*********************************************(((((((.(((((...((((((((.((.(((((.(((((((((.....))))..........))))).))))).))..))))))))...))))).)))..))))******************************************** 		Read size # Mismatch Hit Count Total Norm Total V118

embryo

 V119

head

 V117

male body		 M045

female body

 M020

head
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGA........................................................... 24 0 2 31909.00 63818 56747 4828 1525 679 39
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTG............................................................ 23 0 2 9495.00 18990 9461 8088 930 443 68
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGA........................................................... 23 0 2 1784.50 3569 3046 364 78 74 7
..............................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................. 22 0 2 1136.00 2272 597 841 575 225 34
...............................................................................................................TGAGCAAAATTTCAGGTGTGTG............................................................ 22 0 2 406.00 812 302 436 29 38 7
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGT........................................................... 24 1 2 336.00 672 228 324 96 22 2
............................................................TCGCGCCTGTATCTTGCTGAACC.............................................................................................................. 23 0 2 325.00 650 264 6 0 8 372
..............................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................. 21 0 2 314.00 628 103 433 41 31 20
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.......................................................... 25 1 2 143.00 286 244 20 4 18 0
..............................................................................................................TTGAGCAAAATTTCAGGCGTGTGA........................................................... 24 1 2 138.00 276 257 13 6 0 0
..............................................................................................................TTGAGCAAAATTTCAGGGGTGTGA........................................................... 24 1 2 83.00 166 141 18 7 0 0
............................................................TCGCGCCTGTATCTTGCTGAAC............................................................................................................... 22 0 2 68.50 137 52 1 1 5 78
..............................................................................................................TTGAGCAAAATTTCATGTGTGTGA........................................................... 24 1 2 64.50 129 122 5 2 0 0
..............................................................................................................TTTAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 60.50 121 113 7 1 0 0
..............................................................................................................TTGAGAAAAATTTCAGGTGTGTGA........................................................... 24 1 2 60.00 120 92 27 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTTA........................................................... 24 1 2 54.50 109 102 7 0 0 0
..............................................................................................................TTGATCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 53.50 107 102 4 1 0 0
..............................................................................................................TTGAGCAAAATTTAAGGTGTGTGA........................................................... 24 1 2 49.00 98 83 15 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGCGTGA........................................................... 24 1 2 48.00 96 85 7 3 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.......................................................... 25 1 2 46.50 93 67 15 6 4 1
..............................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................. 22 1 2 46.50 93 78 9 3 2 1
...............................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................. 21 0 2 41.00 82 16 28 14 24 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGCGA........................................................... 24 1 2 39.50 79 64 15 0 0 0
..............................................................................................................CTGAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 37.50 75 58 13 3 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGG........................................................... 24 1 2 35.50 71 55 6 1 2 7
..............................................................................................................TTGAGCAAAATTTCAGGCGTGTG............................................................ 23 1 2 35.00 70 38 30 2 0 0
.............................................................................................................CTTGAGCAAAATTTCAGGTGTGTGA........................................................... 25 1 2 33.50 67 62 5 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTTTGTGA........................................................... 24 1 2 33.50 67 61 4 1 1 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.......................................................... 24 1 2 33.00 66 55 3 0 7 1
..............................................................................................................TTGAGCAAAATTTCGGGTGTGTGA........................................................... 24 1 2 32.50 65 57 5 3 0 0
..............................................................................................................TTGAGCAAAATTCCAGGTGTGTGA........................................................... 24 1 2 31.50 63 57 4 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGT............................................................... 20 0 2 31.00 62 16 31 11 4 0
..............................................................................................................TCGAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 30.50 61 48 11 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGC........................................................... 24 1 2 30.00 60 19 39 0 0 2
..............................................................................................................TTGAGCAGAATTTCAGGTGTGTGA........................................................... 24 1 2 29.50 59 54 4 1 0 0
..............................................................................................................TTGAGCAAAATTTCGTGTGTGTGA........................................................... 24 2 2 27.00 54 47 5 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGTTGTGTGA........................................................... 24 1 2 27.00 54 47 4 2 0 1
..............................................................................................................TTGAGCAAAATCTCAGGTGTGTGA........................................................... 24 1 2 26.00 52 37 8 2 5 0
..............................................................................................................TTGAGCAAAGTTTCAGGTGTGTGA........................................................... 24 1 2 25.50 51 43 6 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTCTGTGA........................................................... 24 1 2 25.50 51 42 7 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGGAGTGTGA........................................................... 24 1 2 25.50 51 45 6 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTA............................................................ 23 1 2 25.00 50 27 19 3 1 0
..............................................................................................................TTGGGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 25.00 50 45 5 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTTTGA........................................................... 24 1 2 24.50 49 48 0 1 0 0
..............................................................................................................TTGAGTAAAATTTCAGGTGTGTGA........................................................... 24 1 2 24.50 49 44 5 0 0 0
..............................................................................................................TTGACCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 24.00 48 45 3 0 0 0
..............................................................................................................TTGAGCAAAATTTCCGGTGTGTGA........................................................... 24 1 2 23.00 46 36 8 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGGGGTGTG............................................................ 23 1 2 22.00 44 21 21 1 0 1
..............................................................................................................TTAAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 22.00 44 34 9 0 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTCTGA........................................................... 24 1 2 21.00 42 37 3 2 0 0
..............................................................................................................TTCAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 21.00 42 40 2 0 0 0
..............................................................................................................TTGAGCAAAACTTCAGGTGTGTGA........................................................... 24 1 2 21.00 42 31 10 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTATGA........................................................... 24 1 2 20.50 41 32 9 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTATGTGA........................................................... 24 1 2 20.50 41 33 8 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGATGTGTGA........................................................... 24 1 2 20.50 41 33 8 0 0 0
..............................................................................................................TTGAGCAAACTTTCAGGTGTGTGA........................................................... 24 1 2 19.00 38 37 1 0 0 0
..............................................................................................................TTGAACAAAATTTCAGGTGTGTGA........................................................... 24 1 2 19.00 38 27 11 0 0 0
...............................................................................................................TTAGCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 18.50 37 37 0 0 0 0
..............................................................................................................TTGAGCAAAATTTAAGGTGTGTG............................................................ 23 1 2 18.00 36 10 26 0 0 0
..............................................................................................................TTGAGAAAAATTTCAGGTGTGTG............................................................ 23 1 2 17.50 35 11 24 0 0 0
..............................................................................................................TTGAGCGAAATTTCAGGTGTGTGA........................................................... 24 1 2 17.50 35 30 3 2 0 0
..............................................................................................................TTGAGCAAGATTTCAGGTGTGTGA........................................................... 24 1 2 16.50 33 33 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGT........................................................... 23 1 2 16.50 33 12 16 4 1 0
..............................................................................................................CTGAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 16.00 32 9 22 1 0 0
..............................................................................................................TTGCGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 15.00 30 26 2 2 0 0
................................................................................................................GAGCAAAATTTCAGGTGTGTGA........................................................... 22 0 2 15.00 30 18 4 0 8 0
.............................................................................................................CTTGAGCAAAATTTCAGGTGTGTG............................................................ 24 1 2 14.50 29 17 9 0 3 0
..............................................................................................................TTGAGCAACATTTCAGGTGTGTGA........................................................... 24 1 2 14.00 28 23 3 2 0 0
..............................................................................................................TTGAGCAAAATTTTAGGTGTGTGA........................................................... 24 1 2 14.00 28 22 4 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGCTGTGTGA........................................................... 24 1 2 13.50 27 24 3 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGCGTG............................................................ 23 1 2 13.50 27 13 11 2 1 0
..............................................................................................................TTGAGCAAAATTTCAGGAGTGTG............................................................ 23 1 2 13.50 27 11 16 0 0 0
..............................................................................................................TTTAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 13.50 27 20 6 0 1 0
..............................................................................................................TTGAGCAAAATTTCGGGTGTGTG............................................................ 23 1 2 13.50 27 14 12 1 0 0
..............................................................................................................TTGAGCAAAATTTCAAGTGTGTGA........................................................... 24 1 2 13.00 26 19 5 1 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGCG............................................................ 23 1 2 13.00 26 12 13 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGGGTGA........................................................... 24 1 2 13.00 26 22 3 0 0 1
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTCA........................................................... 24 1 2 12.50 25 24 1 0 0 0
..............................................................................................................TTGAGCACAATTTCAGGTGTGTGA........................................................... 24 1 2 12.50 25 18 6 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTAA........................................................... 24 1 2 12.00 24 20 3 1 0 0
..............................................................................................................TTGATCAAAATTTCAGGTGTGTG............................................................ 23 1 2 11.50 23 16 6 0 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTC............................................................ 23 1 2 11.50 23 5 15 2 1 0
..............................................................................................................TTGAGCAAAATTTCATGTGTGTG............................................................ 23 1 2 11.00 22 16 6 0 0 0
..............................................................................................................TTGAGCAAAATTTCACGTGTGTGA........................................................... 24 1 2 11.00 22 19 2 1 0 0
..............................................................................................................TTGAGCAAAAATTCAGGTGTGTGA........................................................... 24 1 2 11.00 22 20 2 0 0 0
..............................................................................................................TTAAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 10.00 20 7 13 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTG................................................................ 19 0 2 10.00 20 3 2 0 1 14
..............................................................................................................TTGAGCAAAATTTCAGGTGTGGGA........................................................... 24 1 2 9.50 19 12 6 0 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTTTGTG............................................................ 23 1 2 9.50 19 10 9 0 0 0
..............................................................................................................TTGAGCAAAATTTCCGGTGTGTG............................................................ 23 1 2 9.50 19 8 11 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTTGA............................................................ 23 3 3 9.33 28 24 2 1 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTT............................................................ 23 1 2 9.00 18 11 6 1 0 0
..............................................................................................................ATGAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 9.00 18 9 9 0 0 0
................................................................................................................GAGCAAAATTTCAGGTGTGTG............................................................ 21 0 2 8.50 17 5 8 1 3 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTATG............................................................ 23 1 2 8.50 17 1 16 0 0 0
..............................................................................................................TTGAGCAAAGTTTCAGGTGTGTG............................................................ 23 1 2 8.00 16 9 7 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTATGTG............................................................ 23 1 2 8.00 16 4 12 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTTTG............................................................ 23 1 2 8.00 16 8 7 0 0 1
..............................................................................................................TTGGGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 8.00 16 8 8 0 0 0
.............................................................................................................GTTGAGCAAAATTTCAGGTGTGTG............................................................ 24 0 2 7.50 15 14 1 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.......................................................... 25 1 2 7.50 15 11 3 0 1 0
..............................................................................................................TTGAGCAAGATTTCAGGTGTGTG............................................................ 23 1 2 7.50 15 5 8 1 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAA......................................................... 26 1 2 7.50 15 12 2 0 1 0
..............................................................................................................TTGAGCAAAATCTCAGGTGTGTG............................................................ 23 1 2 7.00 14 9 5 0 0 0
..............................................................................................................TTGAGCCAAATTTCAGGTGTGTGA........................................................... 24 1 2 7.00 14 14 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGCTGTGTG............................................................ 23 1 2 7.00 14 13 1 0 0 0
..............................................................................................................GTGAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 7.00 14 6 8 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGAGTGA........................................................... 24 1 2 7.00 14 7 6 1 0 0
..............................................................................................................TTGAACAAAATTTCAGGTGTGTG............................................................ 23 1 2 7.00 14 5 8 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTCTG............................................................ 23 1 2 6.50 13 5 7 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGTTGTGTG............................................................ 23 1 2 6.50 13 8 5 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGA............................................................... 20 1 2 6.50 13 9 3 1 0 0
..............................................................................................................TTGAGCACAATTTCAGGTGTGTG............................................................ 23 1 2 6.50 13 3 10 0 0 0
.............................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA........................................................... 25 0 2 6.50 13 13 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCTGGTGTGTGA........................................................... 24 1 2 6.50 13 12 1 0 0 0
..............................................................................................................ATGAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 6.50 13 1 12 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGAGA........................................................... 24 1 2 6.50 13 10 3 0 0 0
..............................................................................................................TTGAGTAAAATTTCAGGTGTGTG............................................................ 23 1 2 6.00 12 6 5 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGATGTGTG............................................................ 23 1 2 6.00 12 1 11 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGAG............................................................ 23 1 2 6.00 12 0 11 1 0 0
..............................................................................................................TTGAGCGAAATTTCAGGTGTGTG............................................................ 23 1 2 6.00 12 9 3 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTCTGTG............................................................ 23 1 2 6.00 12 7 4 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................. 22 1 2 6.00 12 0 0 0 0 12
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTTGA.......................................................... 25 3 2 6.00 12 9 3 0 0 0
..............................................................................................................TTGAGCAAAATTCCAGGTGTGTG............................................................ 23 1 2 6.00 12 4 8 0 0 0
...............................................................................................................TTAGCAAAATTTCAGGTGTGTG............................................................ 22 1 2 6.00 12 5 6 0 1 0
..............................................................................................................TTGAGCAGAATTTCAGGTGTGTG............................................................ 23 1 2 6.00 12 8 4 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................. 20 0 2 5.50 11 2 6 0 2 1
............................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................ 21 0 2 5.50 11 1 2 1 4 3
..............................................................................................................TTGAGCAAAATTTTAGGTGTGTG............................................................ 23 1 2 5.50 11 4 7 0 0 0
..............................................................................................................TTGAGCAAAATTTGAGGTGTGTGA........................................................... 24 1 2 5.50 11 11 0 0 0 0
..............................................................................................................TTGACCAAAATTTCAGGTGTGTG............................................................ 23 1 2 5.50 11 7 3 1 0 0
..............................................................................................................TTGAGCAACATTTCAGGTGTGTG............................................................ 23 1 2 5.50 11 7 4 0 0 0
............................................................TCGCGCCTGTATCTTGCTGAACCG............................................................................................................. 24 0 2 5.50 11 8 0 0 1 2
..............................................................................................................TTGAGCAAACTTTCAGGTGTGTG............................................................ 23 1 2 5.00 10 5 5 0 0 0
............................................................TCGCGCCTGTATCTTGCTGA................................................................................................................. 20 0 2 5.00 10 1 2 0 0 7
..............................................................................................................TTGAGCAAAATTTCAAGTGTGTG............................................................ 23 1 2 5.00 10 4 6 0 0 0
..............................................................................................................TCGAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 5.00 10 3 7 0 0 0
..............................................................................................................TTCAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 4.50 9 5 3 1 0 0
..............................................................................................................TTGAGCAAAACTTCAGGTGTGTG............................................................ 23 1 2 4.50 9 4 4 1 0 0
...............................................................................................................TGAGAAAAATTTCAGGTGTGTGA........................................................... 23 1 2 4.50 9 8 0 1 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGCGTGA........................................................... 23 1 2 4.50 9 7 2 0 0 0
..............................................................................................................TGGAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 4.50 9 7 2 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGCGTGTGA........................................................... 23 1 2 4.00 8 6 2 0 0 0
...............................................................................................................TGAGCAAAATTTCGGGTGTGTGA........................................................... 23 1 2 4.00 8 8 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGCGTGT............................................................. 22 1 2 4.00 8 2 3 1 1 1
..............................................................................................................TTGAGCAAAATTACAGGTGTGTG............................................................ 23 1 2 4.00 8 2 6 0 0 0
..............................................................GCGCCTGTATCTTGCTGAACC.............................................................................................................. 21 0 2 4.00 8 3 0 0 1 4
...............................................................................................................TGAGCAAAATTTCAGGTTTGTGA........................................................... 23 1 2 4.00 8 8 0 0 0 0
..............................................................................................................TTGTGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 3.50 7 7 0 0 0 0
..............................................................................................................TTGAGCAAAATTACAGGTGTGTGA........................................................... 24 1 2 3.50 7 7 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTTA........................................................... 23 1 2 3.50 7 6 1 0 0 0
....................................................................................................................AAAATTTCAGGTGTGTGA........................................................... 18 0 2 3.50 7 3 1 0 3 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................. 21 1 2 3.50 7 6 1 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGAGTG............................................................ 23 1 2 3.50 7 2 4 1 0 0
..............................................................................................................TTGAGCATAATTTCAGGTGTGTGA........................................................... 24 1 2 3.50 7 5 2 0 0 0
..............................................................................................................TTGAGGAAAATTTCAGGTGTGTGA........................................................... 24 1 2 3.50 7 5 1 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGGGTG............................................................ 23 1 2 3.50 7 5 2 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.......................................................... 24 1 2 3.50 7 5 1 0 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................. 22 1 2 3.50 7 0 2 0 0 5
............................................................................................................TCTTGAGCAAAATTTCAGGTGTGTGA........................................................... 26 2 2 3.00 6 6 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGGGTGT............................................................. 22 1 2 3.00 6 1 3 1 0 1
..............................................................................................................TTGCGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 3.00 6 2 4 0 0 0
..............................................................................................................TTGAGCAAAATTTAAGGTGTGT............................................................. 22 1 2 3.00 6 1 5 0 0 0
...............................................................................................................TGAGCAAAATTTCAGTTGTGTGA........................................................... 23 1 2 3.00 6 6 0 0 0 0
............................................................TCTCGCCTGTATCTTGCTGAACC.............................................................................................................. 23 1 2 3.00 6 2 0 0 0 4
...............................................................................................................TGAGCAAAATTTCAGGTGTGCGA........................................................... 23 1 2 3.00 6 6 0 0 0 0
..............................................................................................................TTGATCAAAATTTCAGGTGTGT............................................................. 22 1 2 2.50 5 2 3 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGAAA......................................................... 25 1 2 2.50 5 5 0 0 0 0
..............................................................................................................TCGAGCAAAATTTCAGGTGTGT............................................................. 22 1 2 2.50 5 0 4 1 0 0
...............................................................................................................TGAGCAAAATTTCAGGGGTGTGA........................................................... 23 1 2 2.50 5 3 2 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGAGTGTGA........................................................... 23 1 2 2.50 5 4 1 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTG................................................................ 18 0 2 2.50 5 0 1 0 0 4
..............................................................................................................TTGAGCAAAATTCCAGGTGTGT............................................................. 22 1 2 2.50 5 1 3 1 0 0
.............................................................CGCGCCTGTATCTTGCTGAACC.............................................................................................................. 22 0 2 2.50 5 1 0 0 1 3
..............................................................................................................TTGAGCAATATTTCAGGTGTGTGA........................................................... 24 1 2 2.50 5 4 1 0 0 0
.............................................................................................................CTTGAGCAAAATTTCAGGTGTGT............................................................. 23 1 2 2.50 5 0 4 0 1 0
..............................................................................................................TTGAGCAAAAATTCAGGTGTGTG............................................................ 23 1 2 2.50 5 3 1 1 0 0
...............................................................................................................TGATCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 2.50 5 5 0 0 0 0
................................................................................................................TAGCAAAATTTCAGGTGTGTGA........................................................... 22 1 2 2.50 5 5 0 0 0 0
...............................................................................................................TGAGCAAAATTTCATGTGTGTGA........................................................... 23 1 2 2.50 5 5 0 0 0 0
...............................................................................................................TGAGCAAAATTTAAGGTGTGTGA........................................................... 23 1 2 2.00 4 2 2 0 0 0
..............................................................................................................TTGAGCAGAATTTCAGGTGTGT............................................................. 22 1 2 2.00 4 0 2 2 0 0
..............................................................................................................GTGAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 2.00 4 0 3 0 1 0
.................................................................................................................AGCAAAATTTCAGGTGTGTGA........................................................... 21 0 2 2.00 4 4 0 0 0 0
..............................................................................................................TTGAGCAAATTTTCAGGTGTGTGA........................................................... 24 1 2 2.00 4 1 2 1 0 0
..............................................................................................................TTGAGCAAATTTTCAGGTGTGTG............................................................ 23 1 2 2.00 4 2 2 0 0 0
..............................................................................................................TTGAGCAAAATTGCAGGTGTGTGA........................................................... 24 1 2 2.00 4 2 1 1 0 0
..............................................................................................................TTGAGCTAAATTTCAGGTGTGTGA........................................................... 24 1 2 2.00 4 4 0 0 0 0
..............................................................................................................TTGAGCATAATTTCAGGTGTGTG............................................................ 23 1 2 2.00 4 2 2 0 0 0
..............................................................................................................TTGAGCAAAATTTGAGGTGTGTG............................................................ 23 1 2 2.00 4 1 2 1 0 0
...............................................................................................................TTGACAAAATTTCAGGTGTGTGA........................................................... 23 3 2 2.00 4 4 0 0 0 0
..............................................................................................................TTGAGAAAAATTTCAGGTGTGT............................................................. 22 1 2 2.00 4 1 3 0 0 0
...............................................................................................................CGAGCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 2.00 4 3 1 0 0 0
..............................................................................................................TTGAGCAAAAGTTCAGGTGTGTGA........................................................... 24 1 2 2.00 4 4 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCGGGTGTGT............................................................. 22 1 2 2.00 4 0 0 3 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTCT............................................................. 22 1 2 2.00 4 3 1 0 0 0
..............................................................................................................TTGACCAAAATTTCAGGTGTGT............................................................. 22 1 2 2.00 4 0 4 0 0 0
..............................................................................................................TAGAGCAAAATTTCAGGTGTGTGA........................................................... 24 1 2 2.00 4 3 1 0 0 0
..............................................................................................................TTGAGCAAAATATCAGGTGTGTGA........................................................... 24 1 2 2.00 4 3 1 0 0 0
............................................................TCGCGCCTGTATCTTGCTGAACCT............................................................................................................. 24 1 2 2.00 4 0 0 0 0 4
...............................................................................................................TGAGCAAAATTTCAGGTGTGTAA........................................................... 23 1 2 2.00 4 2 2 0 0 0
...............................................................................................................CGAGCAAAATTTCAGGTGTGTG............................................................ 22 1 2 2.00 4 0 4 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTA............................................................ 22 1 2 1.50 3 2 0 0 1 0
..............................................................................................................TTGAGCAAAATTTCATGTGTGA............................................................. 22 2 2 1.50 3 3 0 0 0 0
................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................. 20 0 2 1.50 3 0 0 1 2 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.......................................................... 25 0 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTAT............................................................. 22 1 2 1.50 3 1 2 0 0 0
..............................................................................................................TTGAGCACAATTTCAGGTGTGT............................................................. 22 1 2 1.50 3 0 1 1 1 0
...............................................................................................................TGAGCAAAATTTCCGGTGTGTGA........................................................... 23 1 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAAATTCAGGTGTGT............................................................. 22 1 2 1.50 3 0 1 2 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTCTGT............................................................. 22 1 2 1.50 3 0 2 1 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGT............................................................... 19 0 2 1.50 3 0 3 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT......................................................... 26 2 2 1.50 3 2 1 0 0 0
..............................................................................................................CTGAGCAAAATTTCAGGTGTGT............................................................. 22 1 2 1.50 3 2 1 0 0 0
..............................................................................................................TTGAGCTAAATTTCAGGTGTGTG............................................................ 23 1 2 1.50 3 1 2 0 0 0
.............................................................TCCGCCTGTATCTTGCTGAACC.............................................................................................................. 22 2 2 1.50 3 0 0 0 0 3
..............................................................................................................TTGAGCAAAATATCAGGTGTGTG............................................................ 23 1 2 1.50 3 0 2 0 1 0
..............................................................................................................TTGAGCCAAATTTCAGGTGTGTG............................................................ 23 1 2 1.50 3 2 0 1 0 0
..............................................................................................................TTGAGCAAAATTTCAGTTGTGT............................................................. 22 1 2 1.50 3 2 1 0 0 0
............................................................TCGCGCCCGTATCTTGCTGAACC.............................................................................................................. 23 1 2 1.50 3 1 0 0 0 2
...............................................................................................................TGAGCAAAATTTCAGGTCTGTGA........................................................... 23 1 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCATGTGTGT............................................................. 22 1 2 1.50 3 2 1 0 0 0
..............................................................................................................TTGAGCAAAATTTCTGGTGTGTG............................................................ 23 1 2 1.50 3 0 3 0 0 0
..............................................................................................................TTGAGCAAAGTTTCAGGTGTGT............................................................. 22 1 2 1.50 3 1 1 1 0 0
...............................................................................................................TGAGCAGAATTTCAGGTGTGTGA........................................................... 23 1 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGTGTGTGA......................................................... 26 1 2 1.50 3 3 0 0 0 0
...............................................................................................................TGAGCAACATTTCAGGTGTGTGA........................................................... 23 1 2 1.50 3 2 1 0 0 0
............................................................TCGCGCCTGTATATTGCTGAACC.............................................................................................................. 23 1 2 1.50 3 1 0 0 0 2
..............................................................................................................TTGAGCAAAATTTCACGTGTGTG............................................................ 23 1 2 1.50 3 0 3 0 0 0
...............................................................................................................TGAGCAAAATTTAAGGTGTGTG............................................................ 22 1 2 1.50 3 0 3 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTTTGT............................................................. 22 1 2 1.50 3 1 0 0 0 2
..............................................................................................................CTGAGCAAAATTTCAGGTGTGTGT........................................................... 24 2 2 1.50 3 0 3 0 0 0
...............................................................................................................TGAGAAAAATTTCAGGTGTGTG............................................................ 22 1 2 1.50 3 0 3 0 0 0
..............................................................................................................TTGAGCAAAATTTCGTGTGTGTG............................................................ 23 2 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAATTTAAGGTGTGTGT........................................................... 24 2 2 1.50 3 2 1 0 0 0
...............................................................................................................TCAGCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAATCTCAGGTGTGTGT........................................................... 24 2 2 1.50 3 2 0 0 1 0
..............................................................................................................TTGAGCAAAATTTCAGGTGGTTGA........................................................... 24 2 2 1.50 3 3 0 0 0 0
..............................................................................................................TTGAGCAAAATGTCAGGTGTGTGA........................................................... 24 1 2 1.00 2 0 1 0 1 0
...............................................................................................................TGAACAAAATTTCAGGTGTGTG............................................................ 22 1 2 1.00 2 0 2 0 0 0
..............................................................................................................TTGATCAAAATTTCAGGCGTGTGA........................................................... 24 2 2 1.00 2 2 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTATGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
...............................................................................................................TGTGCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.......................................................... 24 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGGTTGTGA........................................................... 24 2 2 1.00 2 2 0 0 0 0
............................................................TCGCGCCTGTATCTTGCTG.................................................................................................................. 19 0 2 1.00 2 0 0 0 1 1
...............................................................................................................TGAGCAAAATCTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 1 1 0 0 0
..............................................................................................................TTGAGCAAAGCTTCAGGTGTGTGA........................................................... 24 2 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTAAGGTGTGA............................................................. 22 2 2 1.00 2 0 2 0 0 0
..............................................................................................................GTGAGCAAAATTTCAGGTGTGT............................................................. 22 1 2 1.00 2 0 2 0 0 0
...............................................................................................................TGCGCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
............................................................TCGCTCCTGTATCTTGCTGAACC.............................................................................................................. 23 1 2 1.00 2 2 0 0 0 0
.............................................................................................................ATTGAGCAAAATTTCAGGTGTGTGA........................................................... 25 1 2 1.00 2 0 0 0 2 0
...............................................................................................................TGAGCAAAATTTCAGGTGTCTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGACCAAAATTTCAGGTGTGTGT........................................................... 24 2 2 1.00 2 0 2 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGGGTGCG............................................................ 23 2 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTCCAGGTGTGTGT........................................................... 24 2 2 1.00 2 0 2 0 0 0
..............................................................................................................TGGAGCAAAATTTCAGGTGTGTG............................................................ 23 1 2 1.00 2 2 0 0 0 0
...............................................................................................................TTAGCAAAATTTCAGGTGTGT............................................................. 21 1 2 1.00 2 0 0 2 0 0
.............................................................................................................TCTGAGCAAAATTTCAGGTGTGTGA........................................................... 25 2 2 1.00 2 2 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTTTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTACAGGTGTGT............................................................. 22 1 2 1.00 2 0 1 0 1 0
..................................................................................................................GCAAAATTTCAGGTGTGTGA........................................................... 20 0 2 1.00 2 1 0 0 1 0
..............................................................................................................TTGATCAAAATTTCAGCTGTGTG............................................................ 23 2 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGTTGTG.............................................................. 21 1 2 1.00 2 0 2 0 0 0
...............................................................................................................TGAGCAAAATTACAGGTGTGTG............................................................ 22 1 2 1.00 2 0 0 0 2 0
............................................................TCACGCCTGTATCTTGCTGAACC.............................................................................................................. 23 1 2 1.00 2 1 0 0 0 1
..............................................................................................................TTGAGCAAAATTTCAGGTGCGT............................................................. 22 1 2 1.00 2 0 1 1 0 0
..............................................................................................................TTGAGTAAAATTTCAGGTGTGTTA........................................................... 24 2 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAGATTTCAGGTGTGT............................................................. 22 1 2 1.00 2 1 1 0 0 0
............................................................TCGCTCCTGTATCTTGCTGAAC............................................................................................................... 22 1 2 1.00 2 0 0 0 0 2
............................................................TCGCGCCTGTATCTTTCTGAACC.............................................................................................................. 23 1 2 1.00 2 1 0 0 0 1
...............................................................................................................TGAGCAAAATTTCAGGTGTGAGA........................................................... 23 1 2 1.00 2 0 2 0 0 0
............................................................TCTCGCCTGTATCTTCCTGAAC............................................................................................................... 22 2 2 1.00 2 0 0 0 0 2
..............................................................................................................TTGAGCAAACTTTCAGGCGTGTGA........................................................... 24 2 2 1.00 2 1 1 0 0 0
............................................................................................................TCTTGAGCAAAATTTCAGGTGTGTG............................................................ 25 2 2 1.00 2 1 1 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGCGTGA............................................................. 22 2 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGT................................................................. 18 0 2 1.00 2 2 0 0 0 0
...............................................................................................................TGACCAAAATTTCAGGTGTGTG............................................................ 22 1 2 1.00 2 0 2 0 0 0
............................................................TCGCGCCTGTATCTTGCTGG................................................................................................................. 20 1 2 1.00 2 0 0 0 0 2
...............................................................................................................TGAGCAAAATTTCAGGTTTGTGAA.......................................................... 24 2 2 1.00 2 2 0 0 0 0
..............................................................................................................TTCAGCAAAATTTCAGGTGTGT............................................................. 22 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTGGGT............................................................. 22 1 2 1.00 2 1 0 1 0 0
..............................................................................................................TTGAGCAAAATCTCAGGTGTG.............................................................. 21 1 2 1.00 2 0 2 0 0 0
...............................................................................................................TGAGCAAAATTTCGTGTGTGTGA........................................................... 23 2 2 1.00 2 1 1 0 0 0
...............................................................................................................TGAGGAAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGGGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
...............................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT......................................................... 25 2 2 1.00 2 2 0 0 0 0
.................................................................CCTGTATCTTGCTGAACC.............................................................................................................. 18 0 2 1.00 2 0 0 0 0 2
..............................................................................................................TTGAGCAAAATTTCAGGTCTGA............................................................. 22 2 2 1.00 2 1 0 0 1 0
................................................................................................................GAGCAAAATTTCAGGTGTG.............................................................. 19 0 2 1.00 2 0 1 0 1 0
..............................................................................................................ATGAGCAAAATTTCAGGTGTGT............................................................. 22 1 2 1.00 2 0 0 1 1 0
...............................................................................................................TGAGCAAATTTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAACAAAATTTCAGGTGTGT............................................................. 22 1 2 1.00 2 0 2 0 0 0
...............................................................................................................TGACCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGATCAAAATTTCAGGTGTG.............................................................. 21 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCAGGTATGT............................................................. 22 1 2 1.00 2 0 1 1 0 0
...............................................................................................................TGAGCGAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
...............................................................................................................TGGGCAAAATTTCAGGTGTGTGA........................................................... 23 1 2 1.00 2 2 0 0 0 0
..............................................................................................................TTGAGCAAAATTTCATGTGTGTGT........................................................... 24 2 3 1.00 3 2 1 0 0 0

Anti-sense strand reads

CACAGGGTCACATAGGAACTACCAAGGTTAGTTTTAATTGTAAACCGGCCGTATAAAGTAAGCGCGGACATAGAACGACTTGGCAATGGTTAACACTAGAAGTAAAGGCCAACTCGTTTTAAAGTCCACACACTCTTTAAACACTGCCATTGTAGCAACCTTATGGGGTTTCCTTCACTACGTTATGACACTT

********************************************(((((((.(((((...((((((((.((.(((((.(((((((((.....))))..........))))).))))).))..))))))))...))))).)))..))))********************************************* 		Read size # Mismatch Hit Count Total Norm Total M045

female body
........CGCATAGGAACTAACACGGTT.................................................................................................................................................................... 21 3 3 0.33 1 1
.......................................................................................................................................................GTTGCAACCTAATGGGGAT....................... 19 3 14 0.07 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004521:12250804-12250996 - dwi-mir-87-2 Known_mirbase GTGTCCC---AG----------------------T------------------------GT-ATCCTTGATGG-------------TT-CCAATC----AAAAT---TAACAT-TT-GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATCGTTGGAA---------TACCCCAAAGGAAGTGATGCAA-----------------TACTGTGAA
droVir3 scaffold_12723:3996221-3996374 + dvi-mir-87 Known_mirbase AG----------------------------TTCAT------------------------CT-T-----TCTGGTG----------------------------CT---ATCCCTTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAAT-TGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTATCATCATGACAA---------A-----AAAGAAAGT--------------------------------G
droMoj3 scaffold_6500:14729863-14729979 - dmo-mir-87 Known_mirbase T-----------------------------------------------------------------------------------------------------------ATCCT-TA--GCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAAT-TGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATC----------------------------------------------------------------
droGri2 scaffold_15252:3661306-3661473 - dgr-mir-87 Known_mirbase GGT--ATAG----T--------------CGAA--TTTGTGTAACTCTCTCTCTCTCACTCT-C-----TGTGGTG--------T-----------------------TATCCT-TG--ACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-TGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACT-------------------------------------------------------------
dp5 4_group3:220070-220212 + dps-mir-87 Known_mirbase CTT--CAAGC----------------------------------------------------------TCTGGTGCTTGGAGATTT-TCCTT-------GACATCCTA-CCGT-GT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCAT-AATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droPer2 scaffold_1:1694871-1695013 + dpe-mir-87 Known_mirbase CTT--CAAGC----------------------------------------------------------TCTGGTGCTTAGAGATTT-TCCTT-------GACATCCTA-CCGT-GT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCAT-AATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droAna3 scaffold_12916:13789779-13789917 - dan-mir-87 Known_mirbase GTG--CT---AG-T--------------GAAGCAT------------------------AG-ATTCTGG-----------------A-----TTTA-------AGTGAATCCT-TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCGA-TATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droBip1 scf7180000396535:753759-753975 - CAGTGCC---AG-T--------------ACAGCAT------------------------AC-AGTCTGG-----------------A-----TTTAAGT----GAAGAATCCT-TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAA-TGTGGCACACA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGATAGTTTGGAGTACA--A-TCGAGGTCCAGAAGTCCTGCTATGGTAAGAATACTATGAA
droKik1 scf7180000302677:173620-173755 + AT--------------------------GATTCAT------------------------AC-ATCCTTTGTGG-------------A-----ATTA-------TTATAATCCT-TC-GGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-TTGGGCCTACA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droFic1 scf7180000453838:152075-152205 - GTA-----------------------GTGATTCAT------------------------AC-A-----GTTGT--------------TCCCA-------------AAACTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAA-TATTGGCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droEle1 scf7180000491186:3004000-3004130 - TCT--AAATG---------------TGTGATTCAT------------------------CT-GGGCTAG---------------------------------------CTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCAT-ATTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droRho1 scf7180000779234:243624-243754 + GT--------------------------GATTCAT------------------------CT-GTGCTTAGTGG-------------A----------------CTACAGTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-ATTGGCCATCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------
droBia1 scf7180000301468:52266-52415 - GT--------------------------GACTCAT------------------------GT-ATCCTTGGTGT-------------AT-CCA-------------AAAATCC--TA--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAC-TTTGGCCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGA----------------------------------------------------------
droTak1 scf7180000415667:562540-562690 + GT--------------------------GATTCAT------------------------TT-ATCCTGAGTGA-------------AC-CTTACT----------TAA---AT-TA--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAC-TTTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGA----------------------------------------------------------
droEug1 scf7180000409554:4961876-4962044 + GTT--A----------------CTTGGTGGATTAT------------------------TT-GTCCTGACTAA-------------A----------------TTTAAGTCCT-TT--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-ATTGGCCCAAG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGAT---------TTCT-AA-AA-----------------------------------GGA
dm3 chr2L:9950424-9950556 - dme-mir-87 Known_mirbase GT--------------------------GATTCAT------------------------TTCGTCCTCGTTGA----------------------------CACCAAAGTCCT-TT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCAT-TATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGT----------------------------------------------------------------------------
droSim2 2l:9648423-9648576 - dsi-mir-87 Known_mirbase GTG--TT---AGATGATACTTAAATGGTGATTAAT------------------------TTCGTCCTGGCTGA----------------------------CACTTAAGTCCT-TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCAT-CATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGT----------------------------------------------------------------------------
droSec2 scaffold_3:5397100-5397280 - dse-mir-87 Known_mirbase GT--------------------------GATTCAT------------------------TTCGTCCTGGCTGA----------------------------CAACCAAGTCCT-TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCAT-CATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGAT---------TTAT-CA-GACTGGTGATCATT-----------------TCCGGTGAG
droYak3 2L:12640934-12641118 - dya-mir-87 Known_mirbase GT--------------------------GATTCAT------------------------TT-GTCCTGGTTGT-------------G----------------TCCAAGTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAAT-TATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGAT---------TTGC-AA-AGTTGGTAAAGCAATGCGGCTTG-----------GGTGGA
droEre2 scaffold_4929:10570552-10570702 - der-mir-87 Known_mirbase GTG--CT---AG-TGATACCTACTTGGTGATTCAT------------------------TT-GTCCTTGCTGA-------------A----------------CACGAGTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAT-TATGGCCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GTGTCCC---AG----------------------T------------------------GT-ATCCTTGATGG-------------TT-CCAATC----AAAAT---TAACAT-TT-GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATCGTTGGAA---------TACCCCAAAGGAAGTGATGCAA-----------------TACTGTGAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................24231909.0063818396791525567474828
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2329495.00189906844393094618088
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2321784.503569774783046364
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2221136.00227234225575597841
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................222406.0081273829302436
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................242336.0067222296228324
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................232325.00650372802646
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................212314.00628203141103433
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................252143.00286018424420
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22268.501377851521
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25246.50931466715
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22246.5093123789
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................21241.0082024141628
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24235.5071721556
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24233.0066170553
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................20231.006204111631
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24230.00602001939
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................23225.00500132719
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23216.50330141216
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................22215.0030080184
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................23211.5023012515
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................19210.0020141032
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA......................................................................................2339.3328011242
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................2329.0018001116
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2128.501703158
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG......................................................................................2427.5015000141
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2527.5015010113
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA.........................................................................................2026.501300193
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2526.5013000130
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................2226.0012120000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTGA....................................................................................2526.001200093
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................2025.501112026
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2125.501134112
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG........................................................................................................................................2425.501121080
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................2025.001070012
.......................................................................................................................................GCGCCTGTATCTTGCTGAACC.........................................................................................................................................2124.00841030
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1823.50703031
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................2123.50700061
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................2423.50701051
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................2223.50750002
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................................1822.50540001
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2222.50531010
...........................................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA.....................................................................................2122.00400040
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCT........................................................................................................................................2422.00440000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTA......................................................................................2221.50301020
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................................2021.50302100
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................2521.50300030
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1921.50300003
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2621.50300021
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2421.00200020
.....................................................................................................................................TCGCGCCTGTATCTTGCTG.............................................................................................................................................1921.00211000
............................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................................2021.00201010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................................1821.00200020
.....................................................................................................................................TCGCGCCTGTATCTTGCTGG............................................................................................................................................2021.00220000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2521.00200020
..........................................................................................................................................CCTGTATCTTGCTGAACC.........................................................................................................................................1821.00220000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTG........................................................................................1921.00201001
droVir3
AG----------------------------TTCAT------------------------CT-T-----TCTGGTG----------------------------CT---ATCCCTTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAAT-TGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTATCATCATGACAA---------A-----AAAGAAAGT--------------------------------GSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................24110939.00109392627262761712150000803366170522267396532368991168362010440900041028000000000000100001252563524314701211100002010021
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2216139.00613943333054514600400003342281633783131994271475541211201210330500014330000000000000000001137659237902200000200000001
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2315191.005191613168170213420000004152077330721118062074384513220882209000072600000000000000101619749281159200000000000002300
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2311717.0017172457791300000000152693212757680621781202071560100020500000000000000000034397727400000000100000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211710.007102114930011100000023231541362212730323103115030000040000000000000010005296626800000001100000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221559.0055904358020000000054352033362024262000202513030000101000000000000000001572810000010001000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241472.004720011201100100003016634112202532000101000000000010000000000000000002313620800000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211341.0034112531010000000016111724249122290101013240100000100000000000000000004427000000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................231281.002814710324800000000002110000000000000000000000000000000000713200091010001034431114101056
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201106.00106005001000000003114410670000000000000000000000000000000000000136000000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22195.0095104226000000000011111302100000000000000000000000000001000000810100011000022103210
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25169.0069016600000000001130536044000000000000000010000000000000000001441000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23164.0064003500000000003114100190000000010100000000000000000000000001151800000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23149.004900010000010000230631035000001000000000010000000000000000000261400000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25148.004801220000000000622130013000000000000000000000000000000000000312100000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................22138.003856018000000000000000000000000000000000000000000000000000000004500000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24135.00351115000000000091121202200000010000000000000000000000000000030300000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................20131.003181610000000000000001000000000000000000000000000000000000000000000000010000001003
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................24125.00250013000000000042030200200000000000000000000000000000000000051200000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24122.00221431010000000000000000100000000000000000000000000000000000062200000000100000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................19118.001821000000000000000100000000000000000000000000000000000000000300000000001001000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22118.001800100000000000100201012000000000000000000000000000000000000001000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................23117.00170013000000000000010000200000000000000000000000000000000000020800000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24117.00170001000000000020010000100000000000000000000000000000000000073200000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................22116.00166310000000000000000000000000000000000000000000000000000000001500000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20115.00152135000000000010000002000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................22111.00110021000000000010000000000000000000000000000000000000000000031300000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................25110.00100020000000000011000200000000000000000000000000000000000000000400000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2118.0080400000000000000011000100000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2317.0070200000000000000000000000000000000000000000000000000000000201200000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2417.0070010000000000010001000100000000000000000000000000000000000001200000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2317.0070003000000000000000000000000010000000000000000000000000000000300000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................2216.0060000000000000000000001000000000000000000000000000000000000021200000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGG............................................................................................................................................2016.0064200000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2116.0060050000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................2315.0050100000000000010000000000000000000000000000000000000000000011100000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................................1814.0040000000000000010010001000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1814.0040030000000000000010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2513.0030003000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................2513.0030000000000000010000100000000000000000000000000000000000000010000000000000000000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTG........................................................................................2213.0030020000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2213.0030111000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................2412.0020000000000000001000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGC.........................................................................................2012.0021000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAA..........................................................................................................................................2212.0021100000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAAAATTTCAGGTGTGTGA.....................................................................................1912.0020001000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT........................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000200000000000000000
droMoj3
T-----------------------------------------------------------------------------------------------------------ATCCT-TA--GCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAAT-TGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATC----------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2418070.008070469222114425429342048
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2213515.003515615852774463181774
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2311777.0017772072906677336801
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2311079.0010791292993151330239
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211548.0054877252841173204
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................231415.00415021023911
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211217.002177941432781
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241211.002111918111626121
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221202.00202522311202868
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201104.001041131214064
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................221101.001010003953
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22189.00893503771
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25162.006213715288
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25139.00395012247
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24138.00382510273
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23135.003580110115
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20125.00253031162
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24121.0021142086
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................23121.00212103213
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22118.0018420075
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24117.0017190070
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23114.0014202154
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................18111.0011110090
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................22110.0010500041
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................2418.008301031
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................1917.007101050
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................2317.007000034
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................................2017.007600010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2416.006300102
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................2015.005001220
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2315.005010022
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2514.004100030
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGC.......................................................................................2114.004001030
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................2514.004001003
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1913.003111000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2113.003010110
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................2613.003001020
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTA........................................................................................2113.003000030
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT........................................................................................2113.003000021
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................2313.003000030
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2513.003010020
............................................................................................................................................................GT-TACAAT-TGTCACATCCAAATCCGG.............................................................................................................2612.002000020
.......................................................................................................................................GCGCCTGTATCTTGCTGAACC.........................................................................................................................................2112.002010010
............................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................................2012.002000020
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................................1812.002000011
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2212.002000020
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2512.002100010
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTG........................................................................................1912.002200000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2112.002100001
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGCT....................................................................................2511.001001000
...........................................................................................................................................................................................AGCAAAATTTCAGGTGTGT.......................................................................................1911.001100000
droGri2
GGT--ATAG----T--------------CGAA--TTTGTGTAACTCTCTCTCTCTCACTCT-C-----TGTGGTG--------T-----------------------TATCCT-TG--ACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-TGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACT-------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................241605.00605135470
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................221329.0032999230
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................231190.0019046144
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................23166.00662442
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................21160.00601545
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................21122.0022157
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................22116.0016106
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................2517.00743
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................2517.00743
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................2415.00514
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................2414.00422
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................2213.00303
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................2013.00303
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................2312.00202
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................2212.00220
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................2312.00202
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1812.00220
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................................2012.00220
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2212.00211
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................2312.00202
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2311.00101
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................2411.00101
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................2011.00110
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................2111.00101
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................1911.00101
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1911.00110
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT.......................................................................................2311.00110
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTATT....................................................................................2411.00110
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2411.00110
dp5
CTT--CAAGC----------------------------------------------------------TCTGGTGCTTGGAGATTT-TCCTT-------GACATCCTA-CCGT-GT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCAT-AATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2419361.0093610127120019629985172413221528
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2213077.0030771926202811402351490110
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2312590.002590051125866536213993418
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2311714.00171403732641957193390220
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................2111130.00113022789414133104498061
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221352.0035201252064930121010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241287.002870671553022148000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211221.0022111105422079000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201181.00181031201011127000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................22188.0088025826011000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25183.008303420010116101
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................23179.0079014501710213
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23162.0062016242434000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22161.006113173335134
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20150.0050026611412000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23146.0046121201021000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24142.0042017110437000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24124.002400251133000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................22123.002301820102000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24120.00200060806000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22119.00190360109000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25117.00170230318000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................24114.00140531410000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................23110.00100421102000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................19110.00100640000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................2419.0090310113000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2119.0090900000000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................................2018.0080600002000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2417.0070511000000
......................................................................................................................................CGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2117.0070700000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2517.0070150001000
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2217.0070160000000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2517.0070311200000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................2517.0070021202000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1916.0060201021000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG......................................................................................2416.0060200301000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2115.0050400001000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................2515.0050110003000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................2214.0040300100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2314.0040040000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................2014.0040200002000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2414.0040120001000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGC.......................................................................................2113.0030021000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG........................................................................................................................................2413.0030100010010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................2313.0030000021000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT........................................................................................2112.0020200000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................2612.0020100001000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGAA....................................................................................2612.0020110000000
......................................................................................................................................CGCGCCTGTATCTTGCTGAA...........................................................................................................................................2012.0020200000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2612.0020100001000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2312.0020000110000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTC......................................................................................2212.0020010010000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................2212.0020100010000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................................1812.0020100010000
.....................................................................................................................................TCGCGCCTGTATCTTGCTG.............................................................................................................................................1912.0020100000010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTA........................................................................................2112.0020020000000
...........................................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA.....................................................................................2112.0020100100000
.............................................................................................................................................................................................CAAAATTTCAGGTGTGTT......................................................................................1811.0010100000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTA....................................................................................2411.0010100000000
droPer2
CTT--CAAGC----------------------------------------------------------TCTGGTGCTTAGAGATTT-TCCTT-------GACATCCTA-CCGT-GT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCAT-AATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2414037.004037181545663608082131
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2212186.002186811440221868935
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2311238.001238763193123220632
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................231842.0084283224121
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................231725.0072564013053202294
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211550.005504445068167217
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241289.002890392170186
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................221190.0019018510130
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221180.0018011426204673
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211115.00115081115243
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201113.00113060145835
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................22177.00777511000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25146.004632312017
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23142.00420325725
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG........................................................................................................................................24125.00252500000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24123.0023232565
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25117.0017120248
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................19113.0013800140
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20113.0013221035
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................21111.0011820100
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23110.0010011053
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22110.0010000145
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................2419.009011016
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................2419.009700011
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................2219.009000144
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................2418.008101042
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................2417.007000151
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................2215.005032000
........................................................................................................................................CGCCTGTATCTTGCTGAACC.........................................................................................................................................2015.005500000
.........................................................................................................................................GCCTGTATCTTGCTGAACC.........................................................................................................................................1914.004400000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2314.004111010
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................2014.004300010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................2413.003000003
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................2513.003010002
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2413.003010020
........................................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................................1813.003000210
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................................1812.002200000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT...................................................................................2512.002100001
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTC.....................................................................................2412.002001010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2412.002100100
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAA..........................................................................................................................................2212.002010001
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................2312.002001100
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................2312.002000011
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCC........................................................................................................................................2412.002200000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................2612.002200000
......................................................................................................................................CGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2112.002020000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT.......................................................................................2312.002000002
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................2212.002000011
....................................................................................................................................TTCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2411.001100000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG......................................................................................2411.001001000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCGT-......................................................................................................................................2511.001100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2311.001000100
.....................................................................................................................................TCGCGCCTGTATCTTGCTGG............................................................................................................................................2011.001100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA......................................................................................2331.003000003
......................................................................................................................................CGCGCCTGTATCTTGCTGAA...........................................................................................................................................2011.001010000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGG.......................................................................................2111.001100000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA...................................................................................2511.001000010
............................................................................................................................................................................................GCAAAATTTCAGGTGTGT.......................................................................................1811.001000010
droAna3
GTG--CT---AG-T--------------GAAGCAT------------------------AG-ATTCTGG-----------------A-----TTTA-------AGTGAATCCT-TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCGA-TATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2417304.00730470052040432123672992
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2313217.00321725610114712310941496
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2212325.002325236214186898980
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................231757.00757106594829126389
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241653.00653308527252331
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211584.005847513430170292
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221302.00302366141256178
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211129.00129150093471
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201124.0012441393968
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25162.00621611211814
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23158.005860061432
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................23158.005829270101
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22157.005739110412
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25142.004273231413
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23134.003431521013
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24128.00281030096
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20125.00255100415
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24122.0022603076
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24119.0019121492
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................25115.0015100176
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22113.0013100048
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................20111.0011800003
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................22110.0010070111
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2218.008610001
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2118.008600101
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1916.006100113
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................2216.006100005
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................2215.005201002
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT........................................................................................2115.005000122
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................1915.005010004
......................................................................................................................................CGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2115.005500000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................2414.004310000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................2314.004010021
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2313.003010020
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTA........................................................................................2113.003000012
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2513.003020001
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................2413.003000003
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2113.003200001
............................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................................2013.003110100
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2412.002020000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGC.........................................................................................2012.002010001
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................2612.002010010
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1812.002110000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATTT..................................................................................2712.002000020
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT...................................................................................2612.002000011
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................2412.002000101
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................2211.001000100
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAT...........................................................................................................................................2111.001000001
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGGA....................................................................................2511.001010000
...........................................................................................................................................................................................AGCAAAATTTCAGGTGTGT.......................................................................................1911.001100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTCT.....................................................................................2411.001000100
droBip1
CAGTGCC---AG-T--------------ACAGCAT------------------------AC-AGTCTGG-----------------A-----TTTAAGT----GAAGAATCCT-TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAA-TGTGGCACACA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGATAGTTTGGAGTACA--A-TCGAGGTCCAGAAGTCCTGCTATGGTAAGAATACTATGAASizeHit CountTotal NormTotal
No Reads
droKik1
AT--------------------------GATTCAT------------------------AC-ATCCTTTGTGG-------------A-----ATTA-------TTATAATCCT-TC-GGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-TTGGGCCTACA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GTA-----------------------GTGATTCAT------------------------AC-A-----GTTGT--------------TCCCA-------------AAACTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAA-TATTGGCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCT--AAATG---------------TGTGATTCAT------------------------CT-GGGCTAG---------------------------------------CTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCAT-ATTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GT--------------------------GATTCAT------------------------CT-GTGCTTAGTGG-------------A----------------CTACAGTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-ATTGGCCATCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GT--------------------------GACTCAT------------------------GT-ATCCTTGGTGT-------------AT-CCA-------------AAAATCC--TA--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAC-TTTGGCCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGA----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GT--------------------------GATTCAT------------------------TT-ATCCTGAGTGA-------------AC-CTTACT----------TAA---AT-TA--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAC-TTTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGA----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTT--A----------------CTTGGTGGATTAT------------------------TT-GTCCTGACTAA-------------A----------------TTTAAGTCCT-TT--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAT-ATTGGCCCAAG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGAT---------TTCT-AA-AA-----------------------------------GGASizeHit CountTotal NormTotal
No Reads
dm3
GT--------------------------GATTCAT------------------------TTCGTCCTCGTTGA----------------------------CACCAAAGTCCT-TT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCAT-TATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................241181065.001810650000000001000000002038466150016309172623673212729981254244053283287157968222745214648647627941291100001541814800000000000000000000032154495200042934132201251917942485128125197794190000004916193290361311015838311131004604127101437800009257701917171910187595191664115948862218561021388000002001565776070444204842018275104008464803006709431523526310639181649992882570500213591991699473133465161154311663124960460636129897542764768123627100043010001992129115542621220196522315061130111628100001015010601072650572116217915552931747251220412111389953140038123334389623479282149651054921602383943690246411174310608267252133401241212674936841761138299534262338351521412
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................23156653.00566530000000000000000000031032310911220878993308643843127126213114354102325015125196152965172600073862300000000000000000000018007500003204325116261232529165128412000000564480534360150562428626400000000004213262181001441021877607551754002571010000010011034756042031110688223436455600514014103761302432667443711520400000176332010654702145213322462871006734533566130339146175200100006784620182250500141716303070801110420000000300220008153752226115201878100362376755288432338894363659721674553204215201614165801383143152212300018010151560663579871401535782141227060
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................22142109.00421090000000000000000000053164709142321571381201630633102139682142141843948254570004030600000000000000000000020200210064214402462912511132464342140000007241806041171801693504456738000000000000700252226271231633068641800000600760209214012412271733179416802261100070652831314820248554430000091298270001712576551514513133107270401067581000100012911307533114001344238032300000696000010040001000122812221102822446296112000191622291731234222115262133010398117313291193004019351318011565542880340000200215226458225445574711531003404048
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................23130963.003096300003000010000000010611190004707671882014217722605844761211818746582497803971723000298080000000000000000000004310029292021325621261914407115314605772141675450000103314171980142355302202327110416439180000002220455803811641133183979825313253000000007001381690951011997768114114031140040234850451401862213865780000023235403241019251725647101231114473786315966797933621059200331229085660000271480119070004540000030400100001126167213121149306164000280408266334684779742499262282697691897860700647007941144253103000011003021014519157509480334020030
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................2216652.0066520000000000000000000011681030031126101657714101615383294112211896220001013100000000000000000000080013000322229022696751010372417000000912120300300000101022000000000010111015101113721055552450000000050046030108112340910005007111517565731512000001652050007514221291728812814220000000049530325310008436062030002180000010100000004280017783100015615012517563031278201928606936102032720063723200000001000140503373102389356194001020
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................2116563.00656300000000000000000000416710420202422121115465112035234250789415000343750000000000000000000002000000011231018314122113920000001101000160204270300300000000003120095106363231688000009002009170100002602432002010130071210131700010011800000800010004231916381453418519350260001100016340467720008942077030001440000000000000001096012265262200022021719728408839260161952217241011014000254441101000100102451084633109289265199012110
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................2415752.0057520000000000000000000010560020000000002818612635118390451583320000000000000000000000000001200010001034010353254034469000000000100135020127010116000000000000000513616342672727300000000000121101600115114280830000045411140002211600000261000000020851121441231132931100000000111102835000064170300200018510000001000000010690111203422100010014093112285813703223941031252031118400165122401000000100020195642887121276164200010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................2511769.00176900000000000000000000006000000000000140002670120101127100000000000000000000000000001000000000040110417102330000000000020007402011202022000000000000000020164414200000000000171509000110304060000001712800001400000015000000010012601020432616224788600001810004202600002320600000140000000000000004232428414000001631282912518806164546510422300103319000000010002174459132010001010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................2511672.0016720000000000000000000002200000000000003111034042321119000000000000000000000000000000000000001210042841221500000002004000110000020503500000200000000001152119690000000000015220120019111011030000002022400020200000050000000000012121815113011015412541000188008502000002010701000800000002000000064501210215000001524815011260261382451024064260096715000000000001544188131112000010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................2111597.00159700000000000000000000004001000000000010200330300111600000780000000000000000000000200000002379001932500313438000000002000000000001020610000000000000000000410002000000000100390200313070704000000712010001020000001100000003155431100010100010000110560000151402100000280000100000000005120101272000092898511311214120252601112065620041410000000000482627013193727000010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................2411452.00145200000100000000000000012000000000000050430450720333151100000000000000000000000000020000000124711421426032520462000000402110401000012301001000000000000000151852211530000000000010409000100603040000000010101000100000002130110001003280134928549488133100015200840310000131070000060000000000000004302311262210000915864101312311113871319036190039841000000000000414421256000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2211231.0012310000010000000000000000510010000000014020002020100314300000000000000000000000000001000000000000047310217900000006004000000000000101100000011000000000014216121000000000002401000302022400000020301000000000000101000000000403611376607559191174900000000111002000001001000002000000000000000129804104715880000010010402006164111003500225414000000000001501341000009
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................2311046.00104600000000000000000000001500000000000030021214071121028000000000000000000000000000008000000000127101327200133800000020000001000002001043000000000000000220351101100000000200040100000101030000000011000001100000020000000100403012101001000000003007500007706000002700000001000000001501111400000292123260161170761702560393500651330000000000034184636193322000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201958.009580000000000000000000000400030008100000202013103000104010001011300000000000000000000010010100000300210022200000000100001000000000001200000000000000003040550121000000000003202002120917013000000311000000000000002000010011175600401120000000000200510100061101000000100000000000000003171101230000042373764011920506104101212003230000000000055224591171818000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAATC..................................................................................271820.008200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612208000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................241711.007110000000000000000000010400000000000012021115341113037169720000000000000000000000000000000010000001002000000200000000000003128010010060930000000000000001004610456000000000003300000000000000000000001000001300000103000000012111132613000000000011027100021010000020000000000000001370014130000043092100711002277139014180068200000000000815821065000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................231660.00660000010000400000100000001000100000000003000200010035100000000000000000000000000000000000000020043120077000000000060501000010201000000000000000000011100169200000000000320201010201204000000402100000000000060000100000484213343844228822450000000016120400000100201000000000001000000022301112217000000100050000415496021007224000000000002542201000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATC...................................................................................261615.006150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000457155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................241605.006050000000000000000000000500000000000000000002030101040000000000000000000000000000000001000021910235151022392000000200300030000103000110000000000000000003121250000000000005301000603000000000002002000000000000400000000001030126151036283910018000200220000910500000900000000000000004020121110000516980251480141813150241500211100000000000051486242000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................231519.005190000000000000000000010700000000000009180330000202220000000000000000000000000000000000000000030023110001200000000000000301010101061000000000000110030486030100000100000020211010200000001000100110010000000010000000000021400254211200000000104022500001040200001500000000000000021000022600000913514025112032801100151500171930000000000012362451662000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................221307.00307000000000000000000000000000000000000000020002000000100000000000000000000000000000000000000010011100000100000000100000100000001002000000000000000000010032000000000000150400010114000120100011006000100000000940020000002210024100200000000005002100002102000001000000000000000060001030000114125131104100140170530003100000001000754131464000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................241267.0026700000000000000000000000000000000000120002050000016250000000000000000000000000000020001000001200200000030000000000000051010002000300000000000000000000003010000000000006601000101040000000010000000000000000101000000000000010212000000000052032000070020000040000000000000001300031200000314203411500572240420017310000000000515111752000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAATC..................................................................................261261.00261000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................251189.00189000000000000000000000010000000000000100001000010124000000000000000000000000000000000000000000010100002000000000000001000000100001000000000000000000211000000000000000200000000000000000000001100000000000000000000000000002652711304110000101001001000001002000001000000000000000030001000000000010311001000101000050000000000002442020000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................211182.001820000200000000000000001000000000000000000000011010000000010000000000000000000000000000000000100302000070000000000000000000000010200000000000000000000000130000000000002201000102000000000111001000400000000000000000001021014361572000000000200000000000000001000000000000000618012101240000002020100000012301400560000000000002200100000000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT.......................................................................................231164.0016400000000000000000000000000000000000100000100000110200000000000000000000000000000000000000011002020000200000000002000000000000000000000000000000010101110020000000000010000000000000000000000000000010000000000000000010000124020100000000100000000010000000100000000000000007010101000002513039530019015070005151000000000001331221000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................231147.0014700000000000000000000001000000000000010100140101152100000000000000000000000000000000001000000100500000010000000000000024000002000310000000000000000002100011000000000000101000000000100000000000000000000000000000000000000000010000000000000004000010000000020000000000000000600010000000223103650007011903100110000000000000100011000000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................221132.001320000000000000000000000100000000000001000000000000120000002000000000000000000000000000000000000000000000000000000100000000000010100000000000000000000010000000000000001401000301110000000000000000000000000300300000000010054348230000000001001000000010000010000000000000000300110000000030001824001205307000272000000000001012121000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................241132.0013200000000000000000000002000000000000000000000010001310000000000000000000000000000000030000110002010010600000000000000000000010000000000000000000000000001151000000000000000000000000000000000000000000000000200000000000000144671017000021000100000000000000003000000000000000000012010000020210530011101305100503000000000000102100000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................231129.001290000000000000000000000100000000000001010001000100020000000000000000000000000000000000000001100000001210000000000100000000000000000000000000000001111420010000000000001201000100030000000000000000010000000000000000000020011100020000100011001000001030000010000000000000000000000000000242301220023114031007120000000000051832441001000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGATC...................................................................................251123.00123000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010122000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................221121.00121000000000000000000000000000000000000100000001000003000000000000000000000000000000000000010000000000001000000000000000100000000010000000000000000000000000000000000000010100000001010000000000000000000000000000000000010100000000000000000000100002201000001000000000000000012100100000004566030001441010041002200000000000031352126000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................231120.00120000000000000000000000000000000000000002100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100111000000000000000000000000000000000000000000000010000000000000100001002021000000000001101000004001000003000000000000000000001000000031360101000210111062001010000000000041681733000100
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT...................................................................................261114.0011400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000001010100000000000000000000010000000000000000000706360400005019001000000001000000000000000000000000000000000000000200001000200102000000000000000000201000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................251113.00113000000000000000000000000000000000000100000000000013000001510400000000000000000000000000000000000010000000000000000100000000000000000000000000000000000001000000000000001001000000000000000000002000000000000000000000001000054627230000000000000000001000000010000000000000000100020000000021001002000310205200020000000000000400012000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................24197.00970000000000000000000000000000000000000000001000000000000057300000000000000000000000000000100000101000020000000100200000000000000000000000000000000001100002000000000000001000000000010000000000000010000000000000000000000154234010000000011000000010000000020000000000000000300001100000112001701010101202300020000000000001000100000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20194.00940000000000000000000000000000000000100000001010001010000023100000000000000000000000000000000100211000040000000000000000000000000010000000000001000000110100000000000001000000000000100000000000000000000000000000000000002000000000000000000023000033000000020000000000000000000000000000221701100000003002001000000000000041230463000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................25191.009100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000100000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000100200000100000000000010000200000000300000000000000001000000000002221021000230040710030100000000000319113310000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................20189.0089000000000000000000000000000000000000000000001000001000001000000000000000000000000000000000020030100000000000010000000000000001001000000000000000000100110000000000000210000010000000000000010000000000000000000000000010005121912000000000102100000001000000000000000000000090001231000021210000000002101200130000000000000301303000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................19186.0086000000000000000000000000000000010100111000000001000000004400000000000000000000000000000000000000000003000000000000000100000000000000000000000000021101000100000000000000000010011000000000000000010030000000002000000422000120001000000000000000000000000003000000000000000000001000000030420001000000301000011000000000001383312000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT...................................................................................25179.00790000000000000000000000000000000000000000001000000000100000000000000000000000000000000000010100100000060000000000100000000101000000000000000000000000000000000000000000003000000000000000000000000000000000100000000001000172212110000136000000000000000000000000000000000000010000010000013000020003100300200020000000000000220001000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................22169.00690000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000101000000020700000000000000000000000000000000000000000000000000000000000000030000000000000000000000001000000100000514910020080000203400000000000000001200000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................24163.0063000000000000000000000040000000000000000001000000004000000000000000000000000000000000000000000010000000000000000000001000000000021000000000000000000001000000000000000110000020000000000000000000000100000010000000000000102220000000000003001000000000000001000000000000000100000010000022050101020100102000510000000000000140000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................23151.0051000000000000000000000000000000000000000000100000600000000000000000000000000000000000000000010020000101000000000000000001000000000000000000000000000000000000000000000100100100000000000000000000000010000010000000000000000001000000000000100000002101000001000000000000000000001000000012010810010000000000221000000000002100012000000
............................................................................................................................................................GC-TGCCAT-TATGGCCAACG-ATCCGG.............................................................................................................25149.00490000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100010100000000020010000000000000000000000000000000000000000001000000000000000000000000000000000001003006542000000004300000000000000000000000000000000100001000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................19142.0042000000000000000000000000000000000000000000000000000000002210000000000000000000000000000010001000410012000000000000000000000100000000000000000000000000000000000000000010000220100010000001000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010230100000000200000000000000000001420010000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................24139.00390000000000000000000000200000000000000000100001001000000000000000000000000000000030000000000100111000010000000000000010000000000000000000000000001000000000000000000002000000000000000000000000000000000000010000000000000010000100000000000000000000000000000000000000000000100000100000000000000000001003001000000000000000200010000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................26139.0039000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000005030502000010000000000000000000000000000000000000000000000000020010011000000001000012000000000000810001000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTATC....................................................................................25138.003800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................................18137.0037000000000000000000000000000020000200000000000000000000000000000000000000000000000000000000000010001200000000000000000000001000200000000000000000010001100000000000000000000000020003000000000000000000000000000000000000100330100000000001000000000000000000000000000000000010000000000001200000020000100100000000000000001000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................21133.0033000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000110100030500010000100000000000000000000000000000001000010000000000000000000000100000000000000000000000000000000000010110210011000001200000000000000000010101000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................22133.0033000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000100026000000010000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000020000302010000002100100000010000001000110000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA....................................................................................25129.0029000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000001010000000010000001000000000000002000000000000000000000000000000010000000001002100000000000000002560100000000
.......................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTG........................................................................................22127.0027000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000100000000000020000002000000000000000000000000000000002000000101000110000000000000000100000000000000000000000000000000000000000010230000000000100000010000000000000110000000000
droSim2
GTG--TT---AGATGATACTTAAATGGTGATTAAT------------------------TTCGTCCTGGCTGA----------------------------CACTTAAGTCCT-TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCAT-CATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................24115466.00154661552057114328133273233741149111698593746000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2313906.0039069510201297329171110265301893100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2312130.00213028917394761267571634122200000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2311945.001945347371527001772401300000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................221822.0082230747270100558230210801000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................221587.00587268301749201053331127600000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221351.003511468631626325719200000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................191302.0030277172203814700001000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211265.0026578183971685000051700000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................241232.00232435169100001101200000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................................181208.0020800003217400002000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................241162.001621205200367216130600000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................201116.00116839700074230010000
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................221111.001111109600022000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................24195.00952038900200015101000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................20187.00871001127000002100000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................23179.0079836700000000100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25179.0079102600102218901001000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................21174.007417050001722940000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................21173.00733780422010000100000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20164.006425220131300000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................22161.0061546100000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................................18155.0055617063500000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................22141.0041326300000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24138.0038505000021112300000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25127.0027101900000010600000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23125.0025172100000000500000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................24123.0023123400000110200000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................19123.0023000041900000000000
.......................................................................................................................................GCGCCTGTATCTTGCTGAACC.........................................................................................................................................21118.0018121400001000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGG............................................................................................................................................20118.0018161100000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22113.001320210033200000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23112.001241000003000400000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGG.......................................................................................21110.001081100000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGC.......................................................................................2119.00981000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACA.........................................................................................................................................2319.00931200012000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGG............................................................................................1718.00800000001016000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................2318.00840000000000400000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................2418.00800000004010300000
...........................................................................................................................................................CGC-TGCCAT-CATGGCCAACG-ATCCGGT............................................................................................................2718.00821410000000000000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................2217.00700010000000600000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT...................................................................................2517.00700500000010100000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................2116.00610000022000100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2516.00640200000000000000
............................................................................................................................................................GC-TGCCAT-CATGGCCAACG-ATCCGG.............................................................................................................2516.00600300010000200000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAA..........................................................................................................................................2216.00651000000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACT.........................................................................................................................................2315.00530200000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2415.00500300000100100000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2515.00520300000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA......................................................................................2314.00400000012010000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................2514.00400000100000300000
............................................................................................................................................................GC-TGCCAT-CATGGCCAACG-ATCCG..............................................................................................................2413.00300200010000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................2313.00310000000001100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2313.00310000010000100000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG........................................................................................................................................2413.00301200000000000000
......................................................................................................................................CGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2113.00310200000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGACT...................................................................................2612.00210100000000000000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCT........................................................................................................................................2412.00210100000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTA......................................................................................2212.00210000000000100000
.....................................................................................................................................TCGCGCCTGTATCTTGCTG.............................................................................................................................................1912.00210010000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATTT..................................................................................2712.00220000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA...................................................................................2512.00200001000100000000
............................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................................2012.00200010001000000000
.............................................................................................................................................................................................CAAAATTTCAGGTGTGTGA.....................................................................................1912.00200000001010000000
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1812.00200000000001100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAT......................................................................................2312.00220000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGG.........................................................................................2012.00211000000000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................2211.00110000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAGT...................................................................................2611.00100000000000100000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................2411.00110000000000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2411.00100010000000000000
............................................................................................................................................................................................GCAAAATTTCAGGTGTGTG......................................................................................1911.00100000000001000000
droSec2
GT--------------------------GATTCAT------------------------TTCGTCCTGGCTGA----------------------------CAACCAAGTCCT-TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCAT-CATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGAT---------TTAT-CA-GACTGGTGATCATT-----------------TCCGGTGAGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................24119236.00192362724012121942758
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2316199.006199132222221101735
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2215249.00524916728862581938
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2313346.003346726461921707
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241888.008882044769352
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221837.0083735304174324
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211731.007312535241313
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211260.00260211137119
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................231186.00186221820
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................231173.00173682679
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201138.00138269661
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................251130.001307337218
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................221106.001063275719
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................251103.001033473419
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22178.007846608
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24160.0060483513
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................24140.0040372010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24132.003216214
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23126.002601628
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20123.002325214
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................24122.002231153
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................22119.00193583
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24118.00180738
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA......................................................................................23113.00130094
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................21113.00130292
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................23112.00120345
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................22112.00120903
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................25111.00110191
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................25110.00101612
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................23110.00100442
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2218.0080080
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2416.0060321
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2116.0062220
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2615.0050221
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT...................................................................................2515.0050131
...........................................................................................................................................................CGC-TGCCAT-CATGGCCAACG-ATCCGGT............................................................................................................2714.0040031
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................2314.0040301
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................2414.0040202
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2314.0040022
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................2014.0041102
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................2214.0040301
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA.........................................................................................2014.0040040
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA....................................................................................2514.0040310
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................1914.0041012
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................2614.0040112
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2114.0040130
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGCT....................................................................................2513.0031200
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................................2013.0031101
.......................................................................................................................................GCGCCTGTATCTTGCTGAACC.........................................................................................................................................2113.0030030
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................2513.0030030
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGCTT...................................................................................2512.0020002
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACA.........................................................................................................................................2312.0021010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA...................................................................................2512.0020011
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAC...................................................................................2512.0020011
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................2212.0020101
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTAT.....................................................................................2412.0020101
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG........................................................................................................................................2412.0020020
......................................................................................................................................CGCGCCTGTATCTTGCTGAAC..........................................................................................................................................2112.0020020
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1912.0021100
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT........................................................................................2112.0021001
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAA......................................................................................2312.0020020
droYak3
GT--------------------------GATTCAT------------------------TT-GTCCTGGTTGT-------------G----------------TCCAAGTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAAT-TATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGAT---------TTGC-AA-AGTTGGTAAAGCAATGCGGCTTG-----------GGTGGASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................2419353.0093531642925112419159384339810234
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2312672.002672102574664826913412540000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2211142.0011425935216581507670100
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2311031.00103110410906100010000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2311024.00102439130231321472470000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................241396.00396132268452970005
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................211296.00296641104135171090010
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221198.001983393237818610000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................221180.0018059411420010000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................25193.009325221412470000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................25180.008001223626310000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................21146.00461120145230000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................20138.0038020033300000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................23136.0036041246190000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24125.002501770730000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................22121.0021211700010000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................24120.0020051100040000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................25115.0015020001120000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................24115.001512801030000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................19114.001470600010000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23114.001401113260000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................25113.0013011200000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24112.001231330200000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22111.001101600220000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................2218.00805110010000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................2017.00710600000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................2615.00500000050000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2615.00501200020000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT...................................................................................2614.00400001030000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................2314.00400200020000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................................1814.00430100000000
......................................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................................2214.00402200000000
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2113.00302001000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................2513.00300010020000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................2413.00300110010000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2512.00201000010000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTCT.....................................................................................2412.00200000020000
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1812.00201100000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA....................................................................................2512.00200000110000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAT......................................................................................2312.00201000100000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA.........................................................................................2012.00200000020000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................2312.00200000020000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG........................................................................................................................................2412.00200200000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................2412.00200000200000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGATT...................................................................................2512.00201000010000
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................2012.00220000000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2312.00210010000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1912.00200000020000
.............................................................................................................................................................................................CAAAATTTCAGGTGTGTGA.....................................................................................1912.00200200000000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................2112.00200010010000
............................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................................2012.00201100000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG.......................................................................................2212.00220000000000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAA......................................................................................2311.00100000010000
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTC......................................................................................2211.00100100000000
droEre2
GTG--CT---AG-TGATACCTACTTGGTGATTCAT------------------------TT-GTCCTTGCTGA-------------A----------------CACGAGTCCT-TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAT-TATGGCCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................................24121613.002161383469934630947475908976
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................................2318697.0086974741481876942536460553
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................................2214506.0045062493613354180422282
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................................2313470.0034701718661535138212350
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT.....................................................................................2411310.001310485181349570427
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................................2111208.001208622342253347220
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................................221897.00897741528602624580
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT....................................................................................251254.00254163829910818
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA....................................................................................251217.002173083694760
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................................211188.001882303187740
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT.....................................................................................231175.00175602775850
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................................201118.00118101040760
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA....................................................................................241100.001001143351280
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................................231100.001001256182210
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT......................................................................................23191.00913121615540
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................................22171.00711621153250
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA.......................................................................................22152.0052614118220
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT....................................................................................24146.0046710218180
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC......................................................................................23144.004402004380
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................................20143.0043740011210
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA......................................................................................23139.003901116300
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG.....................................................................................24137.0037511118110
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC.....................................................................................24133.0033104113140
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT....................................................................................25126.002611009150
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................................22124.00248002860
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC.....................................................................................23120.002000033140
.....................................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................................20116.00163020290
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT...................................................................................26114.00141010813
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC....................................................................................25112.00125210310
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT.....................................................................................24111.00111000280
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC.......................................................................................2219.0090500130
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................................2119.0095010030
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA....................................................................................2519.0091010430
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................................1918.0081000160
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA......................................................................................2318.0083000140
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG.....................................................................................2317.0071000060
.....................................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................................2117.0072010220
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT......................................................................................2217.0071002130
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT........................................................................................2116.0061000230
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC....................................................................................2416.0061301010
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2616.0060000330
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................................2516.0061000320
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTCT.....................................................................................2415.0050000050
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTGA....................................................................................2515.0050000140
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA.........................................................................................2015.0050000050
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA.......................................................................................2115.0050000320
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGACT...................................................................................2614.0040000220
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT...................................................................................2614.0040000220
..............................................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................................1814.0040200020
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT....................................................................................2414.0040000040
...........................................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA.....................................................................................2114.0042002000
........................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTG.......................................................................................2214.0042000020
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................................2414.0040300100
..........................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................................2013.0030000120
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT...................................................................................2513.0030000120
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTTT.....................................................................................2313.0031000110
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................................1913.0031000110
.........................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTA......................................................................................2213.0030100110

Generated: 10/20/2015 at 07:44 PM