ID:

dwi-mir-306-2

 Coordinate:

scf2_1100000004945:873736-873799 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.7 -32.6 -32.5

Flybase annnotation

intron [Dwil\GK18348-in]; utr5 [utr5_plus_2209]; pre_miRNA [Dwil\mir-306-2-RM]; miRNA [Dwil\miR-306-2-RA]

No Repeatable elements found

mature

  1. dwi-mir-306-1  scf2_1100000004874:29068-29088 -
  2. dwi-mir-306-2  scf2_1100000004945:873777-873797 -
star

  1. dwi-mir-306-1  scf2_1100000004874:29028-29049 -
  2. dwi-mir-306-2  scf2_1100000004945:873737-873758 -

Sense Strand Reads

TGACAAAAAAGTGACTATACAAAGTGATACGAGTTATCTCTGCCTAAACAGCTCAGGTACTTAGTGACTCTCAAAGAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTGTGTCTGCGGAATGTCAACATCATGTGTGTGTGTGTGTGTGATATAT

*************************************.(((((....(((((((((((((..((((.(((((((...............))))))).))))..)))))).))..)))))....)))))************************************ 		Read size # Mismatch Hit Count Total Norm Total M020

head

 M045

female body

 V118

embryo

 V119

head

 V117

male body
....................................................TCAGGTACTTAGTGACTCTCA........................................................................................... 21 0 2 8714.50 17429 2395 7557 6217 1244 16
....................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................... 22 0 2 8614.00 17228 2440 5674 7349 1751 14
...........................................................................................GAGAGACGCTCTGTACCTAGAC................................................... 22 0 2 2118.50 4237 3535 112 358 180 52
....................................................TCAGGTACTTAGTGACTCTC............................................................................................ 20 0 2 1732.00 3464 1908 541 825 186 4
....................................................TCAGGTACTTAGTGACTCT............................................................................................. 19 0 2 1032.50 2065 1773 172 76 43 1
....................................................TCAGGTACTTAGTGACTCTCAAA......................................................................................... 23 0 2 864.00 1728 91 737 865 35 0
...........................................................................................GAGAGACGCTCTGTACCTAGACT.................................................. 23 0 2 850.00 1700 1364 34 75 173 54
...........................................................................................GAGAGACGCTCTGTACCTGGAC................................................... 22 1 2 582.00 1164 1149 0 0 15 0
...........................................................................................GAGAGACGCTCTGTACCTAGA.................................................... 21 0 2 554.50 1109 997 26 43 25 18
.....................................................CAGGTACTTAGTGACTCTCA........................................................................................... 20 0 2 384.50 769 2 760 7 0 0
.....................................................CAGGTACTTAGTGACTCTCAA.......................................................................................... 21 0 2 259.50 519 1 515 2 1 0
....................................................TCAGGTACTTAGTGACTCTCAAT......................................................................................... 23 1 2 242.00 484 14 263 203 2 2
...........................................................................................GAGAGACGCTCTGTACCTAG..................................................... 20 0 2 234.00 468 430 14 4 8 12
....................................................TCAGGTACTTAGTGACTCTCAAAA........................................................................................ 24 1 2 218.00 436 11 221 204 0 0
............................................................................................AGAGACGCTCTGTACCTAGACT.................................................. 22 0 2 190.50 381 267 9 24 60 21
....................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................... 22 1 2 101.00 202 55 94 38 14 1
....................................................TCAGGTACTTAGTGACTCTCAAAAA....................................................................................... 25 1 2 84.50 169 0 85 83 1 0
....................................................TCAGGTACTTAGTGACTCTCT........................................................................................... 21 1 2 78.50 157 129 9 8 9 2
.........................................................................................TTGAGAGACGCTCTGTACCTAG..................................................... 22 0 2 59.00 118 115 1 2 0 0
............................................................................................AGAGACGCTCTGTACCTAGA.................................................... 20 0 2 58.50 117 104 2 5 6 0
...........................................................................................GAGAGACGCTCTGTACCTAGACC.................................................. 23 1 2 55.50 111 103 2 0 6 0
....................................................TCAGGTACTTAGTGACTCC............................................................................................. 19 1 2 55.00 110 109 1 0 0 0
....................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................... 22 1 2 49.50 99 22 31 43 3 0
......................................................AGGTACTTAGTGACTCTCAA.......................................................................................... 20 0 2 46.00 92 1 46 38 7 0
......................................................AGGTACTTAGTGACTCTCA........................................................................................... 19 0 2 45.50 91 3 50 28 10 0
...........................................................................................GAGAGACGCTCTGTACCTAGAA................................................... 22 1 2 44.50 89 78 2 3 3 3
...........................................................................................GAGAGACGCTCTGTACCTAGG.................................................... 21 1 2 42.50 85 85 0 0 0 0
.....................................................CAGGTACTTAGTGACTCTCAAA......................................................................................... 22 0 2 41.50 83 0 82 1 0 0
............................................................................................AGAGACGCTCTGTACCTAGAC................................................... 21 0 2 36.00 72 57 14 1 0 0
...........................................................................................GAGAGACGCTCTGTACCTAGAAA.................................................. 23 2 2 35.50 71 66 0 1 3 1
............................................................................................AGAGACGCTCTGTACCTAGACA.................................................. 22 1 2 35.00 70 52 4 5 6 3
....................................................TCAGGTACTTAGTGACTCTCACC......................................................................................... 23 2 2 26.50 53 47 3 1 1 1
.....................................................CAGGTACTTAGTGACTCTC............................................................................................ 19 0 2 26.00 52 2 50 0 0 0
....................................................TCAGGTACTTAGTGACTCTCG........................................................................................... 21 1 2 26.00 52 43 5 3 1 0
....................................................TCAGGGACTTAGTGACTCTCAA.......................................................................................... 22 1 2 23.50 47 4 6 26 11 0
...........................................................................................GAGAGACGCTCTGTACCTAGACA.................................................. 23 1 2 22.50 45 15 15 1 8 6
....................................................TCAGGTACTTAGTGACTCTCAAC......................................................................................... 23 1 2 22.50 45 13 21 11 0 0
....................................................TCAGGCACTTAGTGACTCTCAA.......................................................................................... 22 1 2 20.50 41 1 3 32 5 0
..........................................................................................TGAGAGACGCTCTGTACCTAG..................................................... 21 0 2 20.00 40 39 0 0 1 0
...........................................................................................GAGAGACGCTCTGTACCTGGA.................................................... 21 1 2 20.00 40 39 0 0 0 1
...........................................................................................GAGAGACGCTCTGTACCTGG..................................................... 20 1 2 20.00 40 40 0 0 0 0
.........................................................................................TTGAGAGACGCTCTGTACCT....................................................... 20 0 2 19.50 39 38 0 0 1 0
....................................................TCAGGTACTTAGCGACTCTCAA.......................................................................................... 22 1 2 19.50 39 8 2 24 5 0
....................................................TCAGGTACTTAGTGACTCTCAATA........................................................................................ 24 2 2 19.00 38 0 24 14 0 0
....................................................TCAGGTACTTAGTGACTCTCAAG......................................................................................... 23 1 2 18.00 36 0 31 4 1 0
....................................................TCAGGTACTTAGCGACTCTCA........................................................................................... 21 1 2 18.00 36 8 3 21 4 0
....................................................TCAGGTACTTAGTTACTCTCA........................................................................................... 21 1 2 17.50 35 11 5 16 3 0
....................................................TCATGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 17.50 35 12 5 17 1 0
....................................................TCAGGTACTTAGTGACTCTCC........................................................................................... 21 1 2 17.00 34 24 3 4 3 0
....................................................TCATGTACTTAGTGACTCTCA........................................................................................... 21 1 2 15.00 30 4 5 19 2 0
....................................................TCAGGGACTTAGTGACTCTCA........................................................................................... 21 1 2 14.00 28 3 4 14 7 0
....................................................TCAGTTACTTAGTGACTCTCA........................................................................................... 21 1 2 14.00 28 15 11 2 0 0
....................................................TCAGGTACTTAGTGACTC.............................................................................................. 18 0 2 14.00 28 26 0 2 0 0
....................................................TCAGTTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 14.00 28 17 4 5 2 0
....................................................TCAGGCACTTAGTGACTCTCA........................................................................................... 21 1 2 14.00 28 2 4 18 4 0
............................................................................................AGAGACGCTCTGTACCTAGACTGT................................................ 24 0 2 13.50 27 14 1 4 8 0
....................................................TCAGGTACTTAGGGACTCTCA........................................................................................... 21 1 2 13.00 26 13 4 7 2 0
....................................................TAAGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 12.50 25 0 0 22 3 0
....................................................TCAGGTACTTAGGGACTCTCAA.......................................................................................... 22 1 2 12.50 25 13 4 6 2 0
...........................................................................................TAGAGACGCTCTGTACCTAGAC................................................... 22 1 2 12.00 24 21 0 3 0 0
...........................................................................................GAGAGACGCTCTGTACCT....................................................... 18 0 2 12.00 24 19 1 2 2 0
.....................................................CAGGTACTTAGTGACTCTCAAT......................................................................................... 22 1 2 12.00 24 0 24 0 0 0
....................................................TCAGGTACTTAGTGACTCG............................................................................................. 19 1 2 12.00 24 24 0 0 0 0
....................................................TCAGGTACTTAGAGACTCTCAA.......................................................................................... 22 1 2 12.00 24 11 0 9 4 0
..........................................................................................TGAGAGACGCTCTGTACCTGG..................................................... 21 1 2 11.50 23 23 0 0 0 0
....................................................TCAGGTACTTAGTGACCCTCA........................................................................................... 21 1 2 11.50 23 5 9 9 0 0
....................................................TCAGGTACTTAGTGACTCTCAATT........................................................................................ 24 2 2 11.50 23 0 17 6 0 0
..........................................................................................TGAGAGACGCTCTGTACCTAGA.................................................... 22 0 2 11.00 22 15 3 2 1 1
....................................................TCAGGTACTTAGTTACTCTCAA.......................................................................................... 22 1 2 11.00 22 9 2 11 0 0
....................................................TCAGGTACTTAGTGACCCTCAA.......................................................................................... 22 1 2 10.50 21 3 3 14 1 0
....................................................TCAGGTACTTAGTGACTCTCAAAAAA...................................................................................... 26 1 2 10.50 21 1 18 2 0 0
....................................................TCAGGTACTTATTGACTCTCA........................................................................................... 21 1 2 10.50 21 4 11 6 0 0
....................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................... 22 1 2 10.50 21 5 4 9 3 0
....................................................TCAGGTACTTAGTTACTCTC............................................................................................ 20 1 2 10.00 20 15 1 3 1 0
.....................................................CAGGTACTTAGTGACTCTCAAAA........................................................................................ 23 1 2 10.00 20 0 20 0 0 0
....................................................TCAGGTACTTAGTGACTCTAA........................................................................................... 21 1 2 10.00 20 0 1 11 8 0
....................................................TCGGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 9.50 19 3 7 9 0 0
....................................................TCAGGTACTTACTGACTCTCAA.......................................................................................... 22 1 2 9.50 19 5 8 5 1 0
.............................................................................................GAGACGCTCTGTACCTAGACTGT................................................ 23 0 2 9.50 19 10 0 2 7 0
............................................................................................AGAGACGCTCTGTACCTAG..................................................... 19 0 2 9.50 19 15 2 0 2 0
....................................................TCAGGTACTTAGTGACTCTCACT......................................................................................... 23 2 2 9.50 19 7 6 6 0 0
............................................................................................AGAGACGCTCTGTACCTAGACC.................................................. 22 1 2 9.00 18 18 0 0 0 0
....................................................TCAGGTACTTAGTGACTATCAA.......................................................................................... 22 1 2 9.00 18 0 2 12 4 0
....................................................TCAGGTACTTAGTGGCTCTCA........................................................................................... 21 1 2 9.00 18 2 5 8 3 0
.....................................................CAGGTACTTAGTGACTCT............................................................................................. 18 0 2 9.00 18 1 17 0 0 0
....................................................TCAGGTACTTAATGACTCTCA........................................................................................... 21 1 2 9.00 18 1 13 3 1 0
...................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................... 23 0 2 9.00 18 0 2 11 5 0
....................................................TCAGGTACTTAGGGACTCTC............................................................................................ 20 1 2 9.00 18 15 0 2 1 0
....................................................TCAGGTACTTAGTGACTCCCAA.......................................................................................... 22 1 2 9.00 18 2 3 12 1 0
....................................................TCAGGTACTTACTGACTCTCA........................................................................................... 21 1 2 8.50 17 2 7 7 1 0
....................................................CCAGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 8.50 17 1 4 11 1 0
....................................................TCAGGTACTTAGTGACTATCA........................................................................................... 21 1 2 8.50 17 0 1 9 7 0
....................................................TCAGGTACTTAGTGACTCTCAAAT........................................................................................ 24 1 2 8.50 17 0 10 7 0 0
....................................................CCAGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 8.50 17 2 6 4 5 0
...................................................CTCAGGTACTTAGTGACTCTCA........................................................................................... 22 0 2 8.50 17 1 11 5 0 0
....................................................TCAGGTACTTAGTGACTCCCA........................................................................................... 21 1 2 8.50 17 3 5 6 3 0
...........................................................................................GAGAGACGCTCTGTACCTAGACG.................................................. 23 1 2 8.00 16 15 0 1 0 0
....................................................TCAGGTACTTAGTGACTCTCACA......................................................................................... 23 1 2 8.00 16 2 13 1 0 0
...........................................................................................GATAGACGCTCTGTACCTAGAC................................................... 22 1 2 8.00 16 13 0 1 2 0
.............................................................................................GAGACGCTCTGTACCTAGAC................................................... 20 0 2 8.00 16 15 1 0 0 0
....................................................TCAGGTACTTAGTGACTCTCATT......................................................................................... 23 2 2 7.50 15 4 6 3 2 0
....................................................TCAGGTACTTAGTGACTCTCAATAA....................................................................................... 25 2 2 7.50 15 0 12 3 0 0
....................................................TCAGGTACCTAGTGACTCTCAA.......................................................................................... 22 1 2 7.50 15 1 5 9 0 0
.......................................................GGTACTTAGTGACTCTCA........................................................................................... 18 0 2 7.50 15 0 15 0 0 0
...........................................................................................GAGAGACGCTCTGTACCTGGACT.................................................. 23 1 2 7.00 14 11 0 0 2 1
....................................................TCAGGTACTTAGTCACTCTCAA.......................................................................................... 22 1 2 7.00 14 3 1 7 3 0
....................................................TCAGGTACTTAGTGGCTCTCAA.......................................................................................... 22 1 2 7.00 14 1 3 8 2 0
....................................................TCAGGTACTTAGTGATTCTCAA.......................................................................................... 22 1 2 7.00 14 1 1 5 7 0
....................................................TCAGGTACTTAGTGACTCTAAA.......................................................................................... 22 1 2 7.00 14 0 0 10 4 0
.............................................................................................GAGACGCTCTGTACCTAGACT.................................................. 21 0 2 6.50 13 7 2 1 1 2
....................................................TCAGGTACTTAGTGACTCTCAATAAA...................................................................................... 26 2 2 6.50 13 0 11 2 0 0
....................................................TCAGGTACTTAGAGACTCTCA........................................................................................... 21 1 2 6.50 13 4 2 5 2 0
....................................................TCAGGTACTTAGGGACTCT............................................................................................. 19 1 2 6.50 13 13 0 0 0 0
....................................................TCAGGTACTTAGTGAATCTCAA.......................................................................................... 22 1 2 6.50 13 0 1 8 4 0
....................................................TCAGGTACTTATTGACTCTCAA.......................................................................................... 22 1 2 6.50 13 4 5 2 2 0
....................................................TCAGGTACTTAATGACTCTCAA.......................................................................................... 22 1 2 6.50 13 0 10 2 1 0
....................................................TCAGGTACTTAGTGCCTCTCAA.......................................................................................... 22 1 2 6.00 12 1 2 4 5 0
...........................................................................................GAGAGACGCTCTGTACCTAGACTT................................................. 24 1 2 6.00 12 12 0 0 0 0
....................................................TCACGTACTTAGTGACTCTCA........................................................................................... 21 1 2 6.00 12 6 2 4 0 0
...................................................GTCAGGTACTTAGTGACTCTCA........................................................................................... 22 1 2 6.00 12 0 12 0 0 0
....................................................TCAGGTACTTAGTGAATCTCA........................................................................................... 21 1 2 6.00 12 0 0 6 6 0
....................................................TAAGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 6.00 12 0 0 8 4 0
......................................................AGGTACTTAGTGACTCTCAAA......................................................................................... 21 0 2 6.00 12 0 4 8 0 0
....................................................TCAGGAACTTAGTGACTCTCAA.......................................................................................... 22 1 2 6.00 12 0 2 7 3 0
...........................................................................................GAGAGACGCTCTGTACCTAGT.................................................... 21 1 2 5.50 11 9 1 0 0 1
....................................................TCAGTTACTTAGTGACTCTC............................................................................................ 20 1 2 5.50 11 11 0 0 0 0
...........................................................................................GAGAGACGCTCTATACCTAGAC................................................... 22 1 2 5.50 11 10 0 1 0 0
....................................................TCAGGGACTTAGTGACTCTC............................................................................................ 20 1 2 5.50 11 6 0 3 2 0
....................................................TCAGGTACTTATTGACTCTC............................................................................................ 20 1 2 5.50 11 10 0 1 0 0
.......................................................GGTACTTAGTGACTCTCAA.......................................................................................... 19 0 2 5.00 10 0 10 0 0 0
..........................................................................................TGAGAGACGCTCTGTACCTGGA.................................................... 22 1 2 5.00 10 10 0 0 0 0
.............................................................................................GAGACGCTCTGTACCTAGACTG................................................. 22 0 2 5.00 10 10 0 0 0 0
.....................................................CAGGTACTTAGTGACTCTCAC.......................................................................................... 21 1 2 5.00 10 0 10 0 0 0
....................................................TCAGGTACTCAGTGACTCTCAA.......................................................................................... 22 1 2 5.00 10 2 0 6 2 0
..................................................GCTCAGGTACTTAGTGACTCT............................................................................................. 21 0 2 5.00 10 9 0 1 0 0
....................................................TCAGGTACTTAGTGACTCTTAA.......................................................................................... 22 1 2 5.00 10 2 1 4 3 0
...........................................................................................TAGAGACGCTCTGTACCTAGA.................................................... 21 1 2 5.00 10 9 0 1 0 0
....................................................TCAGGCACTTAGTGACTCTC............................................................................................ 20 1 2 5.00 10 2 1 3 4 0
....................................................TCAGGAACTTAGTGACTCTCA........................................................................................... 21 1 2 5.00 10 0 5 5 0 0
...........................................................................................GAGAGACGCTCTGTACCTAGACTG................................................. 24 0 2 5.00 10 10 0 0 0 0
...........................................................................................GAGAGACGCTCTGTACCTATAC................................................... 22 1 2 5.00 10 9 0 1 0 0
................................................CAGCTCAGGTACTTAGTGACT............................................................................................... 21 0 2 5.00 10 8 0 1 1 0
....................................................TCAGGTAATTAGTGACTCTCAA.......................................................................................... 22 1 2 5.00 10 0 0 3 7 0
....................................................TCGGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 5.00 10 2 6 1 1 0
............................................................................................AGAGACGCTCTGTACCTAGACG.................................................. 22 1 2 4.50 9 8 0 0 1 0
...........................................................................................GAGATACGCTCTGTACCTAGAC................................................... 22 1 2 4.50 9 7 0 2 0 0
....................................................TCAGGTATTTAGTGACTCTCAA.......................................................................................... 22 1 2 4.50 9 1 1 5 2 0
....................................................ACAGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 4.50 9 0 0 2 7 0
....................................................TCAGGTACTTAGTGCCTCTCA........................................................................................... 21 1 2 4.50 9 0 0 7 2 0
...........................................................................................GACAGACGCTCTGTACCTAGAC................................................... 22 1 2 4.50 9 9 0 0 0 0
....................................................TCAGGTACTTAGTGATTCTCA........................................................................................... 21 1 2 4.50 9 1 2 4 2 0
....................................................TCAGGTATTTAGTGACTCTCA........................................................................................... 21 1 2 4.50 9 0 4 4 1 0
....................................................TCAGGTACTTAGTCACTCTCA........................................................................................... 21 1 2 4.50 9 6 0 2 1 0
....................................................TCAAGTACTTAGTGACTCTCA........................................................................................... 21 1 2 4.50 9 1 1 4 3 0
....................................................GCAGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 4.00 8 0 0 3 5 0
...........................................................................................GAGAGACGCCCTGTACCTAGAC................................................... 22 1 2 4.00 8 8 0 0 0 0
....................................................TCAGGTACTTACTGACTCTC............................................................................................ 20 1 2 4.00 8 8 0 0 0 0
....................................................TCAGGTACTTAGTGACTCTCATA......................................................................................... 23 1 2 4.00 8 0 6 2 0 0
....................................................TCAGGTGCTTAGTGACTCTCAA.......................................................................................... 22 1 2 4.00 8 3 0 5 0 0
...................................................ATCAGGTACTTAGTGACTCTCA........................................................................................... 22 1 2 4.00 8 0 7 1 0 0
....................................................TCATGTACTTAGTGACTCT............................................................................................. 19 1 2 4.00 8 7 0 1 0 0
....................................................TCAGGTACTTAGCGACTCT............................................................................................. 19 1 2 4.00 8 8 0 0 0 0
....................................................TCAGGTACTTAGTGACTCTCGA.......................................................................................... 22 1 2 4.00 8 0 2 6 0 0
....................................................TCAGGTACTTAGTGACTCTCCA.......................................................................................... 22 1 2 4.00 8 4 0 3 1 0
....................................................TCAGGTGCTTAGTGACTCTCA........................................................................................... 21 1 2 4.00 8 2 4 1 1 0
....................................................TCAGGTACTTAGTAACTCTCAA.......................................................................................... 22 1 2 3.50 7 0 1 5 1 0
....................................................TCAGGTACTTAGTGACTCTCAATG........................................................................................ 24 1 2 3.50 7 0 6 1 0 0
....................................................TCAGGTACTTCGTGACTCTCAA.......................................................................................... 22 1 2 3.50 7 0 0 5 2 0
.....................................................CAGGTACTTAGTGACTCTCAT.......................................................................................... 21 1 2 3.50 7 0 6 1 0 0
....................................................TCAGGTAATTAGTGACTCTCA........................................................................................... 21 1 2 3.50 7 0 0 4 3 0
....................................................TCAGGTACTTAGTGACTCTTA........................................................................................... 21 1 2 3.50 7 0 0 6 1 0
....................................................TCAGGTACTCAGTGACTCTCA........................................................................................... 21 1 2 3.50 7 0 1 5 1 0
..........................................................................................TGAGAGACGCTCTGTACCT....................................................... 19 0 2 3.50 7 7 0 0 0 0
....................................................TTAGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 3.50 7 2 4 1 0 0
.....................................................CAGGTACTTAGTGACTCTCAAAAA....................................................................................... 24 1 2 3.50 7 0 7 0 0 0
....................................................TCAGGTACTTAGTGACTCTCAAAAAAA..................................................................................... 27 2 2 3.50 7 0 7 0 0 0
....................................................TCAGGTACTTAGTAACTCTCA........................................................................................... 21 1 2 3.50 7 1 2 3 1 0
....................................................TTAGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 3.50 7 0 0 6 1 0
......................................................AGGTACTTAGTGACTCTC............................................................................................ 18 0 2 3.50 7 0 4 3 0 0
....................................................TCAGGTACTTAGTTACTCT............................................................................................. 19 1 3 3.33 10 8 1 1 0 0
....................................................TCATGTACTTAGTGACTCTC............................................................................................ 20 1 2 3.00 6 4 1 1 0 0
....................................................TCAGGTACTTAGTGACTCTCAAGA........................................................................................ 24 2 2 3.00 6 0 2 4 0 0
.....................................................CAGGTACTTAGGGACTCTCA........................................................................................... 20 1 2 3.00 6 0 6 0 0 0
....................................................TCAGGTACTTAGTGACTCTCACAA........................................................................................ 24 2 2 3.00 6 0 4 2 0 0
....................................................TCAGGTACTTGGTGACTCTCAA.......................................................................................... 22 1 2 3.00 6 1 1 2 2 0
...........................................................................................GAGAGACGCTCTGTACCTAGAAC.................................................. 23 2 2 3.00 6 6 0 0 0 0
....................................................TCAGGTACTTAGTGTCTCTCA........................................................................................... 21 1 2 3.00 6 1 1 2 2 0
....................................................TCAGGTACTTAGTGACTCTA............................................................................................ 20 1 2 3.00 6 0 1 3 2 0
....................................................TCAGCTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 3.00 6 2 1 2 1 0
....................................................TCACGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 3.00 6 1 2 3 0 0
.....................................................CAGGTACTTAGTGACTCTCAAC......................................................................................... 22 1 2 3.00 6 0 6 0 0 0
...........................................................................................GAGAGACTCTCTGTACCTAGAC................................................... 22 1 2 3.00 6 4 0 1 1 0
....................................................TCAGGTGCTTAGTGACTCTC............................................................................................ 20 1 2 3.00 6 5 0 0 1 0
....................................................TCAGGTACTTAGTGAGTCTCAA.......................................................................................... 22 1 2 3.00 6 0 3 0 3 0
....................................................ACAGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 3.00 6 2 0 2 2 0
....................................................TCAGGTACTTCGTGACTCTCA........................................................................................... 21 1 2 2.50 5 0 0 4 1 0
....................................................TCAGGTACTTAGTGACTCTCAAAC........................................................................................ 24 1 2 2.50 5 1 2 2 0 0
...........................................................................................GAGGGACGCTCTGTACCTAGAC................................................... 22 1 2 2.50 5 4 0 0 1 0
....................................................TCAGGTACTTAGTCACTCTC............................................................................................ 20 1 2 2.50 5 5 0 0 0 0
........................................................GTACTTAGTGACTCTCAA.......................................................................................... 18 0 2 2.50 5 0 4 0 1 0
............................................................................................AGAGACGCTCTGTACCTAGACTT................................................. 23 1 2 2.50 5 2 0 2 1 0
....................................................TCAGGCACTTAGTGACTCT............................................................................................. 19 1 2 2.50 5 4 1 0 0 0
....................................................TCAGGTACCTAGTGACTCTCA........................................................................................... 21 1 2 2.50 5 0 0 5 0 0
....................................................TCAGCTACTTAGTGACTCTCA........................................................................................... 21 1 2 2.50 5 1 1 2 1 0
...........................................................................................GAGAGACGCTCTGTACCCAGAC................................................... 22 1 2 2.50 5 3 0 1 1 0
....................................................TCAGGTACTTAGTGACACTCA........................................................................................... 21 1 2 2.50 5 0 0 4 1 0
....................................................TCAGGTACTTAGTGACTCTCAACA........................................................................................ 24 2 2 2.50 5 0 4 1 0 0
....................................................TCAGGTACTTAGCGACTCTCAAA......................................................................................... 23 1 2 2.50 5 0 0 4 1 0
....................................................TCAGGTACTTAGTCACTCT............................................................................................. 19 1 2 2.50 5 5 0 0 0 0
..............................................................................................AGACGCTCTGTACCTAGACTGT................................................ 22 0 2 2.50 5 4 0 0 1 0
............................................................................................AGAGACGCTCTGTACCTAGAAA.................................................. 22 2 2 2.50 5 4 0 0 0 1
............................................................................................AGAGACGCTCTGTACCTAGG.................................................... 20 1 2 2.50 5 5 0 0 0 0
...........................................................................................GGGAGACGCTCTGTACCTAGAC................................................... 22 1 2 2.50 5 4 0 1 0 0
................................................CAGCTCAGGTACTTAGTGACTC.............................................................................................. 22 0 2 2.50 5 1 1 2 1 0
....................................................TCAGGTACTTAGTGACTTTCA........................................................................................... 21 1 2 2.00 4 0 0 3 1 0
....................................................TCAGGTACTTAGAGACTCT............................................................................................. 19 1 2 2.00 4 4 0 0 0 0
....................................................TCAGGTACTTAGTGACCCT............................................................................................. 19 1 2 2.00 4 3 0 0 1 0
....................................................TCAGGTACTTAGTGACGCTCAA.......................................................................................... 22 1 2 2.00 4 0 3 1 0 0
....................................................TCAGGTACTTAGTGACTCACA........................................................................................... 21 1 2 2.00 4 0 1 1 2 0
....................................................TCAGTTACTTAGTGACTCT............................................................................................. 19 1 2 2.00 4 4 0 0 0 0
....................................................TCAGGTACTTAGCGACTCTC............................................................................................ 20 1 2 2.00 4 2 0 1 1 0
...........................................................................................GAGAGACGCTCTGTACCTAGAAT.................................................. 23 1 2 2.00 4 2 0 0 2 0
....................................................TCAGGTACTTAATGACTCTCAAA......................................................................................... 23 1 2 2.00 4 0 4 0 0 0
....................................................TCCGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 2.00 4 0 0 2 2 0
...........................................................................................GAGGGACGCTCTGTACCTAGACT.................................................. 23 1 2 2.00 4 4 0 0 0 0
....................................................TCAGGTACATAGTGACTCTCAA.......................................................................................... 22 1 2 2.00 4 0 1 2 1 0
...........................................................................................GAGAGACGCTCTGTGCCTAGAC................................................... 22 1 2 2.00 4 4 0 0 0 0
....................................................TCAGGTACTTAGTGACCCTC............................................................................................ 20 1 2 2.00 4 2 0 2 0 0
....................................................TCAGGTACTTAGTGACACTCAA.......................................................................................... 22 1 2 2.00 4 0 1 3 0 0
...........................................................................................GAGAGACGCTCTGCACCTAGACT.................................................. 23 1 2 2.00 4 2 0 1 1 0
...........................................................................................GAGAGACGCTCTATACCTAGACT.................................................. 23 1 2 2.00 4 4 0 0 0 0
...........................................................................................GAGAGACGCTCCGTACCTAGAC................................................... 22 1 2 2.00 4 2 0 2 0 0
...................................................TTCAGGTACTTAGTGACTCTCAA.......................................................................................... 23 1 2 2.00 4 0 4 0 0 0
....................................................GCAGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 2.00 4 0 1 0 3 0
....................................................TCAGGTACTTAGAGACTCTC............................................................................................ 20 1 2 2.00 4 4 0 0 0 0
....................................................TCAGGTACTTAGTGATTCTC............................................................................................ 20 1 2 2.00 4 2 0 1 1 0
....................................................TCAGGTACTTAGTGACTTTCAA.......................................................................................... 22 1 2 2.00 4 0 0 2 2 0
...........................................................................................GAGAGACGCTCTGCACCTAGAC................................................... 22 1 2 2.00 4 4 0 0 0 0
....................................................TCAGGTACTTGGTGACTCTC............................................................................................ 20 1 2 2.00 4 1 0 3 0 0
....................................................TCATGTACTTAGTGACTCTCAAA......................................................................................... 23 1 2 2.00 4 0 2 2 0 0
....................................................TCGGGTACTTAGTGACTCTC............................................................................................ 20 1 2 2.00 4 2 1 1 0 0
....................................................TCAGGTACTTAGTGGCTCT............................................................................................. 19 1 2 2.00 4 3 0 0 1 0
...................................................CTCAGGTACTTAGTGACTCTC............................................................................................ 21 0 2 2.00 4 3 0 1 0 0
.....................................................CAGGTACTTAGTGACTCTCACC......................................................................................... 22 2 2 2.00 4 2 2 0 0 0
....................................................TCAGGTACTTAGCGACTCTCAAAA........................................................................................ 24 2 2 2.00 4 0 0 4 0 0
....................................................TCAGGTACTTAGTGACTCTCAAACA....................................................................................... 25 1 2 2.00 4 1 3 0 0 0
....................................................TCAGGTACTTAGTGAGTCTCA........................................................................................... 21 1 2 2.00 4 0 3 1 0 0
...................................................GTCAGGTACTTAGTGACTCTCAA.......................................................................................... 23 1 2 2.00 4 0 4 0 0 0
....................................................TCAGGTACTTAGTGACTCTCACCA........................................................................................ 24 3 2 2.00 4 0 4 0 0 0
...........................................................................................GACAGACGCTCTGTACCTAGAA................................................... 22 2 2 2.00 4 4 0 0 0 0
...........................................................................................GAGAGGCGCTCTGTACCTGGAC................................................... 22 2 2 1.50 3 3 0 0 0 0
....................................................TCAGGTACTTAGTGACTGTCAA.......................................................................................... 22 1 2 1.50 3 0 0 3 0 0
....................................................TGAGGTACTTAGTGACTCTCA........................................................................................... 21 1 2 1.50 3 1 0 2 0 0
...........................................................................................GAGAGACGCTCTTTACCTAGAC................................................... 22 1 2 1.50 3 2 0 1 0 0
...........................................................................................GAGAGACGCTCTGTATCTAGAC................................................... 22 1 2 1.50 3 2 0 1 0 0
....................................................TCAGCTACTTAGTGACTCTC............................................................................................ 20 1 2 1.50 3 2 0 1 0 0
....................................................TCAGGTACTTATTGACTCT............................................................................................. 19 1 2 1.50 3 3 0 0 0 0
...........................................................................................TAGAGACGCTCTGTACCTAGACT.................................................. 23 1 2 1.50 3 2 0 0 1 0
...........................................................................................GATAGACGCTCTGTACCTAGACT.................................................. 23 1 2 1.50 3 2 0 1 0 0
......................................................AGGTACTTAGTGACTCTCAAT......................................................................................... 21 1 2 1.50 3 0 1 2 0 0
...........................................................................................GAGAGGCGCTCTGTACCTAGAC................................................... 22 1 2 1.50 3 3 0 0 0 0
...........................................................................................GAGAGACGCTCTCTACCTAGAC................................................... 22 1 2 1.50 3 3 0 0 0 0
....................................................TCAGGTACTTAGTGACTCTCAATAAAA..................................................................................... 27 3 2 1.50 3 0 3 0 0 0
....................................................TCAGGTACATAGTGACTCTCA........................................................................................... 21 1 2 1.50 3 1 0 0 2 0
....................................................TCAGGTACTTAGTGACTCTGA........................................................................................... 21 1 2 1.50 3 1 0 2 0 0
....................................................TCAGGCACTTAGTGACTCTCAAAA........................................................................................ 24 2 2 1.50 3 0 0 3 0 0
...........................................................................................GAGAGACGCTCTGGACCTAGA.................................................... 21 1 2 1.50 3 3 0 0 0 0
....................................................TCAGGTACTTTGTGACTCTCA........................................................................................... 21 1 2 1.50 3 0 1 1 1 0
....................................................TCTGGTACTTAGTGACTCTCAA.......................................................................................... 22 1 2 1.50 3 1 0 1 1 0
....................................................TCAGGTACTTAGTGACTCTCAAAG........................................................................................ 24 0 2 1.50 3 0 3 0 0 0
....................................................TCAGGTACTTAGTGGCTCTCAAA......................................................................................... 23 1 2 1.50 3 0 1 2 0 0
....................................................TCAGGTACTTAGTGACTCTCATAT........................................................................................ 24 2 2 1.50 3 0 3 0 0 0
..........................................................................................CGAGAGACGCTCTGTACCTAGA.................................................... 22 1 2 1.50 3 3 0 0 0 0
....................................................TCAGGTACTTAGTGACTCTCATAAA....................................................................................... 25 2 2 1.50 3 0 2 1 0 0
....................................................TCAGGTACTTAGTGACTATCAAA......................................................................................... 23 1 2 1.50 3 0 0 3 0 0
....................................................TCAGGTACTTAGTGACTCTCTA.......................................................................................... 22 1 2 1.50 3 1 0 0 2 0
..................................................GCTCAGGTACTTAGTGACTCTC............................................................................................ 22 0 2 1.50 3 1 0 1 1 0
...........................................................................................GAGAGACGCTCTGTAACTAGACT.................................................. 23 1 2 1.50 3 1 0 0 2 0
...........................................................................................GAGAGACGCTCTGTACCTATACT.................................................. 23 1 2 1.50 3 1 0 1 1 0
....................................................TCAGGGACTTAGTGACTCT............................................................................................. 19 1 2 1.50 3 2 0 1 0 0
....................................................TCAGGTACTTAGTTACTCTCAAT......................................................................................... 23 2 2 1.50 3 0 1 2 0 0
...........................................................................................GAGAGATGCTCTGTACCTAGA.................................................... 21 1 2 1.50 3 2 0 1 0 0
....................................................CCAGGTACTTAGTGACTCTC............................................................................................ 20 1 2 1.50 3 0 2 0 1 0
...........................................................................................GAGAGACGCTCTGTACCTAGACTA................................................. 24 1 2 1.50 3 1 1 0 0 1
...........................................................................................GAGAGACGCTCTGTACCTGGACC.................................................. 23 2 2 1.50 3 3 0 0 0 0
.........................................................................................TTGAGAGACGCTCTGTACCC....................................................... 20 1 2 1.50 3 3 0 0 0 0
...........................................................................................CAGAGACGCTCTGTACCTAGAC................................................... 22 1 2 1.50 3 2 0 0 1 0
....................................................TCAGGTATTTAGTGACTCTC............................................................................................ 20 1 2 1.50 3 0 0 1 2 0
.................................................AGCTCAGGTACTTAGTGACTCT............................................................................................. 22 0 2 1.50 3 2 0 0 1 0
...........................................................................................GAGAGACTCTCTGTACCTGGAC................................................... 22 2 2 1.50 3 3 0 0 0 0
...........................................................................................GACAGACGCTCTGTACCTAG..................................................... 20 1 2 1.50 3 3 0 0 0 0
....................................................CCAGGTACTTAGTGACTCTCAAA......................................................................................... 23 1 2 1.50 3 0 0 3 0 0
....................................................TCAGGTACTTACTGACTCT............................................................................................. 19 1 2 1.50 3 2 1 0 0 0
....................................................TCAGGTACTTAGTGTCTCTCAA.......................................................................................... 22 1 2 1.50 3 0 0 0 3 0
....................................................TCAGGTACTTAGTGACTCTCATC......................................................................................... 23 2 2 1.50 3 1 2 0 0 0
....................................................TCAGGTACTTAGTGACTCTCAACT........................................................................................ 24 2 2 1.50 3 1 0 2 0 0
....................................................TCAGGGACTTAGTGACTCTCAAT......................................................................................... 23 2 2 1.50 3 2 0 1 0 0
....................................................TCCGGTACTTAGTGACTCTCAAA......................................................................................... 23 1 2 1.50 3 0 1 2 0 0
....................................................TCAGATACTTAGTGACTCTC............................................................................................ 20 1 2 1.50 3 2 1 0 0 0
....................................................TCAGGTACTTAGTGGCTCTC............................................................................................ 20 1 2 1.50 3 2 0 1 0 0
...........................................................................................GAGAGACGCTCTGTACCTGGAA................................................... 22 2 2 1.50 3 3 0 0 0 0

Anti-sense strand reads

ACTGTTTTTTCACTGATATGTTTCACTATGCTCAATAGAGACGGATTTGTCGAGTCCATGAATCACTGAGAGTTTCTTATATATATCTGAACTCTCTGCGAGACATGGATCTGACAACACAGACGCCTTACAGTTGTAGTACACACACACACACACACTATATA

************************************.(((((....(((((((((((((..((((.(((((((...............))))))).))))..)))))).))..)))))....)))))************************************* 		Read size # Mismatch Hit Count Total Norm Total V117

male body
..........................................AGATTTGTCGAGTGCATG........................................................................................................ 18 2 6 0.17 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004945:873686-873849 - dwi-mir-306-2 Known_mirbase T-GACAA----A-----------------------------------AA-------------------------------------------------A----------------GTGACTA-TACAAAGTGATAC----GA--GTTATCTCTGCCT-------------AAA-CAGCTCAGGTACTTAGTGACTCTCAAA--------GAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTGTGTCTGCGGAATGTCA-ACATCA-T-GT-----GTGT--------------------------------G-TG--TGTGTGTG-------AT-----------ATAT
droVir3 scaffold_12963:12863163-12863338 - dvi-mir-306 Known_mirbase T-GTCAG----T-----------------------------------TGT-------------------------------------------------------------------GCTT--TTCCGTG---------------CTGAACTCCTCCCGCCCTGCACACCCCG-CTGCTCAGGTACTTAGTGACTCTCAATCATCTATTGCTT-TGCAT-ACCTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CTGTGCTGCACAA-CCAACG-A-CG-AG-ATGCA-TACGTGA------------------------CC-----CTGACCG-------T---------GACCGGG
droMoj3 scaffold_6500:7201914-7202113 + dmo-mir-306 Known_mirbase T-AGCTA----G-----------------------------------AG-------------------------------------------------A----------------GTGCCCG-A-----------------T--TCATG-------ATGTCCAGCACACGCTG-CAGCTCAGGTACTTAGTGACTCTCAATCACATATTGCTT-TGCAT-ACTTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CCGTGTTGCACACAGCCACA-C-AA--T-TGTGAATTCGAGTTCGAACTCCCCGGACTAGAGAATACAAG--TGCAAGTGTCTTGTAAT------------GTA
droGri2 scaffold_14978:830822-831051 + dgr-mir-306 Known_mirbase A-GATAA----A---------------AAAGCGAAAGATTCGTTCGTCGATTGGTTCTTATTCTTGTGTTAATCATTATCAGTGTT--AAA-TGTGGAA----------------AA---------------ACCAATCCAA--TCCGCTGCACACG-------------TTG-CTGCTCAGGTACTTAGTGACTCTCAATTCAACATTGTAT-TGCACGCCTTTGAGGGTCGCTCTGTGCCTGTGTTGC-----ACGTGTTGCATTC-ACACCA-T-C--CG-AGTGA-TTTGTGT------------------------CC----TTTGAGTG-------TC-----------GATT
dp5 4_group3:8443792-8443942 + dps-mir-306 Known_mirbase T-GTTTA----T-----------------------------------CG-------------------------------------------------A----------------GTGATTT-A-----------------T--CTACAAGCACACT-------------TTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACT-GCAACG-A-TT-AAGGGTGT--------------------------------TCCT--AATAAGTG-------TT---AT-------AAT
droPer2 scaffold_1:9894911-9895064 + dpe-mir-306 Known_mirbase T-GTTTA----T-----------------------------------CG-------------------------------------------------A----------------GTGATTT-A-----------------T--CTACAAGCACACT-------------TTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACT-GCAACG-A-TT-AAGGGTGT--------------------------------TCCT--AATAAGTG-------TTATAT-------TTAG
droAna3 scaffold_12916:15864828-15864969 - dan-mir-306 Known_mirbase A-TTGGA-------------------------------------------------------------------------------------TGTGAAA----------------GT------------------------G--CCAGAAGTCCACT-------------TGG-TAGCTCAGGTACTTAGTGACTCTCAAT--------GCAT-TTGAC-ATTTTGGGAGCCACTTTGTGCCTGGGCCAT-----CAGTGCGACTATA-TCTTCT-A-TT-AA-AAAAA--------------------------------TT-----GTTTAAA-------AT-----------ATAT
droBip1 scf7180000396717:103576-103703 - G-AAAAA----T-----------------------------------AT-------------------------------------------TGTGAAA----------------GT--TGA-C-----------------C--CGAAAAGTCCACT-------------TAA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GTAT-TTGAC-ATTTTGAGAGCCACTTTGTGCCTGGGCCAT-----CAGTGTGGCTATA-TCTTCT-A-------------------------------------------------------------------------------TAT
droKik1 scf7180000302382:529232-529470 + T-AAGTA----TATTATATCAGTGTAAAAAGTGCAAGATATTTTCAAAATTTAGTAATTAATTAAGTGT--ATTTTTATCAGTGTA--AAAAAGTGCAAGTGTTTTGTGTTTCAAGTGCTGT-A--------A--------T--ACCAGTGCCCACT--------TG--ATGA-TGGCTCAGGTACTTAGTGACTCTCAAA--------TGCCTTGAAAAGTTTTGAGAGTCTCTCTGTGCCTAGGCTGT-----AGGTGAGGCAAAC-TCAACT-A-CA-TA-CATCA--------------------------------A--------------------TT-----------AAAT
droFic1 scf7180000454078:624031-624193 + A-T-CAG----T-----------------------------------GG------------------------------------------CTATAGCA----------------GTGCATA-T-----------------T--TTCTGTGCTTGCT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GGAT-TTCAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----AAGTAAGACATTCTCCTACA-A-AAAAA-AGTGT--------------------------------TAAA--AATAAGTT-------G----ATTACAACAGGT
droEle1 scf7180000490579:645541-645688 - ATATCAG-------------------------------------------------------------------------------------------------------------TATATTTATAAGC---GTGCATTTGA--TTTTAAGCCCACT-------------TGA-TTGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCAATG-TCTACA-G-GT-AA-AGTGA--------------------------------TAAA-------------------------------TAT
droRho1 scf7180000768553:9361-9521 + T-GTCAG-------------------------------------------------------------------------------------------------------------TGTATATCTCAGTA--GTGCATATAT--TTTTGAGCCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCATTC-TCCCCA-T-TA-AA-AGTGT--------------------------------TAAC--TATAATTG-------C---------AATAAAA
droBia1 scf7180000301468:857974-858141 + T-GCTTG----T-----------------------------------GGA--------------------------------------T--------AA----------------GTGTTTT-ATCAGTGGAAAAT----GA--ATTCAAGCTTACT-------------AGG-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ACTTTGGGACTCGCTCTGTACCTGCGCTGC-----CGGTGAGGCCCTC-TCTACA-A-AG-AA-ATA----------------------------------CAAAATAGTATATA-------TA-------ATATAAGA
droTak1 scf7180000415914:422623-422774 + ATG--AGTGTAT-----------------------------------ATT-----------------------------------------ATATATCA----------------GTGCATA-T-----------------CTCTTTTAAGCCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGCGCCGC-----CAGTAAGGCATTC-TCCACAGAAAT-AA-AGTGT--------------------------------TAAA-------------------------------TAA
droEug1 scf7180000408961:272321-272470 + T-ACAAA----T-----------------------------------GGA--------------------------------------TCAATGTGCAA----------------GTGACTA-T-----------------T--TTTCAAGTCCACT-------------TAA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GATT-TTGAC-AATTTGGGAGTCGCTCTGTGCCTGTGCTGC-----TAGTGAGGCAATCTTCTACA-A-AT-AA-AGTGAA-------------------------------T--------------------------TT-----ACAT
dm3 chr2L:16698379-16698522 + dme-mir-306 Known_mirbase G-TTTAA----A------------------------------------------------------------------------------------TCA----------------GTGAATA-G-----------------T--TTAAAAGTCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAA-TCTACA-A-AT-AA-AGTGA--------------------------------TA-----ATCAGTG-------AT------------ATC
droSim2 2l:16265194-16265353 + dsi_274 confident T-GACTT----T-----------------------------------AGT-----------------GT-----------------GT---TTAAATCA----------------GTGAATA-G-----------------T--TTAAAAGTCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAA-TCTACA-A-AT-AA-AGTGA--------------------------------TAAG--TACCAGTG-------A----AT-------TAC
droSec2 scaffold_7:345384-345543 + dse-mir-306 Known_mirbase T-GACTT----T-----------------------------------AGT-----------------GT-----------------GT---TTAAATCA----------------GTGAACA-G-----------------T--TTAAAATTCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAA-TCTACA-A-AT-AA-AGGGA--------------------------------TAAG--TACCAGTG-------A----AT-------AAC
droYak3 2R:4404538-4404670 - dya-mir-306 Known_mirbase A-T------------------------------------------------------------------------------------------AAATCA----------------GTGAAAA-G-----------------T--TTTAAAGTCCACT-------------CGG-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTAGGACATAA-TCCACA-A-AT-AA-AGTGA--------------------------------T--------------------------T-------TAC
droEre2 scaffold_4845:19768027-19768178 + der-mir-306 Known_mirbase T-GTGTA-------------------------------------------------------------------------------------CAAGTCA----------------GTGAATA-G-----------------T--TTAAGTGTCCACT-------------CGG-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACGCAA-TCAACA-AAAT-AA-AGTGA--------------------------------TAAG--TACAAGTG-------A----AT-------TGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
T-GACAA----A-----------------------------------AA-------------------------------------------------A----------------GTGACTA-TACAAAGTGATAC----GA--GTTATCTCTGCCT-------------AAA-CAGCTCAGGTACTTAGTGACTCTCAAA--------GAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTGTGTCTGCGGAATGTCA-ACATCA-T-GT-----GTGT--------------------------------G-TG--TGTGTGTG-------AT-----------ATATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................2128714.5017429239575571662171244
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2228614.0017228244056741473491751
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAC................................................................................................................2222118.504237353511252358180
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2021732.00346419085414825186
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................1921032.502065177317217643
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................232864.00172891737086535
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACT...............................................................................................................232850.0017001364345475173
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGA.................................................................................................................212554.50110999726184325
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................202384.507692760070
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................212259.505191515021
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................232242.004841426322032
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAG..................................................................................................................202234.00468430141248
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................242218.004361122102040
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACT...............................................................................................................222190.503812679212460
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................222101.00202559413814
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21278.501571299289
...............................................................................................................................................................................................................................TTGAGAGACGCTCTGTACCTAG..................................................................................................................22259.001181151020
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGA.................................................................................................................20258.501171042056
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACC...............................................................................................................23255.501111032006
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................19255.001101091000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................22249.509922310433
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................20246.00921460387
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................19245.509135002810
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAA................................................................................................................22244.5089782333
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGG.................................................................................................................21242.5085850000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................22241.5083082010
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGAC................................................................................................................21236.00725714010
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAAA...............................................................................................................23235.5071660113
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACA...............................................................................................................22235.0070524356
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................23226.5053473111
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................19226.0052250000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21226.0052435031
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACA...............................................................................................................23222.50451515618
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................23222.504513210110
................................................................................................................................................................................................................................TGAGAGACGCTCTGTACCTAG..................................................................................................................21220.0040390001
...............................................................................................................................................................................................................................TTGAGAGACGCTCTGTACCT....................................................................................................................20219.5039380001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................24219.00380240140
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23218.0036031041
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21217.0034243043
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18214.0028260020
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACTGT.............................................................................................................24213.5027141048
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCT....................................................................................................................18212.0024191022
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................22212.0024024000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCG..................................................................................................................................................................19212.0024240000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................24211.5023017060
................................................................................................................................................................................................................................TGAGAGACGCTCTGTACCTAGA.................................................................................................................22211.0022153121
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22210.502154093
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................23210.0020020000
...................................................................................................................................................................................................................................GAGACGCTCTGTACCTAGACTGT.............................................................................................................2329.5019100027
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAG..................................................................................................................1929.5019152002
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACT--------......................................................................................................................................................2329.501976060
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACC...............................................................................................................2229.0018180000
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................1829.0018117000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2329.0018020115
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................2428.5017010070
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................2228.5017111050
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACG...............................................................................................................2328.0016150010
...................................................................................................................................................................................................................................GAGACGCTCTGTACCTAGAC................................................................................................................2028.0016151000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATT--------......................................................................................................................................................2327.501546032
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................1827.5015015000
...................................................................................................................................................................................................................................GAGACGCTCTGTACCTAGACT...............................................................................................................2126.501372211
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTT..............................................................................................................2426.0012120000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2126.001204080
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGT.................................................................................................................2125.501191100
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................1925.0010010000
...................................................................................................................................................................................................................................GAGACGCTCTGTACCTAGACTG..............................................................................................................2225.0010100000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................2125.0010010000
................................................................................................................................................................................GCTCAGGTACTTAGTGACTCT..................................................................................................................................................................2125.001090010
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTG..............................................................................................................2425.0010100000
..............................................................................................................................................................................CAGCTCAGGTACTTAGTGACT....................................................................................................................................................................2125.001080011
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACG...............................................................................................................2224.50980001
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................2123.50706010
................................................................................................................................................................................................................................TGAGAGACGCTCTGTACCT....................................................................................................................1923.50770000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................1823.50704030
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.....................................................................................................................................................2423.00602040
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAAC...............................................................................................................2323.00660000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................2023.00601032
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2223.00606000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................2422.50512020
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................1822.50504001
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACTT..............................................................................................................2322.50520021
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................2422.50504010
....................................................................................................................................................................................................................................AGACGCTCTGTACCTAGACTGT.............................................................................................................2222.50540001
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGAAA...............................................................................................................2222.50540100
..................................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGG.................................................................................................................2022.50550000
..............................................................................................................................................................................CAGCTCAGGTACTTAGTGACTC...................................................................................................................................................................2222.50511021
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2122.00430010
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................2222.00422000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................2422.00404000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................2121.50301020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------G.....................................................................................................................................................2421.50303000
................................................................................................................................................................................GCTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2221.50310011
.................................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTA..............................................................................................................2421.50311100
...............................................................................................................................................................................................................................TTGAGAGACGCTCTGTACCC....................................................................................................................2021.50330000
...............................................................................................................................................................................AGCTCAGGTACTTAGTGACTCT..................................................................................................................................................................2221.50320001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------......................................................................................................................................................2321.50312000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.....................................................................................................................................................2421.50310020
droVir3
T-GTCAG----T-----------------------------------TGT-------------------------------------------------------------------GCTT--TTCCGTG---------------CTGAACTCCTCCCGCCCTGCACACCCCG-CTGCTCAGGTACTTAGTGACTCTCAATCATCTATTGCTT-TGCAT-ACCTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CTGTGCTGCACAA-CCAACG-A-CG-AG-ATGCA-TACGTGA------------------------CC-----CTGACCG-------T---------GACCGGGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................221272895.002728952454118717295917123331229819712351817415258514218469394587761106145335921199510884168051752977124320252372236880520813010578806263162659849141315161031127311431191881115713381403307235628883452410324730998542884197276928073994393977392540282557746778
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................211189946.001899464336651623720644381887648014681992770452041105452212309265674241507138010595827508872725974459527141613439541992914623710542033253999399101291489171025163631151914201016901594946134102895061906919693768624202453207015952622225061532497283660346308
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA..............................................................................................................................................................23139380.0039380374390226810516451111538183520820161650102920211318691499135759240619564513863112411361164910942794814220110501110100261215101263824477048991745898895571622722824141358958713881644
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................20131429.00314293057201293324207114197951411215945725210926421713720340833152996573310337399687624721116760183994123015596087653680143326242757221129181741720194342324234810243693682981913103679503493849861029
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................22120137.00201379012066924777965231515158201233331549393213723422431631414610662138120321041461216910640133213013444232202231250173415222922252122672660622476637624158640152612911415
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGC................................................................................................................22116013.001601323131339315813148181583694631425621101169056120525599161632175412310203710127210112327372625471081096588617377898238899172427222623571363157419252146293141415
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA.............................................................................................................................................................24113822.001382213424565175112100094311213505304442635103448577461434614361632540324919030000100000000000131005702352274227370218216592142106141536213289554578
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA..............................................................................................................................................................2318584.0085841535923302110013011000210015131316165422252205370509001000020001000200024000302614741540975200184174144142197743278301835898
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC..............................................................................................................................................................2316758.006758557186303212200000001301241187335465230156621200021160664254176125843411624100010423408221493507426398515705160203244414457
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT..............................................................................................................................................................2314949.00494988906019316010013112427951010850759914615854462053818628310666391101010231101010200142100811095455334201551621027714511732660111276275
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................1914333.004333177654269915141200110415327124142362254404474648464142127651834626625711729622702131100221110111311233206122292181031251309764137115859228966
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG.................................................................................................................2111776.001776101015658836516408350001056171563315176649437256503174311222428312711200011200111110000001228130145015171369778533716111251012
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2011667.001667001481200000000012214220130129201113521311071810901000000000000000000001000322004022000135
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC..............................................................................................................................................................2311649.00164913118314230000000011000431357128191041842362482110002010010100000401001362272371874346262351441004963157166
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................2111442.0014421751760915172012100005142198268433714253444465140511011210010203600000010100002100234100033231141317202330271035811
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2111261.001261027923001000000024212202504137585525123212303452193210000000000000000000000000212137303210311
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................2211215.001215333276470100021137399026773835685853652672251326337302190000000000010000000150024347076576131361284310152336
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................2011154.0011541159114470000012165667510131044767772116611217465866788684334900000000000000000001500223235202427030112
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACAA.............................................................................................................................................................2411020.0010200014310000000000000002004151322161111280202743231000000000000000000000000023111611608445287106732338682
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATA.............................................................................................................................................................241979.009790081000000000002000000035101071313111413674010120011100000000010000722272261413220237112306776
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................191758.0075810940738010413015927396111520313130372615113636443834139840000000000000001000250022814303222412011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACA.............................................................................................................................................................241731.00731101000000000100000000001010000022031086200022101110000000000000010131164762922205035348592
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCT...............................................................................................................231716.007161281030100010000002001001101000100000011000053252201002031160011120321251141017610511311011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCA.............................................................................................................................................................241599.0059911210000000000010000000010001200010223000000000000000000010000001111139532100153531439068
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................211584.0058430523001441010000784554282322561020102126755168000001000010100000009000257553987911145165101433
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCC...............................................................................................................231553.005536374043000010000010004110000002030300000000094410423110100122860000000395267466412000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT.............................................................................................................................................................241494.0049402740000001000110002020213657324401311310200102011112211103000161273947429914147842340
..................................................................................................................................................................................TCAGGTACTTAGTGACT....................................................................................................................................................................171439.00439000000000000000000000000000000000000000000101000202210034170000121146437700000088695766
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................231427.00427005100000000003013310873422456452395301903042342431000000000000000000000000020000000001110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAT.............................................................................................................................................................241327.00327015200000000110100010003541159439818148111000000000000000000000005647512195718620741013
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCT....................................................................................................................181316.003162920001020000000000000040001000000000010000010100010000000000000000040723944524400000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG..............................................................................................................................................................231244.0024400131010000001000000000004223002311410200000000000000000000010008633281310512611210672223
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................221211.00211001510000000000310412027014926121710514100141891030000000000000000000000000021000100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................181193.0019312851611120000003101000337517414323141422500000001000000000010101030111715878410011
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTG...................................................................................................................191176.001760330101020000000000000013116010000000120000301123011010000000001011032241920152400000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCT.............................................................................................................................................................241172.00172510000000000000000000000000001110000110010000010000000000100000201117131212877168551322
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................221171.00171311326110000000000000300556931512518873520000000000000000000000010995141001035359
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................191149.00149101190000000000000001002101131121230032200000000000000000000000000000010000010001
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA..............................................................................................................................................................211141.001410070100000000011000010036739430993101519661000000000000000000000006320020013000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................211138.001381518531010000001030110021181132306005821120000000000000000000100011347130221210022
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA..............................................................................................................................................................221134.0013400780000000000000000000001174700460636410000000000000000000000002011000110000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACT.............................................................................................................................................................241124.001241120000000000000000000000010300400000100000000000010000000000000098811777912833513
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGG................................................................................................................221123.001239171040400000000000000000000000010010116000010000000000000004230000000864041000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................191116.00116178502000000000000000010000000100200000012000000000000000000001000000000001120000
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT................................................................................................................221106.001060031233010201010000000295234011521010221000000001000000000062101204242236603021
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18196.00960150102000001021022035074412123631678180000000000000000000001000010100030000100
................................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGTG.................................................................................................................22188.00881121322090503110101011121148000010243020000000000000000000001000143103111310121
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATCATC..........................................................................................................................................................27187.008710000000000010000000000011010001001000000001000000000000000000010161112524000332227
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................20179.0079004000400000000000000010001001011042523100000000000000000001001022110000000521519
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................21175.007500620000000000000000001000320001100000000000000000000000000000000000121000000001
.............................................................................................................................................................CGCCCTGCACACCCCG-CTGC.....................................................................................................................................................................................20167.0067007200000000000000000000000010000000001000000000010100000002000020001653810700001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATC.............................................................................................................................................................24166.00663017001000000000000020000000512100000000000001010000110001100000074324412012232
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAAT............................................................................................................................................................25162.006210200000000000000000000004410010102321000000000000000000000000010811320010152222
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGA................................................................................................................22160.00601021100010000000000000010210010100021020000000000000000000002102326420102243225
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC..............................................................................................................................................................23157.005770430000000000010000000010001092600000000000000000000000000000000022001041011110
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA..............................................................................................................................................................24157.0057002000000000000000000010038103202505113101000000000000000000000000000000000000000
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................18155.00550030100000000021000100002332130010111020000000000000000000000003047100000030135
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA..............................................................................................................................................................23154.00541002100000000000000000011100330220200210000000000000000000000000099520101210110
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAAA.............................................................................................................................................................22153.00530010000000000000000000006420120320588330000000000000000000000002020000000010000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC...............................................................................................................................................................22148.004841103010000000010031421100000011001000011000000000000100000000000002400020020000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................20146.00460040010000000001000111121202100211230101000000000000000000000001511023310000000
................................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCT....................................................................................................................19142.00420300000011000000000000000000000000000012000000000000000000000000001017765700000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAG.............................................................................................................................................................24141.00410021000000000000000000000100000100030110000000000000000000000000097211001002125
................................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGT..................................................................................................................21139.00390010020030100011000000120014100111011120000000000000000000011000023100001010021
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAAA.............................................................................................................................................................23139.003900260000000000000000000002001010000031100000000000000000000000000010000002100000
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGT..................................................................................................................20137.00371010001000100000000102104121300310010010000000000000000000001001121001111001010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................20136.00360210100000000001000001031210211310064210000000000000000000000000010000000000010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG..............................................................................................................................................................23135.00353010000000000000000000000000010000100000000000000000000000000000266300101121213
..................................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGC................................................................................................................21135.003500201000000000000000000000010001000000000000000000000000000012002000221110000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................21134.00340010000000000021010000112220220120424120000000000000000000001000000000000000000
.......................................................................................................................................................................................TACTTAGTGACTCTCAA...............................................................................................................................................................17131.00310000000000000000000000000000000000000000000000000000000000001002244300000080043
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCA...............................................................................................................23130.00300040000010000000000000000000000000000000000000000000000000000010002054714000010
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................18129.002900250000000000000000000100000200100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCCC..............................................................................................................24129.00298000000000000000000000000000000100000000000000000000000000010000000036224200000
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTT.................................................................................................................21128.00280000000000000000010001001000000000000000000000000000000000000000000034724500000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAAC............................................................................................................................................................25127.00270020000000000000000000000000000000000000000000000000000000000001054600000040221
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATCA............................................................................................................................................................25127.00270011000000000000000000000000000000000000000000000000000000000000024212101501132
............................................................................................................................................................CCGCCCTGCACACCCCG-CTGC.....................................................................................................................................................................................21126.00261001000000000000000000000000010000000000000000000000000000100000100072025500000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCAA.................................................................................................................................................................20225.00500000000000000000000001010334212140182300000000000000000000000000503001002020100
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCTT..............................................................................................................24125.00251000000000000000000100000000000000000000000000000000000000000000000032338400000
........................................................................................................................................................................................................TCATCTATTGCTT-TGCAT-ACCTT......................................................................................................................................23124.00240031000000000000000000102410000020000000000000000000000000000005400000000000010
..................................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGCT...............................................................................................................22124.00240000000000000000000000000001000000000000000001000111000000000000000021635200000
droMoj3
T-AGCTA----G-----------------------------------AG-------------------------------------------------A----------------GTGCCCG-A-----------------T--TCATG-------ATGTCCAGCACACGCTG-CAGCTCAGGTACTTAGTGACTCTCAATCACATATTGCTT-TGCAT-ACTTTGAGGGTCGCTCTGTGCCTGTGCCGC-----CCGTGTTGCACACAGCCACA-C-AA--T-TGTGAATTCGAGTTCGAACTCCCCGGACTAGAGAATACAAG--TGCAAGTGTCTTGTAAT------------GTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21149212.004921222712252526128423326104
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................22127227.002722714693157726641910170102
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2018978.0089782067150101142648830
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................2213124.00312488483242121102
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGC................................................................................................................2212579.0025792089816543119092
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2012226.0022262185502340
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA..............................................................................................................................................................2312119.0021191495807105198
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2111467.001467145810080
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................191813.008135491324182081
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA.............................................................................................................................................................241629.00629549915641
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA..............................................................................................................................................................231485.0048515016013180
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT..............................................................................................................................................................231445.0044515112032763
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................191221.00221209000120
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC..............................................................................................................................................................231192.00192364001520
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC..............................................................................................................................................................231178.0017886101630
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG.................................................................................................................211160.0016045392812306
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................191150.001501003811100
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGG................................................................................................................221149.0014901412600
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA..............................................................................................................................................................221147.0014714700000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................211139.00139524410690
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221129.0012953115672
.............................................................................................................................................................TGTCCAGCACACGCTG-CAGC.....................................................................................................................................................................................201106.0010613000930
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACAA.............................................................................................................................................................24188.00888210050
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................21186.00868600000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................20186.008663121730
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21172.00721625111190
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................19170.00700000700
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................18158.00585800000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAAA.............................................................................................................................................................23149.00494700020
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22143.004316200250
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCC...............................................................................................................23143.00430364300
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21137.00377411231
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT.............................................................................................................................................................24135.00357300250
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22133.00332431050
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACA.............................................................................................................................................................24131.003111100190
............................................................................................................................................................ATGTCCAGCACACGCTG-CAGC.....................................................................................................................................................................................21129.00292000270
..................................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGC................................................................................................................21123.00231710050
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT................................................................................................................22122.00221141330
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCA.............................................................................................................................................................24122.00225000170
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................20120.00201700030
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18120.00207000130
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG..............................................................................................................................................................23119.00191500040
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATA.............................................................................................................................................................24118.0018900090
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18118.0018641070
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................23117.00171310030
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................18116.00161400020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAT.............................................................................................................................................................24114.00143000110
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT..............................................................................................................................................................22113.00131300000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................21111.0011300080
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................19110.00101000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACAA.............................................................................................................................................................23110.00101000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA..............................................................................................................................................................2219.009900000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATC.............................................................................................................................................................2419.009200061
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC..............................................................................................................................................................2317.007401020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................2017.007100060
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................2017.007410110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC...............................................................................................................................................................2217.007321010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCT.............................................................................................................................................................2416.006010050
................................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGTG.................................................................................................................2216.006130020
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCT...............................................................................................................2316.006120030
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGA................................................................................................................2215.005100031
........................................................................................................................................................................................................TCACATATTGCTT-TGCAT-ACTTT......................................................................................................................................2315.005100040
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA..............................................................................................................................................................2315.005100040
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACT.............................................................................................................................................................2415.005000050
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA..............................................................................................................................................................2115.005500000
...................................................................................................................................................................................................................................GGGTCGCTCTGTGCCTGTGC................................................................................................................2014.004200020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCAA.................................................................................................................................................................2014.004110020
droGri2
A-GATAA----A---------------AAAGCGAAAGATTCGTTCGTCGATTGGTTCTTATTCTTGTGTTAATCATTATCAGTGTT--AAA-TGTGGAA----------------AA---------------ACCAATCCAA--TCCGCTGCACACG-------------TTG-CTGCTCAGGTACTTAGTGACTCTCAATTCAACATTGTAT-TGCACGCCTTTGAGGGTCGCTCTGTGCCTGTGTTGC-----ACGTGTTGCATTC-ACACCA-T-C--CG-AGTGA-TTTGTGT------------------------CC----TTTGAGTG-------TC-----------GATTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................2111712.001712169715
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................221530.0053051812
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................201204.002042022
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................201185.001851850
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................22184.0084840
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT................................................................................................................22168.0068608
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................19165.0065650
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................21149.0049490
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG.................................................................................................................21117.0017161
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21115.0015141
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................19114.0014140
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA..............................................................................................................................................................23112.0012120
........................................................................................................................................................................................................TTCAACATTGTAT-TGCACGCCTTT......................................................................................................................................2419.00990
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................2117.00770
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................2217.00770
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................1917.00770
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................1815.00550
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT..............................................................................................................................................................2315.00550
..................................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGT................................................................................................................2115.00550
........................................................................................................................................................................................................TTCAACATTGTAT-TGCACGCCTT.......................................................................................................................................2314.00440
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................2013.00330
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC..............................................................................................................................................................2313.00330
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCT................................................................................................................................................................2013.00330
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT.............................................................................................................................................................2413.00330
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................2212.00220
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTG...................................................................................................................1912.00220
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................1812.00220
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTG.................................................................................................................................................................2011.00110
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCT....................................................................................................................1811.00110
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT..............................................................................................................................................................2211.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTT...................................................................................................................................................................1811.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................2111.00110
...............................................................................................................................................................................TGCTCAGGTACTTAGTGACT....................................................................................................................................................................2011.00110
........................................................................................................................................................................................................TTCAACATTGTAT-TGCACGCCT........................................................................................................................................2211.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA..............................................................................................................................................................2311.00110
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2111.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................1811.00110
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAAAA............................................................................................................................................................2411.00110
...............................................................................................................................................................................................................................TTGAGGGTCGCTCTGTGCCT....................................................................................................................2011.00101
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCT..................................................................................................................................................................2011.00110
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGTT...............................................................................................................2311.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATTC............................................................................................................................................................2511.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCG..................................................................................................................................................................1911.00110
..................................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTG.................................................................................................................2011.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAGG.............................................................................................................................................................2411.00110
..........................................................................................................................................................................................................................CGCCTTTGAGGGTCGCTCTG.........................................................................................................................2011.00110
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGTTT..............................................................................................................2411.00110
............................................................................................................................................................................................................................CCTTTGAGGGTCGCTCTGT........................................................................................................................1911.00110
.................................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTT.................................................................................................................2111.00110
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................1811.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA.............................................................................................................................................................2411.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATGG............................................................................................................................................................2511.00110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAGCA.............................................................................................................................................................2420.50110
dp5
T-GTTTA----T-----------------------------------CG-------------------------------------------------A----------------GTGATTT-A-----------------T--CTACAAGCACACT-------------TTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACT-GCAACG-A-TT-AAGGGTGT--------------------------------TCCT--AATAAGTG-------TT---AT-------AATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21194649.009464973713373228517315643184829740373489
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................22178816.0078816375451034487152140573621261515963120
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2319293.009293164573711417616521137763
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2016809.00680906764514002267
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2016035.00603534437741711015119619270329132
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2115251.00525105192205004066
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................2412643.002643118748702500637181
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAC................................................................................................................2212583.0025830156084614012303415
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................2211582.00158241144104293163241137
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................1911381.00138135110418617420716919
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCA.................................................................................................................2111059.00105909973253001525
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................251908.009080672130300202171
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................231682.0068203583669422311620
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................221650.006500637100001020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221487.004871287825103105615
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGC..................................................................................................................201431.0043103742484001173
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................191394.00394038920100200
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................191382.00382132620223010810
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................201340.0034002730021413524
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................231202.00202019800000202
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAC................................................................................................................211187.001870173122000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................231185.0018501261816003310
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................231184.0018401034354102422
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................241171.001710791123106636
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAA................................................................................................................221157.0015701331220001000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................211127.00127012220100200
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................211127.001271065536522290
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................231121.00121584116400920
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................181104.00104010400000000
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCA.................................................................................................................201104.00104010220000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22184.008406821310351
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................24183.0083037700003441
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................24176.007607600000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22167.006705410501600
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23167.006705910100501
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTG...................................................................................................................19165.006506210000110
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................23163.006305131020510
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21159.005914021701250
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................18158.005805800000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................24153.0053010200004001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................24153.005304500000800
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................24153.0053032600001500
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................21153.005304200000911
................................................................................................................................................CTACAAGCACACT-------------TTGCCGGC.....................................................................................................................................................................................21150.0050032601000110
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................22150.005004400000600
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18143.0043112730001514
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21142.0042012431620050
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................19137.003703700000000
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGC..................................................................................................................19134.003403310000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------CTC...................................................................................................................................................26128.002800000002800
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................24127.0027011000001501
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................20123.00230600010880
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18122.002201400230120
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC....................................................................................................................................................25121.002101001100540
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................22121.002101910000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................20120.002001102000070
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TT....................................................................................................................................................25120.00200720000911
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------......................................................................................................................................................23120.002009000001010
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................21120.002002000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................24120.002001440000200
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................22119.001901800000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.....................................................................................................................................................24117.001705100001100
................................................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCTGCA.................................................................................................................22116.001601200000400
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAA...............................................................................................................23114.001401300000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCTT...............................................................................................................................................................22114.00140900000050
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCACA...............................................................................................................22114.001401300000001
.................................................................................................................................................TACAAGCACACT-------------TTGCCGGC.....................................................................................................................................................................................20113.001311010000001
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................18113.001301100100100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.....................................................................................................................................................24113.001303000001000
..................................................................................................................................................................................TCAGGTACTTAGTGA......................................................................................................................................................................15112.00120000000624
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCACC...............................................................................................................23112.00120731100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA....................................................................................................................................................25112.00120310000800
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AAA...................................................................................................................................................26112.001201000001100
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................22112.001201110000000
................................................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCTGC..................................................................................................................21111.001101100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACT....................................................................................................................................................................17111.00110000000641
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAA................................................................................................................21111.001101100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATG--------......................................................................................................................................................23110.00100000000820
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.....................................................................................................................................................24110.00100230000131
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCT...................................................................................................................................................26110.00100510000310
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TAC...................................................................................................................................................26110.00100000000640
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................1919.0092250000000
.............................................................................................................................................T--CTACAAGCACACT-------------TTGCCGGC.....................................................................................................................................................................................2219.0090620100000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA..............................................................................................................2419.0090900000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCCT...............................................................................................................................................................2219.0095100100020
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................2319.0090900000000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2019.0090810000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------TT....................................................................................................................................................2518.0080200000600
.......................................................................................................................................................................................TACTTAGTGACTCTCAA...............................................................................................................................................................1718.0080000000503
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT....................................................................................................................................................2518.0080600000200
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC...............................................................................................................................................................2218.0080104000210
..................................................................................................................................................................................TCAGGTACTTAGTGACTCA..................................................................................................................................................................1918.0080000100403
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2117.0070501000010
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCT.................................................................................................................2117.0070601000000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGT..................................................................................................................2017.0070700000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................2217.0070700000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCAA.................................................................................................................................................................2017.0070000000511
........................................................................................................................................................................................ACTTAGTGACTCTCAA...............................................................................................................................................................1617.0070000000304
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCT................................................................................................................................................................2017.0070700000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................2017.0070600000100
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAT................................................................................................................2217.0070510000010
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCC.................................................................................................................2117.0070610000000
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCACC...............................................................................................................2216.0060501000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------TA....................................................................................................................................................2516.0060000000204
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCACA...............................................................................................................2316.0060510000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.....................................................................................................................................................2416.0060500000100
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................2216.0060600000000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTT...................................................................................................................1916.0060600000000
........................................................................................................................................................................................ACTTAGTGACTCTCA................................................................................................................................................................1516.0060000000303
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAGA--------A.....................................................................................................................................................2416.0060200000400
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------CA....................................................................................................................................................2516.0060000000501
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GA....................................................................................................................................................2515.0050000000500
..................................................................................................................................................ACAAGCACACT-------------TTGCCGGC.....................................................................................................................................................................................1915.0050500000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------A.....................................................................................................................................................2415.0050400100000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2415.0050500000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------C.....................................................................................................................................................2415.0050001000400
................................................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCT....................................................................................................................1915.0050500000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2315.0050400000100
droPer2
T-GTTTA----T-----------------------------------CG-------------------------------------------------A----------------GTGATTT-A-----------------T--CTACAAGCACACT-------------TTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGG-----CGGTGGTGCAACT-GCAACG-A-TT-AAGGGTGT--------------------------------TCCT--AATAAGTG-------TTATAT-------TTAGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................22149916.00499167364742991342834466
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21145389.00453891114418841607389284111
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2114627.004627046270000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2014043.004043040374110
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2313874.0038741203655811170
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2013161.00316189017927920613856
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................241764.007646567821000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................191759.00759502201926183
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................221610.0061042537101551
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................221348.0034803480000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................251259.00259262285000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221245.0024562344010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................231232.0023262187100
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................201226.0022602171530
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................191205.002050176171020
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................191166.0016611650000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAC................................................................................................................221161.0016181389060
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................221152.0015211501000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCA.................................................................................................................211111.0011101071210
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................23185.008532476000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................23176.00760760000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................23170.007015514000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................21168.00680680000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................23166.00665582100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21144.00441985525
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................23140.00400400000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGC..................................................................................................................20133.00330320001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21131.003117122000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23130.00301290000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21127.00277510311
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................19126.00262510000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAA................................................................................................................22125.00250250000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................18123.00230230000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................19123.00230230000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................24122.00220220000
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAC................................................................................................................21122.00220220000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................22121.00210210000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22121.00210192000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................24121.00210201000
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18120.00201450100
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................18119.00191180000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................21119.00190190000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................21117.00170170000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18115.00150100320
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................24113.00133100000
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................18112.00120120000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................24111.0011290000
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCA.................................................................................................................20110.00100100000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAG...............................................................................................................................................................21110.00100100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................24110.00100100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................24110.0010280000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAGA--------......................................................................................................................................................2319.009090000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................2218.008080000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................2218.008710000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2218.008080000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCT...................................................................................................................................................2616.006510000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------......................................................................................................................................................2316.006051000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................2016.006040110
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGC..................................................................................................................1916.006060000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................2216.006060000
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTG...................................................................................................................1915.005030002
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2015.005050000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCG..................................................................................................................................................................1915.005500000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCA..................................................................................................................................................................1914.004040000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.....................................................................................................................................................2414.004040000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2114.004021010
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAA...............................................................................................................2314.004040000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC....................................................................................................................................................2514.004130000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................2414.004220000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TA....................................................................................................................................................2513.003030000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.....................................................................................................................................................2413.003030000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................2013.003021000
..................................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAA................................................................................................................2113.003030000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT....................................................................................................................................................2513.003030000
................................................................................................................................................CTACAAGCACACT-------------TTGCCGGC.....................................................................................................................................................................................2113.003110100
.................................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA..............................................................................................................2413.003030000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................2213.003030000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2312.002020000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------C.....................................................................................................................................................2412.002020000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.....................................................................................................................................................2412.002020000
droAna3
A-TTGGA-------------------------------------------------------------------------------------TGTGAAA----------------GT------------------------G--CCAGAAGTCCACT-------------TGG-TAGCTCAGGTACTTAGTGACTCTCAAT--------GCAT-TTGAC-ATTTTGGGAGCCACTTTGTGCCTGGGCCAT-----CAGTGCGACTATA-TCTTCT-A-TT-AA-AAAAA--------------------------------TT-----GTTTAAA-------AT-----------ATATSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21115411.001541194572974218513150614
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................22110973.001097377351114124817523678
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGC................................................................................................................2213408.0034082552465595522705
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2013234.003234556212522715113162
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2311146.001146606239140172142
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................201922.0092291543000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................211740.0074073910000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................221522.00522169272552222
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................191352.00352167741855137
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGG.................................................................................................................211347.00347170439511460
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCT...............................................................................................................231246.0024670221234
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................241218.0021810356391118
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................231164.001642312513012
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221105.0010571159604
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGG..................................................................................................................20196.0096502014318
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................23191.0091374311000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................23178.007848224004
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................19177.007759213300
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21172.007240106709
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................23165.0065154010000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCA...............................................................................................................23164.00643003256
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................22160.00606000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................20160.006047010300
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGT................................................................................................................22151.005110700925
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21150.00502637113
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................19149.00494900000
..................................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGC................................................................................................................21146.004621120022
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................25140.0040181011001
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGA................................................................................................................22139.00392311230
...............................................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTGG..................................................................................................................22139.00398218002
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23134.00342351005
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22133.00333001002
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................24128.00283241000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................19128.00280280000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCC...............................................................................................................23123.00232125013
..................................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGG.................................................................................................................20122.00222200000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21121.0021435414
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22117.0017845000
..................................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCC...............................................................................................................22114.0014530105
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGT.................................................................................................................21114.0014520115
...............................................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTGGG.................................................................................................................23113.0013332005
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................24113.00132101000
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................18113.00131300000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTT...............................................................................................................23112.0012300108
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18112.0012451200
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCTT..............................................................................................................24111.0011110009
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................21111.00111010000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................22110.00101000000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGG................................................................................................................22110.0010003403
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................24110.0010630010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................24110.0010901000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................18110.00101000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18110.0010613000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTG...................................................................................................................1919.009700200
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................2318.008800000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2318.008512000
................................................................................................................................................CCAGAAGTCCACT-------------TGG-TAGC.....................................................................................................................................................................................2018.008022103
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................2018.008510002
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------......................................................................................................................................................2318.008321002
..................................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGG..................................................................................................................1918.008620000
..................................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCT...............................................................................................................2218.008020006
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................2017.007240100
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2117.007240100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................2417.007601000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................2117.007700000
..................................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCA...............................................................................................................2217.007002005
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................2416.006420000
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................1815.005500000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGC.................................................................................................................2115.005020003
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................1915.005500000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCT................................................................................................................................................................2015.005500000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTTT..............................................................................................................2415.005200012
.................................................................................................................................................CAGAAGTCCACT-------------TGG-TAGC.....................................................................................................................................................................................1915.005040001
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2214.004400000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................2214.004310000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTA...............................................................................................................2314.004010102
................................................................................................................................................................................................................................TGGGAGCCACTTTGTGCCTGGGC................................................................................................................2314.004200002
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................2214.004400000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................2414.004211000
...............................................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTG...................................................................................................................2114.004130000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.....................................................................................................................................................2414.004400000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2413.003300000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................2013.003201000
.................................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGAA...............................................................................................................2313.003030000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................2313.003300000
...................................................................................................................................................................................................................................GAGCCACTTTGTGCCTGGGC................................................................................................................2013.003100002
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2113.003201000
droBip1
G-AAAAA----T-----------------------------------AT-------------------------------------------TGTGAAA----------------GT--TGA-C-----------------C--CGAAAAGTCCACT-------------TAA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GTAT-TTGAC-ATTTTGAGAGCCACTTTGTGCCTGGGCCAT-----CAGTGTGGCTATA-TCTTCT-A-------------------------------------------------------------------------------TATSizeHit CountTotal NormTotal
No Reads
droKik1
T-AAGTA----TATTATATCAGTGTAAAAAGTGCAAGATATTTTCAAAATTTAGTAATTAATTAAGTGT--ATTTTTATCAGTGTA--AAAAAGTGCAAGTGTTTTGTGTTTCAAGTGCTGT-A--------A--------T--ACCAGTGCCCACT--------TG--ATGA-TGGCTCAGGTACTTAGTGACTCTCAAA--------TGCCTTGAAAAGTTTTGAGAGTCTCTCTGTGCCTAGGCTGT-----AGGTGAGGCAAAC-TCAACT-A-CA-TA-CATCA--------------------------------A--------------------TT-----------AAATSizeHit CountTotal NormTotal
No Reads
droFic1
A-T-CAG----T-----------------------------------GG------------------------------------------CTATAGCA----------------GTGCATA-T-----------------T--TTCTGTGCTTGCT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GGAT-TTCAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----AAGTAAGACATTCTCCTACA-A-AAAAA-AGTGT--------------------------------TAAA--AATAAGTT-------G----ATTACAACAGGTSizeHit CountTotal NormTotal
No Reads
droEle1
ATATCAG-------------------------------------------------------------------------------------------------------------TATATTTATAAGC---GTGCATTTGA--TTTTAAGCCCACT-------------TGA-TTGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCAATG-TCTACA-G-GT-AA-AGTGA--------------------------------TAAA-------------------------------TATSizeHit CountTotal NormTotal
No Reads
droRho1
T-GTCAG-------------------------------------------------------------------------------------------------------------TGTATATCTCAGTA--GTGCATATAT--TTTTGAGCCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGC-----CAGTGAAGCATTC-TCCCCA-T-TA-AA-AGTGT--------------------------------TAAC--TATAATTG-------C---------AATAAAASizeHit CountTotal NormTotal
No Reads
droBia1
T-GCTTG----T-----------------------------------GGA--------------------------------------T--------AA----------------GTGTTTT-ATCAGTGGAAAAT----GA--ATTCAAGCTTACT-------------AGG-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ACTTTGGGACTCGCTCTGTACCTGCGCTGC-----CGGTGAGGCCCTC-TCTACA-A-AG-AA-ATA----------------------------------CAAAATAGTATATA-------TA-------ATATAAGASizeHit CountTotal NormTotal
No Reads
droTak1
ATG--AGTGTAT-----------------------------------ATT-----------------------------------------ATATATCA----------------GTGCATA-T-----------------CTCTTTTAAGCCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TCGAC-ATTTTGGGAGTCGCTCTGTGCCTGCGCCGC-----CAGTAAGGCATTC-TCCACAGAAAT-AA-AGTGT--------------------------------TAAA-------------------------------TAASizeHit CountTotal NormTotal
No Reads
droEug1
T-ACAAA----T-----------------------------------GGA--------------------------------------TCAATGTGCAA----------------GTGACTA-T-----------------T--TTTCAAGTCCACT-------------TAA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GATT-TTGAC-AATTTGGGAGTCGCTCTGTGCCTGTGCTGC-----TAGTGAGGCAATCTTCTACA-A-AT-AA-AGTGAA-------------------------------T--------------------------TT-----ACATSizeHit CountTotal NormTotal
No Reads
dm3
G-TTTAA----A------------------------------------------------------------------------------------TCA----------------GTGAATA-G-----------------T--TTAAAAGTCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAA-TCTACA-A-AT-AA-AGTGA--------------------------------TA-----ATCAGTG-------AT------------ATCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................211766317.0076631700104812501436525227922645101600296348410456020627131781202469238110145517391811258216911756432134623241002404169873013282089417521381480569432530342517000000000000000004646346744385693216411112724949591263112292022101591105831399866147737823120254551108825592793205039027422109412509642068011467710703302773461826217922112021717479168135210413371471171814919013912520823843323401226571458019812661313716242143169243262281657344949786060994203214063165272603733464902738351912022666129264819932812948634520132421192025392344212356981084494023114287287663103519161410338900743670612516271127141425302474513614320180342679239521230845523317341118320400357436316123842243433721401917707133426141274155648952120608391251474410648209266920371690399531220514942391527381947880261115861141476901846131301246952327941751297242714711610719940911421165328418945850397117457850466331043323273817511787366433713473309263672849224424361197672114521860938938912418512909135413300
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.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.................................................................................................................21119913.0019913000034552031522637320064120120152451118113104541011153721343310122130001612000000000000000000777647541115772788073819813481112216914383995161868420615146515922259289435547733128338224531361010022301431671098614444758801329131210016977001106072309764025311917245013310825410226028000661221100101000101130000009221623371518710318017919929917620518341444000023161026512388451433262445191001250146052841481615324781111453373012321119136122142139614917391513111133119103780220065353411911809108201324352930755001407319221965
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..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................23111775.0011775000000000000010000003112060080100000024153121391358617516897120126000352120000000000000000001671761311180100145031002101030000310111234604028012091000502040460000391212928478872313703857281114422313143013060001618051007041131131004004112951100011268000012733000000061153145164111155546276813821056646906190013131008308320228133478121101420352551910122113272613113823302214521545213513926720425632610102130581901630031061039131032212402923171081246128134124310
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................22110830.001083000000001100100000000717125007000000013610815334436717514126549117000000000000000000000003143112762340546512520000205200030041533112201010002700001110140419011008711607224815221734392724101515291041201700413043520290062412202501500093020264476000110300100011140000003018111212157335454536477811084480961310016320023016535267138121341234165066192025824256541257272148222922336200242673829311415243725152001222913471926023816718516420573480192032218256640430
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................2317445.007445000000000000000000001100000000000004221211026201113113135332820000000000000000000000024221722000602010000010110000001251200001001400000010113100006342908824981139193210224144213256100000071000002000020340633020101300011052414381100000046242152389223927035613956953702833810211000300111393472145121213207325021124274126542316429149138257489131091220940013067203134605005955351766022007102122160491574036646120
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..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2314647.004647000000020000000000001020000000000002143503039302211124536110000000000000000000000030353625061012100000010100000000236000020000150100110040650000506420213131749121850812511014000010006601001001020310100080320000000000100410000000045026066502352223637524672984377002155000002191126223132510102106135151734229724358536630031310103000203130790101549476120021218001012104612660
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................2114427.0044270000000000000100000031300030000000024164217236217016137931119118373430000000000000000000000063453883120020222000017800001000814206200100411846963858501311651155583146002141330013512379123441160356011001441641495502910110001030002606041000010060000003000000312622111194441781900020000620220141136403612313082004542514311511132128114334121564612140171160100901012100001306220426223140101203100112600100110134200
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................2314341.004341000002020000000001000010002000000002202109111111024120100000000000000000000000637855410314141000010000000000028420001002006000020100101001013121120146101114112112211030000000081304000606020200000042000000000002000010000000001315217572191371718963784705541001000000021630315002111123301155390310846104100732300103111240021014140201101722510131112002001000201518210
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2514080.004080000000011000000000001120000000000023317310247121918111788000000000000000000000000151613901219028000100101010000002030000040040100000000102300005101300627552515614191015028960010000000076010013030403000000020520120000061601001265600000000016610486140140142642410232586000002000001012000314000200100000203042160171186439671268200102000100101236142100001141817310000000100006636204000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................2313174.003174000000000100000000001011000000000003111250184911310485913410000000000000000000000017231610034112200000000100000001330001010041276010013091311200002215504935337434040150240100001003010000000104003100011120000000000001000000020086223721651481605213102002944400240200100139105236211035125302200070812316570184316680100200006000002726650500145542201001000000000121205060
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG................................................................................................................2212518.0025180000000000000000000000000200000000000100223112011041000000000000000000000000110012230185228140132752826101510159801095377032585336401166216122915150317051040025000000200000201100101000000000001113071040141010231600010003000000000000000000000000000000000100110010100000000019331926216251577293410562019381233194238000000100100000000000000000050040000000000000000000000000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................1811703.0017030000000000000000000069000000631010001101010110001000000010250000000000000000015621121410904000001000000000000200514407000012000000000001802242121114201104821200113030000022500000000030110003161011001116001330000100020021030000000002349222191317516131425200512000100001000000101000013112076381311466701011201190603401000000114301010001310000000000100000000013001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................2411587.0015870000000000000000000000200010000000012224157012112873000000000000000000000000262522200001111100000100000000012130200011004000010003132000002410007800273672073201100000000180300120005040000005370100040100000018000000300513201186498135160156102107400492001205111010103101000061022107021111492742731375930002211101002084112000054412201000010100300200337030
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------C.....................................................................................................................................................2411497.0014970000000000000000000000000000000000000000000100000000000000000000000000000000301100000000000000000000000010000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000100220030310000876600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2011242.00124200000000000000000000020000101000000204131222126031140000000000000000000000006171554506003571300400421000010041128443502003311224012051248020550000003201812300335143205000002205100323801710731226127042000010331001200000400000010000003427514193097172017290001000001000250100111014100000102063426217371103220112112000120000013020000297105200000010000100000010000
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.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT................................................................................................................221939.00939000010040004020000000010000000000000100101030000011300000000000000000000000086120610229323404064273440013113914072108132710130076010110000030020100201010101001021000000000000000002190212043102152010004000000000050000000000000000010124761216140100000000000131147141110391210101221015413001322121801011201000002003000001802810300000100110000001230220
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................211876.0087600000001010000000000010000100000000200010230131517340000101000000000000000001729252404013123210000001000000011480301000010900101100104300000123001340214320011500000106120002844016008241310130250030101001030100005000500200000012157102418633023243800000000000003400001100010001110330544212165031752431820002000100010021610000073312211000010000000001000000
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....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................181758.00758000000000000000000002610002000000002221319317000041200000000000000000000000071797061000000110010000000000000050300000000100000000000100100000005814110731342411431030000000024010020010200000020123210000010000000100000000141146922209192800000000000004420020121040051412127197138671717210124031210311111010201200010000101402000210200100100105000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................221722.00722000000001001000000000311000000000001001104300111343140000000000000000000000015171414030111000010000100000001130000000000300000010212000003002510131012151001000100000000011100510240115060000008340000000000000077000000000513123518172245352540100000000005113011120110011200202316211602122781822662900204011020002041303050002511402000101100000411025000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................211682.00682000010500104100000001101000000000000102400200201311001000000000000000000000020171213011223200000010210010004111183212000219180504371506300001011103211001013100010000001000026260150004060501000000091120000200100000150000000006943891661066100300000200012111343141111323400304311196722262211321421702014100110001065011000113412402001000200100001102110
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................221594.00594000000000000000000000000000000000000230010100120041100000000000000000000000055574839000000010000000000000110000000010000010020011000000000000000820702344521000101002060005103000204000700000030011000000800000000000000265103132196101515260000000001010661232512203211012200031642200646450400001000010001023010100289012200100000100000000001000
..................................................................................................................................................................................TCAGGTACTTAGTGACT....................................................................................................................................................................171566.00566000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000144108801161059491001051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC...............................................................................................................................................................221478.0047800000000000000000000010000000000000161010626001023625100000000000000000000000000110100002100000000100000000010000000000213430000000250362400000010200120001110023320000000003050030002000000000000000000000000000000300000000200003213051200000000010045112300010012000000000012011000400450400000000000000016100040011000100000000000000000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................241466.004660000000000100000000000100000000000001100005000102221000000000000000000000000786600000000000000000000000001004000010000000000000000000000000002001513001102011000000000101000000000000000000000000000010001110000000003111048142038725622250000000010000012000001200001200000010300143209092120010000100000002502010000020000000001000120000303020
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................231454.0045400000000000000000000000000000000000101010020020124300000000000000000000000002827102100000000000000000000000000300000000000000000000000000000000012001714230014000000000002001000100010100000000110000300000000120000000005100231733193014270000000020010472300111001000001013062630114131931941000111100010000061223000061257001000000100000000014000
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................................................................................................................................................TTAAAAGTCCACT-------------CGA-TGGC.....................................................................................................................................................................................201355.0035500000000000000000000101000000000000120040074100111500000000000000000000000000000000000000000000000010000001000000000010000010000000000000002000010101010010000000000000000000100000000000000010000000000000000000000035008917302036232134200200000000004100000100200100110001020100000000000010000000000002400000020130000000000100000000002000
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..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................241343.0034300000000000000000000000000000000000010000030000025020000000000000000000000003545000000000000000000000006120000000000100000010003100000010200100010001000001000000000011000000010002000000000000000000000000000000000002003614172355422728000055000000020010000000000010000000011000080201000010000001000003510000010100000000100000000000001000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA...............................................................................................................231338.003380000000000100000000000000000000000000000000000000000000000000000000000000000631210000120801500122300002203614332464120030000000000020000000100000000000000000000000000000001100001023010000000040000000000000000000000000003000166211711161314000010000000000000000001000100000000000011110000000001000000000100000000010000000010000100000000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................201326.0032600000000000000000000000000000000000000000100000011200000000000000000000000002834332900000002000000000000000010403000000020000110020290000000000011402020200000001001000003120200010100000000100101000000000000000000000100100018410614200000000000042000200221000631427109564423041211000310200000000001000000010210501100010000300000110110
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................201315.00315000000000000000000000100000000000000020306110105954000000000000000000000000023330000000000000000000000000300000000001000000000000000002104012400133000200200000000000010000000000000000000030000000000000001000000000100035718344361815000000001000001010003000100110101000101000150118260000000100000002802000010010000000000000000000030000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................241306.00306000000000000000000000000000000000000030401200103101010000000000000000000000031010000000000000000000000001000000000000000000000000000001000022382122430022200000000000000000000000000000000100000010000000011000000000030037461741222024000012000102000001001000000000000002002000010111901100000000010000021003000000302000000000000000100000020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................241277.00277000000000000000000000000000000000000140002400001570110000000000000000000000020010000000000000100000000000000000000000100000001032000001000120611200000140200000000000000000000000000000000001100000000000002000000000010022711339289140003000000010310000000000000000001001000004937251180000000002000004832000010101000000000000000000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.....................................................................................................................................................241275.0027500000000000000000000001000000000000000000000000000111000000000000000000000007976000000000000000000000000200000000000010000100000000000000100010000000000000000000000013000000000000000000000000000000000010000000000000003216112236152411100100000000100000100010000000100101000010130419320000012000000002301000011101401000001100100000713000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................241260.0026000000000000000000000101000000000000100000010000054100000000000000000000000001000004000000000001000000000000000000000000000010010000000000000411002000000000010000000002000000000000000000011000000000000001100000000030003286949381931000000000001010000000000000000100000001001171502110000000000000003000000000000000000000000000100100000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA................................................................................................................221215.002150000200110021100000000000000000000000000010000000000000000000000000000000000132103000149003012000000200151414221100010000200000000010002000000000201010002110000000000000040120000003230000005000000000000000000000000000100021211141000200000000152111100001001000110001100000120301021101100000000000100010052700400000100100000000020101
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------......................................................................................................................................................231208.0020800000000000000000000000000000000000000000000001000000000000000000000000000002614000000000000000000000000000000000000000000000000100000000000020000000000100000000000000000000000000000000000000000000000000000000000000001113211200007495000000000000000001000000001000000000020102010000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................221202.0020200000000000000000000000000000000000100000010000101000000000000000000000000002102000000410000000000000001142120000001001000000100010000000300001200001110100010001006000120100020202030000104000000000000000000000000371010014513141147100000000100000000000000000010000001100071213400041000110000000002300000001000000000000000000000110010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................201178.0017800000000000000000000002002100000003000010130000011300000000000000000000000001217790010000000000000000000001110000000000000011100000000000000032400112010000000000000000000100000100002000000221000000100000000000000001001123111322000200000000100000101210000200100006342201471021130102201100000000000000000000400000000100200000003010
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTT.................................................................................................................211154.00154000000010000001000000000000000000000000001000000001000000000000000000000000011100130005600000000000020041111270011003000000000000011000000000000000001100000000000000000130100000000000000000000000000000000000000000000000042236106200000000000022222000100300400110000000040000100000000000000000100200030050000000000000000100000000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG...................................................................................................................191144.00144000000000000001000000000000100000010000200000010000000000000000000000000000033140000000600100101010206056143701010030000000000000000020000001000000000000000000000000002100201004002801000100000000000000000000000000000000000010010000000000000000000100000000000000001000000000000000000000001000100000000020000000000000000000000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................191138.0013800000000000000000000000000000000000001000000000010100000000000000000000000001516121000000010000000000000000141010000000000001010000100001000000000000000000000000010000000170100120201040000105000000000000000000000000100010102110301000000000000000000000000000010002000111000131115000000100010000000000000021000000000000000000000001000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT...............................................................................................................231137.001370000000000000100000000000001000000000000000000000000000051000000000000000000120000100145002003020001010925221002000010000000100000001100000000000000010000000000000000200001220001211000005000000000000000000000000000000021437531000001000000010101010101000000000100000100010001010010000000000000101010000000001000000000000000000000
.............................................................................................................................................T--TTAAAAGTCCACT-------------CGA-TGGC.....................................................................................................................................................................................211129.001290000000000000000000000000000000000011001000100001120000000000000000000000000000000000000000000000000000000000000000000000000000000000011000200000000001100000000000000000000000000000000000000000000000000000000000001000222913196724000000000000010000001000000100101001000100000000000000000000000000100000020000010000000000000000001000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCA..................................................................................................................................................................191121.0012100000000000000000000000000000000000101010100000000000000000000000000000000006834020000000000000100000000000000000000000000000000000000100000100001100000000000000000023030001702222001000000022000000010000040001000120020001102022000000000000000000000000000100000000110000041002000000000000000000200000001000000000100000000000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.....................................................................................................................................................241116.001160000000000000000000000000000000000000000000000001000000000000000000000000000511100000000000000000000000001000000000000000100030000000000000011100011011000000000000000002000000000000000010001000100000000000000000000000114541110812100010000000100000000000000000000002000001030212060000000000000000200000001000100000000000000001000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------......................................................................................................................................................231112.001120000000000000000000000000000000000000001000001000010100000000000000000000000554500000000000000000000000000000000000030000101000100011001100100001000100000000000000000000000000000000000000000000000000000000000000000100421488531001000000011100001000000000011000010200002406021100000000000000002000000001000000000000000000000000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.....................................................................................................................................................241109.001090000000000000000000000000000000000200000001000000310000000000000000000000000210200000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000100000000000001200133681211117000000000001010001000000010000000001000000020200010000000000000001101000000001100000000000000000122000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................221107.001070000000000000000000000000000000000000000001000000000000000000000000000000000153216270000002000000000000000001500000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000001200000000000000000000000000000000000000000000000011000000000000000000000000010000000000000000000000000000
droSim2
T-GACTT----T-----------------------------------AGT-----------------GT-----------------GT---TTAAATCA----------------GTGAATA-G-----------------T--TTAAAAGTCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAA-TCTACA-A-AT-AA-AGTGA--------------------------------TAAG--TACCAGTG-------A----AT-------TACSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................221702880.00702880384243331751854500147767144040204615173123606812351116217
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................211329182.00329182493358951311393000615866195610547270084287525062990001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................231150060.0015006012511317742150003182528191506313430265613933004
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................24145517.00455171322312836500817170921771211778941533001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................22144759.004475910172159174780011428111571122081001359002000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................20138898.00388984459490530670700307935531054995161078142513001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................25116623.0016623295378700281624166908427149401000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................23110379.0010379328610651994260014811263720499212201001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................1919389.009389461242219088200272269906752152904001
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................2313809.003809403893133007135661158103527600000
..................................................................................................................................................................................TCAGGTACTTAGTGACT....................................................................................................................................................................1713583.0035830000004546971623232000100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................2313096.00309615547348480071369169138671000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................2212564.002564632248770040643671477520300000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2312347.00234743108038005665206104648710000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2111942.001942102175900192954687300000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2011318.001318304122300111139233100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................2411307.0013070059002252024853719100000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC................................................................................................................221798.007982023320028631413497773010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................231783.007831801132002041981751403200000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................191675.006754833115900001001000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................181623.0062373224120022257354307101002
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................201594.0059420286007574155117701300000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................211557.005572735550800342746504901000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.................................................................................................................211480.00480200320019818062451014000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................211458.0045895221413900505231213400000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................241445.0044502320083621671223001000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................241433.004331023500110561241145003001
........................................................................................................................................................................................ACTTAGTGACTCTCAA...............................................................................................................................................................161402.004020000001095793233000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................191284.00284403470022436244421700000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................241275.002753262004448109601000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................241272.002723214600636164571100000
.......................................................................................................................................................................................TACTTAGTGACTCTCAA...............................................................................................................................................................171265.0026500000038371083943000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................241241.002412013400554972451000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................221233.0023300017300121917111000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................211192.0019252691001211443731700000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................221178.00178123178001113454225200000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA....................................................................................................................................................251175.00175001200263170440001000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................241167.00167057600204435491000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AAA...................................................................................................................................................261159.00159001000222462481010000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------......................................................................................................................................................231147.00147213000382952220000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------T.....................................................................................................................................................241124.00124195614000135881000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------AA....................................................................................................................................................251119.00119000000201448361000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCG..................................................................................................................................................................191113.001136194300000000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.....................................................................................................................................................241106.001061101700029212170000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.....................................................................................................................................................241104.00104306200231834180000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................211103.001030006001020362110000000
..................................................................................................................................................................................TCAGGTACTTAGTGA......................................................................................................................................................................15292.0018400000021311418100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------......................................................................................................................................................23189.00891061700010191870200000
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................18177.00770000005261054000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................19173.0073104600000422000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................21170.00700004800071041000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------A.....................................................................................................................................................24168.006800010091228180000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................20165.00651032002930171000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................23159.0059001390013950100000
.......................................................................................................................................................................................TACTTAGTGACTCTCA................................................................................................................................................................16158.00580000006628513000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA................................................................................................................22156.00560010003015315001000
.........................................................................................................................................................................................CTTAGTGACTCTCAA...............................................................................................................................................................15156.0056000000463835000000
........................................................................................................................................................................................ACTTAGTGACTCTCA................................................................................................................................................................15152.00520000002171725000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................23146.00462012000251042000000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................19145.00450009000311814000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCT....................................................................................................................18145.00451623300000003000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT....................................................................................................................................................25144.00441000008517130000000
..................................................................................................................................................................................TCAGGTACTTAGTGAC.....................................................................................................................................................................16141.0041000000248615001014
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TT....................................................................................................................................................25141.00410010007710160000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------TA....................................................................................................................................................25141.00410100001271650000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................20135.00351003001041250000000
........................................................................................................................................................................................ACTTAGTGACTCTCAAA--------......................................................................................................................................................17234.506900000053131434000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................22134.0034000100569121000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18133.003360220023548100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCC...................................................................................................................................................26132.0032111800042330000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22129.0029101100051442100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GCCT-.................................................................................................................................................27127.0027511500004200000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................20127.0027131130021321000000
.......................................................................................................................................................................................TACTTAGTGACTCTCAAA--------......................................................................................................................................................18226.5053100000892834000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCGC...............................................................................................................................................................22125.0025000000108330100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TAA...................................................................................................................................................26123.0023000000137120000000
......................................................................................................................................................................................GTACTTAGTGACTCTCA................................................................................................................................................................17123.0023000000004217000000
....................................................................................................................................................................................AGGTACTTAGTGACT....................................................................................................................................................................15122.0022000000000022000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCAA.................................................................................................................................................................20122.002210000028542000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG................................................................................................................22122.0022000000000002200000
droSec2
T-GACTT----T-----------------------------------AGT-----------------GT-----------------GT---TTAAATCA----------------GTGAACA-G-----------------T--TTAAAATTCCACT-------------CGA-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCCT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACATAA-TCTACA-A-AT-AA-AGGGA--------------------------------TAAG--TACCAGTG-------A----AT-------AACSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................22134533.00345333133312418161260
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21124680.0024680220369815431003
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2112835.0028352832012
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2312680.002680223615183246
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2011965.0019651963011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2011531.00153185328366284
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................2211430.0014301289104982
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC................................................................................................................221315.0031521554253
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................241312.0031225512432
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................231250.002502244184
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................231237.0023715862053
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................191218.0021813604636
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................221205.00205205000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221198.0019817301213
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.................................................................................................................211197.001971821311
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................231144.00144134073
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................201144.001441181187
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................211123.00123123000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................231119.00119111062
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................19192.009275098
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21186.008686000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................19179.007978010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23170.007059083
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................25156.005643085
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................24134.003433001
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................23127.002727000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................23124.002423010
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................18124.002424000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21123.002312218
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................21121.002121000
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG.................................................................................................................20120.002020000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22119.001918001
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22116.001615010
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................19115.001515000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................24115.001514010
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................22114.001414000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA...............................................................................................................23113.001312010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................24113.001310210
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................22112.001212000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................22112.001212000
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC................................................................................................................21112.001211001
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18111.00115033
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................21111.00118012
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................18110.001010000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................2019.0099000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2219.0099000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................2419.0097020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------......................................................................................................................................................2319.0097011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................2418.0088000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAG...............................................................................................................................................................2118.0088000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT................................................................................................................2217.0077000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------......................................................................................................................................................2317.0077000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................2417.0076001
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................2216.0066000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCT................................................................................................................................................................2016.0066000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................2015.0053011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCAA.................................................................................................................................................................2015.0052030
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................1815.0055000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................2315.0055000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTT.................................................................................................................2115.0055000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................2415.0055000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................1815.0053011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.....................................................................................................................................................2414.0042011
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.....................................................................................................................................................2414.0043010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCGC...............................................................................................................................................................2214.0044000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................2114.0043001
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2413.0033000
...................................................................................................................................................................................................................................GGGTCACTCTGTGCCTGTGC................................................................................................................2013.0033000
............................................................................................................................................................................................................................ATTTTGGGGGTCACTCTGTGCCTGTGC................................................................................................................2713.0031020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCA..................................................................................................................................................................1913.0032010
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................2113.0031002
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2412.0022000
droYak3
A-T------------------------------------------------------------------------------------------AAATCA----------------GTGAAAA-G-----------------T--TTTAAAGTCCACT-------------CGG-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTAGGACATAA-TCCACA-A-AT-AA-AGTGA--------------------------------T--------------------------T-------TACSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21116357.00163577408256506419301221913210021
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2219791.00979165358611922963127235260040
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2013549.0035496824092152789013430010
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC................................................................................................................2211364.001364418710661050200000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2311292.001292192633311102133180020
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................201857.008570856100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................191742.00742507119605193100010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................221676.00676722223363121200001
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................211614.006140612101000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................231220.0022071079760210000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................231184.0018466169930000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................241156.0015617804781200010
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................231144.0014453210430000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.................................................................................................................211139.0013908243112010000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221119.0011910683421220000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCC..................................................................................................................................................................19192.00927202000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21189.008956171231000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................22167.0067067000000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................20161.00610431130400000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................23152.00529122730100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21150.00502308130600000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................25150.00507311010100000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................19148.00480280191000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................19136.0036034200000000
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC................................................................................................................21136.00362231100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23135.00352221100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................18127.0027115900200000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................21123.0023022100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................21122.0022152230000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................24121.0021141420000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG................................................................................................................22119.0019100180000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22119.0019412110100000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT...............................................................................................................23117.0017211130000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCG..................................................................................................................................................................19113.0013130000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................24113.001313810000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22112.001208210010000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................21110.001031301200000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCC...............................................................................................................2319.00900720000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.....................................................................................................................................................2419.00912600000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................2419.00902600100000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................2118.00808000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................2418.00811600000000
................................................................................................................................................TTTAAAGTCCACT-------------CGG-TGGC.....................................................................................................................................................................................2018.00800710000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................2018.00810500200000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2117.00715010000000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................1817.00715100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................2417.00721400000000
................................................................................................................................................................................................ACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGT................................................................................................................................2917.00700000000007
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT................................................................................................................2217.00704120000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................2217.00707000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................1817.00716000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................2216.00606000000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................1816.00614010000000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................1916.00606000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................2315.00505000000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCT....................................................................................................................1815.00532000000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2315.00503020000000
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG.................................................................................................................2015.00505000000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2415.00505000000000
..................................................................................................................................................................................TCAGGTACTTAGTGAC.....................................................................................................................................................................1615.00500000000050
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.....................................................................................................................................................2414.00403100000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................2414.00404000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.....................................................................................................................................................2414.00402200000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA................................................................................................................2214.00401300000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCTT...............................................................................................................................................................2214.00413000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................2014.00402100100000
......................................................................................................................................................................................GTACTTAGTGACTCTCAA...............................................................................................................................................................1813.00303000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------T.....................................................................................................................................................2413.00301200000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA...............................................................................................................2313.00303000000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG...................................................................................................................1913.00300300000000
.................................................................................................................................................TTAAAGTCCACT-------------CGG-TGGC.....................................................................................................................................................................................1913.00300300000000
...........................................................................................................................G-----------------T--TTTAAAGTCCACT-------------CGG-TGGC.....................................................................................................................................................................................2213.00300210000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTTG................................................................................................................................................................2112.00201000100000
....................................................................................................................................................................................................................................GGTCACTCTGTGCCTGTGC................................................................................................................1912.00202000000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------......................................................................................................................................................2312.00200200000000
................................................................................................................................................................................GCTCAGGTACTTAGTGACTCTCA................................................................................................................................................................2312.00202000000000
droEre2
T-GTGTA-------------------------------------------------------------------------------------CAAGTCA----------------GTGAATA-G-----------------T--TTAAGTGTCCACT-------------CGG-TGGCTCAGGTACTTAGTGACTCTCAAT--------GCTT-TTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGC-----CAGTGGGACGCAA-TCAACA-AAAT-AA-AGTGA--------------------------------TAAG--TACAAGTG-------A----AT-------TGCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................22155099.00550995214644332546419715204
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCA................................................................................................................................................................21151360.00513604785855216699521815647
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAA...............................................................................................................................................................2114679.0046794675100120
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCA................................................................................................................................................................2014162.0041624158010030
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................2313789.0037893462362641241973
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTC.................................................................................................................................................................2012705.0027052124888041603120
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC...............................................................................................................................................................2211216.0012161116346247290
..................................................................................................................................................................................TCAGGTACTTAGTGACTCT..................................................................................................................................................................191493.0049340952228470
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................241469.004694336241167
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC................................................................................................................221423.00423199952302887
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................231392.003923626213108
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT...............................................................................................................................................................221374.00374360313340
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................221343.00343343000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................231265.0026519931179180
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAA...............................................................................................................................................................201229.00229215054050
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCG................................................................................................................................................................211193.00193189002110
....................................................................................................................................................................................AGGTACTTAGTGACTCTCA................................................................................................................................................................191188.00188176117030
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................231170.001701501003151
...................................................................................................................................................................................CAGGTACTTAGTGACTCTC.................................................................................................................................................................191167.00167167000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.................................................................................................................211144.001441234052100
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAC...............................................................................................................................................................211109.00109109000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................231104.0010493713000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................25195.009590012020
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................23193.009389021010
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA................................................................................................................................................................22174.0074610020110
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA...............................................................................................................................................................23158.005854010030
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.....................................................................................................................................................24157.005754000210
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCT................................................................................................................................................................21155.0055350512120
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG...............................................................................................................................................................22144.004444000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------......................................................................................................................................................22138.003838000000
.................................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.................................................................................................................................................................21136.003660510240
...................................................................................................................................................................................CAGGTACTTAGTGACTCT..................................................................................................................................................................18134.003434000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.....................................................................................................................................................24133.003329301000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAT...............................................................................................................................................................21133.003333000000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCA................................................................................................................................................................18128.002828000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.....................................................................................................................................................23127.002727000000
.....................................................................................................................................................................................GGTACTTAGTGACTCTCAA...............................................................................................................................................................19124.002424000000
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC................................................................................................................21120.002020000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.....................................................................................................................................................24118.001818000000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------......................................................................................................................................................22117.001717000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCC................................................................................................................................................................21117.00171059011
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAG...............................................................................................................................................................21116.001616000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------......................................................................................................................................................21115.001513002000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.....................................................................................................................................................24114.001413100000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.....................................................................................................................................................24114.001414000000
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG.................................................................................................................20113.001313000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTC.................................................................................................................................................................18113.001311010100
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.....................................................................................................................................................24112.001210200000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------......................................................................................................................................................22111.001111000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA...............................................................................................................2318.0088000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTC...................................................................................................................................................................1817.0074100020
..................................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGCT...............................................................................................................2217.0076100000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------......................................................................................................................................................2217.0077000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTA.................................................................................................................................................................2016.0063000030
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTT.................................................................................................................................................................2016.0065000010
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA....................................................................................................................................................2416.0066000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT................................................................................................................2216.0066000000
....................................................................................................................................................................................AGGTACTTAGTGACTCTCAC...............................................................................................................................................................2016.0066000000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.....................................................................................................................................................2416.0064110000
..................................................................................................................................................................................TCAGGTACTTAGTGACTCTCGC...............................................................................................................................................................2215.0055000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG...................................................................................................................1914.0044000000
.................................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT...............................................................................................................2314.0041102000
...................................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------......................................................................................................................................................2214.0044000000

Generated: 10/20/2015 at 07:50 PM