ID:

dwi-mir-316

 Coordinate:

scf2_1100000004511:1092706-1092794 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.6

Flybase annnotation

pre_miRNA [Dwil\mir-316-RM]; utr3 [utr3_minus_6480]; miRNA [Dwil\miR-316-RA]

Repeatable elements

NameClassFamilyStrand
(CATATA)nSimple_repeatSimple_repeat+

Sense Strand Reads

TGCACATATACATATATATCATCATATAGATATATATATAATGTATGTATAAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTCTCCACAAAATCTCTACAACTAAGTAAGTATAAACCTA

**************************************************((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 V118

embryo

 M020

head

 V119

head

 V117

male body
.................................................................TGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 0 1 38678.00 38678 23418 13307 416 1043 494
.................................................................TGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 0 1 3731.00 3731 2898 150 593 62 28
.................................................................TGTCTTTTTCCGCTTACTGG........................................................................................................ 20 0 1 3545.00 3545 3261 80 96 92 16
.................................................................TGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 0 1 3108.00 3108 991 1544 3 83 487
..................................................................GTCTTTTTCCGCTTACTGGCG...................................................................................................... 21 0 1 1959.00 1959 1949 8 0 2 0
.................................................................TGTCTTTTTCCGCTTACTG......................................................................................................... 19 0 1 1138.00 1138 70 3 1063 2 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTA................................................................ 22 0 1 537.00 537 228 241 1 5 62
.................................................................TGTCTTTTTCCGCTTACTGGCGTT.................................................................................................... 24 0 1 261.00 261 70 148 0 16 27
....................................................................CTTTTTCCGCTTACTGGCG...................................................................................................... 19 0 1 237.00 237 236 1 0 0 0
..................................................................GTCTTTTTCCGCTTACTGG........................................................................................................ 19 0 1 228.00 228 228 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGC....................................................................................................... 20 0 1 224.00 224 224 0 0 0 0
.....................................................................TTTTTCCGCTTACTGGCG...................................................................................................... 18 0 1 160.00 160 153 7 0 0 0
................................................................CTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 1 1 107.00 107 99 7 0 1 0
.................................................................TGTCTTTTTCCGCTTACTGGCGA..................................................................................................... 23 1 1 92.00 92 56 10 2 20 4
...................................................................TCTTTTTCCGCTTACTGGCG...................................................................................................... 20 0 1 88.00 88 85 3 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCT...................................................................................................... 22 1 1 79.00 79 39 21 11 5 3
.................................................................TGTCTTTTTCCACTTACTGGCG...................................................................................................... 22 1 1 69.00 69 56 12 0 1 0
..................................................................GTCTTTTTCCGCTTACTGGCGT..................................................................................................... 22 0 1 67.00 67 66 1 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................. 21 0 1 66.00 66 44 17 0 0 5
.................................................................TGTCTTTTTCCGCTTACTGGCGG..................................................................................................... 23 1 1 64.00 64 64 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCA...................................................................................................... 22 1 1 59.00 59 46 9 1 3 0
................................................................ATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 1 1 49.00 49 49 0 0 0 0
.................................................................TGCCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 49.00 49 15 29 2 3 0
.................................................................CGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 44.00 44 18 21 0 5 0
....................................................................CTTTTTCCGCTTACTGGC....................................................................................................... 18 0 1 42.00 42 42 0 0 0 0
.................................................................TGTCCTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 40.00 40 14 21 0 4 1
.................................................................TGTCTTTTTCCGCTTACTGGAG...................................................................................................... 22 1 1 38.00 38 7 27 0 4 0
......................................................................................................GACAGGAAAGGGAAAAAGGCGTA................................................................ 23 0 1 36.00 36 6 27 0 1 2
.................................................................TGTCTTTTTCCGCTTACTTGCG...................................................................................................... 22 1 1 34.00 34 4 28 0 1 1
................................................................TTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 0 1 33.00 33 32 1 0 0 0
................................................................GTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 1 1 33.00 33 33 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGTCG...................................................................................................... 22 1 1 32.00 32 7 25 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGACG...................................................................................................... 22 1 1 32.00 32 23 6 0 2 1
.................................................................TGTCTCTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 30.00 30 13 13 0 3 1
.................................................................TGTCTTTTTCCTCTTACTGGCG...................................................................................................... 22 1 1 30.00 30 11 16 1 1 1
.................................................................TTTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 29.00 29 13 15 0 0 1
.................................................................TGTCTTTTTCCCCTTACTGGCG...................................................................................................... 22 1 1 29.00 29 20 7 0 2 0
.................................................................TGTCTTTTTACGCTTACTGGCG...................................................................................................... 22 1 1 28.00 28 2 20 1 5 0
.................................................................TGTCTTTTTCAGCTTACTGGCG...................................................................................................... 22 1 1 27.00 27 3 22 0 2 0
.................................................................TGTCTTTTTCCGCTTACCGGCG...................................................................................................... 22 1 1 27.00 27 9 15 0 3 0
.................................................................TGTCTTTTTCCGCTTACTGGA....................................................................................................... 21 1 1 25.00 25 22 0 0 3 0
.................................................................TGTCTTTTTCCGCTTACTGCCG...................................................................................................... 22 1 1 23.00 23 7 13 0 2 1
.................................................................TGTATTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 23.00 23 1 18 0 4 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................. 20 0 1 23.00 23 17 2 0 0 4
.................................................................TGTCTTTTTCCGCCTACTGGCG...................................................................................................... 22 1 1 23.00 23 12 9 0 1 1
.................................................................TGTCTTTTTCCGATTACTGGCG...................................................................................................... 22 1 1 21.00 21 0 17 1 3 0
.................................................................TGTCTTTCTCCGCTTACTGGCG...................................................................................................... 22 1 1 20.00 20 6 13 0 1 0
.................................................................TGTCTTTTTCCGCTTACTGGCC...................................................................................................... 22 1 1 19.00 19 3 13 0 3 0
...................................................................TCTTTTTCCGCTTACTGGC....................................................................................................... 19 0 1 17.00 17 16 0 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGT....................................................................................................... 21 1 1 17.00 17 12 1 0 3 1
.................................................................TGTCTTTTTCTGCTTACTGGCG...................................................................................................... 22 1 1 17.00 17 7 8 0 1 1
.................................................................TGTCTTCTTCCGCTTACTGGCG...................................................................................................... 22 1 1 17.00 17 4 13 0 0 0
...................................................................TGTCTTTCCGCTTACTGGCG...................................................................................................... 20 2 1 16.00 16 9 5 0 2 0
.................................................................TGTCTTTTTCCGCTTACTGGTG...................................................................................................... 22 1 1 16.00 16 7 8 0 1 0
.................................................................TGTCTTTTTCCGCTTACTAGCG...................................................................................................... 22 1 1 16.00 16 6 8 0 1 1
...................................................................TCTTTTTCCGCTTACTGG........................................................................................................ 18 0 1 15.00 15 15 0 0 0 0
.................................................................TGTCTTTTTCCGCTTATTGGCG...................................................................................................... 22 1 1 15.00 15 3 12 0 0 0
.................................................................TCTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 15.00 15 5 10 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAA............................................................... 23 1 1 15.00 15 11 2 0 1 1
.................................................................TGTCTTTTTCCGCTTCCTGGCG...................................................................................................... 22 1 1 14.00 14 1 10 0 3 0
.................................................................TGTCTTTTTCCGCTTACTGCG....................................................................................................... 21 2 1 14.00 14 6 8 0 0 0
.................................................................TGGCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 14.00 14 3 9 1 1 0
.................................................................TGTCTTTTTCCGCTCACTGGCG...................................................................................................... 22 1 1 14.00 14 7 5 1 1 0
.................................................................TGTCTTTTTCCACTTACTGGC....................................................................................................... 21 1 1 14.00 14 13 0 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGAC....................................................................................................... 21 1 1 13.00 13 0 0 13 0 0
.................................................................TGTCTTTTTCCGCTTGCTGGCG...................................................................................................... 22 1 1 13.00 13 8 4 0 0 1
.................................................................GGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 13.00 13 10 2 0 1 0
.................................................................TGTCTTTTCCCGCTTACTGGCG...................................................................................................... 22 1 1 13.00 13 2 9 1 0 1
.................................................................TGTCTTTTTCCACTTACTGG........................................................................................................ 20 1 1 12.00 12 12 0 0 0 0
.................................................................TGACTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 12.00 12 8 2 0 2 0
.................................................................TGTCTTTTTCCGCTTACTGGCGC..................................................................................................... 23 1 1 12.00 12 5 5 0 2 0
........................................................................................................CAGGAAAGGGAAAAAGGCGTA................................................................ 21 0 1 12.00 12 12 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTA.................................................................................................... 24 1 1 11.00 11 6 2 0 1 2
.................................................................TGTCTTTTTCCGCTTAATGGCG...................................................................................................... 22 1 1 11.00 11 0 8 0 3 0
.....................................................................................................CGACAGGAAAGGGAAAAAGGCGTA................................................................ 24 0 1 11.00 11 3 7 0 0 1
.................................................................TGTCTTTTTCCCCTTACTGG........................................................................................................ 20 1 1 10.00 10 10 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTT................................................................................................... 25 0 1 10.00 10 4 2 0 1 3
.................................................................TGTCTTTTTCCGCTTACT.......................................................................................................... 18 0 1 10.00 10 10 0 0 0 0
.................................................................TATCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 10.00 10 3 6 1 0 0
................................................................CTGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 1 1 10.00 10 10 0 0 0 0
.......................................................................................................ACAGGAAGGGGAAAAAGGCGTA................................................................ 22 1 1 10.00 10 5 0 0 0 5
.......................................................................................................ACAGGAAAGGGAAAAAGGC................................................................... 19 0 1 9.00 9 1 1 0 1 6
.................................................................TGTCTTTTTCCACTTACTGGCGT..................................................................................................... 23 1 1 8.00 8 4 2 0 1 1
..................................................................TTCTTTTTCCGCTTACTGGCG...................................................................................................... 21 1 1 8.00 8 5 3 0 0 0
................................................................CTGTCTTTTTCCGCTTACTGG........................................................................................................ 21 1 1 8.00 8 8 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTG......................................................................................................... 18 0 1 8.00 8 8 0 0 0 0
.................................................................TGTCTTTTTTCGCTTACTGGCG...................................................................................................... 22 1 1 8.00 8 2 6 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCTT..................................................................................................... 23 1 1 8.00 8 2 5 0 0 1
..................................................................GTCTTTTTCCGGTTACTGGCG...................................................................................................... 21 1 1 7.00 7 7 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTCG........................................................................................................ 20 1 1 7.00 7 3 0 3 1 0
.................................................................TTTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 7.00 7 5 2 0 0 0
................................................................TTGTCTTTTTCCGCTTACTGG........................................................................................................ 21 0 1 7.00 7 7 0 0 0 0
.................................................................TGTCTTTTTCCGTTTACTGGCG...................................................................................................... 22 1 1 7.00 7 2 3 0 2 0
.................................................................TGCCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 7.00 7 5 0 2 0 0
.................................................................TGTCTTTTTACGCTTACTGGCGT..................................................................................................... 23 1 1 6.00 6 0 6 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGT........................................................................................................ 20 1 1 6.00 6 4 0 1 1 0
.....................................................................TTTTTCCGCTTACTGGCGT..................................................................................................... 19 0 1 6.00 6 4 1 0 0 1
.................................................................TGTGTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 6.00 6 2 3 0 1 0
.................................................................TGTCTTTTTCGGCTTACTGGCG...................................................................................................... 22 1 1 6.00 6 4 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTCGCG...................................................................................................... 22 1 1 6.00 6 0 6 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGGG...................................................................................................... 22 1 1 6.00 6 2 2 2 0 0
.................................................................TGTCTTTTTCCGCTTACTGGAGT..................................................................................................... 23 1 1 6.00 6 0 6 0 0 0
.................................................................TGTCTTATTCCGCTTACTGGCG...................................................................................................... 22 1 1 6.00 6 5 1 0 0 0
.................................................................TGTCTTTTTCCGCTTTCTGGCG...................................................................................................... 22 1 1 6.00 6 5 1 0 0 0
....................................................................CTTTTTCCGCTTACTGGCGT..................................................................................................... 20 0 1 6.00 6 6 0 0 0 0
...................................................................TCTTTTTCCGCTTACTGGCGT..................................................................................................... 21 0 1 5.00 5 4 1 0 0 0
.................................................................TGTCTTTTTCCGGTTACTGGC....................................................................................................... 21 1 1 5.00 5 0 0 5 0 0
.................................................................TGCCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 5.00 5 5 0 0 0 0
................................................................GTGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 1 1 5.00 5 5 0 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAT............................................................... 23 0 1 5.00 5 5 0 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGG.................................................................... 18 0 1 5.00 5 1 2 0 0 2
.................................................................TGTCTTTTACCGCTTACTGGCG...................................................................................................... 22 1 1 5.00 5 3 2 0 0 0
..................................................................GTCTTTTTCCGATTACTGGCG...................................................................................................... 21 1 1 5.00 5 5 0 0 0 0
.................................................................TGTCTTTTTCCTCTTACTGGC....................................................................................................... 21 1 1 5.00 5 4 0 0 1 0
.................................................................TGTCTTTTTCCGCTTACTGGTGT..................................................................................................... 23 1 1 5.00 5 2 2 0 0 1
..................................................................GTCTTTTTCCGCTTACTGGCGG..................................................................................................... 22 1 1 5.00 5 5 0 0 0 0
.................................................................TGTTTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 5.00 5 0 5 0 0 0
.................................................................TGTCTTTTTCCGCTTACGG......................................................................................................... 19 1 1 5.00 5 0 0 5 0 0
.................................................................TTTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 5.00 5 5 0 0 0 0
.................................................................AGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 5.00 5 3 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGC........................................................................................................ 20 1 1 4.00 4 4 0 0 0 0
.................................................................TGTCTTTTTCCGGTTACTGGCG...................................................................................................... 22 1 1 4.00 4 0 1 3 0 0
.................................................................TGTCCTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 0 3 0 0 1
.................................................................TGTCTTTTTCCCCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 2 1 0 1 0
.................................................................TGTCTTTTTCCGCATACTGGCG...................................................................................................... 22 1 1 4.00 4 1 2 0 1 0
................................................................ATGTCTTTTTCCGCTTACTGG........................................................................................................ 21 1 1 4.00 4 4 0 0 0 0
......................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................. 22 0 1 4.00 4 3 0 0 0 1
................................................................ATGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 1 1 4.00 4 4 0 0 0 0
.................................................................TGTCTCTTTCCGCTTACTGG........................................................................................................ 20 1 1 4.00 4 4 0 0 0 0
.................................................................TGTCTTTTTCCTCTTACTGG........................................................................................................ 20 1 1 4.00 4 4 0 0 0 0
.................................................................TGTCTTTTTCCGCGTACTGGCG...................................................................................................... 22 1 1 4.00 4 1 2 0 1 0
.................................................................TGTCTTTTTCCGCTTACTAGCGT..................................................................................................... 23 1 1 4.00 4 1 3 0 0 0
.................................................................TGTCTTTTTCCTCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 0 4 0 0 0
...............................................................TCTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 1 1 4.00 4 2 2 0 0 0
.................................................................TGCCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 1 1 0 0 2
.................................................................TGTCTTTTTCCGCTTACTGGCGTAA................................................................................................... 25 2 1 4.00 4 1 0 0 3 0
.................................................................CGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 0 4 0 0 0
.................................................................TGTCTTTTTCCGCTTACTTGCGT..................................................................................................... 23 1 1 4.00 4 0 3 0 0 1
................................................................TTGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 0 1 4.00 4 4 0 0 0 0
.....................................................................................................CGACAGGAAAGGGAAAAAGGCGT................................................................. 23 0 1 3.00 3 2 1 0 0 0
.................................................................TGTCTTTTTCCGATTACTG......................................................................................................... 19 1 1 3.00 3 0 0 3 0 0
.................................................................TGTCTTTTTCCCCTTACTGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0 0
..............................................................AATTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 25 1 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACCGG........................................................................................................ 20 1 1 3.00 3 2 0 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGAT.................................................................................................... 24 1 1 3.00 3 1 1 0 1 0
...............................................................GATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 2 1 3.00 3 3 0 0 0 0
................................................................GTGTCTTTTTCCGCTTACTGG........................................................................................................ 21 1 1 3.00 3 3 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCGA..................................................................................................... 22 1 1 3.00 3 3 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGA....................................................................................................... 20 1 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGCC....................................................................................................... 21 1 1 3.00 3 2 0 1 0 0
......................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................. 21 0 1 3.00 3 0 1 0 0 2
...............................................................TTTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTCTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 3.00 3 0 1 0 0 2
.......................................................................................................ACAGGAAAGGGGAAAAGGCGTA................................................................ 22 1 1 3.00 3 2 1 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCGTT.................................................................................................... 23 0 1 3.00 3 2 1 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCA...................................................................................................... 21 1 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTA................................................................................................... 25 1 1 3.00 3 2 0 0 1 0
.................................................................TATCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACAGGCG...................................................................................................... 22 1 1 3.00 3 1 2 0 0 0
.................................................................TGTCTTTTTCCGCTAACTGGCG...................................................................................................... 22 1 1 3.00 3 2 1 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGAA...................................................................................................... 22 2 1 3.00 3 2 0 0 1 0
.................................................................TGTCTTTTTCCGCTTACTGTCGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0 0
....................................................................CTTTTTCCGCTTACTGGCA...................................................................................................... 19 1 1 3.00 3 3 0 0 0 0
.................................................................TGTCTGTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 3.00 3 2 0 0 1 0
.................................................................TGTCTCTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 3.00 3 2 0 0 0 1
.................................................................CGTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0 0
..................................................................GTCTTTTTCCGGTTACTGGC....................................................................................................... 20 1 1 3.00 3 3 0 0 0 0
.................................................................AGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 3.00 3 2 0 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGTC....................................................................................................... 21 1 1 3.00 3 2 1 0 0 0
.................................................................TGTCTTTTTCCGCTTACCGGC....................................................................................................... 21 1 1 3.00 3 1 0 2 0 0
.................................................................TGACTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0 0
...............................................................ATTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 1 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACCGGCGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0 0
..............................................................AACTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 25 2 1 3.00 3 3 0 0 0 0
...............................................................CATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 2 1 3.00 3 3 0 0 0 0
.............................................................CAGATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 26 3 1 3.00 3 3 0 0 0 0
......................................................................TTTTCCGCTTACTGGCGT..................................................................................................... 18 0 1 3.00 3 3 0 0 0 0
.................................................................TGTCTTTCTCCGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 1 0 0 1
.................................................................TGTCTTTTTCCGCCTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 1 0 1 0
................................................................CTGTCTTTTTCCGCTTACTGGA....................................................................................................... 22 2 1 2.00 2 2 0 0 0 0
.................................................................TGCCTTTTTCCGCTTACTGGCGTT.................................................................................................... 24 1 1 2.00 2 0 2 0 0 0
................................................................CTGTCTTTTTCCGCTTACTG......................................................................................................... 20 1 1 2.00 2 1 0 1 0 0
.............................................................CAACTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 26 3 1 2.00 2 2 0 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAC............................................................... 23 1 1 2.00 2 1 0 0 0 1
.................................................................TGTCTTTTTCCACTTACTG......................................................................................................... 19 1 1 2.00 2 1 0 1 0 0
.................................................................TCTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 1 0 0 0 1
.................................................................TGTCTTTTTCCGCTTAATGGCGT..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
.................................................................TGTATTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 2.00 2 1 0 1 0 0
.................................................................TGTCTTTTTCCGCTGACTGGCG...................................................................................................... 22 1 1 2.00 2 2 0 0 0 0
.................................................................TGGCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 1 0 0 1
............................................................CAAAATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 27 3 1 2.00 2 2 0 0 0 0
.................................................................GGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 2.00 2 1 0 0 1 0
.................................................................TCTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 2.00 2 2 0 0 0 0
.................................................................TGTCTTTTTCCGCTTATTGGC....................................................................................................... 21 1 1 2.00 2 0 0 0 1 1
....................................................................ATTTTTCCGCTTACTGGCG...................................................................................................... 19 1 1 2.00 2 2 0 0 0 0
..................................................................GTCTTTTTCCGCTTAGTGGCG...................................................................................................... 21 1 1 2.00 2 2 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGG....................................................................................................... 21 1 1 2.00 2 1 0 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCAT..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
.............................................................AAGCTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 26 3 1 2.00 2 2 0 0 0 0
......................................................................................................GACAGGAAAGGGAAAAAGGC................................................................... 20 0 1 2.00 2 0 0 0 0 2
...............................................................CTTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 1 1 2.00 2 2 0 0 0 0
.................................................................TGTCTTTTTCAGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
.................................................................TGTCTTTTTCCGGTTACTGG........................................................................................................ 20 1 1 2.00 2 0 0 2 0 0
...............................................................ATTGTCTTTTTCCGCTTACTGGC....................................................................................................... 23 1 1 2.00 2 2 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTGACG...................................................................................................... 21 1 1 2.00 2 2 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCCT..................................................................................................... 23 1 1 2.00 2 0 1 0 1 0
.................................................................TGTCCTTTTCCGCTTACTGG........................................................................................................ 20 1 1 2.00 2 2 0 0 0 0
..................................................................GTCTTTTTCCGCCTACTGGCG...................................................................................................... 21 1 1 2.00 2 2 0 0 0 0
.................................................................TGCCTTTTTCCGCTTACTG......................................................................................................... 19 1 1 2.00 2 1 0 1 0 0
...............................................................GCTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 2 1 2.00 2 2 0 0 0 0
................................................................GTGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 24 1 1 2.00 2 2 0 0 0 0
....................................................................CTTTTTCCGCTTACTGGCGG..................................................................................................... 20 1 1 2.00 2 2 0 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGACGTA................................................................ 22 1 1 2.00 2 0 1 0 0 1
................................................................CTGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 24 1 1 2.00 2 1 0 0 0 1
.................................................................TGTCTTTTTCCGCTTACTGACGT..................................................................................................... 23 1 1 2.00 2 1 1 0 0 0
.................................................................TGTCTTTTTCCGCTTACTCGCGT..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
.......................................................................................................ACAGGAAAGGTAAAAAGGCGTA................................................................ 22 1 1 2.00 2 0 2 0 0 0
.................................................................TGTCTTTTTCTGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
...............................................................GATGTCTTTTTCCGCTTACTGG........................................................................................................ 22 2 1 2.00 2 2 0 0 0 0
...................................................................TGTCTTTCCGCTTACTGGCGT..................................................................................................... 21 2 1 2.00 2 0 2 0 0 0
.................................................................TTTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTT................................................................ 22 1 1 2.00 2 0 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACGGGC....................................................................................................... 21 1 1 2.00 2 1 1 0 0 0
........................................................................................................CAGGAAAGGGAAAAAGGCGT................................................................. 20 0 1 2.00 2 2 0 0 0 0
..................................................................GTCTTTTTCCGGTTACTGG........................................................................................................ 19 1 1 2.00 2 2 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGAA.................................................................................................... 24 2 1 2.00 2 0 0 1 1 0
....................................................................CTTTTTCCGCTGACTGGCG...................................................................................................... 19 1 1 2.00 2 2 0 0 0 0
.................................................................TGTCTTTTTCCGCTTATTGGCGT..................................................................................................... 23 1 1 2.00 2 1 0 0 1 0
.....................................................................TTTTTCCGCTTGCTGGCGT..................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGCGT...................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
......................................................................................................GACAGGAAAGGGTAAAAGGCGTA................................................................ 23 1 1 1.00 1 1 0 0 0 0
...................................................................TCTTTTTCCGCATACTGGCG...................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.................................................................TGTTTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
...........................................................TCCAACTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 28 3 1 1.00 1 1 0 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGTGTA................................................................ 22 1 1 1.00 1 0 1 0 0 0
.......................................................................................................TCAGGAAAGGGAAAAAGGCGTA................................................................ 22 1 1 1.00 1 0 1 0 0 0
..................................................................TTCTTTTTCCGCTTACTGGCGT..................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
................................................................CTGTCTTTTTCAGCTTACTGGCG...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
...........................................................TCACTGTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 28 3 1 1.00 1 1 0 0 0 0
.............................................................CAAGTGTCTTTTTCCGCTTACTGG........................................................................................................ 24 3 1 1.00 1 1 0 0 0 0
....................................................................TTTTTTCCGCTTACTGGCG...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
................................................................CTGTCTTTTTCCGCTTACT.......................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
................................................................CTGTCTTTTTCCGCTTGCTGGCG...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGAG.................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCT...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTGTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTGTCG...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................TATCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
...............................................................GATGTCTTTTTGCGCTTACTGGCG...................................................................................................... 24 3 1 1.00 1 1 0 0 0 0
.................................................................TGTCTGTTTCCGCTTACTGG........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0
.............................................................GGGCTGTCTTTTTCCGCTTACTGG........................................................................................................ 24 3 1 1.00 1 1 0 0 0 0
.................................................................TGTTTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.......................................................................................................ACAGGAAAGGGGAAAAGGCG.................................................................. 20 1 1 1.00 1 1 0 0 0 0
................................................................ATGTATTTTTCCGCTTACTGGCG...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTACGCTTACTGGC....................................................................................................... 21 1 1 1.00 1 0 0 0 1 0
..............................................................CAGTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 25 3 1 1.00 1 1 0 0 0 0
..............................................................AATTGTCTTTTTCCGCTTACTGG........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCTG..................................................................................................... 23 2 1 1.00 1 0 0 1 0 0
......................................................................................................GACAGGAAAGGGAAAAAGGCCTA................................................................ 23 1 1 1.00 1 0 0 0 0 1
..................................................................GTCCTTTTCCGCTTACTGGCG...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCCGCCTACTGGC....................................................................................................... 21 1 1 1.00 1 0 0 1 0 0
.....................................................................CTTTTCCGCTTACTGGCG...................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
................................................................ATGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCCACTTACTGGA....................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTGCCGCTTACTGGC....................................................................................................... 21 1 1 1.00 1 0 0 1 0 0
.................................................................TGTCCTTTTCCGCTTACTGGCGTT.................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.................................................................TGCCTTTTTCCGCTTACTTGCG...................................................................................................... 22 2 1 1.00 1 0 1 0 0 0
.................................................................TGTCTTTTTCCGATTACTGGCGT..................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGT....................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
....................................................................CTTTTTCCGCTTATTGGCG...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCTGCTTACTGGC....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCAGCTTACTGGCGTT.................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
.................................................................TGTCTTTTTCAGCTTACTG......................................................................................................... 19 1 1 1.00 1 0 0 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGGG.................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
..............................................................CATTGTCTTTTTACGCTTACTGGCG...................................................................................................... 25 3 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAAA.................................................................................................. 26 3 1 1.00 1 0 1 0 0 0
.................................................................TGTCTTTTTCGGCTTACTGG........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTCTTTCCGCTTACTGGCGTT.................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..............................................................GAGTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 25 3 1 1.00 1 1 0 0 0 0
.......................................................................................................ACAGGAAACGGAAAAAGGCGTA................................................................ 22 1 1 1.00 1 0 1 0 0 0
............................................................CAAACTGTCTTTTTCCGCTTACTGG........................................................................................................ 25 3 1 1.00 1 1 0 0 0 0
...............................................................AATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
.............................................................GCGGTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 26 3 1 1.00 1 1 0 0 0 0
...............................................................ACTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
...............................................................GTTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTCCCGCTTACTGGCGC..................................................................................................... 23 2 1 1.00 1 0 1 0 0 0
..........................................................ATCGCGTTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 29 3 1 1.00 1 1 0 0 0 0
..................................................................TTCTTTTTCCGCTTACTGGC....................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
...............................................................GGTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
......................................................................................................GACAGGAAAGGGAAAAAGG.................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................TAGTTGTCTTTTTCCGCTTACTGG........................................................................................................ 24 2 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTTCGGCTTACTGGC....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..............................................................ATCTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..................................................................GTCTTTTTCCGCTTACTGT........................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
....................................................................CTTTTCCCGCTTACTGGCG...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTATTTCCGCTTACTGGCG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.................................................................TGTCTTTTCCCGCTTACTGGC....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.......................................................................................................ACAGGCAAGGGAAAAAGGCGTA................................................................ 22 1 1 1.00 1 0 1 0 0 0
................................................................GTGTCTTTTTCCGCTTACTGGCGG..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
..................................................................GTCTTTTTCCGCTTACTAGCG...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................GGTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 1.00 1 1 0 0 0 0

Anti-sense strand reads

ACGTGTATATGTATATATAGTAGTATATCTATATATATATTACATACATATTTAAGATCAGCTAAACAGAAAAAGGCGAATGACCGCAAAATAAATTGATTGCTGTCCTTTCCCTTTTTCCGCATAAATGATACTCAAATTAGTTGTTTAAGAGGTGTTTTAGAGATGTTGATTCATTCATATTTGGAT

*************************************************((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004511:1092656-1092844 + dwi-mir-316 Known_mirbase TGCAC------A-TA-TACATATATATC-------ATCATATAGATATATA---TATAATGT-----ATG------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTCT---CCA-CAAAATC------TC----------------------------TA----CA-------ACT------------------------AAGTAAGTATAAACCTA
droVir3 scaffold_13049:24266822-24267008 + dvi-mir-316 Known_mirbase TATAT----C---T---------------------------------------------TTG-----ATC------TATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATTTGTTCAACCAATC----------------------TGTTT----------------AAACACCTATTCAATGAAAAGAAATGCTAATCATACAAATAGAGAT-CAACTGGTGAGTA--GCCCTT
droMoj3 scaffold_6680:18891169-18891305 + dmo-mir-316 Known_mirbase TCAAA------A-TA-A-------TATTTGATCTAACTGAATCG--------------ATTT-----TTA------TATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGACGTTTTATT-GAACAACGGCAGGGAAGGGAAAAAGGCGTATTTACTATGAATTATTTCAACGA------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:9481997-9482172 - dgr-mir-316 Known_mirbase TGTAT----AA-GTA-T-------TGTA----------------------------T---GA--T-TAAGCAATC-TTCAGAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATGTAATCAACAAAC-----------C------TATTC---------------------AAATATCTAT-----AA-------AGCT--------------AGAA-CAACTGGTGAGTA--ACCCTC
dp5 XR_group6:4548548-4548718 + dps-mir-316 Known_mirbase TAAAT------A-TA-T-------TGTA----------------------------AAA-------TATACAAAGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCC------AATTCAGCTTAATA-------------------------------------------------------------ATAGGTGAGTACATCCCCA
droPer2 scaffold_9:2845586-2845756 + dpe-mir-316 Known_mirbase TAAAT------A-TA-T-------TGTA----------------------------AAA-------TATACAAAGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCC------AATTCAGCTTAATA-------------------------------------------------------------ATAGGTGAGTACATCCCCA
droAna3 scaffold_13337:3985712-3985854 - dan-mir-316 Known_mirbase AAC---------------------------------------------------------AT-----ATA------TTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGT-------CAAAGTCTAAATTAA---AAAAT-----------GTC-----------------------------------------------------------ATCATC
droBip1 scf7180000395450:119441-119582 - A-------TA---------------------------------------------------C-----ATA------TTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGA-------CAACGTCTAATTTAG---AACAT-----------GTC-----------------------------------------------------------ATCATG
droKik1 scf7180000302272:829423-829589 + A-------TATAGTAT--------------------------------ATA---TACAGTGTAACGTCTA------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCATCAAGCTAT---CTG---------TATTCTG----------------------------T-----GA-------TATA--------------TGAATGTACAGGTGAG----------
droFic1 scf7180000453831:501982-502180 - TGTTCGGATCT-GTAT-------GTGTC--------------GGATAGACT---AAAAGTTA-----ATG------CAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGAAGTTTTATTTGAACAACGTCAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGGCCATCAGTTTCA---CCT-T-----------CAACGGAGCA-ATGTGTCCACT-----CCTCTT----CG-------TTA------------------------AGGTGAGTATGCCCCAA
droEle1 scf7180000491199:1233829-1233975 + A---------------------------------------------------------GTGT-----ATA------CAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAAAAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGACCAGCAATTTGCACCCAATCAAGCTA------TT----------------------------GA----CA-------TCC------------------------ATGTAAGTAT-------
droRho1 scf7180000780271:105040-105192 + A---------------------------------------------------------GTGT-----ATA------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATT-GCAAGTAATAAAGCTA------TC----------------------------TG----CA-------TTC------------------------CTGTAAGTATGTTCCCA
droBia1 scf7180000302377:1644769-1644915 + A---------------------------------------------------------GTGT-----ATA------CGT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTACACAACGACAGGAAAGGGAAAAAGGCGTATTTACTACGAGTTTGACCAACGATTTGCAGGTGACTC-----------------------------------------TC----GA-------TCG------------------------GTGCAAGTGCAGGAAAG
droTak1 scf7180000411025:47410-47543 + TCAGA---TCG-GTAT--------------------------------TTGCCTAAAAGTGT-----ACA------CAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATATTAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATTTC--------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409472:489550-489695 - A-------TAT-CA--------------------------------------------GTGTACTATATA------TCT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTTGCCAACGATTCGCAGTTGGTCATT-----------------CT-----------AAA-----------------------------------------------------------CACCTA
dm3 chr3L:21661764-21661927 - dme-mir-316 Known_mirbase A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCAGCGATTTGCAGGTGATCCAGGTG------TATATAGTA-------------------------------------------------------------TT-AGTAAGTAT-----TT
droSim2 3l:21179426-21179589 - dsi-mir-316 Known_mirbase A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCAGGTGATCCAGGTG------TGTATAGTA-------------------------------------------------------------TT-AGTAAGTAT-----TC
droSec2 scaffold_11:1581842-1581995 - dse-mir-316 Known_mirbase A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCAGGTGATCCA-----------------------------------------------------------------------------------GGTGTGTATAGTATTA
droYak3 3L:18849485-18849626 + dya-mir-316-1 Known_mirbase A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGACCAGCGATTTGCAGGTGATCAAGGTG-----------------------------------------------------------------------------------------------
droEre2 scaffold_4784:21318776-21318933 - der-mir-316 Known_mirbase GAA-----------AT--------------------------------ACA---CAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTCACTATGAGTTTGGCCAGCGACTTGCAGGTGATCAAGGTG------TATGTAGTAT-----------ACC-----------------------------------------------------------CTCTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGCAC------A-TA-TACATATATATC-------ATCATATAGATATATA---TATAATGT-----ATG------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTCT---CCA-CAAAATC------TC----------------------------TA----CA-------ACT------------------------AAGTAAGTATAAACCTASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22138678.003867841623418494133071043
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2113731.00373159328982815062
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2013545.003545963261168092
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2313108.0031083991487154483
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2111959.00195901949082
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................1911138.001138106370032
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................221537.005371228622415
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................241261.002610702714816
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................191237.002370236010
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................191228.002280228000
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201224.002240224000
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................181160.001600153070
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................23192.009225641020
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20188.0088085030
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................22179.007911393215
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................22167.0067066010
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................21166.00660445170
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23164.0064064000
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................22159.0059146093
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18142.0042042000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................23136.0036062271
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23133.0033032010
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................21125.0025022003
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20123.0023017420
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22119.0019030133
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19117.0017116000
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................21117.0017012113
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................18115.0015015000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................23115.0015011121
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................21114.001406080
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................23112.001205052
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................21112.0012012000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................24111.001106221
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................24111.001103170
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................25110.001004321
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18110.0010010000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................1919.00901611
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................1818.00808000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2117.00707000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................2016.00614001
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1916.00604110
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2016.00606000
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2115.00504010
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................2315.00505000
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................1815.00501220
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2215.00505000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2014.00404000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2214.00403100
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................2514.00401003
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2214.00404000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2313.00302010
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2213.00303000
................................................................................................GTCTTTTTCCGCTTACTGGA................................................................................................................................................................................2013.00303000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2113.00300210
.............................................................................................TTTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2413.00303000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2313.00302010
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2113.00303000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................2513.00302001
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................2213.00302001
..................................................................................................CTTTTTCCGCTTACTGGCA...............................................................................................................................................................................1913.00303000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1813.00303000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2312.00201100
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................2112.00211000
....................................................................................................................................GACAGGAAAGGGAAAAAGGC............................................................................................................................................2012.00200200
..................................................................................................CTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2012.00202000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2212.00200020
......................................................................................................................................CAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2012.00202000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................2412.00210001
...............................................................................................TGTCTTTTTCCGCTTACTGCGT...............................................................................................................................................................................2211.00101000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAG.............................................................................................................................................................................2411.00101000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................2111.00101000
...............................................................................................TGTCTTTTTCCGCTTACTGGCTG..............................................................................................................................................................................2311.00110000
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................2011.00101000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGGG.............................................................................................................................................................................2411.00101000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA...........................................................................................................................................................................2611.00100010
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1911.00101000
................................................................................................GTCTTTTTCCGCTTACTGT.................................................................................................................................................................................1911.00101000
droVir3
TATAT----C---T---------------------------------------------TTG-----ATC------TATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATTTGTTCAACCAATC----------------------TGTTT----------------AAACACCTATTCAATGAAAAGAAATGCTAATCATACAAATAGAGAT-CAACTGGTGAGTA--GCCCTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................221201418.00201418356993844920798505775233169396562690001233103624148448919035855366751930315231174825319737174282949394303980197470016767540301000000011214066528701750144506971444011139814041034637140595613442
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................23120563.00205630122993662741862616138541921100011187245649447088610442528327743733929622253826275505172004163106500000000102001000061415654872116200000711453000000
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................21114667.001466725225553574468497160720003521817942351332971081187579271225563502000007410110000000010135515231152491172871009661055664371100869902012
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2018039.0080397036549215994112514000001010225002228394422257332106265028000014561100010000081231341012881605709209000861107645926701002
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2215426.0054265036529837199293001054667900060271340202114523433670441156469165524157301580000239000000000000101000112902740392321425712311110
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2113565.003565003504405300000000000004011020011921301000012000000000000000000001100000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................1912319.00231943449115820750000000111111521364243856223508000031300000000000000010020600050002262191147320316500000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2411181.001181007714128229133212000751601534536112117171691285819004000001373000000000000000000083275141400010001000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2111129.0011292085308645962614126000823422156431752161859547106022000031800000000000000000110045031300025101000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................231859.008590020645316105000024325010588813131812213041112014000061600000000000000000002168032500030120100000
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................221751.00751711164253924115100030010058142213516107164326903200001029000000000000000000016813011000010200000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................221530.00530111373278102000052132211315311111183522575060000413000000000000000000005402900041225500000
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................191529.005291042190240000000100320100143331191851100000004000000000000000000010002000000100000000
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201483.00483004820000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................251442.00442003111241112310005110341932753975744231050200000135000000000000000000001603300000000000000
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................181421.0042100318607910100000001002203230361351909000015000000000000000000002001100001000000000
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................191402.00402003991000000000000000000100000100000000000000000000000000000000000000000000000000
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................201240.002400020730000000000000000200011116110201000011000000000000000000010100000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................231211.00211001223215267193000300301600021022522623011000004000000000000110000000900200000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................231205.0020500131070417100043002150015472194113310110000020000000000000000010101401000000003000000
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................221182.00182001680003000000010000020000010031100000001000000000000000000000100000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................231142.001420016560441000000000001512011301495702000027000000000000000000010000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................241141.00141001210431020000020100304235202018821050000320000000000000000000071001100000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................211120.0012002562131000000010000021000013121031300000000000000000000000000003301100001000000000
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................181117.0011720850000000000010100000002012340300000010000000000000000000000002500002002100000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................221113.00113003503011814600010000030012000141341404000000000000000000000000000600100000000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................231111.0011100961000000000000000000000001131400000000000000000000000000000000000004000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................201110.0011040830601541100000000002102022012323030000010000000000010000001001202000004060000000
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................21184.008420571000001000000000000000100371500000000000000000000000000002100000000011100000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................25175.0075008013000000000000033011011071252003000022000000000000000000000200000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................22171.007100440818212000000000010000012775302000001000000000000000000000300000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22169.0069105250010000000000000120012000621301000002000000000000000000011400000000000100000
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18166.006600612000000000001000000000000110000000000000000000000000000000000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................23165.006500320100020000000100000011219952001000000000000000000000000001402000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................18152.005200100322048300000000000000000120402000010000000000000000000000100000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23148.004810390000000000000000000010000010201000001000000000000000000000001100000000000000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................21147.004700391000200000000000000000000100400000000000000000000000000000000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19146.004600170403141000100000000000002015020000000000000000000000000001200010000000000001
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................19141.004100270021000000010000000000000221200000011000000000000000000000100000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT...........................................................................................................................................................................26137.00370020150101000020000001001001133801000033000000000000000000000000000000000000000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................20134.003400153030000000000000010000000621102000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTG............................................................................................................................................................................25133.00330051010000000000000010020122340502000003000000000000000000000100000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTG.............................................................................................................................................................................24128.00280070000000000000001000010010542600000000000000000000000000000001000000000000000
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................18127.002700270000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................22124.002400240000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................18122.002200130010000000000000010000000340000000000000000000000000000000000000000000000000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19121.002100210000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21120.002030115000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................22120.002000160010000000000000000000000100100000000000000000000000000000000000010000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................25118.00180050010000000000000010000000233000000001000000000000000000001100000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................21118.00180001020323000010000000000000002200000000000000000000000000000200000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................20117.00171230000200000000000010020001111100000010000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGTT...............................................................................................................................................................................22116.00160030000000000000000060000000203100000001000000000000000000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................18115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................21115.00150090000000000000000000000010030100000000000000000000000000000100000000000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................21115.001500120000000000000000000000000000000000000000000000000000000000000100000000200000
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................21114.00140030100000000000000001000000212200000000000000000000000000010100000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................24113.00130020110000000000000010000001320100000000000000000000000000001000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................22112.00120030000000000000000040000000310000000000000000000000000000001000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................21112.001200120000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................21112.001200110000000000000000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGGAAAGGGAAAAAGGCGTA.........................................................................................................................................20111.00110021000311000000000000000010000100000000000000000000000000010000000000000000000
.................................................................................................TCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................22111.00110000023000000000000000000000102101000001000000000000000000000000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG........................................................................................................................................23111.00110020030000000000000000000000110301000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................24110.00100002010000000000000000010000101200000001000000000000000000010000000000000000000
.............................................................................................TTTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2419.0090090000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGAT...............................................................................................................................................................................2218.0080000000000000000000070000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................GAAAGGGAAAAAGGCGTA.........................................................................................................................................1818.0080020000103000000000000000000020000000000000000000000000000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGC............................................................................................................................................2018.0080012000102000000000000100000000000000000000000000000000000000100000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC.........................................................................................................................................2218.0080001021100200000000010000000000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTAC....................................................................................................................................................................................1717.0070000000000000000000000000000000000000000000000000000010004200000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGC..........................................................................................................................................2117.0070005000001000000000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1917.0070010000102200000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2417.0070060000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2317.0070000000002000000000010000000020200000000000000000000000000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2416.0060010000000000000000000000100120100000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCAA..............................................................................................................................................................................2316.0060010000000000000000010000000101000000000000000000000000000001100000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTG.........................................................................................................................................2215.0050000010200000000000010000000001000000000000000000000000000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2215.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2015.0050012100000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2315.0050000100101100000000000000000010000000000000000000000000000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................2015.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TCAAA------A-TA-A-------TATTTGATCTAACTGAATCG--------------ATTT-----TTA------TATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGACGTTTTATT-GAACAACGGCAGGGAAGGGAAAAAGGCGTATTTACTATGAATTATTTCAACGA------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................TGTCTTTTTCCGCTTACTGACG...............................................................................................................................................................................221168709.00168709149592165959168415556627
...............................................................................................TGTCTTTTTCCGCTTACTGACGT..............................................................................................................................................................................23130005.00300051307343190126152471038
................................................................................................GTCTTTTTCCGCTTACTGACG...............................................................................................................................................................................21110284.001028410239000441
...............................................................................................TGTCTTTTTCCGCTTACTGAC................................................................................................................................................................................2116406.006406567007770319
...............................................................................................TGTCTTTTTCCGCTTACTGACGC..............................................................................................................................................................................2312272.0022723400122343
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................2011945.001945172718151868
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGTA.........................................................................................................................................2211700.00170017923111269227
...............................................................................................TGTCTTTTTCCGCTTACTGACGTT.............................................................................................................................................................................2411340.001340682295754275
................................................................................................GTCTTTTTCCGCTTACTGACGT..............................................................................................................................................................................221813.00813778000341
...............................................................................................TGTCTTTTTCCGCTTACTGACT...............................................................................................................................................................................221718.00718689514262
....................................................................................................................................GGCAGGGAAGGGAAAAAGGCGTA.........................................................................................................................................231637.006371690057240
................................................................................................GTCTTTTTCCGCTTACTGAC................................................................................................................................................................................201459.0045945500040
.................................................................................................TCTTTTTCCGCTTACTGACG...............................................................................................................................................................................201444.00444429010131
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGT..........................................................................................................................................211399.0039921911167110
...................................................................................................TTTTTCCGCTTACTGACG...............................................................................................................................................................................181381.003812621001180
...............................................................................................TGTCTTTTTCCGCTTACTGACA...............................................................................................................................................................................221370.00370348423121
..................................................................................................CTTTTTCCGCTTACTGACG...............................................................................................................................................................................191348.00348292201530
...............................................................................................TGTCTTTTTCCGCTTACTGACGTC.............................................................................................................................................................................241152.00152281001212
................................................................................................GTCTTTTTCCGCTTACTGA.................................................................................................................................................................................191151.0015114900020
...............................................................................................TGTCTTTTTCCGCTTACTGACGA..............................................................................................................................................................................231149.0014913910180
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................191142.0014213701031
..............................................................................................TTGTCTTTTTCCGCTTACTGACG...............................................................................................................................................................................231140.0014013700030
...................................................................................................TTTTTCCGCTTACTGACGT..............................................................................................................................................................................19186.008614100692
...............................................................................................TGTCTTTTTCCGCTTACTGACGG..............................................................................................................................................................................23185.008557100270
...............................................................................................TGTCTTTTTCCGCTTACTGACC...............................................................................................................................................................................22182.008214011660
..................................................................................................CTTTTTCCGCTTACTGACGT..............................................................................................................................................................................20171.007128000412
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18164.00646300010
....................................................................................................TTTTCCGCTTACTGACGT..............................................................................................................................................................................18155.005523000320
...............................................................................................TGTCTTTTTCCGCTTACTGACGTTT............................................................................................................................................................................25153.005340100111
................................................................................................GTCTTTTTCCGCTTACTGACT...............................................................................................................................................................................21153.00535300000
.................................................................................................TCTTTTTCCGCTTACTGACGT..............................................................................................................................................................................21147.00473601091
................................................................................................GTCTTTTTCCGCTTACTGACGTT.............................................................................................................................................................................23143.00433800050
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCG...........................................................................................................................................20133.0033100001310
...............................................................................................TGTCTTTTTCCGCTTACTGAA................................................................................................................................................................................21132.00323200000
...............................................................................................TGTCTTTTTCCGCTTACTGACGTA.............................................................................................................................................................................24130.00302420022
...............................................................................................TGTCTTTTTCCGCTTACTGAT................................................................................................................................................................................21128.002811001160
................................................................................................GTCTTTTTCCGCTTACTGACA...............................................................................................................................................................................21125.00252500000
..................................................................................................CTTTTTCCGCTTACTGAC................................................................................................................................................................................18124.00241900050
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................20121.00211511040
....................................................................................................................................GGCAGGGAAGGGAAAAAGGCGT..........................................................................................................................................22120.00203000152
......................................................................................................................................CAGGGAAGGGAAAAAGGCGTA.........................................................................................................................................21120.00204000151
...................................................................................................................................CGGCAGGGAAGGGAAAAAGGCGTA.........................................................................................................................................24119.00191000180
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGTAT........................................................................................................................................23117.0017400049
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGTAA........................................................................................................................................23116.0016500056
......................................................................................................................................CAGGGAAGGGAAAAAGGCGT..........................................................................................................................................20115.00151400010
...................................................................................................TTTTTCCGCTTACTGACGC..............................................................................................................................................................................19114.00140000140
..............................................................................................TTGTCTTTTTCCGCTTACTGACGT..............................................................................................................................................................................24113.00131000030
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGTT.........................................................................................................................................22113.0013300073
...............................................................................................TGTCTTTTTCCGCTTACTGACGTG.............................................................................................................................................................................24113.00131000030
..............................................................................................TTGTCTTTTTCCGCTTACTGAC................................................................................................................................................................................22112.00121000020
....................................................................................................................................GGCAGGGAAGGGAAAAAGGCG...........................................................................................................................................21111.0011100055
.....................................................................................................................................GCAGGGAAGGGAAAAAGGC............................................................................................................................................19111.0011200036
................................................................................................GTCTTTTTCCGCTTACTGACGC..............................................................................................................................................................................22110.0010200080
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGC..........................................................................................................................................21110.00100000100
.................................................................................................TCTTTTTCCGCTTACTGAC................................................................................................................................................................................1919.009900000
....................................................................................................TTTTCCGCTTACTGACGC..............................................................................................................................................................................1819.009000090
...................................................................................................TTTTTCCGCTTACTGACGTT.............................................................................................................................................................................2018.008300050
.......................................................................................................................................AGGGAAGGGAAAAAGGCGTA.........................................................................................................................................2018.008200060
..................................................................................................CTTTTTCCGCTTACTGACGC..............................................................................................................................................................................2017.007000070
....................................................................................................................................GGCAGGGAAGGGAAAAAGGCGTAT........................................................................................................................................2417.007000061
.....................................................................................................................................GCAGGGAAGGGAAAAAGGCGTC.........................................................................................................................................2217.007000070
...............................................................................................TGTCTTTTTCCGCTTACTGAAA...............................................................................................................................................................................2217.007700000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................2016.006600000
...............................................................................................TGTCTTTTTCCGCTTACTGAG................................................................................................................................................................................2116.006300030
...................................................................................................................................CGGCAGGGAAGGGAAAAAGGCGT..........................................................................................................................................2316.006100050
...............................................................................................TGTCTTTTTCCGCTTACTGACAC..............................................................................................................................................................................2315.005000050
droGri2
TGTAT----AA-GTA-T-------TGTA----------------------------T---GA--T-TAAGCAATC-TTCAGAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATGTAATCAACAAAC-----------C------TATTC---------------------AAATATCTAT-----AA-------AGCT--------------AGAA-CAACTGGTGAGTA--ACCCTCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2215550.0055505369181
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................211487.004874870
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................231473.00473288185
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................211389.003893863
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................201146.001461415
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................221102.001026042
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18140.0040400
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................19136.0036360
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................24133.00331914
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................20126.0026260
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................22123.0023230
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20119.0019190
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18118.0018180
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................21113.0013103
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................22110.001091
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2319.00972
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................1918.00880
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2318.00853
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2317.00752
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2317.00770
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................1817.00770
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................2317.00743
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................1916.00660
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2116.00660
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2215.00550
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................2514.00422
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2013.00321
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2313.00321
......................................................................................................................................CAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2013.00330
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2213.00321
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2113.00330
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................2413.00321
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................2112.00220
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2012.00220
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................2412.00211
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................1912.00220
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2212.00220
.......................................................................................................................................AGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2011.00110
......................................................................................................................................CAGGAAAGGGAAAAAGGCG...........................................................................................................................................1911.00110
...............................................................................................TGTCTTTTTCCGCTTACTGGCGCC.............................................................................................................................................................................2411.00110
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1811.00110
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2011.00110
..................................................................................................CTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2011.00110
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAAG.......................................................................................................................................2411.00110
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................2311.00110
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................2111.00110
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTTG........................................................................................................................................2311.00110
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................2111.00110
..................................................................................................CTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2111.00110
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2311.00101
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2211.00110
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1911.00110
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2211.00110
...............................................................................................TGTCTTTTTCCGCTTACTGGCGGA.............................................................................................................................................................................2411.00110
.........................................................................................................................................GAAAGGGAAAAAGGCGTAA........................................................................................................................................1911.00110
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................2211.00110
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAAG............................................................................................................................................................................2511.00110
..................................................................................................CTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2011.00110
dp5
TAAAT------A-TA-T-------TGTA----------------------------AAA-------TATACAAAGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCC------AATTCAGCTTAATA-------------------------------------------------------------ATAGGTGAGTACATCCCCASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22158028.005802839501481637236322014286542823768
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................21113516.0013516361202761950013761477766
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................20112269.00122694117062871431932476250
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2318815.00881506679641574962586415371
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2114277.0042770427021300010
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2212920.002920012466601038212130147963
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201941.00941093812000000
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................191898.00898089800000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................241531.005310408365262234000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................211423.004230231450011945739
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................221386.00386038410001000
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................191340.00340032854300000
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................191276.002763723231110010
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................181222.00222020813600400
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................201219.00219021531000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................231210.00210019300257120
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................221198.00198017760644010
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................221195.00195117410738010
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................231190.0019001514917333000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................231180.001800609215065110
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................211179.00179016921025000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................211134.001340118100002130
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................251118.001180100101311200
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23189.008908710100000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23172.007207200000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20165.006504830205610
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................21164.006406301000000
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18162.006205912000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22162.006208424125000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19157.005705511000000
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18152.005205100000010
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................18141.004104100000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................23141.004102810013080
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................20139.003903431001000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19137.0037016122310300
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................24134.003402500106020
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................19128.002802313001000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................20125.002512200101000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................23123.002302200100000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................22122.002201730000101
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................21121.002102100000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................22121.002101610101020
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21120.002002135000000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................18120.002002000000000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................22120.002002000000000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGT..........................................................................................................................................20118.001801500000300
.......................................................................................................................................AGGAAAGGGAAAAAGGCGTA.........................................................................................................................................20118.001801700001000
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................18115.001501500000000
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................22115.001501500000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................22114.001401400000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................23114.001401000000031
....................................................................................................................................GACAGGAAAGGGAAAAAGGC............................................................................................................................................20111.00110620003000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................21111.001101001000000
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................20110.001001000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2119.0090810000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................2419.0090270000000
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2119.0090900000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2418.0080800000000
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................2018.0080521000000
................................................................................................GTCTTTTTCCGCTTACTGGA................................................................................................................................................................................2017.0070700000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGC..........................................................................................................................................2117.0070070000000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................2117.0070700000000
................................................................................................GTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................2417.0070700000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................2517.0070600010000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................2517.0070700000000
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1916.0060500001000
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................1816.0060300102000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2316.0060510000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................2416.0060600000000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2015.0050041000000
..................................................................................................CTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2115.0050410000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT...........................................................................................................................................................................2615.0050400001000
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................2114.0040200101000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2314.0040120000010
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTG............................................................................................................................................................................2514.0040400000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC.........................................................................................................................................2214.0040020002000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2414.0040210100000
...............................................................................................TGTCTTTTTCCGCTTACTGGTT...............................................................................................................................................................................2223.5070700000000
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................2213.0030300000000
...............................................................................................TGTCTTTTTCCGCTTACTGGTA...............................................................................................................................................................................2213.0030300000000
..................................................................................................CTTTTTCCGCTTACTGGCA...............................................................................................................................................................................1913.0030300000000
......................................................................................................................................CAGGAAAGGGAAAAAGGC............................................................................................................................................1813.0030300000000
.................................................................................................TCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2213.0030210000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2413.0030300000000
droPer2
TAAAT------A-TA-T-------TGTA----------------------------AAA-------TATACAAAGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCC------AATTCAGCTTAATA-------------------------------------------------------------ATAGGTGAGTACATCCCCASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22112477.001247730610160883507518103
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2111953.00195314916648428226
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2311886.00188631296135164164124
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2011433.0014332113561121159
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................211814.0081408140000
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................191206.00206185153111
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................221146.00146432611390
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201131.0013101310000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................241101.00101058914137
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................19185.00850850000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................23179.007905911171
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................22168.00680670100
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................19148.00480480000
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................22146.00465331520
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20137.00370370000
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................22133.00330300120
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18131.00312270011
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................25127.00270162072
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23120.00200180011
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18120.00201190000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................23119.00190230113
....................................................................................................................................GACAGGAAAGGGAAAAAGGC............................................................................................................................................20118.00180110016
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................21118.00180140130
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................23113.0013180130
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................21111.00111000010
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23111.00110110000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19110.00100100000
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2219.009090000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................2218.008041030
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2118.008080000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................1918.008010007
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................2417.007020140
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................2117.007070000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2316.006000015
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2016.006020004
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................2116.006060000
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................1815.005050000
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1915.005000005
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2115.005041000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2114.004000004
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2214.004020002
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2413.003000003
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................1813.003120000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................2513.003020010
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................1813.003030000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................2513.003010020
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................2013.003020010
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................2412.002010010
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT...........................................................................................................................................................................2612.002010010
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................2112.002020000
........................................................................................................................................GGAAAGGGAAAAAGGCGTA.........................................................................................................................................1912.002000002
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2012.002020000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2112.002020000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2212.002020000
.................................................................................................TCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2212.002010100
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1912.002020000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2312.002020000
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................2012.002020000
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................2211.001010000
...............................................................................................TGTCTTTTTCCGCTTACTGGCAC..............................................................................................................................................................................2311.001010000
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2111.001010000
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2211.001010000
...............................................................................................TGTCTTTTTCCGCTTACTGGTT...............................................................................................................................................................................2221.002020000
....................................................................................................................................GACAGGAAAGGGAAAAAGGT............................................................................................................................................2011.001000001
.....................................................................................................TTTCCGCTTACTGGCGTT.............................................................................................................................................................................1811.001001000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2311.001000001
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTGA............................................................................................................................................................................2511.001010000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGGC.............................................................................................................................................................................2411.001010000
droAna3
AAC---------------------------------------------------------AT-----ATA------TTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGT-------CAAAGTCTAAATTAA---AAAAT-----------GTC-----------------------------------------------------------ATCATCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22119287.001928716815447189751454631
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................20110371.001037110172830143072
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2115346.005346498021316312779
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2313307.003307179724335208908116
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2111394.001394139010201
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................191667.0066766700000
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................221495.0049544712171612
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................221405.0040517814255678
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201353.0035335300000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................241264.00264139140137721
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................191228.0022822401012
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................181151.00151480238810
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................211145.0014513701223
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................221114.001149920418
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................221112.0011211020000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................23183.008355107119
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................25170.007040005214
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................23169.00693610500
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20167.00676610000
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................19163.00636010200
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................21163.00635900004
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................23154.0054112240116
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................21151.0051231701100
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18138.00383170000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................20137.00373400012
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19136.003611500191
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18136.00363600000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23133.00333300000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................21133.00333300000
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................18131.00313100000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20130.00302110071
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................19124.00245000190
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18123.00232300000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19123.00232210000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22120.00208120000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................24119.0019800362
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................22119.00191030042
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................25117.00171100150
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................21117.00171430000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGT............................................................................................................................................19216.003217000150
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................23114.00141111010
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23113.00131300000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................23113.00131010020
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................21112.0012900030
...............................................................................................TGTCTTTTTCCGCTTACTGGTT...............................................................................................................................................................................22112.00121100010
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................20111.00111100000
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................21111.00111100000
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................18111.00111100000
................................................................................................GTCTTTTTCCGCTTACTGGA................................................................................................................................................................................20110.00101000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................24110.0010400114
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2119.009900000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2219.009900000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2218.008610010
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2018.008610001
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2318.008510011
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................2117.007600001
....................................................................................................................................GACAGGAAAGGGAAAAAGGC............................................................................................................................................2016.006010050
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................2116.006330000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2016.006330000
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2215.005500000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAG............................................................................................................................................................................2515.005500000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGA............................................................................................................................................1915.005100130
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................2215.005400001
...................................................................................................TTTTTCCGCTTACTGGCGC..............................................................................................................................................................................1914.004040000
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1914.004300100
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................2014.004400000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2414.004130000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1814.004220000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTA...........................................................................................................................................................................2614.004400000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................2514.004100111
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................2414.004220000
...............................................................................................TGTCTTTTTCCGCTTACTGGAC...............................................................................................................................................................................2213.003020001
...............................................................................................TGTCTTTTTCCGCTTACTGGTA...............................................................................................................................................................................2213.003300000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTAT...........................................................................................................................................................................2613.003300000
...............................................................................................TGTCTTTTTCCGCTTACTGGCAG..............................................................................................................................................................................2313.003300000
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2113.003300000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTG............................................................................................................................................................................2513.003300000
...............................................................................................TGTCTTTTTCCGCTTACTGGCTG..............................................................................................................................................................................2313.003300000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT...........................................................................................................................................................................2613.003300000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCTA..........................................................................................................................................2113.003000003
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2213.003210000
................................................................................................GTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................2212.002200000
........................................................................................................................................GGAAAGGGAAAAAGGCGTA.........................................................................................................................................1912.002110000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGC..........................................................................................................................................2112.002020000
droBip1
A-------TA---------------------------------------------------C-----ATA------TTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGA-------CAACGTCTAATTTAG---AACAT-----------GTC-----------------------------------------------------------ATCATGSizeHit CountTotal NormTotal
No Reads
droKik1
A-------TATAGTAT--------------------------------ATA---TACAGTGTAACGTCTA------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCATCAAGCTAT---CTG---------TATTCTG----------------------------T-----GA-------TATA--------------TGAATGTACAGGTGAG----------SizeHit CountTotal NormTotal
No Reads
droFic1
TGTTCGGATCT-GTAT-------GTGTC--------------GGATAGACT---AAAAGTTA-----ATG------CAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGAAGTTTTATTTGAACAACGTCAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGGCCATCAGTTTCA---CCT-T-----------CAACGGAGCA-ATGTGTCCACT-----CCTCTT----CG-------TTA------------------------AGGTGAGTATGCCCCAASizeHit CountTotal NormTotal
No Reads
droEle1
A---------------------------------------------------------GTGT-----ATA------CAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAAAAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGACCAGCAATTTGCACCCAATCAAGCTA------TT----------------------------GA----CA-------TCC------------------------ATGTAAGTAT-------SizeHit CountTotal NormTotal
No Reads
droRho1
A---------------------------------------------------------GTGT-----ATA------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATT-GCAAGTAATAAAGCTA------TC----------------------------TG----CA-------TTC------------------------CTGTAAGTATGTTCCCASizeHit CountTotal NormTotal
No Reads
droBia1
A---------------------------------------------------------GTGT-----ATA------CGT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTACACAACGACAGGAAAGGGAAAAAGGCGTATTTACTACGAGTTTGACCAACGATTTGCAGGTGACTC-----------------------------------------TC----GA-------TCG------------------------GTGCAAGTGCAGGAAAGSizeHit CountTotal NormTotal
No Reads
droTak1
TCAGA---TCG-GTAT--------------------------------TTGCCTAAAAGTGT-----ACA------CAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATATTAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATTTC--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
A-------TAT-CA--------------------------------------------GTGTACTATATA------TCT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTTGCCAACGATTCGCAGTTGGTCATT-----------------CT-----------AAA-----------------------------------------------------------CACCTASizeHit CountTotal NormTotal
No Reads
dm3
A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCAGCGATTTGCAGGTGATCCAGGTG------TATATAGTA-------------------------------------------------------------TT-AGTAAGTAT-----TTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................221269142.002691420010934107631731305001130264161170290401034264386051104061251670763669383103543682225090471360348880164031055662650001408034000000000000000000000451631291801007644181122253212248613823812110268457123205712281271889267317524327388354114913350664544931337500005274771133191195946636774226513294024539758147500000040040849949059453741708284866408860872200200021922309118610103381540131521398103000002812140030217001455419602251335007210103646058148763520973878381067700010100123014081966300830123004353319260040020600000300108300016627280119451492388135241538988600000319454398493112587863544543853077615740457875305368202584810271728100000100003821527883291001621712101007
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................23185039.008503900000300260010100010413287981100016897000592259312112173145605403801051907029629056614958000755622000000000000000000000304293600055207251447126405282660000331941344126036120306933069444520000434011034922021225424422421179238110726513300000000000115114083109611027316326111001003116803415082891332457726916600000138872542034000113444551126198118172110308770278471715177423100001000010737851112240002208200131003002700000202002000035317032411151557349536621260010012225320520125975949359052346776167451173469316478560260810772280000000400015371366023261014577686000009
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................21150168.0050168000021000511103014202229115600033695119230449698835822293062138832371858126147197000113892000000000000000000000063011000742620245711216400334182150060191715101401415421316401166920961051498109004611334610200061254422491284172213250000000000020533202005469138610631417137210000022129152717000220142300001430000000002771188160161462367763288524736995786279738370001000018120603610017983062706000003800000000001000040147821181321610400000644610091046301707487149242531018200126486800000000000613111240635065000005
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................20124999.002499900001100000020100100267232000000000021017301923198410117973743504200011173260000000000000000000001000000060138105265000494870010176011192113241111287200371371660013001100000001341566305645200000000000149268010401481161084616761799000002271913186000804900010000000000006021954752020381310632280224351411265157700000000460172001791820140000004000000000000000281309351110115105000006248118171071350573651122010001133320000000000048956224294452001000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................22119133.001913300001100390020200000147430000100000010231461311123113120641461114221100000000000000000000000000033019057000374106331231207149802830010255120280310400004000202000007100000027126515854704313329232400000000000181802010421813112035226000014417144507003563077602000739018126260002261078309701929990122534839221236112862900005200303506000002740100000010000000000000001810932125302091410100000232127019436190718133742302701923001293034950000006001091104986118561371000011
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2314934.004934000000000000100000002319000000000003917159030105649621593946310000000000000000000000000000000000000050022140002010000000000000222020524016319250000002020000001871161523163450000000000040560300028200370330510000001153122102000331111000004600000000022111326717130515235894193982470000680042082600003819032000004000000000000000301983021332218281620000042485567010107015521226221901012001210340000000000012112013281725000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2414337.0043370000000000000000010015240000000000004105643155132698411315610600015820000000000000000000000002100000100011301000000000000010001401020502021000000000000300251814201451410936140000000000026040023030500080000214411281600021126200000470000000004931746616566941963645798200000000383506300009002000001000000000000000136564726172158400000891881943556450284981293431040380074741430000002000025926255245240000014
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2112977.0029770000000000000000000032010000000000067153207212593102400000000000000000000000000000001500031301015310232000000000000001000000000000000000000000000113119189526630000000000011011001010112400000245251100070513010008210111300008514650118174208164583207280156141000000000200000003001000000000000000000000017282123200000100030110158712200000182029010000000007132017720000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2311441.00144100000000200000000000001000001000000001212021324011210000000000000000000000000000210892900050700053200020000070010831500000000001010000000000000000385424111400000000000000302000121110000000007313200021352000007500000000030142274434436615625515822000000005700000002001000000000000000000000050715050000002109828410037826100100343458000000200001078817000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................2211227.0012270000000000000000000021230000000000081715203331372166900417310000000000000000000000000000000000001000000270011010000000000021720000030151613000000100000000653142250101000000000004105000103030000000037282000603000000420000010004164114358116735312542000000001120131000038909000001000000000000000626912132128000002167028850961100604200254000000000004362003000001
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2211055.001055000022000401000000000101100000000000315351711252002140200000000000000000000000000000000000001100111001103000000000302041000311020720000000000000001001262010000000000000660100630106010000000298131000200200000000000000004283188410121725010536680000410002020000010140170000000000000010000006232105374170000033020510027603101100133000000000001020002000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................241813.008130000000000000000000000000000000000002201056132302390100000000000000000000000000000000000000000001000001000000000000111000110000110000000000000002323655402400000000000130200020006030000003104610003050000001100000150007197151217293414814190000010040024000043020000000000000000000003272153367140000011111213143905133071411018170081130000000000003766131715000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................231767.0076700000000000000000000100100000000000003330021901810163100200000000000000000000000000000000000200000001000000000000000000010100010002011000000000010000134216100000000000000032010011000110000000243220001030000001100010000052049711944245150000000054022000032020000000000000000000002310174825410000033341987906222373604200357000000000003011104000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................231572.0057200000000001000000000001000000000000001000010102001000000000000000000000000000000000020002030000410322170000000000002000000100000000000000000000002414151000000000000003100001200020300000013132000006100000250000000006237173240287933513514000071000000000000100000000000000000000000001302030300000010020200011210001000468000000000000124564000007
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................251567.00567000000000000000000000133000000000000000121370315105610000541000000000000000000000100000000000000000000000000000000000100000000000000000000000000035524860260000000000000100001000010100000008370000601000000210000000005767715131413961714000000002201000002000000000000000000000000060341105000000010035402534110430048310000000000001021502000000
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................191549.005490000000000000000000000080000013701011132026011001001010004320000000000000000000000000000000100003620113100000000000202000000005022008800002000000101213200000000000000041102003714020120000076300000300000000000000000002101211141517181823850000000000035000011180500000100000000000000043105310015000008510180201061100301000221000000000004641143000000
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................211503.00503000000000000000000000000000000770102200100424020035000000000000000000000000000000000000000000000000000000000000000002100001207179000000002000000015206500210000000000016806009908031800000023100000010100000000000000000974420251054293136000000001100000003003000000000000000000000316031143500000000003000001001000000106000000000000020100000000
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................211435.00435000000000000000000000016000000000000111102801001002000000000000000000000000000000000000000000002210000010000000000000120001310302600000000000000021100900000000000000034030004000202000000002100001000000000000000000023112556112234609220000000000012000091207000001000000000000000240404010000021140001081500100100031000000000005912101000000
.....................................................................................................TTTCCGCTTACTGGCGT..............................................................................................................................................................................171389.0038900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093712521700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................241383.003830000000000000000000010000000000000020010014021001010000000000000000000000000000000000000000000000000000000000000000020000021020220000000000000002000113002000000000000270200020108040000004330000000200000002000000000051452098810990000000000026000036040000010000000000000006152181132100000017821240010044815101000113000000000003463403000000
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................211373.0037300000000000000000000000400000000000000020111040000540000000000000000000000000000000000000000100000000000000000000004032030204010020000000000000000010090000000000000002803005001030100000007000000000000000000000000000022120415103251815000013100000110000422010000010000000000000000101000100000606401000301000000000100000000000031100010000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................231340.00340000000000000000000000110000000000000000000003100010000000000000000000000000000000000000000100001010100000000010000000000000000000000000000000000010013001000000000000220000000000000000000001000020500000050000000000210252624237429322719000032000000000001001000000000000000000000030002000000000000001000112100000034000000000000000133000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................201330.0033000000000000000000000200000000000004100002010311000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301230000000000000000101000000000040000021041300000000000100030000001311829141810372139570000000000000000001000000000000000000000002301024010000000101010000201001000125000000000005113302000000
...............................................................................................TGTCTTTTTCCGCTTACTGGATC..............................................................................................................................................................................231311.00311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025556000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................221291.00291000000000000000000000000000000000000000312001000001020000000000000000000000000000000000000000010000000100000000000001000000003001000000000010000120014320000000000000017020010000000000100300100000000000000000000000029061214815365140000000002010000051020000000000000000000002191502301100000101115020316530100000000000000000000000120000000
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................191256.002560000000000000000000000040000000000000000110010001000100000000000000000000000000000000000000000000100000000000000000021000000000010000000000000002323266000000000000000010200020100000000001200000000000000000000000000338152200010100000000000200000001000000001000000000000000312286135100000010010200000500000000102000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................221231.002310000000000000000000000100000000000001100100021000001100000000000000000000000000000020000001000000000100000000000000000000000000000000000000000000000182000000000000000101000000000300000012041000101000000011000040000121461291094081246000000000000000000000000000000000000000000030000000000000001010000112000000564000000000003212012000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................251212.00212000000000000000000000010000000000000000100000300000000000000000000000000000000000000000000000000200000000000000000003000000003024000000000000000000108000000000000000330300120400050000001031100001000000000200000000003210146113200000000000130000140200000200000000000000025131536000001249130210005711110000031000000000003312237000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................181183.001830000000000000000000000000000000000000000001010001010000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000001001215000000000000000010000000000001000000000000000100000000000000000462150014000000000000000000000000100000000000000000000000030001000000001054008000030150003400000000000225165111311000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATC.......................................................................................................................................241161.0016100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................181158.00158000000000000000000001604000000000001000010101002101000000000000000000000000000000000000000000000000000000000000000000200000000010000000000000000010114800000000000000000000002010000000000022000004000000000000000000021522022010644000000001200000001000000000000000000000000010103010000010000000010000000200002000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................221149.001490000000000000000000001000000000000001001201020201010000000000000000000000000000000000000000000000000000000000000100000000102010000000000000000000102019000000000000000120200010000030000004500000000020000000000000000021292712655000000001100000000000000000000000000000000270021040000000000612001502201200024000000000000010100000000
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................181142.00142000000000000000000000001000032000100000100001000000000004100000000000000000000000000000000000000210000000000000000000100000001800008160000000000000001300000000000000000022010203200300000410000000000000000000000000034143116300110000000001000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................231138.0013800000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000011000102000000120100000000000000000000000024951211701230000000000000000010000000000000000000000003313210290000015200714043305201300110000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................201126.0012600000000000000000000000000000000000000100000600101100000000000000000000000000000000000001010000010000000000000000000320000000503870000000000000000010110000000000000000010100000100000000002000000000000000000000000000000054150302000000000000000003402000000000000000000000000103000000001000000010000000000000000000000002110011000000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................181116.001160000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100090000000000000000000000000000200000000010000100200000000000000001037212100100000000000000000000000000000000000000000000000010011000000000000200000000100000010000000000000000000000000
....................................................................................................TTTTCCGCTTACTGGCG...............................................................................................................................................................................171113.00113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624384301010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201112.001120000000000000000000000010000100000010000000100000000000000000000000000000000000000000000000000000000000000000000000012000021020020000000000000000000020000000000000005201000301120100000000000000000000000000000000000000141650516119000010000000000000101000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................221108.0010800000000010000000000000000000000000000000000101001000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000100100000000000000000000000000000000000020200000046000000000000000061321467135337000000000000000000000000000000000000000000000101000000000001000001200000000602000000000000001001000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTCA..........................................................................................................................................................................271108.0010800000000000000000000002900000000000000010001010000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000200220000010000000000000000000000000000000000000000000000000000000001000000304000000005300000000000000001100000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................211108.00108000000000000000000000000000000000010100000001020012000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000005000000000000000000000000000000000000000110000500000002000000000461856395641000000000000000000000000000000000000000000001210020000000001100010000000000724000000000000001103000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................25197.0097000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000002106020100000000000110000010200000000000301000000000000000000000000192123031111000000000001000000100000000000000000000000142421020000024110100011225100200023000000000001001000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTC...........................................................................................................................................................................26191.009100000000000000000000002400000000000001010000000100000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000541332110000000000000000000000000000000000000000000100000100000001000000000000000003500000000000000010100000000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................24182.00820000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001100020000000000000000001000000000000000001010000000000000010000000000730395136542000000000000000000000000000000000000000000010000000000000006000010102000000021000000000000001000000000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................20181.0081000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000100201200000000000000000000000010000000000001000002000000000000000000001166010000000000000020000000000000000000000000000000000100000100000000104000000100001000150000000000000001000000014
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19171.00710000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000001250000000000000000000000000000010000001100100000002000002000000006621011110001000000004200000000000000000000000000000000010003000000000000100000000000000010020000000002012210100000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................24169.0069000000000000000000000000000000000000200000200000112000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020006000000000000000000000000000000000000010000000000000000000000000372020220022000020002000000000000000000000000000000000000102010000010000700001312000200101000000000003000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................23157.0057000000000000000000000000000000000000000000011100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100030000000000000000000000000000000000000000000200000001000000000172201232011000032000000000000000000000000000000000000011200000000000001020000110000000003000000000001000014000000
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................19156.0056000000000000000000000010000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000430500000000000000000000000000000000000000000000000000000203200000000010000000200000100101000000000006041365000000
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................19155.00550000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000110021000000000000000000000001000000000000001000000000000000000000000033510110001000000003000000000000000000000000000000000000200020000000000101000000000000030000000000000000000000000
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20154.0054000000000000000000000000000000000000000000001010002000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000008100000000000000000000010100000000000100000020000000000000000000410000140200000000005100000001000000000000000000000000120211000000031000200000000000100000000000000000110000000000
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................19145.0045000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000110200010002000000003000000000000000000000000000001137104921000000000000000000001000000000000000000000020000000000000000000000000000000000000000000000000001000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAC.............................................................................................................................................................................24142.0042000000000000000000000000000000000000000001300001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000001000000000000000000000000000000000000010004130114000062000000100001000000000000000000000000020000010000000100000010100000000000000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................24142.0042000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000011104052630000000000000000000000000000000000000000000000002000000000001000000122000000101000000000000020001000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAAA............................................................................................................................................................................25138.0038000000000000000000000000000000000000100001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000002000000000000000000000100102000000000000000000000000000000000000020000010000000000000001000001202000000000000000000000011000010000000540000000100000000002000000000000110000000000
.....................................................................................................TTTCCGCTTACTGGCGTT.............................................................................................................................................................................18137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051181300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................24135.0035000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000300000000000000000000000000000000010000000000000000000000000000000000000001000000300000000000000000010021060306000000000000000000000000000000000000000000000100000000000000000000001000000010000000000000000102000000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................21131.0031000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000131832113000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................20131.0031000000000000000000000001000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000010100000000000000000000000000000000000000000020100100002010000006000000000000000000000000000000003001201000000000001000000000000000000000000000000020100010000000010000000000000000000000000000000000000000000
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18131.00310000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000110000000000000000110000010100000000000000000000000000000000000000022200100000000000000000000000000000000000000000000000010000000000011000001000000000000001000000000000000100000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA...........................................................................................................................................................................26128.0028000000000000000000000000000000000000000000201000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000010000000000000000000010001311000000000000001000000300000000000000000000000020001000000022000000000000000000001000000000000001000000000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................20128.0028000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000002000000000000000010000000001000000001000000000000000000000000000000012471312000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG........................................................................................................................................23128.0028000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010130253125000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000
...................................................................................................................................CGACAGGAAAGGGAAAAAGG.............................................................................................................................................20127.0027000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200008032000000000000000000000000000000000000000000000000000000000000000400110100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000002100000000
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21126.0026000000000000000000000001000000000000001000101000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000001000000000000000000000000000100100010000020000000000000000000000000000000000000003320001000000000000000000101000000000000000000000010000000000000000000000000000000000000000000000000010000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAG............................................................................................................................................................................25125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000011134000031000000000000000000000000000000000000000000100212010000001000000000000001000000000000000000000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTAA...........................................................................................................................................................................26125.0025000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000210001010000001000000000000000000000000000000010000000000000000000000000000000000000000000000000030102000000000200010000200000000000000000000000010002000000
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................21124.0024000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000001000000000000000000000000000020001130021000000000000000000000000000000000000000000200001000000000000010000000200000000000000000000000000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................21124.0024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100010000000000000000000000000000000000000000000022243110000000000000000000000000000000000000000000110001010000000000000000001000000001000000000000000000000000
droSim2
A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCAGGTGATCCAGGTG------TGTATAGTA-------------------------------------------------------------TT-AGTAAGTAT-----TCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22110671.00106714677171481364916162392111111781133244328000
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................1919867.009867665426191542927812314005000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2219056.0090560110640111616415887228219097297000
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2117082.007082208712713469984223131076142303298240000
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2013750.0037502862761491292301310965112614224328000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2111517.0015170001530231224001741266000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2311068.00106846163385535242141262299111000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................231564.005642108900181229321411023000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................231375.00375010110214022340300000
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................181331.0033146032446800015000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................231309.00309001600122110149236000
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................211267.002670012630000002100000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................231255.0025500020101103023224000
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................221236.002361137312160074001811000
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................211113.00113148019004526000001000
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................221111.0011158217004222414303000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................22191.0091000100000000585000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20190.00900141610100101461000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................24182.008200112001694892300000
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................20180.0080000791000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................22175.00750002000000501058000
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................19152.0052000510010000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23148.0048001470000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19133.00330000132000018000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................24129.0029000600611131100000
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................21129.0029650110024000100000
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................20128.0028167030011000000000
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................19128.0028003900000012400000
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20128.0028130220000000200000
.....................................................................................................TTTCCGCTTACTGGCG...............................................................................................................................................................................16127.0027000000000027000000
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18127.0027001800000018000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCTG..............................................................................................................................................................................23126.0026169100000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................24123.002300020098130000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................18122.0022000013200007000000
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................22122.0022000210000001000000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................24121.0021000000100000515000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................21120.0020000100000020215000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................21114.001400040000000019000
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21113.001333040021000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22113.001353100000002200000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................20112.001264020000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................24110.001000000000001036000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................1919.00910080000000000000
....................................................................................................TTTTCCGCTTACTGGCG...............................................................................................................................................................................1719.00900000000009000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................2319.00902120000102100000
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2219.00900090000000000000
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................1818.00841030000000000000
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1917.00700010000005100000
..............................................................................................TTGTCTTTTTCCGCTTACTG..................................................................................................................................................................................2017.00743000000000000000
...............................................................................................TGTCTTTTTCCGCTTA.....................................................................................................................................................................................1617.00700000000007000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2317.00700000010000123000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2016.00600000000006000000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2316.00600000000000015000
...............................................................................................TGTCTTTTTCCGCTTACTA..................................................................................................................................................................................1916.00642000000000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2116.00601020003000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2415.00500000000000014000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2215.00500050000000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAAA.......................................................................................................................................2415.00500010000001021000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................2515.00500010000010102000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2315.00500000000100004000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTG.........................................................................................................................................2214.00400000000000004000
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2214.00400310000000000000
......................................................................................................TTCCGCTTACTGGCGT..............................................................................................................................................................................1614.00400000000004000000
.....................................................................................................................................ACAGGAAAGGGAAAAAG..............................................................................................................................................1714.00400000000004000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGA..........................................................................................................................................2114.00400000000000013000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG........................................................................................................................................2314.00400000000000013000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2314.00400130000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................2214.00410010000000002000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................2114.00400040000000000000
....................................................................................................................................GACAGGAAAGGGAAAAAG..............................................................................................................................................1814.00400002100001000000
...............................................................................................TGTCTTTTTCCGCTTACTC..................................................................................................................................................................................1914.00421000000000100000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC.........................................................................................................................................2213.00300000000010011000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATA.......................................................................................................................................2413.00300000000000021000
...............................................................................................TGTCTTTTTCCGCTTACTGGCTGG.............................................................................................................................................................................2413.00311000000000100000
......................................................................................................TTCCGCTTACTGGCG...............................................................................................................................................................................1513.00300000000003000000
.....................................................................................................TTTCCGCTTACTGGCGT..............................................................................................................................................................................1713.00300000000003000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCA...........................................................................................................................................2013.00300000000000003000
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2113.00300030000000000000
...............................................................................................TGTCTTTTTCCGCTTAC....................................................................................................................................................................................1713.00300000020001000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAAA............................................................................................................................................................................2513.00300020000000001000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1813.00300000000003000000
.....................................................................................................................................ACAGGAAAGGGAAAAA...............................................................................................................................................1613.00300000000003000000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................2013.00320010000000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGAAA..............................................................................................................................................................................2312.00200000000000002000
...............................................................................................TGTCTTTTTCCGCTTACC...................................................................................................................................................................................1812.00201000000001000000
........................................................................................................................................GGAAAGGGAAAAAGGCGTA.........................................................................................................................................1912.00200000000002000000
...............................................................................................TGTCTTTTTCCGCTTACTT..................................................................................................................................................................................1912.00211000000000000000
.......................................................................................................................................AGGAAAGGGAAAAAGGCGT..........................................................................................................................................1912.00200000000001001000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGCCA............................................................................................................................................................................2512.00200000000002000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2412.00200010000001000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTTC...........................................................................................................................................................................2612.00200001100000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATT.......................................................................................................................................2412.00200000000000002000
.......................................................................................................................................AGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2012.00200000000000002000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGGG.............................................................................................................................................................................2412.00201010000000000000
.....................................................................................................................................ACAGGAAAGGGAAAA................................................................................................................................................1512.00200000000002000000
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................1812.00200020000000000000
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................1812.00200010000001000000
...................................................................................................TTTTTCCGCTTACTGGCGA..............................................................................................................................................................................1912.00200010000001000000
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1912.00200001000001000000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2312.00200010000000100000
droSec2
A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCAGGTGATCCA-----------------------------------------------------------------------------------GGTGTGTATAGTATTASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22126782.00267821479788999111185
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2315570.00557019628472586175
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2015359.00535950089834219
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2114633.00463343188877150
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2111195.0011951188061
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2311037.00103771613230159
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................221348.00348511671291
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................191319.00319318001
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................241284.00284876711416
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201278.00278278000
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................211219.0021918010029
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................221139.0013910022215
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................221121.00121918715
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................231114.00114114000
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................221109.00109106021
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................19199.0099851112
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................21192.0092685019
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................24166.00662223120
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20162.006258040
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................19153.005348140
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................22149.004949000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................24148.00481715412
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................23145.004558320
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................21144.004463260
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................23142.0042123234
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18139.003931071
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................25132.003213874
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18123.002323000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................20121.002116401
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................20120.002019001
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21119.001919000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................25119.00197516
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................18118.001818000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................21118.001818000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19118.001818000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................22118.001818000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22117.001711060
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19117.001714120
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................23117.001751110
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................20115.001513002
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................21114.001411120
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................21114.001414000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................23112.00126600
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23112.001212000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20111.00114502
...............................................................................................TGTCTTTTTCCGCTTACTGGAA...............................................................................................................................................................................22110.00107102
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................1819.0099000
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................1819.0099000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2019.0096030
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2219.0099000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................2518.0083401
................................................................................................GTCTTTTTCCGCTTACTGGA................................................................................................................................................................................2018.0088000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2116.0065100
...............................................................................................TGTCTTTTTCCGCTTACTGGTT...............................................................................................................................................................................2216.0066000
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2116.0064020
................................................................................................GTCTTTTTCCGCTTACTGC.................................................................................................................................................................................1915.0055000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAAA............................................................................................................................................................................2515.0052102
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1915.0054010
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2115.0053200
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2115.0055000
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................2014.0044000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................2414.0040031
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2314.0043010
...............................................................................................TGTCTTTTTCCGCTTACTGGCAA..............................................................................................................................................................................2314.0042002
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTG.............................................................................................................................................................................2413.0033000
...............................................................................................TGTCTTTTTCCGCTTACTGGTA...............................................................................................................................................................................2213.0032001
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2413.0031110
..............................................................................................TTGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2413.0033000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1813.0032100
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA...........................................................................................................................................................................2613.0030111
.................................................................................................TCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2113.0033000
................................................................................................GTCTTTTTCCGCTTACTGT.................................................................................................................................................................................1912.0022000
...............................................................................................TGTCTTTTTCCGCTTACTGGAT...............................................................................................................................................................................2212.0022000
...............................................................................................TGTCTTTTTCCGCTTACTT..................................................................................................................................................................................1912.0022000
...............................................................................................TGTCTTTTTCCGCTTACTGGAAA..............................................................................................................................................................................2312.0021100
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2312.0020200
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1912.0020020
....................................................................................................................................GACAGGAAAGGGAAAAAGGC............................................................................................................................................2012.0021100
......................................................................................................................................CAGGAAAGGGAAAAAGGC............................................................................................................................................1812.0021010
...............................................................................................TGTCTTTTTCCGCTTACTGGCCA..............................................................................................................................................................................2312.0020101
droYak3
A-------TCG-GTAT--------------------------------GTG---AAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGACCAGCGATTTGCAGGTGATCAAGGTG-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22218340.503668120527247565624123875252480010
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2023690.50738150604612225617350000
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2123387.50677543345051687106915200000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2322060.504121018861589288476222400025
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2221247.502495032620822407540020
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2121220.502441024251600000000
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................192726.5014531185255413410000
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................192227.004540451300000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................232193.0038601137220010000
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................202181.003620362000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................232130.0026002023260010010
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................212106.5021306214400070000
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................192102.0020401802310000000
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18294.5018901444320000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................22286.0017216132527730000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................24283.00166055791122130004
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................22266.501330126520000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................22261.001221109620220000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................23255.50111192143730000
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................20255.001100103610000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22254.501092109400210000
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18237.0074271100000000
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................21234.0068057901100000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................23227.5055051400000000
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21222.5045024210000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20218.5037092600110000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................21218.0036027900000000
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................21217.5035033110000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23216.5033031110000000
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18215.5031025600000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................23213.0026015610040000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................22213.0026052100000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................24212.5025042000000001
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................18212.0024123000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19212.0024038000130000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................20211.0022012100000000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19210.5021018300000000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2029.0018013500000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGC..........................................................................................................................................2128.5017001700000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................2428.0016011001220000
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1927.5015051000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................2527.5015011200020000
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................1827.5015015000000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2227.501506720000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................2527.0014010011110000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2127.0014013100000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................2327.001409300020000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2226.501304800010000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1826.001206600000000
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................2024.50916101000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCG...........................................................................................................................................2124.00803500000000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2024.00804400000000
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2124.00808000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC.........................................................................................................................................2223.50700700000000
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................2223.50706010000000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................2123.50716000000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2323.50702500000000
.......................................................................................................................................AGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2022.50503200000000
...................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2422.50500500000000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................2222.50505000000000
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2122.50505000000000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2322.00404000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTA............................................................................................................................................................................2522.00402110000000
...............................................................................................TGTCTTTTTCCGCTTACTGGTT...............................................................................................................................................................................2222.00404000000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTG.............................................................................................................................................................................2422.00403100000000
................................................................................................GTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................2222.00402200000000
...................................................................................................TTTTTCCGCTTACTGGCGC..............................................................................................................................................................................1922.00401300000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................1822.00401200010000
..............................................................................................TTGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2421.50303000000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................2421.50300210000000
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1921.50300100020000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................2321.50300300000000
droEre2
GAA-----------AT--------------------------------ACA---CAAAGTGG-----ATA------CAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTCACTATGAGTTTGGCCAGCGACTTGCAGGTGATCAAGGTG------TATGTAGTAT-----------ACC-----------------------------------------------------------CTCTTGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................TGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................22159102.005910251898115288814561017263952
...............................................................................................TGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2019316.0093168767186214782591
...............................................................................................TGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2116963.00696363683492359431210
...............................................................................................TGTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................2315179.0051793393267144230837205103
................................................................................................GTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................2114052.0040524048101020
................................................................................................GTCTTTTTCCGCTTACTGG.................................................................................................................................................................................191546.00546545100000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................221521.00521721290122771021
................................................................................................GTCTTTTTCCGCTTACTGGC................................................................................................................................................................................201473.00473473000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................231437.00437435101000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................231310.003101841121102874
...............................................................................................TGTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................221207.00207142015299120
................................................................................................GTCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................221206.00206204100100
.................................................................................................TCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................201192.00192188310000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................241182.001829914774195
...............................................................................................TGTCTTTTTCCGCTTACTG..................................................................................................................................................................................191160.001601452012100
...............................................................................................TGTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................221147.00147136200180
..................................................................................................CTTTTTCCGCTTACTGGCG...............................................................................................................................................................................191127.00127122401000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGC..............................................................................................................................................................................23180.0080205202330
...................................................................................................TTTTTCCGCTTACTGGCG...............................................................................................................................................................................18175.007565401140
...............................................................................................TGTCTTTTTCCGCTTACTGGT................................................................................................................................................................................21169.006960110340
...............................................................................................TGTCTTTTTCCGCTTACTGGA................................................................................................................................................................................21165.006557010340
..............................................................................................TTGTCTTTTTCCGCTTACTGGCG...............................................................................................................................................................................23155.005555000000
................................................................................................GTCTTTTTCCGCTTACTGGCT...............................................................................................................................................................................21154.005454000000
................................................................................................GTCTTTTTCCGCTTACTGGCGG..............................................................................................................................................................................22154.005454000000
...............................................................................................TGTCTTTTTCCGCTTACTGGG................................................................................................................................................................................21152.005245700000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................21146.0046614002600
...............................................................................................TGTCTTTTTCCGCTTACTGGCC...............................................................................................................................................................................22144.0044201516110
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTA.............................................................................................................................................................................24144.0044230001650
...............................................................................................TGTCTTTTTCCGCTTACTGCG................................................................................................................................................................................21144.004444000000
...............................................................................................TGTCTTTTTCCGCTTACT...................................................................................................................................................................................18135.003533000020
.....................................................................................................................................ACAGGAAAGGGAAAAAGG.............................................................................................................................................18134.003420002930
...............................................................................................TGTCTTTTTCCGCTTACTGT.................................................................................................................................................................................20129.002926000030
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................23125.0025013011100
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCG...........................................................................................................................................20124.002461001700
.................................................................................................TCTTTTTCCGCTTACTGG.................................................................................................................................................................................18124.002424000000
.................................................................................................TCTTTTTCCGCTTACTGGC................................................................................................................................................................................19122.002222000000
...............................................................................................TGTCTTTTTCCGCTTACTGC.................................................................................................................................................................................20120.002016310000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGGG.............................................................................................................................................................................24117.001717000000
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTTT............................................................................................................................................................................25117.001711000600
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT.........................................................................................................................................22115.001520000013
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTAA............................................................................................................................................................................25115.00159000330
.....................................................................................................................................ACAGGAAAGGGAAAAAGGC............................................................................................................................................19115.001521001020
................................................................................................GTCTTTTTCCGCTTACTG..................................................................................................................................................................................18114.001414000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGT............................................................................................................................................19113.001310001200
...............................................................................................TGTCTTTTTCCGCTTACTGGCGAA.............................................................................................................................................................................24113.00136000331
...............................................................................................TGTCTTTTTCCGCTTACTGGCGTC.............................................................................................................................................................................24112.00124100205
................................................................................................GTCTTTTTCCGCTTACTGGCGA..............................................................................................................................................................................22112.001212000000
.................................................................................................TCTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................21112.001212000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA........................................................................................................................................23112.00124000800
..................................................................................................CTTTTTCCGCTTACTGGC................................................................................................................................................................................18111.00118201000
..................................................................................................CTTTTTCCGCTTACTGGCGT..............................................................................................................................................................................20111.00118210000
..............................................................................................TTGTCTTTTTCCGCTTACTGG.................................................................................................................................................................................2119.0099000000
...................................................................................................TTTTTCCGCTTACTGGCGT..............................................................................................................................................................................1918.0085300000
...............................................................................................TGTCTTTTTCCGCTTACTGA.................................................................................................................................................................................2018.0088000000
....................................................................................................................................GACAGGAAAGGGAAAAAGGCGT..........................................................................................................................................2216.0060400200
................................................................................................GTCTTTTTCCGCTTACTGGA................................................................................................................................................................................2015.0055000000
......................................................................................................................................CAGGAAAGGGAAAAAGGCGTA.........................................................................................................................................2115.0054000100
................................................................................................GTCTTTTTCCGCTTACTGCG................................................................................................................................................................................2015.0055000000
................................................................................................GTCTTTTTCCGCTTACTGGT................................................................................................................................................................................2015.0055000000
....................................................................................................TTTTCCGCTTACTGGCGT..............................................................................................................................................................................1815.0053100100
................................................................................................GTCTTTTTCCGCTTACTGGCA...............................................................................................................................................................................2115.0055000000
................................................................................................GTCTTTTTCCGCTTACTGGCGTT.............................................................................................................................................................................2314.0044000000
..............................................................................................TTGTCTTTTTCCGCTTACTGGC................................................................................................................................................................................2214.0044000000
................................................................................................GTCTTTTTCCGCTTACTGT.................................................................................................................................................................................1914.0044000000
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC........................................................................................................................................2313.0030000300
.....................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT........................................................................................................................................2313.0031000200
....................................................................................................................................GACAGGAAAGGGAAAAAGG.............................................................................................................................................1913.0030000300

Generated: 10/20/2015 at 11:18 PM