ID:

dwi-mir-275

Coordinate:

scf2_1100000004585:5257600-5257692 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.1 -37.1 -36.8

Flybase annnotation

pre_miRNA [Dwil\mir-275-RM]; miRNA [Dwil\miR-275-RA]

No Repeatable elements found

Sense Strand Reads

TGAAACTCTGAAACCCTGGGATGACGAACAAGGTCGTTTCCTTTCGCCTTGTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATTCAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTTTTAGACCAAGATTCATCGCACGACGACGGCGACAACGACGACACAACAAAAAAACCAT

************************************************..((((...(((.(((((((((.((((..(((..(((((.................))))).)))..))))..))))))))).)))...))))....************************************************
Read size # Mismatch Hit Count Total Norm Total M045

female body

V118

embryo

V119

head

V117

male body
M020

head

...........................................................................................................TCAGGTACCTGAAGTAGCGCGCG............................................................... 23 0 1 65492.00 65492 45745 8737 7772 2671 567
...........................................................................................................TCAGGTACCTGAAGTAGCGCG................................................................. 21 0 1 63267.00 63267 15748 43233 1420 2804 62
...........................................................................................................TCAGGTACCTGAAGTAGCGCGC................................................................ 22 0 1 50140.00 50140 18942 25958 2508 1861 871
...........................................................................................................TCAGGTACCTGAAGTAGCGC.................................................................. 20 0 1 5450.00 5450 1688 2798 332 615 17
...............................................................CGCGCTAATCAGTGACCAGGGCT........................................................................................................... 23 0 1 4820.00 4820 1011 238 522 193 2856
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGT.............................................................. 24 0 1 4288.00 4288 3150 537 448 102 51
............................................................................................................CAGGTACCTGAAGTAGCGCGCG............................................................... 22 0 1 2683.00 2683 2652 9 18 2 2
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGA.............................................................. 24 1 1 2258.00 2258 1335 801 79 28 15
...........................................................................................................TCAGGTACCTGAAGTAGCGCGA................................................................ 22 1 1 2248.00 2248 709 1492 29 18 0
...............................................................CGCGCTAATCAGTGACCAGGGC............................................................................................................ 22 0 1 1448.00 1448 145 150 419 33 701
............................................................................................................CAGGTACCTGAAGTAGCGCGC................................................................ 21 0 1 1210.00 1210 1186 16 3 5 0
............................................................................................................CAGGTACCTGAAGTAGCGCG................................................................. 20 0 1 915.00 915 884 28 0 3 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGT................................................................ 22 1 1 911.00 911 330 467 37 77 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCA............................................................... 23 1 1 618.00 618 106 458 44 10 0
...........................................................................................................TCAGGTACCTGAAGTAGCG................................................................... 19 0 1 563.00 563 314 193 17 39 0
...........................................................................................................TCAGGTACCTGAAGTGGCGCGCG............................................................... 23 1 1 543.00 543 187 8 234 88 26
.............................................................................................................AGGTACCTGAAGTAGCGCG................................................................. 19 0 1 387.00 387 43 321 8 15 0
...............................................................CGCGCTAATCAGTGACCAGGGCC........................................................................................................... 23 1 1 341.00 341 0 0 1 0 340
.............................................................................................................AGGTACCTGAAGTAGCGCGC................................................................ 20 0 1 283.00 283 61 189 15 18 0
.............................................................................................................AGGTACCTGAAGTAGCGCGCG............................................................... 21 0 1 266.00 266 137 58 49 20 2
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCC............................................................... 23 1 1 265.00 265 155 39 26 21 24
...........................................................................................................TCAGGTACCTGAAGTGGCGCGC................................................................ 22 1 1 256.00 256 102 16 90 44 4
...........................................................................................................TCAGGTACCTGGAGTAGCGCGCG............................................................... 23 1 1 236.00 236 222 4 7 3 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGC.............................................................. 24 1 1 236.00 236 189 17 12 8 10
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCT............................................................... 23 1 1 194.00 194 105 75 9 5 0
...............................................................CGCGCTAATCAGTGACCAGGG............................................................................................................. 21 0 1 157.00 157 77 30 39 6 5
...........................................................................................................TCAGGTACCTGAAGTGGCGCG................................................................. 21 1 1 149.00 149 31 26 69 23 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCAA.............................................................. 24 2 1 140.00 140 69 70 1 0 0
............................................................................................................CAGGTACCTGAAGTAGCGC.................................................................. 19 0 1 139.00 139 133 4 1 1 0
............................................................................................................CAGGTACCTGAAGTAGCGCGCGT.............................................................. 23 0 1 138.00 138 137 0 1 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT............................................................. 25 1 1 132.00 132 93 11 21 7 0
...........................................................................................................TCAGGTACCTGAAGCAGCGCGC................................................................ 22 1 1 131.00 131 15 105 8 3 0
...........................................................................................................TCAGGTACCTGAAGTATCGCG................................................................. 21 1 1 131.00 131 8 120 0 3 0
...........................................................................................................TCAGGTACCTGGAGTAGCGCGC................................................................ 22 1 1 128.00 128 108 19 1 0 0
...........................................................................................................TCAGGCACCTGAAGTAGCGCG................................................................. 21 1 1 126.00 126 11 107 3 5 0
...........................................................................................................TCAGGTACCTGAAGCAGCGCG................................................................. 21 1 1 124.00 124 5 112 5 2 0
...........................................................................................................TCAGGTACCTGGAGTAGCGCG................................................................. 21 1 1 108.00 108 68 37 0 3 0
...........................................................................................................TCAGGTACCTGAAGTAGCTCG................................................................. 21 1 1 103.00 103 3 96 0 4 0
...........................................................................................................TCAGTTACCTGAAGTAGCGCGCG............................................................... 23 1 1 100.00 100 67 16 12 4 1
...........................................................................................................TCATGTACCTGAAGTAGCGCG................................................................. 21 1 1 100.00 100 9 90 1 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGAG................................................................. 21 1 1 99.00 99 3 87 8 1 0
...........................................................................................................TCAGGTACCTGAAGTATCGCGC................................................................ 22 1 1 98.00 98 17 72 4 3 2
...........................................................................................................TCAGGTACCTGAAGTAGCGCA................................................................. 21 1 1 97.00 97 15 67 5 10 0
...........................................................................................................TCAGTTACCTGAAGTAGCGCG................................................................. 21 1 1 95.00 95 27 59 0 7 2
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA............................................................ 26 3 1 94.00 94 74 20 0 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCT................................................................. 21 1 1 92.00 92 4 87 0 1 0
...........................................................................................................CCAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 92.00 92 12 70 7 3 0
...........................................................................................................TCAGGTACCTGAAGTAGC.................................................................... 18 0 1 92.00 92 30 50 10 2 0
...........................................................................................................TCAGGCACCTGAAGTAGCGCGCG............................................................... 23 1 1 91.00 91 28 34 20 7 2
..........................................................................................................CTCAGGTACCTGAAGTAGCGCGCG............................................................... 24 1 1 90.00 90 75 5 8 2 0
...........................................................................................................TCAGGTACCTGAAGTAGCTCGC................................................................ 22 1 1 90.00 90 11 74 3 2 0
...........................................................................................................TCAGGCACCTGAAGTAGCGCGC................................................................ 22 1 1 86.00 86 16 60 6 3 1
...........................................................................................................TCAGGTACCTGAAGTAGCGCGAG............................................................... 23 1 1 86.00 86 1 22 60 3 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA............................................................. 25 2 1 86.00 86 39 44 3 0 0
...........................................................................................................TAAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 84.00 84 0 76 8 0 0
................................................................GCGCTAATCAGTGACCAGGGCT........................................................................................................... 22 0 1 82.00 82 72 2 3 3 2
...........................................................................................................TCAGGTACCTGAAGAAGCGCG................................................................. 21 1 1 81.00 81 8 68 5 0 0
...........................................................................................................TCAGGTACCTGAAGCAGCGCGCG............................................................... 23 1 1 79.00 79 32 21 21 5 0
...........................................................................................................TCAGTTACCTGAAGTAGCGCGC................................................................ 22 1 1 79.00 79 28 41 4 2 4
...........................................................................................................TCAGGTACATGAAGTAGCGCG................................................................. 21 1 1 76.00 76 1 65 7 3 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCTC................................................................ 22 1 1 76.00 76 6 60 5 3 2
...........................................................................................................TCAGGTACCTGAAGTAGCACG................................................................. 21 1 1 74.00 74 5 57 10 2 0
...........................................................................................................TCAGGTACCTGAGGTAGCGCG................................................................. 21 1 1 73.00 73 10 52 7 4 0
...........................................................................................................TCATGTACCTGAAGTAGCGCGC................................................................ 22 1 1 72.00 72 12 50 3 0 7
...........................................................................................................TCAGGTACCTTAAGTAGCGCG................................................................. 21 1 1 72.00 72 4 66 2 0 0
............................................................................................................CAGGTACCTGAAGTAGCGCGCGA.............................................................. 23 1 1 71.00 71 71 0 0 0 0
...........................................................................................................TCATGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 68.00 68 27 19 10 2 10
...........................................................................................................TCGGGTACCTGAAGTAGCGCG................................................................. 21 1 1 68.00 68 17 43 2 6 0
...........................................................................................................TCAGGTACCTGAAGAAGCGCGC................................................................ 22 1 1 67.00 67 6 42 15 2 2
...........................................................................................................TCAGGTACCTGAAGTAGAGCGCG............................................................... 23 1 1 67.00 67 11 25 30 1 0
...........................................................................................................CCAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 67.00 67 21 12 30 4 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCC................................................................. 21 1 1 66.00 66 4 57 1 3 1
...........................................................................................................TCAGGTACCTGAAGTACCGCGC................................................................ 22 1 1 65.00 65 9 41 7 7 1
...........................................................................................................TCAGGTACCTGAAGTAGCGCCC................................................................ 22 1 1 65.00 65 15 39 6 5 0
...........................................................................................................TCAGGTACCCGAAGTAGCGCG................................................................. 21 1 1 65.00 65 14 43 3 4 1
...........................................................................................................TCAGGTACCTGCAGTAGCGCGCG............................................................... 23 1 1 64.00 64 44 8 9 2 1
...........................................................................................................TCAGGTACCTGAAGTAGCTCGCG............................................................... 23 1 1 63.00 63 20 27 13 2 1
...........................................................................................................TCAGGTACCTGAAGAAGCGCGCG............................................................... 23 1 1 63.00 63 23 10 30 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCACG............................................................... 23 1 1 61.00 61 10 20 30 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCACGC................................................................ 22 1 1 61.00 61 7 39 14 1 0
...............................................................CGCGCTAATCAGTGACCAGGGCG........................................................................................................... 23 1 1 61.00 61 0 0 1 0 60
...........................................................................................................TCAGGTACCTGAAGTAGCGAGCG............................................................... 23 1 1 60.00 60 3 23 34 0 0
...........................................................................................................TCAGGTACCTGAAGTATCGCGCG............................................................... 23 1 1 60.00 60 23 23 12 2 0
...........................................................................................................CCAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 60.00 60 17 29 8 5 1
...........................................................................................................TCAGGTACCTGAAGTAGCGCTCG............................................................... 23 1 1 60.00 60 22 20 13 2 3
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCCA.............................................................. 24 2 1 58.00 58 20 27 9 1 1
...........................................................................................................TCAGGTACATGAAGTAGCGCGC................................................................ 22 1 1 58.00 58 0 44 13 0 1
...........................................................................................................TCAGGTACCTGAAGTAGAGCGC................................................................ 22 1 1 57.00 57 3 41 12 1 0
...........................................................................................................TCAGGTACCTGAAGGAGCGCGC................................................................ 22 1 1 57.00 57 11 41 3 1 1
...........................................................................................................TCAGGTACCTGAAGTAGAGCG................................................................. 21 1 1 56.00 56 1 44 10 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCCCG................................................................. 21 1 1 56.00 56 7 41 5 3 0
...........................................................................................................TCAGGTACCTGAAGTAGCGTG................................................................. 21 1 1 55.00 55 3 48 3 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCACGCG............................................................... 23 1 1 55.00 55 16 12 24 3 0
...........................................................................................................TCAGGTACCTGAAGTGGCGC.................................................................. 20 1 1 55.00 55 19 2 21 13 0
...........................................................................................................TCAGGTACCCGAAGTAGCGCGC................................................................ 22 1 1 54.00 54 7 35 8 1 3
..........................................................................................................CTCAGGTACCTGAAGTAGCGCG................................................................. 22 1 1 54.00 54 18 32 0 4 0
...............................................................CGCGCTAATCAGTGACCAGGGCTT.......................................................................................................... 24 1 1 53.00 53 23 5 0 5 20
...........................................................................................................TCAGGTACCCGAAGTAGCGCGCG............................................................... 23 1 1 52.00 52 28 8 12 4 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCAC................................................................ 22 1 1 52.00 52 2 40 7 1 2
..........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG............................................................... 24 0 1 51.00 51 49 0 0 1 1
...........................................................................................................TCAGGTACCTGAAGTAGTGCG................................................................. 21 1 1 50.00 50 2 46 1 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGAGC................................................................ 22 1 1 50.00 50 1 37 11 1 0
..........................................................................................................CTCAGGTACCTGAAGTAGCGCGC................................................................ 23 1 1 49.00 49 30 16 3 0 0
...........................................................................................................TCAGGTACCTGCAGTAGCGCG................................................................. 21 1 1 48.00 48 18 28 1 1 0
...........................................................................................................TCAGGTACCTGAAGTAGTGCGCG............................................................... 23 1 1 47.00 47 21 7 17 1 1
...........................................................................................................TCAGGTACCTGAATTAGCGCGCG............................................................... 23 1 1 47.00 47 26 7 5 3 6
............................................................................................................TCAGTACCTGAAGTAGCGCGCG............................................................... 22 3 1 47.00 47 27 8 7 4 1
...........................................................................................................TAAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 46.00 46 2 38 4 2 0
...............................................................CGCGCTAATCAGTGACCAGGGCTC.......................................................................................................... 24 1 1 46.00 46 4 1 1 0 40
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGG.............................................................. 24 1 1 45.00 45 35 2 0 0 8
...........................................................................................................TCAGGGACCTGAAGTAGCGCGCG............................................................... 23 1 1 44.00 44 15 9 15 1 4
...........................................................................................................TCAGGTACATGAAGTAGCGCGCG............................................................... 23 1 1 44.00 44 2 9 33 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCCCG............................................................... 23 1 1 43.00 43 9 13 7 13 1
...........................................................................................................TCAGGGACCTGAAGTAGCGCG................................................................. 21 1 1 42.00 42 6 29 2 5 0
...........................................................................................................TCAGCTACCTGAAGTAGCGCG................................................................. 21 1 1 42.00 42 10 28 1 3 0
...........................................................................................................TCAGGTACCTGAGGTAGCGCGC................................................................ 22 1 1 41.00 41 7 29 4 0 1
...........................................................................................................TCGGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 41.00 41 26 6 8 1 0
...........................................................................................................TCAGGTAACTGAAGTAGCGCGCG............................................................... 23 1 1 41.00 41 1 1 39 0 0
...........................................................................................................TCAGGTACCTGAACTAGCGCG................................................................. 21 1 1 41.00 41 15 23 2 1 0
...........................................................................................................TCAGGAACCTGAAGTAGCGCG................................................................. 21 1 1 40.00 40 4 32 3 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGTG............................................................... 23 1 1 40.00 40 5 20 13 2 0
...........................................................................................................TAAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 40.00 40 5 14 21 0 0
...........................................................................................................TCAGGTACCTGAGGTAGCGCGCG............................................................... 23 1 1 40.00 40 23 10 3 2 2
...........................................................................................................TCAGGTACCTGAAGTAGCCCGC................................................................ 22 1 1 40.00 40 3 27 7 3 0
..............................................................................................................GGTACCTGAAGTAGCGCGCG............................................................... 20 0 1 39.00 39 25 6 5 3 0
...........................................................................................................TCAGGTACCTTAAGTAGCGCGC................................................................ 22 1 1 38.00 38 3 33 2 0 0
...........................................................................................................TCAGGTACCTGAATTAGCGCGC................................................................ 22 1 1 38.00 38 8 23 2 1 4
...........................................................................................................TCAGGTACCTGAAGTCGCGCGCG............................................................... 23 1 1 38.00 38 10 10 14 4 0
...........................................................................................................TCAGGTGCCTGAAGTAGCGCGCG............................................................... 23 1 1 38.00 38 22 7 7 1 1
...........................................................................................................TCAGCTACCTGAAGTAGCGCGC................................................................ 22 1 1 37.00 37 19 14 3 1 0
............................................................................................................TCAGTACCTGAAGTAGCGCG................................................................. 20 3 1 37.00 37 8 24 2 2 1
...........................................................................................................TCGGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 37.00 37 11 21 1 4 0
...........................................................................................................TCAGGTACCTGACGTAGCGCG................................................................. 21 1 1 37.00 37 0 32 1 4 0
...........................................................................................................TCAGCTACCTGAAGTAGCGCGCG............................................................... 23 1 1 37.00 37 23 8 6 0 0
............................................................................................................TCAGTACCTGAAGTAGCGCGC................................................................ 21 3 1 37.00 37 11 20 1 1 4
...........................................................................................................TCAGGTACCTGAAGTACCGCG................................................................. 21 1 1 36.00 36 2 31 1 2 0
...........................................................................................................TCAGGTACCTGACGTAGCGCGCG............................................................... 23 1 1 36.00 36 4 15 11 6 0
...............................................................CGCGCTAATCAGTGACCAGG.............................................................................................................. 20 0 1 35.00 35 27 4 2 0 2
...........................................................................................................TCACGTACCTGAAGTAGCGCG................................................................. 21 1 1 34.00 34 4 28 0 2 0
...........................................................................................................TCAGGTACCTGAATTAGCGCG................................................................. 21 1 1 34.00 34 8 24 1 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA............................................................. 25 1 1 34.00 34 14 11 8 1 0
............................................................................................................CAGGTACCTGAAGTAGCGCGA................................................................ 21 1 1 33.00 33 33 0 0 0 0
...........................................................................................................TCAGGTACCTCAAGTAGCGCG................................................................. 21 1 1 33.00 33 4 26 1 2 0
...........................................................................................................TCACGTACCTGAAGTAGCGCGC................................................................ 22 1 1 33.00 33 8 17 3 1 4
...........................................................................................................TCAGGTACCTGAAGTAACGCGCG............................................................... 23 1 1 33.00 33 9 5 17 2 0
..........................................................................................................TTCAGGTACCTGAAGTAGCGCGCG............................................................... 24 1 1 32.00 32 32 0 0 0 0
...........................................................................................................TCAGGTACCTGCAGTAGCGCGC................................................................ 22 1 1 32.00 32 15 16 1 0 0
...........................................................................................................TCAGGTACCTGAAGGAGCGCG................................................................. 21 1 1 32.00 32 5 25 2 0 0
...........................................................................................................TCAGGTACCTGAACTAGCGCGCG............................................................... 23 1 1 32.00 32 14 7 7 1 3
...........................................................................................................TCAGGTACCTGAAGTCGCGCG................................................................. 21 1 1 31.00 31 1 26 2 2 0
...........................................................................................................TCAGGTACCTGAAGTACCGCGCG............................................................... 23 1 1 31.00 31 5 17 9 0 0
...........................................................................................................TCAGGTACCTGAAGTGGCGCGCGT.............................................................. 24 1 1 31.00 31 17 0 12 2 0
...........................................................................................................TTAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 31.00 31 0 27 3 1 0
...........................................................................................................TCAGGTACCTGTAGTAGCGCGCG............................................................... 23 1 1 30.00 30 28 0 2 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCTA.............................................................. 24 2 1 30.00 30 5 25 0 0 0
..........................................................................................................ATCAGGTACCTGAAGTAGCGCGCG............................................................... 24 1 1 30.00 30 30 0 0 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGTGC................................................................ 22 1 1 29.00 29 3 20 4 2 0
...........................................................................................................TCAGGTACCTTAAGTAGCGCGCG............................................................... 23 1 1 28.00 28 11 12 4 1 0
.............................................................................................................AGGTACCTGAAGTAGCGC.................................................................. 18 0 1 28.00 28 4 19 3 2 0
...........................................................................................................TCAGGTACCTGAAGTAGTGCGC................................................................ 22 1 1 28.00 28 4 19 3 1 1
...........................................................................................................TCAGATACCTGAAGTAGCGCG................................................................. 21 1 1 27.00 27 1 24 1 1 0
...........................................................................................................TCAGGTACCTGAAGTAACGCG................................................................. 21 1 1 27.00 27 3 16 3 5 0
...........................................................................................................TCAGGTACCTGAAGTAACGCGC................................................................ 22 1 1 27.00 27 2 17 7 1 0
...........................................................................................................TCAGGTACCTGAAATAGCGCGCG............................................................... 23 1 1 27.00 27 8 2 17 0 0
...........................................................................................................TCAGGTGCCTGAAGTAGCGCGC................................................................ 22 1 1 27.00 27 5 19 1 2 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA............................................................ 26 2 1 26.00 26 12 13 1 0 0
...........................................................................................................TCAGGGACCTGAAGTAGCGCGC................................................................ 22 1 1 26.00 26 5 13 2 1 5
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT............................................................ 26 2 1 26.00 26 23 1 2 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGTGCG............................................................... 23 1 1 26.00 26 9 11 6 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCCCGCG............................................................... 23 1 1 26.00 26 5 8 10 3 0
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................... 23 1 1 26.00 26 22 1 1 1 1
...........................................................................................................TCAGATACCTGAAGTAGCGCGCG............................................................... 23 1 1 25.00 25 11 4 10 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGAAA.............................................................. 24 3 1 25.00 25 12 13 0 0 0
...........................................................................................................TCAGGTAACTGAAGTAGCGCGC................................................................ 22 1 1 25.00 25 0 9 15 1 0
...........................................................................................................TCCGGTACCTGAAGTAGCGCG................................................................. 21 1 1 25.00 25 0 25 0 0 0
...........................................................................................................ACAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 25.00 25 13 3 8 1 0
...........................................................................................................TCAGGTGCCTGAAGTAGCGCG................................................................. 21 1 1 25.00 25 5 16 3 1 0
...........................................................................................................ACAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 25.00 25 6 15 3 1 0
...........................................................................................................TCAGGAACCTGAAGTAGCGCGCG............................................................... 23 1 1 24.00 24 9 3 12 0 0
...........................................................................................................TCAAGTACCTGAAGTAGCGCG................................................................. 21 1 1 24.00 24 1 18 3 2 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGAA............................................................... 23 2 1 24.00 24 5 19 0 0 0
...............................................................................................................GTACCTGAAGTAGCGCGCG............................................................... 19 0 1 24.00 24 22 1 1 0 0
...........................................................................................................TCAGGTACCTGAAATAGCGCG................................................................. 21 1 1 24.00 24 2 22 0 0 0
..............................................................................................................GGTACCTGAAGTAGCGCGC................................................................ 19 0 1 24.00 24 14 4 3 3 0
...........................................................................................................GCAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 23.00 23 10 2 11 0 0
...........................................................................................................ACAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 22.00 22 4 9 8 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGG................................................................ 22 1 1 22.00 22 8 11 0 2 1
...........................................................................................................TCACGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 22.00 22 9 7 3 1 2
...........................................................................................................TCAGATACCTGAAGTAGCGCGC................................................................ 22 1 1 22.00 22 5 14 3 0 0
...........................................................................................................TCAGGTACCTAAAGTAGCGCG................................................................. 21 1 1 22.00 22 5 15 2 0 0
...........................................................................................................TCAGGTCCCTGAAGTAGCGCG................................................................. 21 1 1 21.00 21 0 20 0 1 0
...........................................................................................................TCAGGTACCTCAAGTAGCGCGCG............................................................... 23 1 1 21.00 21 9 7 4 1 0
...........................................................................................................TCAGGTATCTGAAGTAGCGCGCG............................................................... 23 1 1 21.00 21 12 1 8 0 0
...........................................................................................................TCAAGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 21.00 21 4 2 12 1 2
...........................................................................................................TCAGGTATCTGAAGTAGCGCG................................................................. 21 1 1 21.00 21 5 15 1 0 0
...........................................................................................................TTAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 21.00 21 6 6 7 2 0
...........................................................................................................TCAGGTACCTGAAGTAGCGA.................................................................. 20 1 1 20.00 20 7 7 6 0 0
..........................................................................................................TTCAGGTACCTGAAGTAGCGCGC................................................................ 23 1 1 20.00 20 19 0 0 0 1
...........................................................................................................TCAGGTACCTCAAGTAGCGCGC................................................................ 22 1 1 20.00 20 2 13 2 1 2
...............................................................CGCGCTAATCAGTGACCAGGAC............................................................................................................ 22 1 1 20.00 20 0 0 3 0 17
...........................................................................................................TCAGGTACTTGAAGTAGCGCG................................................................. 21 1 1 20.00 20 3 16 1 0 0
...........................................................................................................TCCGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 19.00 19 1 15 3 0 0
................................................................................................................TACCTGAAGTAGCGCGCG............................................................... 18 0 1 19.00 19 15 2 2 0 0
...........................................................................................................TCAGGTACCTGAAGGAGCGCGCG............................................................... 23 1 1 19.00 19 15 1 2 1 0
...........................................................................................................TCAGGTACCTAAAGTAGCGCGCG............................................................... 23 1 1 19.00 19 5 2 11 1 0
...........................................................................................................TCAGGTACCTGAACTAGCGCGC................................................................ 22 1 1 18.00 18 7 10 1 0 0
............................................................................................................CAGGTACCTGAGGTAGCGCGCG............................................................... 22 1 1 18.00 18 18 0 0 0 0
...........................................................................................................TCAGGTACCTAAAGTAGCGCGC................................................................ 22 1 1 18.00 18 3 9 4 1 1
...........................................................................................................TTAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 18.00 18 4 10 3 0 1
...........................................................................................................TCAGGTACCTGAAATAGCGCGC................................................................ 22 1 1 18.00 18 8 7 3 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCCGC................................................................. 21 3 1 18.00 18 9 4 1 4 0
.............................................................................................................AGGTACCTGAAGTAGCGCGCGT.............................................................. 22 0 1 18.00 18 7 3 4 4 0
...............................................................................................................GTACCTGAAGTAGCGCGC................................................................ 18 0 1 17.00 17 11 3 1 2 0
...........................................................................................................TCAAGTACCTGAAGTAGCGCGC................................................................ 22 1 1 17.00 17 1 8 5 3 0
............................................................................................................CAGGTACCTGAAGTAGCGCGT................................................................ 21 1 1 17.00 17 17 0 0 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCCG................................................................ 22 2 1 16.00 16 13 1 2 0 0
...........................................................................................................TCAGGTACCTGAAGTGGCGCGCGA.............................................................. 24 2 1 16.00 16 9 3 2 2 0
...........................................................................................................TCAGGTACCTGACGTAGCGCGC................................................................ 22 1 1 16.00 16 0 11 3 2 0
............................................................................................................CAGGTACCTGAAGTAGCGCGCC............................................................... 22 1 1 16.00 16 15 0 0 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA............................................................. 25 3 1 16.00 16 6 10 0 0 0
...........................................................................................................TCAGGTATCTGAAGTAGCGCGC................................................................ 22 1 1 16.00 16 3 8 2 3 0
.............................................................................................................AGGTACCTGAAGTAGCGCGA................................................................ 20 1 1 16.00 16 4 11 0 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCCT.............................................................. 24 1 1 16.00 16 13 1 1 0 1
...........................................................................................................GCAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 16.00 16 6 6 4 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA........................................................... 27 3 1 15.00 15 11 4 0 0 0
...........................................................................................................TCAGGTACCTGAAGTCGCGCGC................................................................ 22 1 1 15.00 15 1 14 0 0 0
...........................................................................................................TCAGGTACCTGAAGCAGCGC.................................................................. 20 1 1 15.00 15 1 12 0 2 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCTT.............................................................. 24 1 1 15.00 15 4 5 3 3 0
...........................................................................................................TCAGGTACCTGGAGTAGCGCGCGA.............................................................. 24 2 1 15.00 15 15 0 0 0 0
............................................................................................................CAGGTACCTGAAGTAGCGCGCT............................................................... 22 1 1 15.00 15 15 0 0 0 0
..............................................................................................................GGTACCTGAAGTAGCGCG................................................................. 18 0 1 15.00 15 11 3 0 1 0
...........................................................................................................TCAGGTACCTGGAGTAGCGCGA................................................................ 22 2 1 14.00 14 12 2 0 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGTT............................................................... 23 2 1 14.00 14 5 6 0 3 0
...........................................................................................................TCAGGTACCTGTAGTAGCGCG................................................................. 21 1 1 14.00 14 9 4 0 1 0
...........................................................................................................TCAGGTACTTGAAGTAGCGCGC................................................................ 22 1 1 14.00 14 1 11 1 1 0
..........................................................................................................TTCAGGTACCTGAAGTAGCGCG................................................................. 22 1 1 14.00 14 14 0 0 0 0
...........................................................................................................TCCGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 14.00 14 3 5 6 0 0
............................................................................................................CAGGTACCTGAAGTAGCG................................................................... 18 0 1 14.00 14 14 0 0 0 0
...........................................................................................................TCAGGAACCTGAAGTAGCGCGC................................................................ 22 1 1 13.00 13 5 7 0 1 0
...........................................................................................................TCAGGCACCTGAAGTAGCGCGA................................................................ 22 2 1 13.00 13 1 12 0 0 0
...........................................................................................................TCAGGTACTTGAAGTAGCGCGCG............................................................... 23 1 1 13.00 13 5 5 2 1 0
................................................................GCGCTAATCAGTGACCAGGGC............................................................................................................ 21 0 1 13.00 13 5 1 5 0 2
..........................................................................................................ATCAGGTACCTGAAGTAGCGCGC................................................................ 23 1 1 13.00 13 13 0 0 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCCG.................................................................. 20 2 1 13.00 13 9 4 0 0 0
...........................................................................................................TCAGGTACCTGAAGCAGCGCGA................................................................ 22 2 1 13.00 13 1 12 0 0 0
............................................................................................................CAGGTACCTGAAGTAGCGCGCA............................................................... 22 1 1 13.00 13 12 1 0 0 0
...........................................................................................................TCAGGTAACTGAAGTAGCGCG................................................................. 21 1 1 12.00 12 0 10 2 0 0
..........................................................................................................ATCAGGTACCTGAAGTAGCGCG................................................................. 22 1 1 12.00 12 11 1 0 0 0
..............................................................................................................TCTACCTGAAGTAGCGCGCG............................................................... 20 2 1 12.00 12 10 2 0 0 0
...........................................................................................................TCAGGTCCCTGAAGTAGCGCGC................................................................ 22 1 1 12.00 12 1 10 0 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT............................................................. 25 2 1 12.00 12 5 6 0 0 1
...........................................................................................................TCAGGTACCTGAAGTAGCGCAA................................................................ 22 2 1 12.00 12 3 9 0 0 0
...............................................................CGCGCTAATCAGTGACCAGGGCTTT......................................................................................................... 25 2 1 11.00 11 10 0 1 0 0
...............................................................CGCGCTAATCATTGACCAGGGCT........................................................................................................... 23 1 1 11.00 11 0 0 0 0 11
...............................................................CTCGCTAATCAGTGACCAGGGCT........................................................................................................... 23 1 1 11.00 11 1 0 3 0 7
...........................................................................................................TCAGGTACCTGAAGTAGGGCGCG............................................................... 23 1 1 11.00 11 4 1 5 0 1
...........................................................................................................GCAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 11.00 11 4 3 4 0 0
..........................................................................................................GTCAGGTACCTGAAGTAGCGCG................................................................. 22 0 1 11.00 11 11 0 0 0 0
...............................................................CGCGCTAATCAGTGACCAGGGCTGA......................................................................................................... 25 0 1 11.00 11 2 1 0 8 0
................................................................CGCCTAATCAGTGACCAGGGCT........................................................................................................... 22 3 1 10.00 10 1 0 0 1 8
...........................................................................................................TCAGTTACCTGAAGTAGCGCGCGT.............................................................. 24 1 1 10.00 10 9 1 0 0 0
...........................................................................................................TCAGGTACCAGAAGTAGCGCGCG............................................................... 23 1 1 10.00 10 2 0 7 1 0
...........................................................................................................TGAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 10.00 10 0 10 0 0 0
.............................................................................................................AGGTACCTGAAGTAGCGCGCGA.............................................................. 22 1 1 9.00 9 4 5 0 0 0
...............................................................TGCGCTAATCAGTGACCAGGGCT........................................................................................................... 23 1 1 9.00 9 0 0 4 0 5
...............................................................CGCGCTAATCAGTGACCAG............................................................................................................... 19 0 1 9.00 9 4 1 0 0 4
...........................................................................................................TCAGGTACCTGAAGTAGCGGG................................................................. 21 1 1 9.00 9 2 7 0 0 0
...........................................................................................................TCAGGTACCTGAAGTCGCGC.................................................................. 20 1 1 9.00 9 4 4 1 0 0
...........................................................................................................TCAGGTACCTGAAGTAGCCC.................................................................. 20 1 1 9.00 9 3 5 1 0 0
...............................................................CGCGCTAATCAGTGACCAGGGCTA.......................................................................................................... 24 1 1 9.00 9 6 1 0 1 1
...........................................................................................................TCAGGTACCTGAAGTAGGGCG................................................................. 21 1 1 9.00 9 1 7 1 0 0
...........................................................................................................TCTGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 9.00 9 4 1 3 1 0
...........................................................................................................TCAGGTACCTGAAGTAGCGCGCGGGTC........................................................... 27 3 1 9.00 9 0 3 6 0 0
...........................................................................................................TCAGGTACCTGTAGTAGCGCGC................................................................ 22 1 1 9.00 9 7 2 0 0 0
...........................................................................................................TCAGGTTCCTGAAGTAGCGCGCG............................................................... 23 1 1 9.00 9 4 2 2 1 0
...............................................................CGCGCTAATCAGGGACCAGGGCT........................................................................................................... 23 1 1 9.00 9 0 0 2 0 7
...........................................................................................................TCAGGTACCTGGAGTAGCGCGCGT.............................................................. 24 1 1 9.00 9 9 0 0 0 0
...........................................................................................................TCAGGTACCGGAAGTAGCGCG................................................................. 21 1 1 9.00 9 1 8 0 0 0
...............................................................CGCGCTAATCAGAGACCAGGGCT........................................................................................................... 23 1 1 9.00 9 0 0 0 0 9
...............................................................CGCGCTAATCATTGACCAGGGC............................................................................................................ 22 1 1 8.00 8 0 0 0 0 8
.................................................................CGCTAATCAGTGACCAGGGCT........................................................................................................... 21 0 1 8.00 8 2 2 3 0 1
....................................................................TAATCAGTGACCAGGGCT........................................................................................................... 18 0 1 8.00 8 2 0 1 0 5
...........................................................................................................CCAGGTACCTGAAGTAGCGCGCGT.............................................................. 24 1 1 8.00 8 2 2 4 0 0
...........................................................................................................TCAGGTAGCTGAAGTAGCGCGCG............................................................... 23 1 1 8.00 8 3 4 1 0 0
...........................................................................................................TCAGGTACCTGAAGTATCGC.................................................................. 20 1 1 8.00 8 1 7 0 0 0
...........................................................................................................TCAGGTACCTGAATTAGCGC.................................................................. 20 1 1 8.00 8 2 3 1 2 0
...........................................................................................................TCAGGTACCTGAAGGAGCGCGA................................................................ 22 2 1 8.00 8 0 8 0 0 0
...............................................................CGCGCTAATCAGTGGCCAGGGCT........................................................................................................... 23 1 1 8.00 8 2 0 0 1 5
...........................................................................................................TCAGGTACCTGAAGTGGCG................................................................... 19 1 1 8.00 8 1 0 7 0 0
...........................................................................................................TCAGGTACCTGGAGTAGCGC.................................................................. 20 1 1 8.00 8 4 3 0 1 0
...........................................................................................................TGAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 8.00 8 3 2 3 0 0
...........................................................................................................TCAGGTACCTGAAGTTGCGCGCG............................................................... 23 1 1 8.00 8 3 0 4 1 0
...............................................................CGCGCTAATCAGCGACCAGGGCT........................................................................................................... 23 1 1 8.00 8 2 0 2 0 4
...........................................................................................................TCAGGTTCCTGAAGTAGCGCGC................................................................ 22 1 1 8.00 8 0 8 0 0 0
..........................................................................................................GTCAGGTACCTGAAGTAGCGCGC................................................................ 23 0 1 8.00 8 8 0 0 0 0
...........................................................................................................TCAGGTACCTGAAGTTGCGCG................................................................. 21 1 1 8.00 8 0 7 1 0 0
...............................................................CGCGCTAATCAGTGACCGGGGC............................................................................................................ 22 1 1 8.00 8 4 1 2 0 1
...........................................................................................................TCAGGTACCTGAAGTAGCTC.................................................................. 20 1 1 8.00 8 1 5 1 1 0
...........................................................................................................TCAGGTTCCTGAAGTAGCGCG................................................................. 21 1 1 7.00 7 0 6 0 1 0
...............................................................CGCGCTAATCAGTGACAAGGGCT........................................................................................................... 23 1 1 7.00 7 0 1 4 0 2
...........................................................................................................TCAGGTACCTGAAGTGGCGCGCC............................................................... 23 2 1 7.00 7 5 0 1 1 0

Anti-sense strand reads

ACTTTGAGACTTTGGGACCCTACTGCTTGTTCCAGCAAAGGAAAGCGGAACAGAGAATGGAACGCGCGATTAGTCACTGGTCCCGACTCATTAAAATAAGTTATGTCAGTCCATGGACTTCATCGCGCGCACCAAAATCTGGTTCTAAGTAGCGTGCTGCTGCCGCTGTTGCTGCTGTGTTGTTTTTTTGGTA

************************************************..((((...(((.(((((((((.((((..(((..(((((.................))))).)))..))))..))))))))).)))...))))....************************************************
Read size # Mismatch Hit Count Total Norm Total M045

female body

V117

male body
V119

head

...........TTGGGACCCTCCTGCTCGG................................................................................................................................................................... 19 3 10 32.60 326 322 3 1
...........TTGGGACCCTCCTGCTCG.................................................................................................................................................................... 18 2 2 32.00 64 59 5 0
..........ATTGGGACCCTCCTGCTCG.................................................................................................................................................................... 19 3 6 15.33 92 91 1 0
...................................................TGAGAATTGAACGCGCGAT........................................................................................................................... 19 2 1 1.00 1 0 1 0
..............................................................................................................CCATCGACTTCATCTCGCGGAC............................................................. 22 3 2 1.00 2 2 0 0
.......................................................................................................................TCATCGCGCGCACCAAAATCT..................................................... 21 0 1 1.00 1 1 0 0
.......GGCTTTGGGACCCTCCTG........................................................................................................................................................................ 18 2 1 1.00 1 1 0 0
...................................................TGAGAATTGAACGCGCGATTT......................................................................................................................... 21 3 2 0.50 1 0 1 0
..........ATTGGGACCCTACTGCTCGG................................................................................................................................................................... 20 3 2 0.50 1 1 0 0
...............................................................................................................CATCGACTTCATCTCGCGGAC............................................................. 21 3 2 0.50 1 1 0 0
..........ATTGGGACCCTCCTGCTC..................................................................................................................................................................... 18 3 20 0.45 9 7 2 0
...........TGGGGACCCTCCTGCTCG.................................................................................................................................................................... 18 3 16 0.44 7 7 0 0
.........................................................................................................................ATCGCGAGCACCAAAATATC.................................................... 20 3 3 0.33 1 0 1 0
..........................................................................................................................TCGCGAGCACCAAAATAT..................................................... 18 2 5 0.20 1 1 0 0
...........TTGGGACCCTCCTGCTCGC................................................................................................................................................................... 19 3 5 0.20 1 1 0 0
...........TTGGGACCCTCCTGCTCTT................................................................................................................................................................... 19 3 15 0.07 1 1 0 0
.........GATTGGGACCCTCCTGCT...................................................................................................................................................................... 18 3 15 0.07 1 1 0 0
.......................................................................................................................AAATCGCGAGCACCAAAAT....................................................... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004585:5257550-5257742 - dwi-mir-275 Known_mirbase TGAAACTCTGAAACCCTGGGATGACGAACAAGGTCGTTTCCTTTCGCCTTGTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT-CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGATTC----ATCGC----ACGA------------CGAC--------------------------GGCGACAACGACGACACAAC------------AAAAA-AACCAT
droVir3 scaffold_12963:15419968-15420064 - dvi-mir-275 Known_mirbase G---------------------------------------------CGCCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTTGGTTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGT-------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:18399371-18399491 - dmo-mir-275 Known_mirbase --------------------------------------------------GTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTCGATTATC---TCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT--C----AACGC----TCTG-----------C----T-------AGC-----------------------------------------------AATTC-TAGCAT
droGri2 scaffold_15126:5008387-5008533 + dgr-mir-275 Known_mirbase T------------------------------------CTCTTTCTTCGTCGTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGGTTTTGATTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCATT--C----AACAA----ACGGCGCCTGCTCAGC--------------AAACATCGGC----------------------------------AAA----------CAT
dp5 4_group1:4175741-4175851 + dps-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTT-----TTT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAAC-AT-CTGT-----------------------GTGGCATCATC-------------------------------------------------------------GT
droPer2 scaffold_5:1086438-1086548 - dpe-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTT-----TTT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAAC-AT-CTGT-----------------------GTGGCATCATC-------------------------------------------------------------GT
droAna3 scaffold_12916:15333996-15334107 + dan-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CC---------GCC----------------------------ATACAAA-----------------------------------------A---GTA-TATAAT
droBip1 scf7180000396572:1689371-1689494 - --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CCGCCATATCCGAC----------------------------ATACA----TGC----------------------------------AAA---GTA-TATAAT
droKik1 scf7180000302384:54810-54922 - --------------------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CA-------------------------------------TCGC---------------------------------------------CAACAACTCATACCTC
droFic1 scf7180000454115:155688-155830 + --------------------------------------------------GTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT-CT-CCATATCCAGCACGT------------TTAG--------------------------CTCGCCGTCGAGTCCTCGAAACAAATCCCAG-------------
droEle1 scf7180000491028:1624840-1624937 - --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TC--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-TCATT------------------------------------------------------------------------------------------------
droRho1 scf7180000766421:7648-7752 - --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTTCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-TCATTTCCAG-------------------------------------------------------------------------------------------
droBia1 scf7180000302422:9125536-9125642 + --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACAT-CT-CCACATCCAC---------------------------CGC---------------------------------------------C---------------
droTak1 scf7180000415604:142408-142521 - --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT-CT-CCAAC-------------------------CCATCTC------------------------------------------------CA------A-ACGCAT
droEug1 scf7180000409463:614713-614824 + T-------------------------------------------------GTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGGTTT-----TT--ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT-CT-CCATAT-----------------------GTCTTCATCGC---------------------------------------------A---------------
dm3 chr2L:7425801-7425920 + dme-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CT-CCATCTTCACC----------------------------ATATAAATAAGC----------------------------------GAA-------------
droSim2 2l:7179775-7179894 + dsi-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CT-CCATCTCCGCC----------------------------ATATAAATAAGC----------------------------------CAA-------------
droSec2 scaffold_3:2941261-2941380 + dse-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CT-CCATCTCCGTC----------------------------ATATAAATAAGC----------------------------------CAA-------------
droYak3 2L:5473753-5473874 - dya-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-CCAACTCCACG---------------A----T-------ATATAAATAAGC----------------------------------CAA-------------
droEre2 scaffold_4929:16344527-16344673 + der-mir-275 Known_mirbase --------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-CCATCTCCACC----------------------------ATATAAATAAGACAAATGCTCGCAGGCGAGTCCTCGAAAGAA--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGAAACTCTGAAACCCTGGGATGACGAACAAGGTCGTTTCCTTTCGCCTTGTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT-CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGATTC----ATCGC----ACGA------------CGAC--------------------------GGCGACAACGACGACACAAC------------AAAAA-AACCATSizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23165492.006549256745745267187377772
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21163267.006326762157482804432331420
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22150140.0050140871189421861259582508
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................2015450.0054501716886152798332
...............................................................CGCGCTAATCAGTGACCAGGGCT........................................................................................................................................................................2314820.00482028561011193238522
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2414288.004288513150102537448
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2212683.002683226522918
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2412258.0022581513352880179
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2212248.002248070918149229
...............................................................CGCGCTAATCAGTGACCAGGGC.........................................................................................................................................................................2211448.00144870114533150419
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2111210.001210011865163
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................201915.0091508843280
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................221911.0091103307746737
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................231618.0061801061045844
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................191563.0056303143919317
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191387.00387043153218
...............................................................CGCGCTAATCAGTGACCAGGGCC........................................................................................................................................................................231341.003413400001
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201283.002830611818915
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211266.002662137205849
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231265.0026524155213926
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................241236.002361018981712
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................231194.0019401055759
...............................................................CGCGCTAATCAGTGACCAGGG..........................................................................................................................................................................211157.0015757763039
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................241140.001400690701
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191139.001390133141
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................231138.001380137001
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251132.0013209371121
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................21197.009701510675
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26194.00940740200
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................21192.0092041870
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................18192.009203025010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................25186.00860390443
................................................................GCGCTAATCAGTGACCAGGGCT........................................................................................................................................................................22182.0082272323
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23171.0071071000
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................21166.0066143571
...............................................................CGCGCTAATCAGTGACCAGGGCG........................................................................................................................................................................23161.0061600001
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................24158.00581201279
...............................................................CGCGCTAATCAGTGACCAGGGCTT.......................................................................................................................................................................24153.00532023550
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................24151.0051149100
...............................................................CGCGCTAATCAGTGACCAGGGCTC.......................................................................................................................................................................24146.0046404011
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................24145.0045835020
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20139.0039025365
...............................................................CGCGCTAATCAGTGACCAGG...........................................................................................................................................................................20135.0035227042
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................25134.00340141118
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................21133.0033033000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................24130.0030050250
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18128.0028042193
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................26126.00260120131
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................26126.0026023012
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................24125.00250120130
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................23124.0024050190
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................19124.0024022011
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19124.0024014343
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................22122.0022182110
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20120.002007076
.................................................................................................................TACCTGAAGTAGCGCGCG...........................................................................................................................18119.0019015022
............................................................................................................TCAGGTACCTGAAGTAGCCGC.............................................................................................................................21118.001809441
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22118.001807434
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18117.0017011231
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................21117.0017017000
............................................................................................................TCAGGTACCTGAAGTAGCGCCG............................................................................................................................22116.0016013012
.............................................................................................................CAGGTACCTGAAGTAGCGCGCC...........................................................................................................................22116.0016015100
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA.........................................................................................................................25116.0016060100
..............................................................................................................AGGTACCTGAAGTAGCGCGA............................................................................................................................20116.0016041110
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.......................................................................................................................27115.0015011040
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22115.0015015000
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................18115.0015011130
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................23114.001405360
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18114.0014014000
................................................................GCGCTAATCAGTGACCAGGGC.........................................................................................................................................................................21113.001325015
............................................................................................................TCAGGTACCTGAAGTAGCCG..............................................................................................................................20113.001309040
.............................................................................................................CAGGTACCTGAAGTAGCGCGCA...........................................................................................................................22113.0013012010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................25112.001215060
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................22112.001203090
...............................................................CGCGCTAATCAGTGACCAGGGCTTT......................................................................................................................................................................25111.0011010001
...........................................................................................................GTCAGGTACCTGAAGTAGCGCG.............................................................................................................................22111.0011011000
...............................................................CGCGCTAATCAGTGACCAGGGCTGA......................................................................................................................................................................25111.001102810
..............................................................................................................AGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2219.00904050
...............................................................CGCGCTAATCAGTGACCAG............................................................................................................................................................................1919.00944010
...............................................................CGCGCTAATCAGTGACCAGGGCTA.......................................................................................................................................................................2419.00916110
.................................................................CGCTAATCAGTGACCAGGGCT........................................................................................................................................................................2118.00812023
....................................................................TAATCAGTGACCAGGGCT........................................................................................................................................................................1818.00852001
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................2318.00808000
droVir3
G---------------------------------------------CGCCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTTGGTTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGT-------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................221937057.00937057396310941801214841797938145415502187191818202832880769521361700520177514401258261714821997267028752285338017734530786536386714498119812918205599045707197654352020125151561910221391462715311012749352418557035532578658956800622605334483377216302183473146421889189209497592748110911132778
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................231564088.005640881718524113324676505711822287231511768269623762984220210712181223365370312404300561188020601877148624401214636111143736468232484225610781044544820598043691518221715181420383369461632161249311759838118924003961364738299800105267928298562838319772130923275416604696460617572405760268151
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................211244896.00244896387501353253228097141093413541252680347819157653144836431210121430324611092492722243172714232323168623972842111026202197107326622014256921298846502102431243617436445982372519252186356421123166581783690312038154816367992275953618914733163951874622393
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................241136259.0013625947212943321523489211884286295210237349636663263826320710622974387033656071822837117396111371133200413333210200256920188537311521657293909285231431202163921091850343525091223472226127043
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................20171545.007154525831789882203434826331031120988114979323282902642603932062164720430368641527442711358770558397568661949646481330374634366112031427221412528801351818483288902267852851739829072135222054226398163517833
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26149367.004936700131820002012613220010000002109224000012011161002030369260222010871655322310183010852926113059155224028711511221319798999158582949511175
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................24138876.00388761086652440436304111012412465306393231217261152331272295012015610573125503874202683901741655613338616785350542103350231401365343509422804833635175385113755359919792022338326174022882276323662827
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................22110656.001065610077426123638104510314941566641234968941456518365243715361549228126608265122101000000001000000009022483946614191442454403417343217401492471595745
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................2418910.00891011415771070310542122032743201221632625121684414501100000000000200000211173724291268132121143357291107961872182016531793
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2218795.008795100840231214030105401041524250363921111719179813226664449031214280119241679189432008249410100001101000100001852993406344665746207392741182423153416394516551
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2317024.00702429271900113981351586883136411212321125612510786356132156785680177592191618218951154474134380211000010031113232452439444922876124456191205136742501891716183756
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................2516088.00608810840000403266361011000003113921000180142111139100110100110010000000305016634545722468882138723318911049419511170
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................2413949.0039490023141040401248060000000031232214111010210803158374130140000000000000000000010506420244319772315101261181560516449541
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................2313906.003906121879030931341153139911716102766145141724101123102110233038261791330000000001100000001269260121202492811044224118262587346407386393
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1913853.0038533060047167336312475184441023126111814821015675037794214524294268628052516562416310000000001001100101028220682515719059272120716842724895117
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2313615.003615001901696121318168171515326131340161743928221718292250165955939191122112216200100000000000102209122155910291521766661315310346370362312345
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................2313199.00319956858930510377430844768232133733226392531418108335054011201153012471537291141262364834682992614453571245373243
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................2412655.00265520161410608095810013210011531614912801024911145914712000000000000000000001090101271638853543347445259305295326449
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2111980.0019801012473100109041120300102223211213102430416000000000000000000000010125600182152829111932219867679118
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.......................................................................................................................2711880.001880002200003001355100000000012121000060662743001020000000000000004010171471887013136261039424329269366
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................2611380.00138000430000300550200000100010541001111011522113000100000100001000001000121056535134311620301944274196162224
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................2211316.00131639109416611139951233215712171610289165119214212191423231051451100010000011015711456292125251021247811112710758111715
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................2011144.0011440010121701321027420001100001222102241012220000000000000000000002218010122033430046106
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2211137.0011370275612000101023010011030201012711143100310001000000000000000000392902232251725162721029352348
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................2111008.00100841473561229309231534115510274122841219983426534038141775359530000000000000000000620164121123222925101612103167108
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201987.00987407116871088131818794111213126314926135148243125332120177382513300000000000000000001391360102674131261410152071521
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................241968.009680015600103002161000000000140700000403527960000000000000000000000304118419564320110397568109109
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA.........................................................................................................................251927.0092700630000000323000000000108282000014054691710000000000000000000000004654771523001713148146125160
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................211842.00842002481112454116201010010014552221045031411601000000000000000000010150220179169571000204231395555
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................241792.00792211184000000013111010010011000000322001630000100000000101100002349516181469493733403618819676110
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251782.007821115101408162923061441311275122123211416191382130001000010010000000102441361014189474135215316548475057
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................231751.007510012700200011130000000000350210001605520810000000000000000000010210211301444001003139563277110
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................181713.00713006432617494029490515627322321328813121132312259171471152990000000001000000000001211071314522313211561725
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191691.006910054288631301822117585011327011695578761013615191513710000000000000000000020417401057320000023105
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................221668.006683981330012020050000010201011002201015241100000000000000100000002401612115762377010796133142
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................251650.00650202100000000310010030000100001011240314410000000000000000000000354224301627381515222213818691102
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTAA.........................................................................................................................251598.00598001300100003500000000000002000007043136100000000000000000000000002536218100000151151019785
...............................................................CGCGCTAATCAGTGACCGGGGCTC.......................................................................................................................................................................241529.00529139401611410010000100233194130001555804000012000000000000000013101741100031503221515300020
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................211529.005294095884841013100328868641410143105229122492337733109400000000000000000004739041121091010010301251
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTAA.......................................................................................................................271404.00404001100000009192000000000012200000302654400000000000110000000300074181817992152858644967
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................241395.0039500430000200170620113124002550202150611161510000000000000000000010802117148354113162324318181422
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGATA........................................................................................................................261392.00392002000000002900000000000011100004002510000000000000001000000000101820131537157770556873
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................201380.00380001111000111031000000000120501125212312410000000000000000000113000131130000005652290113
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA........................................................................................................................261351.0035100331212501105140100013000202222004045734000000000000000000002054109642710215196629202725
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................251348.00348105400222005111110001102200200003612310800000000000000000100010161201778101697915637392942
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC.........................................................................................................................251313.003131261230300050101011225191020000178920180100030000000000100000001021441222412122136301400822
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................221304.00304001361010100010000000020039576000010086251120000000000000000000020307022265020000423153435
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAC..........................................................................................................................241301.003010011102000011000000000000000000020003020000000000000000000000102034303340013458473859
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191286.002860023800000211010000000000000000001100000000000000000000000000011300230001031355310
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAT........................................................................................................................261259.0025900020000000020000000000000000000000120000101010010000000000100010172010330012554453353
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC.........................................................................................................................251256.0025601050000000030000000000100100000000000000000000000000000010000320137310116655446384540
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................191234.002340019033220162717647200102170341020173842100220000000000000000000000810010100000002251
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211225.00225101151140322103100010011000000011210421202101000100010000100001332600017101082217033025
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................261222.00222008700010007142110001010220108158703003200000001000100000000020761159735143053310121011
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................181205.00205107110619182919517101100019103001021040110011220000000000000000000011220011010000002002
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................241204.0020430292513430000087043686112412356150102000000000000000000000000116021011015713900525
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................211201.00201001414003301112100000071011100110010331001000000000010000000012012000293412010002567108
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231197.0019700224011423204010010270110011181554210112030000000000000000000013802048400001029198
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTC..........................................................................................................................241156.0015624430010000000101100310000005727030000010000000000100000000102000434412118186468810
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGCAA........................................................................................................................261156.001560000000000024000000000000010000010004100000000000000000000000003013198010000153031815
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGACA........................................................................................................................261147.0014700000000000020000000000000000000000110200000000000000000000100000010116001010518272725
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTG..........................................................................................................................241136.001363002000001000000000000011000000000011000000000000000000000020100079711210415541191316
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................231134.00134001210000000010000000000000100000000100000000000000000000000000001450740030225212422
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................201126.00126102712001312000140230113201432528112532010000000000000000000223100212013100020200
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................181115.0011500902346473081110110200521113321144532210000000000000000000201400011000000012000
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................221114.0011410661221121000031000001100201111100000000000000000000000001011632500001102001000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................231111.0011100830002260030000000302102005609022123000000000000000000000001700064200000022448
............................................................................................................TCAGGTACCTGAAGTAGCGCGTAA..........................................................................................................................241110.0011010220000000110000000001100212001312116210000000000000000000020400011134010000661462
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................231103.0010310291000000000000010000000000010202010010000000000000000000000270102169618507513
............................................................................................................TCAGGTACCTGAAGTAGCGCGTC...........................................................................................................................231101.0010141111080000000001000050110100569707000001000000000000000000000900011013604021121
............................................................................................................TCAGGTACCTGAAGTAGCC...............................................................................................................................191100.00100201010500090000010000921003008921606000105000000010000000102000100010100201000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTC........................................................................................................................26198.00981022010000000011000020000000128603020001000000000000020001000280033362211024889
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAC........................................................................................................................26197.009700040000000010000000000000000000000000000000000000000000000000000643121011226151911
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22186.008620210001040000000000300100100003001110010000000000000000000000000149173316014258
.................................................................................................................TACCTGAAGTAGCGCGCG...........................................................................................................................18182.00820050012355476310200151030010021004000000000000000000000000001042011010101021023
...............................................................CGCGCTAATCAGTGACCGGGGCC........................................................................................................................................................................23181.00812613236000000000000000000000000100000000000000000000000000000000200000000010000000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23180.008010180010000000000010000000000000000000000000000000000000000000100033000010001910616
............................................................................................................TCAGGTACCTGAAGTAGCGCTA............................................................................................................................22179.00790023101001014100000010012012100040111021000000000000000000010100011123000010221310
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCC..........................................................................................................................24177.0077101000000000200000000000000001110000000000000000000000010002000002404122711601576
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGCA.........................................................................................................................25175.00750011000000002000000000011000000010025320000000000000000000000000025003000021211813
...............................................................CGCGCTAATCAGTGACCGGGGCTA.......................................................................................................................................................................24173.00730010002012001040112101302053100200034220000000000000000001000502300031210321104
..............................................................................................................AGGTACCTGAAGTAGCGCGCGA..........................................................................................................................22172.007200200000100470200112011221100000110041100000000000000000000102020110301022312114
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20167.00670089010212003000000020010000103300140001000000000000000000011500053200000013112
............................................................................................................TCAGGTACCTGAAGTAGCGCGTTA..........................................................................................................................24165.00650000000103004002010030101011261240114101000000000000000000010900023000000002124
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20164.00641081110424120210230120011010251300111000000000000000000000002900000000000000000
............................................................................................................TCAGGTACCTGAAGTAGAA...............................................................................................................................19164.00640000000000000000000000000000000000000000000000000000000000000000015182000000155414
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................21161.006100561000000000000000000000000000100000010000000000000000000000100010000000000000
droMoj3
--------------------------------------------------GTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTCGATTATC---TCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT--C----AACGC----TCTG-----------C----T-------AGC-----------------------------------------------AATTC-TAGCATSizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22169767.006976713999171410461455431958358
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23148251.004825110316969242334121804113090
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21139068.0039068129991965273359178935579
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................20111927.001192736342968713762381535
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2213794.0037941669254971679176
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2413503.00350359515426412394293
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2412994.0029944085550651711705
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2211507.001507478421124701251
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2311437.001437607218210679542
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1911195.0011956387914375152
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2311075.001075196104048647134
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2111057.0010578984201485
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................201889.008897790011063
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................221748.00748652252807
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................241642.0064273761152619
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................231588.0058880322938184
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231491.00491544112136932
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191288.00288268000173
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211229.0022933222127
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................241167.00167958125011
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251166.00166133355587
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................241161.001611124002718
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201151.00151651012114310
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211140.0014048722301419
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................211124.00124347116615
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................211116.0011610800080
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................231103.0010352201417
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26197.009734300573
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................24186.008614331605
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................21186.008616210598
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................19185.00853212222710
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................22185.0085413721616
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................25184.00845300724
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................24181.00811411024212
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................25176.007612500563
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................24172.0072126133911
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................22170.007049100182
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................22170.007034211293
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................18168.006826068271
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................21161.00614205635
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................26159.0059141032417
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................23158.0058100403014
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23153.005339000131
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18144.00443900041
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................20143.00433502114
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................22142.00423710202
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................21135.00352800070
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20133.003315200124
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC.........................................................................................................................25132.00327021715
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20129.00292100251
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................24129.00291801244
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................23126.00261900070
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19126.00261210094
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18125.00251430152
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTC..........................................................................................................................24120.0020512084
...............................................................CGCGCTAATCAGTGACCGGGGCC........................................................................................................................................................................23120.00200000191
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................25120.0020410069
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC.........................................................................................................................25119.00190000190
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20118.0018800082
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................19118.00181600101
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA.........................................................................................................................25117.00171010042
............................................................................................................TCAGGTACCTGAAGTAGCGCGTAA..........................................................................................................................24117.00171400030
............................................................................................................TCAGGTACCTGAAGTAGCGCGAC...........................................................................................................................23116.00160000160
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................26115.0015800070
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18115.0015800133
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAC..........................................................................................................................24115.00151000140
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22114.0014301154
..............................................................................................................AGGTACCTGAAGTAGCGCGA............................................................................................................................20114.0014730022
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................18114.0014600071
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22114.00141400000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGATT........................................................................................................................26113.0013210091
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGCAA........................................................................................................................26112.0012700041
............................................................................................................TCAGGTACCTGAAGTAGCGCTA............................................................................................................................22112.0012400062
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA........................................................................................................................26112.0012220062
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTAT.........................................................................................................................25112.00121100100
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23111.00111100000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGCT.........................................................................................................................25111.0011100181
.............................................................................................................CAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................23111.00111100000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23110.0010210061
droGri2
T------------------------------------CTCTTTCTTCGTCGTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGGTTTTGATTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCATT--C----AACAA----ACGGCGCCTGCTCAGC--------------AAACATCGGC----------------------------------AAA----------CATSizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2315759.00575914314328
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................2213179.00317913071872
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................2111779.0017797131066
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................231774.00774341433
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................201479.00479268211
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................241256.0025698158
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................231145.0014530115
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................221109.001091072
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................21193.0093930
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................19191.00915239
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................22189.00892663
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................20162.0062611
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................23153.0053647
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................22150.0050446
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................21145.0045639
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................23142.0042537
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................22129.0029272
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................18128.0028280
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................19123.0023230
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................20120.0020812
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................24117.001798
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................25117.0017611
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................19114.0014410
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................21111.0011101
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................22110.001064
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................2117.00734
...............................................................CGCGCTAATCAGTGACCGGGGCC........................................................................................................................................................................2316.00606
...............................................................CGCGCTAATCAGTGACCGGGGCA........................................................................................................................................................................2316.00624
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................2416.00633
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................1815.00550
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................2615.00532
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................2415.00523
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................2114.00413
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2314.00440
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2214.00440
................................................................GCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................2113.00330
.................................................................CGCTAATCAGTGACCGGGGC.........................................................................................................................................................................2012.00220
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................1912.00220
...............................................................CGCGCTAATCAGTGACCGGGGCG........................................................................................................................................................................2312.00202
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................1812.00211
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2412.00220
.................................................................CGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2112.00211
............................................................................................................TCAGGTACCTGAAGTAGCC...............................................................................................................................1911.00101
...............................................................CGCGCTAATCAGTGACCG.............................................................................................................................................................................1811.00110
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................2311.00110
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................1811.00110
..............................................................................................................AGGTACCTGAAGTAGCGCGCC...........................................................................................................................2111.00101
...............................................................CGCGCTAATCAGTGACCGGGGCTGG......................................................................................................................................................................2511.00110
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................1911.00110
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................2511.00110
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................2311.00110
...............................................................CGCGCTAATCAGTGACCGGGGCTG.......................................................................................................................................................................2411.00110
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................2011.00110
............................................................................................................TCAGGTACCTGAAGTAGCCG..............................................................................................................................2011.00101
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................2211.00110
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................2111.00101
.................................................................................................................TACCTGAAGTAGCGCGCG...........................................................................................................................1811.00101
.......................................................................................GTTTTGATTATC---CCACAGGT................................................................................................................................................2011.00110
............................................................................................................TCAGGTACCTGAAGTAGCGCGTC...........................................................................................................................2311.00110
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................2611.00110
.............................................................................................................CAGGTACCTGAAGTAGCGCGCA...........................................................................................................................2211.00110
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................2011.00110
...........................................................................................................GTCAGGTACCTGAAGTAGCGCG.............................................................................................................................2211.00110
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................2011.00101
............................................................................................................TCAGGTACCTGAAGTAGCA...............................................................................................................................1911.00110
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTG.........................................................................................................................2511.00110
..........................................................................................................AGTCAGGTACCTGAAGTAGCGCG.............................................................................................................................2311.00110
dp5
--------------------------------------------------GTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTT-----TTT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAAC-AT-CTGT-----------------------GTGGCATCATC-------------------------------------------------------------GTSizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21169204.006920411530102608393268813037224633776558
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22157526.0057526333842053081407736166769465914991919
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23131465.0031465517258639476141163977055677062329
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................20114661.0014661210995121929138634711913882110
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2219334.0093340850536513126934480
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2218238.008238363133311271131699745213917
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................2013379.00337903351932212000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2412846.0028461148883854123691101127143
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2112595.002595125061553553115
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1912044.00204401657532328176765224
...............................................................CGCGCTAATCAGAGACCGGGGCT........................................................................................................................................................................2311359.0013594844232617581361722212
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2411161.00116108781225945960159
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2211147.00114701088450638123
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191804.00804080010102000
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................211528.00528052510101000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231441.00441128833181884116
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201391.00391022068321121147
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231384.0038402664729791151
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211363.00363016626128145168
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................211358.00358035400003010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................231343.003430233321111051212
...............................................................CGCGCTAATCAGAGACCGGGG..........................................................................................................................................................................211331.0033102502156158341
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191310.0031001982032564414
...............................................................CGCGCTAATCAGAGACCGGGGC.........................................................................................................................................................................221269.0026911415747132683
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251246.00246012034111902141
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................241208.00208011945181613303
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................231198.00198010525312440423
...............................................................CGCGCTAATCAGAGACCGGG...........................................................................................................................................................................201176.0017601231017191321
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................181116.00116011501000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................231102.0010208960700000
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................211102.00102073100647110
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20196.009608420601201
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20190.009006762078000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................24187.008708310002010
...............................................................CGCGCTAATCAGAGACCGG............................................................................................................................................................................19183.008306510133226
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................23178.007807100002221
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23169.006906810000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................26166.006604901009160
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................24165.0065033110129000
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18165.006505110327010
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................18164.006404951120213
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26163.006305470000200
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................21163.0063093831111000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................24157.005704910104200
................................................................GCGCTAATCAGAGACCGGGGCT........................................................................................................................................................................22152.005204800003001
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................22148.004804310301000
...............................................................CGCGCTAATCAGAGACCGGGGCTT.......................................................................................................................................................................24148.004802901006228
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................21147.004702892314000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCG.............................................................................................................................22147.004704700000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................25144.004403460103000
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................22143.004303640201000
..............................................................................................................AGGTACCTGAAGTAGCGCGT............................................................................................................................20142.004202900029020
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................18141.004104000100000
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22140.0040015120313303
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19138.003803211103000
..............................................................................................................AGGTACCTGAAGTAGCGCGA............................................................................................................................20135.003502910401000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23132.0032020100110000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23131.003103100000000
...............................................................CGCGCTAATCAGAGACCGGGGT.........................................................................................................................................................................22129.0029014000213000
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18126.002602500100000
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20124.002402100102000
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22123.002301502105000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCC..........................................................................................................................24120.002001041005000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCC...........................................................................................................................22120.002001700012000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAC...........................................................................................................................23119.001901431001000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................24118.001801220103000
.............................................................................................................CAGGTACCTGAAGTAGCGCGTT...........................................................................................................................22117.001701600001000
...............................................................CGCGCTAATCAGAGACCGGGGCC........................................................................................................................................................................23117.00170089000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTTA..........................................................................................................................24116.00160810105010
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22116.001601500010000
................................................................GCGCTAATCAGAGACCGGGG..........................................................................................................................................................................20115.001501400000100
...............................................................CGCGCTAATCAGAGACCGGGGCTTT......................................................................................................................................................................25114.001401300001000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTAA..........................................................................................................................24114.001401010002100
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................24114.00140930001100
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................25113.00130600014020
............................................................................................................TCAGGTACCTGAAGTAGCA...............................................................................................................................19112.00120900020100
..............................................................................................................AGGTACCTGAAGTAGCGCGCGA..........................................................................................................................22112.00120900003000
............................................................................................................TCAGGTACCTGAAGTAGCT...............................................................................................................................19111.00110910010000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................24111.001101100000000
..............................................................................................................AGGTACCTGAAGTAGCGCGCT...........................................................................................................................21111.00110210008000
...............................................................CGCGCTAATCAGAGACCGGGT..........................................................................................................................................................................21111.00110600121010
............................................................................................................TCAGGTACCTGAAGTAGCGCGGAG..........................................................................................................................24111.001100000001100
.............................................................................................................CAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................23110.00100800002000
................................................................GCGCTAATCAGAGACCGGGGC.........................................................................................................................................................................21110.001001000000000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................24110.001001000000000
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................19110.00100810001000
..............................................................................................................AGGTACCTGAAGTAGCGCGCC...........................................................................................................................2119.0090700002000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGA............................................................................................................................2319.0090900000000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGT............................................................................................................................2319.0090900000000
...............................................................CGCGCTAATCAGAGACCGGT...........................................................................................................................................................................2019.0090601011000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAC..........................................................................................................................2419.0090630000000
...............................................................................................................GGTACCTGAAGTAGCGCGT............................................................................................................................1918.0080700001000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTC...........................................................................................................................2318.0080231011000
...........................................................................................................GTCAGGTACCTGAAGTAGCGC..............................................................................................................................2118.0080800000000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCA...........................................................................................................................2218.0080800000000
................................................................GCGCTAATCAGAGACCGGG...........................................................................................................................................................................1918.0080800000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................2618.0080800000000
.............................................................................................................CAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................2318.0080800000000
droPer2
--------------------------------------------------GTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTT-----TTT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAAC-AT-CTGT-----------------------GTGGCATCATC-------------------------------------------------------------GTSizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21127998.00279983917821182895419185438
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22125709.002570948516158547145430084057
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23111397.0011397143510419212529043802
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................2015110.005110123232267271594734
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2212945.00294511478641142181070
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2212519.002519623621145923
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2111013.0010132964062615
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................241986.009861240025717498
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................201978.0097809653352
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................191806.0080604881666125111
...............................................................CGCGCTAATCAGAGACCGGGGCT........................................................................................................................................................................231567.0056794220133913665
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................221319.0031913022482
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................241296.002964419047051
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191205.0020502010211
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231199.001990563419117
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231150.0015010832132418
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................231136.001360800191621
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................211125.0012501241000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251103.0010302106076
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................20199.009915455313
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................23197.0097148129819
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................21189.00890880010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................24188.00887691416
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................19186.0086042168155
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................22175.00752674110
...............................................................CGCGCTAATCAGAGACCGGG...........................................................................................................................................................................20156.0056023271410
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................21153.0053019116161
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................18148.004801711281
...............................................................CGCGCTAATCAGAGACCGGGGC.........................................................................................................................................................................22141.004115184211
...............................................................CGCGCTAATCAGAGACCGGGG..........................................................................................................................................................................21139.00390270381
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................21138.00380207335
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18130.00300290010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................24129.002901201511
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................21129.00290180245
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20126.00260240200
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23126.00260101258
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................23124.00240210201
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18122.0022092371
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................21122.00220111163
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................24121.00210210000
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20119.0019080443
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................23118.00180171000
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22117.00170201212
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23116.00160160000
................................................................GCGCTAATCAGAGACCGGGGCT........................................................................................................................................................................22115.00150120012
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23115.00150150000
...............................................................CGCGCTAATCAGAGACCGGGGCTT.......................................................................................................................................................................24114.0014650012
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................18112.00120100101
...............................................................CGCGCTAATCAGAGACCGGGGT.........................................................................................................................................................................22112.0012040224
..............................................................................................................AGGTACCTGAAGTAGCGCGT............................................................................................................................20112.0012021261
...............................................................CGCGCTAATCAGAGACCGG............................................................................................................................................................................19112.0012070032
.............................................................................................................CAGGTACCTGAAGTAGCGCGCC...........................................................................................................................22111.00110110000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................26111.0011050006
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19111.0011063011
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................25111.00110001010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................24111.0011170111
...............................................................CGCGCTAATCAGAGACCGGGGCC........................................................................................................................................................................23110.0010910000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26110.0010370000
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18110.0010150112
...........................................................................................................GTCAGGTACCTGAAGTAGCGCG.............................................................................................................................22110.00100100000
...............................................................CGCGCTAATCAGAGACCG.............................................................................................................................................................................1819.009300060
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2219.009080010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................2419.009341010
............................................................................................................TCAGGTACCTGAAGTAGCGCGTTA..........................................................................................................................2419.009020007
...............................................................CGCGCTAATCAGAGACCGGGT..........................................................................................................................................................................2118.008200123
..............................................................................................................AGGTACCTGAAGTAGCGCGA............................................................................................................................2018.008071000
............................................................................................................TCAGGTACCTGAAGTAGCCGC.............................................................................................................................2118.008070100
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAC..........................................................................................................................2417.007150010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC.........................................................................................................................2516.006420000
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................2216.006041010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................2516.006230001
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCC..........................................................................................................................2415.005010112
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2415.005040001
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................1915.005040001
.............................................................................................................CAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................2314.004030001
droAna3
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CC---------GCC----------------------------ATACAAA-----------------------------------------A---GTA-TATAATSizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................221250221.002502211029281250552854254593967443
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................231248276.0024827621614914826455235369527541
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21192111.0092111259493729562601164191992244
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................20122089.00220893243132047053293956652
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................24120328.00203281742197110533401533
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................22112472.0012472122661081102166
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2116927.00692763714676123140
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2216778.00677832781485741541525262
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2214804.004804103029762791343769
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2414626.0046262909140225655229
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2313165.0031652434443143915679
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1912280.002280797446245493227
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2311808.001808106049251268378
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................2011684.001684150914843146
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................2511565.0015651335161449160
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................2311525.00152565470936147141
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................2411137.00113781426604845
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................231972.00972936801027
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211886.0088679724317936
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201556.0055635213317191718
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231553.005533251602416721
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211488.0048832341333745
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231461.0046111530397189
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................211417.00417299930423619
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................211366.00366337829320518
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................221328.00328274367155
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................261321.00321263500845
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................211320.003202359572143
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................221319.0031919228421182
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191258.00258199510062
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................241251.002511151265014
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................231222.00222203150004
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................181215.002159083015126
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................221201.0020119420014
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................241193.00193156603217
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191191.0019172434212193
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................241180.00180162110034
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................211170.0017016250111
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................251158.00158113900729
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................241151.0015115100000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................261146.0014660860000
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................201136.00136105404518
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................201127.00127137413342
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................241126.0012676315077
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................251125.0012564552004
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................201109.0010994200112
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................221100.0010084410110
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................23177.007715466091
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................24168.00686500003
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................19167.00675900161
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23165.0065183213011
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19163.006343141032
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................19163.00635800023
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................22162.00625300072
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23161.00616100000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCA...........................................................................................................................22161.00615550100
............................................................................................................TCAGGTACCTGAAGTAGCGCCG............................................................................................................................22153.00535010002
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................21152.00524290010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA........................................................................................................................26152.005238200111
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18151.005133120042
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................25150.00503780032
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................26148.004829162001
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20148.004881620166
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................24148.00488335020
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................23147.00474520000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC.........................................................................................................................25145.00454040001
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................22144.00446312041
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18144.00444040000
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18138.00389166322
droBip1
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CCGCCATATCCGAC----------------------------ATACA----TGC----------------------------------AAA---GTA-TATAATSizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CA-------------------------------------TCGC---------------------------------------------CAACAACTCATACCTCSizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------GTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT-CT-CCATATCCAGCACGT------------TTAG--------------------------CTCGCCGTCGAGTCCTCGAAACAAATCCCAG-------------SizeHit CountTotal NormTotal
No Reads
droEle1
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TC--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-TCATT------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTTCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-TCATTTCCAG-------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACAT-CT-CCACATCCAC---------------------------CGC---------------------------------------------C---------------SizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TT--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT-CT-CCAAC-------------------------CCATCTC------------------------------------------------CA------A-ACGCATSizeHit CountTotal NormTotal
No Reads
droEug1
T-------------------------------------------------GTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGGTTT-----TT--ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT-CT-CCATAT-----------------------GTCTTCATCGC---------------------------------------------A---------------SizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CT-CCATCTTCACC----------------------------ATATAAATAAGC----------------------------------GAA-------------SizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2317487238.00748723820001011101310413342880009002372243428724034860715135652175131089268353310131289327763037108105670447519247101757117829123035691734631232412600000000000000000000090817534775825392089231461921216313848582462088170113176749244414662012528424961082026611612319112171032674490853271112355743497456595629781423102613233048285127353959186193366249432002428742651535209109242863145941129403874481660483683114186113971594132420012866892974096718161180155570245715368156715659975328803595680285060352823318433126713395113198526561839811501913900287058752488588168350737385524240258823457073005116602150930135340562689931162441703742942121880519228918129007273523530876546461054139201154183981932216491947272152987166152159115774803152331316785413034493134126939760785717227602018484228653952276118668032737369595316408701913968951711600815857416115118417495755165993937817851787036110689270478596521223811243692667300117931635519864990131283113544149637485633139538347351553752189844149926811842335814083066348536830503062617354459164452502091159381288322796813369916841658890839
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................2115583494.0055834940000101219392948153140005001500106561123804237963212467939522261195392361340953221323057840188796237313151976940170536696471888030901524247218000000000000000000000304427322629122215324114229562326169299422317924339996114120231285202252753449811881107301292331012961915145370301117332231297103422813430281398368991207386360366710610426169171040582381415313041767512450152749132584024065455793922571411261123181465121827821396173763175805637329046124743231477183843332310722804934749318019304116451059945056727311669010020179228841413127615462126663844232868553462778437315762308351991818603155944411839565319492497236467126132800013268503112864560232720127860112353285088546532657526613819171915732139621766327175513621983053834964651338992403793661220417716461155158150379451583875417623270941989220004267381642353404214802049315534557316361153809519267987891041788228132558187704889449214122815656020228737411219233119072019310444811474837153406926489183053866250320160128502831374218680636171329293156252787533432409281060506196454619116005178881973411550010089913
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................2214379689.00437968920101715221318661112600090021882223636146075604612424316051047461914111440337972122317426316365031135873212678971854270540996248391014254674710000000000000000000006567582255361961131322919020818876165422812821275552129112111966502212815627766176415610137711125791781008271125311922431145171430552596750181531313377905585591093137652117037699702852701139860951002810779613811902240146617393187915102428547842873025165336254071163118180145818121849121445175747678259182629773323715417285038529934674417327123756459865103579310944310261765683307115600458200138481444492179441792606332078599161341769138559213482738745405240582300934543419509281001949134524920194209015081289347019516532117893139730103463463319815891119276108714259258317863045348914123630473501236341182821525370960299167781103301216582834384842507259893360378259131574152981717120470267414748321717602822413407526199704056010077910209247109938159245621545015467118498125747438201504104249312511722561892421196071432116450317473811670226842913433720415619867753097676974528218293786852663657022488
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................201512440.0051244000002036210002000200110163157410117726111114510301311096893425414703951375696152952072688422727863867438916524895100000000000000000000779658657294419621371612202010206810160082914261511241031213131101831189323724505628641367709580301085121331186925715461014803317218489689282668924228917131587136230248898123121411863736449564606559169241016076147135111621251148832211505971103124647833956486147031652303303012102259501682181481220913773615184915157571209383163221358114459971131131744884338234952532002131811073781314551633116670827519047538753391819299786510857612619019015751188118485941301065371420947951533170447172358247402384745132818717551229289341973293373946741932728421130892752801562205164712743653187150991010133416892331931309178772761235733341560823521508456079560214441154364641277511614350425849872677583752715621586325211579712651214740
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................241299131.0029913100000030202021000000628827101114214103931543421176311101911627331402259631035812779152102490000000000000000000000014151203116341425710229169061634812990051160475563794403317331506190129191102532309211126200211011928523225227111614812117014929113527922312091076235262804030019989401181002021051360172222911821241716176824684113157320070036110424921544338668222353110111654224453269482658415491246183812551113609341789794817125533861682274812230512655600237211549343719144473961604568232815615392140352199022821691432202972802775151911929323289586320913637242011987260415697843427262042272653739200535288353921457936038604560274546972017210453963545456448521415934411140212744787976619585969911146180934434171238530748242306686181239814334070110916320201
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................221180444.0018044400001042202002000000413732340023900000002310974656771610314041554226378813715852412190000000000000000000002021941577511101712415201211101177009252034654857992016601410566700200913551524107107000292381011094429289186248417184310274209302971682505701100426287138402227238186198014510106122518664416390331302630255526948931160131493772406000001201377118530623686373112591414235258975389768495819358396293460155411005034311555619554818439511881150802053943025251210717218725336715210837312393924301300322187484108147931528754510006286562385830816211009701782270170152117425237024993184254807534145146868172378517216405214834381866870774163331057625377709982533562546022373302138181839377718492771604214695252778112308
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................231167798.00167798100035100312996102400736081115252236511088601601942039196147321491641882489342124459040430458011604333800000000000000000614940448911991485135874562339461401511211722413198470227231471562484939288241511314431026553908010538114429301011154147332222281920658236664938011786464275893373990123831178171111161175142013444255579123101422142652782841214671777114434555197831277342251181470202120010212101607725027410114651798166533306151478170364507508332483740435000010269101692615555040714301921682035915348986624443661941193442199427469313263251332852110140732933467125636352426659327774737325513679755873829613621224356321641391044944881221116730536122230589671167172281930213471388248552924903324644267131357958956971025801268248512789618724781326810270712032267128360
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................24189812.008981200000002100000000000284790001400000002578109664271331291324201720532931451700000000000000000000000197162179561407123011150125350011388187108201140171291001030150324225410103267283138021107691628511836855726101254437161010040303626192338450301010164412726311035021423522338772641242403197538460100018381971310483646152245193462201544158321180153278553385693680066135100001710039666194821293916611030292523191194617145996411194713316916963206283101554800210496371176395363301516142942741211810826252914491785522803523646557197424159482853654139018370821783046111219002891090122111361593337515804790720230425114062769
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................19171044.00710440000000000000000000017262126035905210972005067625243844127921311177251322417012730250000000000000000000000029228425612941511015691061145199112601144344423181021061325371421036599126089026162214357213011419725751032017181182115523825881170167132337235310416112001749444911541062162720169107085311674123713933118841209636462286100057019121500000292728071500123978923521633531447519763164378801250294817237544032000122623855468213223106232643514796546238112517158254616130730425815679338749025822626317620898720197621111901209578969011911011448264184129103165241396333033311740111930953628096311601690107488923205105333518869161458157496755912451031045103839887801268651103120332201814104167631
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................21158066.005806600000010000000000000536030011650200000816119966296612268329151714733555171814300000000000000000000000161143143770000000200400011000000013302000000004201020100012000061820124206103311432109788318053274248999311010036104014271975013005102623111005112781416412520322682083625112000017317012139634452239619529982272613265228439935532230040000720245139247928849516297957517245312826245352996876514852223414747416891379477240326683447403787592106371193271623546029153924457743150785334924659470323568251855333114623083336114418904302263061513188112636168541425291384121
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................22157272.00572720000100300111200000041171580056000000041872984444410931753450339349216217339253000000000000000000000036371713094511912101010002003360458111310711170182116017122081102700116141036076308248164123244643131101633533317520000003547223728314934020003140141512121908145908547751481231001971264580000010016202117103843323228840452583352611564219333694253000347433003224663181477353831224343168863782182545136244340561211088320756581241232441510464266110645394191735304241171524667514928756236415453624053251010951122781732473452801820258239510761035222226267181120460923194132963210158841527888158251810936211013320
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................23153400.005340000000000000001000000141110400012000000001313889451522151234245182964151901000000000000000000000345295298118012001220020010300001113028141233000019031001020509162110000433110129235115344355917101324316000004935765944611613100161041422211060084636801246112032024329660000054103282006289393022639529917418611411324194141880087310061212251268331026424610475727293974413719242492236715912160306241224568174086466320165444507115918924276104626324111646821745811360896766615716559167565559836820462561858645101913103832125914723152623852612628132254051055127183647111150
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................19141336.004133600000000000000000000281550014800000003198618049653388102902750492675761176547000000000000000000000004849342500000000002000010001000000000000000013000010010000001020480134327198117209169138172225200997154793900000251240231623110600240200000043182031611366630241251650000011360752051222244417630543431821773949848934821720050100942265341597484205432859114231501471726316158514755291816610313620385765334844652351426252425913014614611810344131297447222916301241175343111297541255580058404531106184193429113783051027139815689221777201891712052405263222997138084911720
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................20136949.0036949000000000000000000003348100009101000002077873772151122767361532463762547010450100000000000000000000008379893100000001103001000004000000000000000038000312000000000163470100196149905414010814415511118950867631011004991914312417609107110151106001121582243828243520517518164000001918006500213828299181357514113334247200370209138100500001953115648293128207826223376133151182125222710057631042629381402764565330115643435323192953605841068108622981715831335205238970721377677196296391015183628180500113391503598239704691261321672024542233062148137024490
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................23135175.003517500000302111111000000710600027000000071724272615162834001131735760000000000000000000000029282415120114110000111010044103193400010120560203020314200004122550147531212148164136192058103000006106791121201200815120280200092181233014212213088228100020631831104449183149621831701211521051042251041983000243923001120106224131458944161193372148714715263719198317625393177045520573662111215134013565294291082122363481153873196788820661107698816497764541655167742390403963426042418061634431478512504125650610362586156223649728
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGATC........................................................................................................................26130105.00301050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230847019000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................22126591.00265910000100001020002030026181027032131518145148230556355184927607051144037389181246824032062197000000000000000005542373419705991840171096917006181512629556098224076026020212000033412158464279619293639554847109501124420123112622812410101101427131092116012331631451152051960112721321735303572724286301212120810111442211461106957267095743971165126100521953492232431096077137000012916436106297213217701903657161266984241453340304125522693434846106329140671551175216523108472685528435366587910747949320674158952137601383114415231511015291109152861813682799209253325522665648117332176100104711066128766397203068
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................23123741.00237410000001000010000000010103100011000000006496161314747303124163587141200000000000000000000000241314801000012000001000001200002000000000012000000050614000105221008131116243227274824459172418000002215973014213201010220300005018510135155106000544500000269423001912017712662388117198159130161112146400605006033311181315336244065952180254494610262232881272441777333168520117972681862422442344501291232721371201318601118480285558998826125717258811231266192327271228740874738761142349134181294506661811041
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................21119799.00197990000010000000103140009133660948180292190320402115620151821151015111211332321425037219000000000000000007758112014109409026358004132611930432913170401521620070227020320114502012725163920134125463168855399410020112073231046250231695143724223278035346025420718292321157104310800000101501800010960372482183343402424132829284320353320000442311710141317282326013284866321054632826361578387368567950287310155261118983465124911460711156766621336532294501047820284825109222839100221351237271228380973195855643629327622799480370814616275334325552702031331011220
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................25118384.001838400000000000000000000120000000000001114127023012121182200000000000000000000000294045900003011002000010002180010414000100003100011004131200012164800326070201434622000002002211340150081509130171200212202123028810051196000004740020607251031641623471782411031694300295100110643394336101223501046902282441535158488255528811747494434925644404532833523081655584710123208373520186782119341131124711462903167991638109976116737946716012523815539814251215947576130
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................24114387.0014387000000201010000000007810002000000002025201121019351555428164011110000000000000000000000035171850000010011000000000160120201021001009302001005010901001121581801846267234416423192656321000000464318021040035070503402010071614212200264470000097420330993329470611496573489620397138110071140031061013370062442873102241243410118198042631163310127425011192071156391701532002200021427592063862710317192531333931821843813229053963155012162774340543841837899333103411942351030
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................23112604.0012604000000000000000000100030002200000000031200061001102301000000000000000000000008129600010021001000010000000345500000010045000416020180000000100211305825345212100000442211192023919090068010100800313150144527920001207410000030000000485316173429144715121557182313001520000221076331329157157126701224824422722388410115356791428191203516717142169820213691616040161598130557631285847897872133337594120569645532624266006685074574826550250580161106122514878564511220
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................18110103.001010300000000000000000000921010004209121630151210238121329403403990000000000000000000000038373320001700270020123100131411066164478201020212001402601511108927202225660000101036914190041181420164101094001022033007310945432913201221614014160216731121640009092466251022000000132915784710872411311771517838310003418124222181069302301521133232551463511478125766373374115423981711726172328412410148126737429532813466111215475364603818828014920511908111111010154122131566322
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2219220.00922000000000001000000000020000290112417000410205114300560377200000000000000000000000312722130001003100210101000216700448321000000130103020412410029311316252047018101115923608000000943878331410011001320130160900529222032111110411600010217011710017251921331541526619517572551000160000100305175132150352521401271752761724158234220456410937478402864141752539320060121801144622924888134109982937044148940113871228210104217563364253010330781885657534932
............................................................................................................TCAGGTACCTGAAGTAGCGCGATC..........................................................................................................................2417713.007713000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000064241287000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................2117035.007035000000000000000000002201001000000014327731764210302722040000000000000000000000032810000000000000000000000000013000000100100020000002000200021010169571032212965042000001855673526040020010010000002183302215400000340000031000000622219323319231830383325000200001101003611102311118068810210513763316616862558161771325455183825066544413520014510013101503645811232109921247211966294331644810412630826730610171327728152425462406810
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................2116491.0064910000110210010000000012130020000000127293100781301165130301000000000000000000000456200111000001001002000421585421001000001000100010010022011000834216122291916208225100000715109610030003021100000020021052090001068000001400010010424922872025610414325239001434002202041610544455304212915112912098281023176162051235512803830023165550477110232047323272137407411112281512211271401727140849263861732783211793652345636259126667411425170131430
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................2415186.00518600000000000000000000455000000000002605540340330231110000000000000000000000001010000100000000000000000000000001000000010000000000000001411007147781921535011010000020010000010010120000000030031701110004245000003118111820002290008102191359153600012000110100200000100000000000010110300020587416877817992834213001010000500000130113798132001141642799240431769310203313215612746143221690
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2114959.004959000010010000000000001320038000000001530301221011134600000000000000000000000019221016000000000030000010001001214000110020580000020002300023910550518101789122012517430700000235187125151101100107070202003647018221210004544000004110004101284511974251564225261343680110000010151151301211404320001454113558729101978447538077490552771738081501293021614261712152071223030768015101141032137102452275916202322391336331825124316
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................2414594.0045940000000000000000000032800000000000080123602210304701620000000000000000000000033020000100000000000000000000000000100000000000000000000003000015611181363772124010000000020001000001010001001024313225000116350000020220033000015423231319161328172700010100101000002111122020200021101202100064301622633933147219311101110015000105304112077010025551832162688116291647583363540123571202691302044975014610
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................2114151.004151000000000000000000003220001900000001212212311910261440187600000000000000000000000101002001101000000000000000013100001000000010100000310000000100010258382315112113162415000001227221636031000001000000002836016062000004000000520000009829107783396243010144007000000013143022228183724011210622338165648468141472311136734831765176959655423222223237450202717916673520233631418171351510329857913283197332350924918832349357612840
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................2013922.00392200002000000010100000231180101641452101354102241352522257520001793000000000000000002136402012811306300250010192141016237400004804600000000011000000301009650195612910135131614001104015100182001211412176818236830908292132200500000000230000001198374610717105415109156101140000231165211075294164971231120863142341713321148167162071232568426241061911781528245715162715120211634155352121033192318929341046374415219852021142211684113840299260
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................2413880.003880000010000000000031003010002000000002500012420123212300000000000000000000000078450414032111224231215910000142622131331202610301210001020301300000000000200054445313221000000000321015160141311273481082131162690202061112430030500000015200100033130423146164312546413300001005121041749122180772905317636551477451443155575110651416211182216241930242573711251337108728131723527543145991113161110961912620847354824822351424543010
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................2013700.003700000000000000000000000311002000000019222132231201203213000000000000000000000008669020101010000000010032001121020000210110000010100400010741309141014310610917103916400000301421919430100020302010002270111120000025000002500003012533512224727381568614448500900001203022357325481415102420865371391212578663574621748240261605127421101228102150346159911358098477110139211473678138785612841316165471323554356160
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................1913607.003607000000000000000000003120000300000001001021004031023011000000000000000000000001010000000010020000000020000012000100000110000000000000000000005111200810711510302000000304770000300000201020020520225144000131921700000499011200171071455180000000010000000230100000000102001020110123315001330618782414041148188824114000213010102442339003251736360541325248011057451084638218
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................1813539.00353900000000000000000000152000700000000111111914977738101310987000000000000000000000007263000000000121000000000000000000000000010100000000000430000605848211022013402618161010820000017102310000010002020000000012119148000001240000015000000285117617344390411002819000000002001138743245681670403123781129123214416788397381914325816977371836852305262127165221169510141317848888491264274197432360915253511331916181457050
............................................................................................................TCAGGTACCTGAAGTAGCGCATC...........................................................................................................................2313493.00349300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507984000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................2013123.0031230000000000000000000022000010000000001010001000301101100000000000000000000000000100000000000000000000000001000000000000000000000100000001230001300653352000000002063001101000001000000001901200000010040000033004406765175611004200100000000000000011211003101100019130504041322861494451441810113115416030001501190079226202393811913617141342117118261725381227919142361320
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................2312836.002836000000000000000000000210000000000002010000300000210000000000000000000000000001000000200000000000000100000120000300001301020100121000000000016200200402000000000304303100300110000000001501536154100070495000004100000011103630711442920600892000101125174330232332301603236151345782410251146326103218091244150101121791991216190531632361322312223291542221041068871241874947678662115152160
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2212637.00263700000000000000000000010000800000001071121010014271211000000000000000000000001618151000000000000000000001100000000000000010000000000000000020200031701321011116000100111005004000001160203000015703211025054000000171001100261117258186374214220002000000010100111300103101026412014290119947635173181383114241603101160001400623105419231261942227019565265710550681513296204119457282313611
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................1912565.00256500000000000000000000040000100000000010000000000010100000000000000000000000001121000500001000000000000000010020000000000000010001000001030201020041350503000000018713210001000001010000302000201010000070000020000300200111031200000000000000001010000000000100100000302030031113261142830127201282893124020110200010232100800124514515710139981611504152146213241
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................2212564.002564000000000000000000001101000900000004180402119303010203603641001000000000000000000000533421000000000200010000202002000010010138070303060912000200011058331141052012100000006622125501000700020510213306235100000040000011000000341461162174287960030000630801561127341111540002213031113171813451111271161069813569784187025322130005499271218261924121148135043092738322646323312102671211866280
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................2512562.0025620000000000000000000000000000000000111200000011000000100000000000000000000000523200000000000000000000100000000000000001000000010110000021000211701101170000000000000002100005403100400001305417100012400000017201500020041100273341551711005181600000010013121000002000030111021500020993411424146239400700013151001000216337271319214135433714122961840861577488146474533679581257031979522
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................2012554.00255400000000100000000000010101600000001464130001114020006179100000000000000000000000032210000000001000000000000001000000000000101010101000002130004207771161523400100000020021102030011010003100000421120000032000000300110010003424122111458000359001001103411123241110410400141468444529582635203041938941621116020323105783101011002113081537103153361664018191132726221175136
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................2412331.0023310000000000000000000000000000000000001002103190102026540500000000000000000000000694200000000000000000001400003000000000011000101030150000004040021111020220040000001301003203004004011013400020211000000000300000810001101111541135243145511004000000020041101002202001117000222210113315054163281561916407202740002010213436605375301017141810015104325701186973512318819171735916741400
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................1812292.0022920000000000000000000061300000000000001220000310202210500000000000000000000000011100300610000110210000010010319001200000010000000000100000000001115117114141713916605000000640400010000210100050021140051379600030111780000023140210071011169790000000000010000330000020000000000000000100141720114885714932011320792341021021120003001723244401333425263402885110201582103031133
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTATC.......................................................................................................................2712134.00213400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................2512029.002029000000000000000000000000000000000012200201000000000010000000000000000000000032320000000000000000000000000000000000101000000100010000043300035483312101130000000000005130200100401020000005062200001230000026110202100012300411641227524000142000002001001021100023000010011015000481492514622177117610200200012000122516405611160104580931719212574113336539446981592429341091
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................2611873.0018730000000000000000000000100000000000001000000010100020000000000000000000000000363038100000000000200000000000001120000000000000000001021000015110001110000201830200000000000011031012130102000000413014100011900000081000000001660041343917615100101000001007190010020120001323019336100418746731321062092010100118001262222517110156098281122333811408163104150116171822104207173830
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................2011794.0017940000000000000000000000400070000000116220010132200131210000000000000000000000005440000010000000000000000000000000000000130001000004400450000129640122341410000000057038116020016161321903500571610000021000000100000030021868191310164101012100000011244334128940203024245513620158441646827104952533220023105355030191303184222140216812483452327544624304347863132713308177421000
...............................................................CGCGCTAATCAGTGACCGGGGCTA.......................................................................................................................................................................2411648.00164800002001100000000000200000000000000411031112012211020000000000000000000000000102121008110151026310010413201410201070000000000000000000000000010205594178880000000010023016312212625419000103403210011060000080202000100116301020117120010000000101504111000000010550012100422027138491592016619127416013111200080572150794612110385221311720616492919174103158106918121810
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2211569.0015690000000000000000000012100021600000022024032302300021100000000000000000000000301100000003101001010000300001150000001000100000000002000000000000000254571541305000000001506303220322622460100182133200000800000200000007601824611629551091800000000100021892124203411302122279124713651482092732122143172104144101020271883322815412133240185226802821746568337153065102106171023140
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................1811380.0013800000000000000000000021000000000000000001100001001300000000000000000000000000110000000000000000000000000000000000000000000000000000010000100168022465241032000001007090001000000000000051600110000010220000003001200120118240001000000010000001101310000002024021311123630150512175610609527290122040111141035029271303197107033302363200012141102030
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA........................................................................................................................2611343.001343000000000000000000000000000000000000101200000101100000000000000000000000000013120000000000000000000000000000000000000000000000010000000216000002213100040000000000000000000110200000000000702250002426000007301201002006000100164400000000000010101001000000000021100010110026110211142817010104013000000200030006232101408122501031530107272626201224315122025443083021230
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................2311274.001274000000000000000000000000000000000001000010100001100010000000000000000000000012010100000000000000000000000000010100100000000000010000000010004602207121000000000000000000000000000000000200412200000500000022003000000500255106276510000000200000000010202003000031011120300019551860136701801000311301501011337717264100530344212127411307142847714402827276933102150
..............................................................................................................AGGTACCTGAAGTAGCGCGT............................................................................................................................2011268.001268000000000000000000000200009000000061201000211112210010000000000000000000000011300000000010100000000000000000000000000000000000000000000000001020034383530070000020880001000010000001000070330530001051000000000000002948402249241374000000000003113121111480061101312054569113281511877115652221740800022022122211412223901183414383213373754292331621201317142229830190
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................2411195.00119500000000000000000000000000000000000132030010000224211000000000000000000000003100000600000000000100000000000000000000000000000001000000201102104411110100000000000400000000000000010000001000103000000500000720000000016510851169982800001000000110000001000001000110000000110012103219413941810100202000090000031424384211021634849216150241231147418371835614210
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................2611185.00118500000000000000000000100000000000000622230200120000000000000000000000000000002100000000000000000000000000000000000000000000000000100000400100216080312000000000000000010000000010200000000000060000100000002511203014000410061050135231800000000000000000000000000000000000010100028132281152313523000000000060000617152610130013596181210112020256825671593100200
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................2511148.001148000000000000000000000000000000000000000000110000001010000000000000000000000010983000000000000000000000000000000000000100000010111100000001200220313100101000000030000303000000010002000000010010000002000004000000000073000101661472610021796600000000001000100010000100010122010010361257836866011010210100000034711133112611162952468203382763232142131652254615190
...............................................................CGCGCTAATCAGTGACCGGGGT.........................................................................................................................................................................2211109.0011090000000000000001000000020000000000010200002000000032000000000000000000000000000000001100020000001000210024110000001000000000000001000000000002101013301603100000010010031203452173548113360200110000000105000000400000002190181212011301000000002003015533913220210010524810013182224011104031376121361612301127315033121124114721374115424781315184346017131761752887130
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................2611075.001075000000000000000000000000000000000003010100100000200000000000000000000000000015010002010000000000000000000000000000101000000000010000001001001280102010000000000000000100000320201030000006112700003100000086100100000110124102113920001000000000000010100000000000000000100035135281173216285000000001020002002718321200035742110611214540131088371662332977
..............................................................................................................AGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2211029.00102900000000000000000000000000000000002221111000000020110000000000000000000000002221000000000000000000000000000000000000000000000000000000000000810201102301000000001101001000000101010100003111122321100000000300000000014100254014930000010000000010101000100000001010013011004226437121491126100002101080001103216162303141961031232172341016631424834612210
droSim2
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CT-CCATCTCCGCC----------------------------ATATAAATAAGC----------------------------------CAA-------------SizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................231523254.005232541962992622251009457410417543983277651615910511158551164333612491
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................211197740.0019774027041413072957012267631424294962448810410477818195512766240
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................221158428.001584282236199111453669002297130227266982056816046274114218157393415130
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................24196723.009672318332912100201252134917782102651115699988157992622
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................24141193.0041193113320810094379531873152434066443463284204
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................22121916.0021916213671950026093755288620255261227169018000
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................22116931.00169311122221410028614140466230332631574051213001
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................2017111.007111125112756580096013011068946100435210336010037
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................2316572.00657202060082841414113546302000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................2516086.006086041100503465183941563884425001
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................2614599.00459901000043312015201574328002
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................2313868.003868300190060171864239211631816528002
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................2412578.002578234700586614443284837416129000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................2512128.002128001100339397694373221180120000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................2412061.00206100380016123159747019752144000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2311811.00181110016001081132910845562879004
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2311526.00152617715465569724429013183218322334210
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA........................................................................................................................2611473.00147300000015420648128643175164000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................2611294.00129400530017121335218510029659000
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1911022.0010221161177008277891481631214235106
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................251767.0076711200016114461513045298000
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................181677.006775901620797432274080117007
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................221584.0058410013800203323131201581576023
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211474.004740007002222131327494866000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.......................................................................................................................271470.00470000100667314794726713000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................251467.00467000000232621114263316001
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................221409.0040910272199303014913842901060
..................................................................................................................ACCTGAAGTAGCGCGCG...........................................................................................................................171341.0034100000041436912176000000
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201334.003344201700491962422335000
.................................................................................................................TACCTGAAGTAGCGCGCG...........................................................................................................................181326.0032600000081831082034000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................231323.0032300010091133506285000
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................211319.0031926020210613892442018204
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231282.00282430000505930203355226000
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191279.002790111010155619834413000
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................211270.002700021000354543452851343001
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAT........................................................................................................................261245.0024500000023010028211000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................241244.0024463930060565113601522000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................231242.002420003002849784161432000
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................211240.002408521310746551613514000100
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................201239.00239310163002154731039100
............................................................................................................TCAGGTACCTGAAGTAGCGCGTTA..........................................................................................................................241221.002210001001110004213000
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................191208.002080000000130204000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA.........................................................................................................................251205.002050001001521663840555000
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................201203.002034105385318499716102000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA........................................................................................................................261199.0019900000035323236145000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGATT........................................................................................................................261176.0017600000074000011154000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTAA.......................................................................................................................271166.0016600010019164724013523000
..................................................................................................................ACCTGAAGTAGCGCGC............................................................................................................................161165.001650000001163154000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAT...........................................................................................................................231151.00151000000111374505106000
...............................................................................................................GGTACCTGAAGTAGCGCG.............................................................................................................................181151.001510002000000148100000
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................201150.001500000000000150000000
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................211138.00138000320091171321360000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................241138.00138001400111655401055000
...............................................................CGCGCTAATCAGTGACCG.............................................................................................................................................................................181137.00137251011464800004000110
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................181136.0013601200061319194000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................241135.0013501110014212346829000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTAA..........................................................................................................................241131.00131000000714202030463000
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................221123.0012311241150071292551418000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAT........................................................................................................................261122.0012200000010862001086000
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211116.00116002100121231111851410000
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................191110.001106106364435242000010
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................191103.00103000000176584000000
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................24199.0099182011100764264414110
...................................................................................................................CCTGAAGTAGCGCGCG...........................................................................................................................16198.0098000000715101452000000
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20197.0097010000212231184000
..................................................................................................................ACCTGAAGTAGCGCG.............................................................................................................................15192.0092000000559469000000
...................................................................................................................CCTGAAGTAGCGCGC............................................................................................................................15180.00800000002351555000000
............................................................................................................TCAGGTACCTGAAGTAGCGCAA............................................................................................................................22178.00780001007635211034000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC.........................................................................................................................25174.00740021002596310198000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................23171.007100150032521901220002
................................................................................................................GTACCTGAAGTAGCGCG.............................................................................................................................17170.0070000000113164000000
............................................................................................................TCAGGTACCTGAAGTAGCGCCG............................................................................................................................22169.006900000061077102018000
..................................................................................................................ACCTGAAGTAGCGCGCGT..........................................................................................................................18165.00650001005833612000000
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20165.00650000001115111430011000
.................................................................................................................TACCTGAAGTAGCGCGCGA..........................................................................................................................19162.006200000013123421000000
...............................................................CGCGCTAATCAGTGACCGGGGCC........................................................................................................................................................................23161.006128201300000000000000
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22161.00610000005548250410000
.................................................................................................................TACCTGAAGTAGCGCGC............................................................................................................................17158.0058000000206446000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGATA........................................................................................................................26158.00580020000231101336000
.................................................................................................................TACCTGAAGTAGCGCG.............................................................................................................................16157.005700000010715619000000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22157.005700000024331401417000
....................................................................................................................CTGAAGTAGCGCGCG...........................................................................................................................15153.00530000003861323000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTTA.......................................................................................................................27153.0053000000100000250000
.....................................................................................................................TGAAGTAGCGCGCGT..........................................................................................................................15152.00520000001552480000000
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22251.50103020500250000089000
...............................................................................................................GGTACCTGAAGTAGCGC..............................................................................................................................17150.0050000000000050000000
..................................................................................................................ACCTGAAGTAGCGCGCGA..........................................................................................................................18149.00490000001072147000000
.................................................................................................................TACCTGAAGTAGCGCGCGT..........................................................................................................................19147.00470000001082333000000
...............................................................CGCGCTAATCAGTGACCGGGGCTA.......................................................................................................................................................................24146.0046011000211928066000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23143.0043000100000138012000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC.........................................................................................................................25143.004300000088951066000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGACA........................................................................................................................26139.0039003000671200182000
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................19139.0039120340001010000000
..............................................................................................................AGGTACCTGAAGTAGCGCGCGA..........................................................................................................................22139.00390000004510413012000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................24138.00380000005341040120000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGCA.........................................................................................................................25137.0037000100015420168000
droSec2
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT-CT-CCATCTCCGTC----------------------------ATATAAATAAGC----------------------------------CAA-------------SizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23199746.009974629487207872129428178
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22180599.00805993864121846101539959
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21154138.00541381679318088114247833
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2418103.0081032527192819291719
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................2017493.00749326673081988757
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2213672.00367212591437545431
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................2412766.0027668781127297464
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2212449.0024499651049307128
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2312332.002332647396921368
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2112092.0020922036241715
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2211561.0015611484172436
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2311407.00140772633879264
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251996.0099623134556364
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................201834.008348098710
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................191760.007604251529093
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................231690.00690148140240162
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................221528.005281537770228
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211506.005069471160181
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................241408.00408210971487
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231382.00382961711699
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201347.003471081047164
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231329.00329142794068
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................241317.00317155486549
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191264.00264376610358
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................211219.0021992492157
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................211212.002121791779
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................181166.001662706178
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191152.00152149102
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................241140.0014017472452
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211134.001349818810
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................261123.001234252722
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................231116.00116112112
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................251108.001089392535
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23191.0091116677
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................21191.00913032209
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................25186.008620361218
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................20183.008347111015
...............................................................CGCGCTAATCAGTGACCGGGGT.........................................................................................................................................................................22173.00732326519
...............................................................CGCGCTAATCAGTGACCGGGGCTTT......................................................................................................................................................................25162.0062421019
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................23161.0061183553
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................21156.005653300
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................25155.00551228114
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................22154.005444424
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20151.0051163032
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................21148.004848000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23147.004745200
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA........................................................................................................................26145.0045421911
............................................................................................................TCAGGTACCTGAAGTAGCGCGTTA..........................................................................................................................24145.004553028
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................24141.004130542
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................19139.003930117
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20139.0039151833
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22138.0038123167
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22138.003836101
...............................................................CGCGCTAATCAGTGACCGGGGCTA.......................................................................................................................................................................24136.0036141354
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................24134.0034610126
............................................................................................................TCAGGTACCTGAAGTAGCGCGCCA..........................................................................................................................24129.002911954
............................................................................................................TCAGGTACCTGAAGTAGCCG..............................................................................................................................20129.002925301
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18128.002811656
............................................................................................................TCAGGTACCTGAAGTAGCGCCG............................................................................................................................22127.002727000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAT...........................................................................................................................23127.0027101232
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26127.00279891
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19126.002616361
............................................................................................................TCAGGTACCTGAAGTAGCGCTA............................................................................................................................22125.0025111103
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23124.002424000
...............................................................CGCGCTAATCAGTGACCGGGGA.........................................................................................................................................................................22123.002341414
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18123.002323000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAT........................................................................................................................26122.002231234
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................24119.001919000
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22219.003829603
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGATT........................................................................................................................26119.00199712
............................................................................................................TCAGGTACCTGAAGTAGCCGC.............................................................................................................................21318.6756371054
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20118.001811250
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGCT.........................................................................................................................25118.001811115
............................................................................................................TCAGGTACCTGAAGTAGCGCGTAA..........................................................................................................................24118.001841040
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................22117.00179332
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................24117.001731220
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................19116.00166271
...............................................................CGCGCTAATCAGTGACCGGGT..........................................................................................................................................................................21115.00156810
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18114.00148330
.................................................................................................................TACCTGAAGTAGCGCGCG...........................................................................................................................18113.00138023
droYak3
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-CCAACTCCACG---------------A----T-------ATATAAATAAGC----------------------------------CAA-------------SizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22179339.007933916223457535433107572813054517123654
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21141991.0041991451369218135375640579550661025134
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23139366.003936631324310105407612133462436511628793
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................2018506.008506202816318220611124617442029150
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2413438.0034381381803901348142454222267
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2112426.002426323734111330010
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2212282.0022824124043148471014071030
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2311690.001690131111310718538514000043
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2211631.001631016021900210016
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1911282.00128218101591134751831170
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................201927.0092708784800100000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................241903.0090333477275300040011037
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................221840.00840033136868106570000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................231774.007740380339758320120
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231303.0030313525910160000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................241300.00300105922810020000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................231241.002410140601025230010
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211214.0021402196102130000
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191207.002070201500010000
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................221202.00202491081673730009
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201175.0017511119744390000
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................181159.0015903613010180102457
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................221134.0013413110404030000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................231132.0013201032000000027
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251132.0013216533100241007
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231124.0012405511238450000
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211121.001211853834170000
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191119.00119040143434240000
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................211102.00102259111512100020
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................21185.0085081400000000
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................22180.0080078101000000
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................24171.0071847303130006
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................21162.006201921410170000
...............................................................CGCGCTAATCAGTGACCGGGGCC........................................................................................................................................................................23160.00602213700000000
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................21160.00600173011380000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................24154.00542815511010003
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18150.0050050000000000
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................20144.00440122002370000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23132.0032032000000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................24132.00321151200040000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................24130.0030023410020000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................26129.0029018600030020
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................19128.0028022101210010
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................25127.0027018720000000
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................21127.0027027000000000
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23125.0025025000000000
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................20124.0024017011210020
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26124.00240131000010000
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19124.0024017200130001
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................24123.0023023000000000
............................................................................................................TCAGGTACCTGAAGTA..................................................................................................................................16119.0019000000000613
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22118.0018018000000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC.........................................................................................................................25116.0016011500000000
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22116.0016010100140000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.......................................................................................................................27116.0016001000000015
................................................................................................................GTACCTGAAGTAGCGCGC............................................................................................................................18115.0015012110010000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................25115.001506300060000
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18114.001405101160000
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23114.001406310220000
...............................................................CGCGCTAATCAGTGACCGGGGCTA.......................................................................................................................................................................24113.0013012000010000
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20113.0013013000000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................25113.001325500010000
................................................................................................................GTACCTGAAGTAGCGCGCG...........................................................................................................................19112.001208100020001
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22211.002217700160000
.............................................................................................................CAGGTACCTGAAGTAGCGCGCA...........................................................................................................................22110.0010010000000000
............................................................................................................TCAGGTACCTGAAGTAG.................................................................................................................................17110.0010000000000100
...........................................................................................................GTCAGGTACCTGAAGTAGCGCG.............................................................................................................................22110.0010010000000000
droEre2
--------------------------------------------------GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-----TTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT-CT-CCATCTCCACC----------------------------ATATAAATAAGACAAATGCTCGCAGGCGAGTCCTCGAAAGAA--------------------SizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
............................................................................................................TCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................23197996.009799647037942237735113111274126766
............................................................................................................TCAGGTACCTGAAGTAGCGCGC............................................................................................................................22192078.00920786693323651574608131237192283
............................................................................................................TCAGGTACCTGAAGTAGCGCG.............................................................................................................................21190851.009085147090130514391511268801255076
............................................................................................................TCAGGTACCTGAAGTAGCGC..............................................................................................................................20112090.0012090507426915174549993390
............................................................................................................TCAGGTACCTGAAGTAGCGCGT............................................................................................................................2216679.0066792802338720339630338
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................2414977.00497720194512737498291205
............................................................................................................TCAGGTACCTGAAGTAGCG...............................................................................................................................1913876.003876152514702189635910
.............................................................................................................CAGGTACCTGAAGTAGCGCGC............................................................................................................................2113782.003782375072011120
.............................................................................................................CAGGTACCTGAAGTAGCGCG.............................................................................................................................2012614.002614257340118180
...............................................................CGCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................2312610.002610640457647780553469
.............................................................................................................CAGGTACCTGAAGTAGCGCGCG...........................................................................................................................2212512.0025122400230174941
............................................................................................................TCAGGTACCTGAAGTAGCGCGA............................................................................................................................2211792.0017921315351231345531
............................................................................................................TCAGGTACCTGAAGTAGCGCGCT...........................................................................................................................2311570.0015707911130311955957
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................241994.00994437248513898284
............................................................................................................TCAGGTACCTGAAGTAGCGCGCA...........................................................................................................................231820.00820302151391243489
............................................................................................................TCAGGTACCTGAAGTAGCGCT.............................................................................................................................211513.0051342720521580
............................................................................................................TCAGGTACCTGAAGTAGCGCGCC...........................................................................................................................231509.0050911714551431638
...............................................................CGCGCTAATCAGTGACCGGGGC.........................................................................................................................................................................221495.00495100147927193145
..............................................................................................................AGGTACCTGAAGTAGCGCGCG...........................................................................................................................211388.003881191221322130
...............................................................CGCGCTAATCAGTGACCGGGG..........................................................................................................................................................................211337.003371262142631300
............................................................................................................TCAGGTACCTGAAGTAGC................................................................................................................................181314.003141056001816817
............................................................................................................TCAGGTACCTGAAGTAGCGCGTT...........................................................................................................................231300.00300134090120370
.............................................................................................................CAGGTACCTGAAGTAGCGC..............................................................................................................................191285.00285282000300
..............................................................................................................AGGTACCTGAAGTAGCGCG.............................................................................................................................191253.0025395081065750
..............................................................................................................AGGTACCTGAAGTAGCGCGC............................................................................................................................201239.00239159110128400
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGC..........................................................................................................................241219.00219119104191858
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT.........................................................................................................................251214.002148716036786
............................................................................................................TCAGGTACCTGAAGTAGCGCC.............................................................................................................................211202.0020215192717160
............................................................................................................TCAGGTACCTGAAGTAGCGT..............................................................................................................................201165.001656625079130
...............................................................CGCGCTAATCAGTGACCGGGGCTT.......................................................................................................................................................................241151.0015159031312334
...............................................................CGCGCTAATCAGTGACCGGG...........................................................................................................................................................................201148.001486407029480
.............................................................................................................CAGGTACCTGAAGTAGCGCGT............................................................................................................................211148.00148148000000
............................................................................................................TCAGGTACCTGAAGTAGCGCA.............................................................................................................................211136.00136711035290
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGT..........................................................................................................................23193.009390010020
...............................................................CGCGCTAATCAGTGACCGG............................................................................................................................................................................19186.0086630001760
.............................................................................................................CAGGTACCTGAAGTAGCG...............................................................................................................................18186.008684000110
............................................................................................................TCAGGTACCTGAAGTAGCCG..............................................................................................................................20163.006354000630
.............................................................................................................CAGGTACCTGAAGTAGCGCGA............................................................................................................................21163.006363000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCAA..........................................................................................................................24160.006047100660
.............................................................................................................CAGGTACCTGAAGTAGCGCGCGA..........................................................................................................................23159.0059280000229
............................................................................................................TCAGGTACCTGAAGTAGCGCGTA...........................................................................................................................23154.0054180202770
............................................................................................................TCAGGTACCTGAAGTAGCGCCG............................................................................................................................22154.005447000250
................................................................GCGCTAATCAGTGACCGGGGCT........................................................................................................................................................................22153.005345000530
.............................................................................................................CAGGTACCTGAAGTAGCGCGCT...........................................................................................................................22153.005353000000
...............................................................CGCGCTAATCAGTGACCGGGGT.........................................................................................................................................................................22151.0051702016917
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGC............................................................................................................................23143.004343000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGG..........................................................................................................................24142.004229000328
...............................................................................................................GGTACCTGAAGTAGCGCGCG...........................................................................................................................20139.0039151002615
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA.........................................................................................................................25138.0038900051113
..............................................................................................................AGGTACCTGAAGTAGCGC..............................................................................................................................18137.0037180001180
............................................................................................................TCAGGTACCTGAAGTAGCGCGG............................................................................................................................22135.003529000510
............................................................................................................TCAGGTACCTGAAGTAGCCGC.............................................................................................................................21234.5069550101030
............................................................................................................TCAGGTACCTGAAGTAGCGA..............................................................................................................................20134.0034120001750
............................................................................................................TCAGGTACCTGAAGTAGCGCGAA...........................................................................................................................23133.0033180101400
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT........................................................................................................................26131.003126000320
............................................................................................................TCAGGTACCTGAAGTAGCGCGCTA..........................................................................................................................24130.003017000580
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT.........................................................................................................................25127.002730003120
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA........................................................................................................................26124.002419200300
...........................................................................................................GTCAGGTACCTGAAGTAGCGCGCG...........................................................................................................................24124.002424000000
............................................................................................................TCAGGTACCTGAAGTAGCGCGAAA..........................................................................................................................24123.002315000800
............................................................................................................TCAGGTACCTGAAGTAGCGTT.............................................................................................................................21122.002270001230
............................................................................................................TCAGGTACCTGAAGTA..................................................................................................................................16122.002200000022
...............................................................CGCGCTAATCAGTGACCGGGGCA........................................................................................................................................................................23121.002120100810
............................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA.........................................................................................................................25121.00217000437
...........................................................................................................GTCAGGTACCTGAAGTAGCGCG.............................................................................................................................22121.002121000000
...............................................................................................................GGTACCTGAAGTAGCGCGC............................................................................................................................19121.002118000120
............................................................................................................TCAGGTACCTGAAGTAGCGCTT............................................................................................................................22220.0040270001210
.............................................................................................................CAGGTACCTGAAGTAGCGCGCA...........................................................................................................................22120.002018100100
...............................................................CGCGCTAATCAGTGACCGGGGCTA.......................................................................................................................................................................24117.00174000229
............................................................................................................TCAGGTACCTGAAGTAGCGCGTTA..........................................................................................................................24117.001750001110
...............................................................CGCGCTAATCAGTGACCGGGGCTTT......................................................................................................................................................................25117.00179000530
..............................................................................................................AGGTACCTGAAGTAGCGCGT............................................................................................................................20116.00169000430
..............................................................................................................AGGTACCTGAAGTAGCGCGCGT..........................................................................................................................22116.001620101120
...............................................................CGCGCTAATCAGTGACCGGGGA.........................................................................................................................................................................22116.00163000850
............................................................................................................TCAGGTACCTGAAGTAGCT...............................................................................................................................19116.00167010620

Generated: 10/20/2015 at 07:39 PM