ID:

dwi-mir-219

 Coordinate:

scf2_1100000004768:2086488-2086584 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.6 -28.5 -28.5

Flybase annnotation

pre_miRNA [Dwil\mir-219-RM]; utr5 [utr5_plus_8436]; miRNA [Dwil\miR-219-RA]

No Repeatable elements found

Sense Strand Reads

AATAAAAAAACAAAAAGAAAAAAAGTATGATAGAAAACAAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTTCAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACACCCAATAACCAAAGTGAAACATTGTAAATATTCATTTAATTTGTAATAA

*****************************************************(((.(((((.((((.((((.(((((...((((((((((...(((...)))...))))))))))...))))))))).)))).)))))..))).**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 M020

head

 V119

head

 V118

embryo

 V117

male body
....................................................................TGATTGTCCAAACGCAATTCTTG.......................................................................................................... 23 0 1 486.00 486 378 45 48 14 1
....................................................................TGATTGTCCAAACGCAATTCT............................................................................................................ 21 0 1 351.00 351 269 55 27 0 0
....................................................................TGATTGTCCAAACGCAATTC............................................................................................................. 20 0 1 263.00 263 78 169 14 1 1
............................................................................................................AGGGTTGCATCTGGGCATCGCG................................................................... 22 0 1 176.00 176 2 18 41 113 2
....................................................................TGATTGTCCAAACGCAATTCTT........................................................................................................... 22 0 1 88.00 88 68 7 12 1 0
....................................................................TGATTGTCCAAACGCAATT.............................................................................................................. 19 0 1 28.00 28 19 3 6 0 0
.....................................................................GATTGTCCAAACGCAATTCTTG.......................................................................................................... 22 0 1 25.00 25 25 0 0 0 0
............................................................................................................AGGGTTGCATCTGGGCATCGC.................................................................... 21 0 1 21.00 21 0 1 4 15 1
....................................................................TTATTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 19.00 19 1 17 1 0 0
.....................................................................GATTGTCCAAACGCAATTCT............................................................................................................ 20 0 1 16.00 16 16 0 0 0 0
...........................................................................................................AAGGGTTGCATCTGGGCATCGC.................................................................... 22 0 1 12.00 12 0 4 3 5 0
......................................................................ATTGTCCAAACGCAATTCTTG.......................................................................................................... 21 0 1 10.00 10 6 3 1 0 0
....................................................................TGATTGTCCAAACGCAATTCTTGT......................................................................................................... 24 0 1 7.00 7 1 0 5 1 0
.....................................................................TGATGTCCAAACGCAATTCTTG.......................................................................................................... 22 3 1 5.00 5 0 3 2 0 0
.....................................................................GATTGTCCAAACGCAATTC............................................................................................................. 19 0 1 5.00 5 5 0 0 0 0
.......................................................................TTGTCCAAACGCAATTCTTG.......................................................................................................... 20 0 1 4.00 4 0 2 2 0 0
............................................................................................................AGGGTTGCATCTGGGCATCG..................................................................... 20 0 1 4.00 4 1 2 1 0 0
.........................................................................GTCCAAACGCAATTCTTG.......................................................................................................... 18 0 1 4.00 4 1 2 1 0 0
........................................................................TGTCCAAACGCAATTCTTG.......................................................................................................... 19 0 1 4.00 4 1 1 2 0 0
............................................................................................................AGGGTTGCATCTGGGCATC...................................................................... 19 0 1 4.00 4 0 0 4 0 0
.....................................................................TATTGTCCAAACGCAATTCTTG.......................................................................................................... 22 1 1 3.00 3 1 2 0 0 0
...................................................................CTGATTGTCCAAACGCAATTCT............................................................................................................ 22 1 1 2.00 2 2 0 0 0 0
...................................................................GTGATTGTCCAAACGCAATTCTTG.......................................................................................................... 24 1 1 2.00 2 2 0 0 0 0
...................................................................TTGATTGTCCAAACGCAATTCTTG.......................................................................................................... 24 1 1 2.00 2 2 0 0 0 0
............................................................................................................AGGGCTGCATCTGGGCATCGCG................................................................... 22 1 1 2.00 2 0 0 0 2 0
....................................................................TGACTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 2.00 2 0 0 2 0 0
....................................................................TGTTTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCC............................................................................................................ 21 1 1 2.00 2 0 2 0 0 0
............................................................................................................AGGGTTGCATATGGGCATCGCG................................................................... 22 1 1 2.00 2 0 0 2 0 0
......................................................................ATTGTCCAAACGCAATTCT............................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
....................................................................TGATTGTCCAAACGCATTTCT............................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
....................................................................TGATTTTCCAAAAGCAATTCTT........................................................................................................... 22 2 1 1.00 1 0 1 0 0 0
.....................................................................GATTGTCCTAACGCAATTCT............................................................................................................ 20 1 1 1.00 1 1 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTT............................................................................................................. 20 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCAAACGCAAT............................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
....................................................................TGATTTTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
....................................................................TGATTTTCCAAACGCAATTCT............................................................................................................ 21 1 1 1.00 1 0 1 0 0 0
....................................................................TAATTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCAAATGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
....................................................................AGATTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
....................................................................TGATTTTCCAAACGCAATTCTT........................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCAAATGCAATTC............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0
....................................................................CGATTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCAGACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 0 1 0
....................................................................TTATTGTCCAAACGCAATTC............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0
....................................................................TGATTGTCCAAACGCAATTCG............................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGGCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
.....................................................................TATTGTCCAAACGCAATTCT............................................................................................................ 20 1 1 1.00 1 1 0 0 0 0
....................................................................TGATTGTCCAAGCGCAATTCT............................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
............................................................................................................AGGTTTGCATCTGGGCATCGCG................................................................... 22 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGGGTTGCATCTGGGCATAGCG................................................................... 22 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCAAACGTAATTCTT........................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
...................................................................TTGATTGTCCAAACGCAATTCT............................................................................................................ 22 1 1 1.00 1 1 0 0 0 0
............................................................................................................AGGGTTGCATCTGGGCATCGCT................................................................... 22 1 1 1.00 1 0 1 0 0 0
.....................................................................GATTGTCCAAACGCAATTCTC........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
....................................................................TTATTGTCCAAACGCAATTCT............................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
...................................................................CTGATTGTCCAAACGCAATTCTTG.......................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
....................................................................TGATTGTCCAAACGCACTTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 0 1 0
............................................................................................................AGGGTTGCGACTGGGCATCGC.................................................................... 21 2 1 1.00 1 0 0 1 0 0
...................................................................ATGATTGTCCAAACGCAATTCT............................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.....................................................................GATTGTCCAAACGCAATT.............................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
............................................................................................................AGGGTTGCGACTGGGCATCGCG................................................................... 22 2 1 1.00 1 0 0 0 1 0
............................................................................................................AGGGTTGCGTCTGGGCATCGCG................................................................... 22 1 1 1.00 1 0 1 0 0 0
....................................................................TGATTGTACAAACGCAATTCT............................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGGGTTGCCTCTGGGCATCGCG................................................................... 22 1 1 1.00 1 0 0 1 0 0
.............................................................................................................GGGTTGCATCTGGGCATCGCG................................................................... 21 0 1 1.00 1 0 0 0 1 0
.......................................................................TTGTCCAAACGAAATTCTTG.......................................................................................................... 20 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGTGTTGCATCTGGGCATAGCG................................................................... 22 2 1 1.00 1 0 0 1 0 0
............................................................................................................ACGGATGCATCTGGGCATCGCG................................................................... 22 2 1 1.00 1 0 0 0 1 0
....................................................................TGATTGTCCAAGCGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTTGG......................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
....................................................................TCATTGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
............................................................................................................AGGGGTGCATCTGGGCATCGCG................................................................... 22 1 1 1.00 1 0 0 0 1 0
......................................................................ATTGTCCAAACGCAATTCTT........................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
....................................................................TGATTGTCCAAACGTAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
....................................................................TGATATTCCAAACGCAATTCTTG.......................................................................................................... 23 2 1 1.00 1 0 1 0 0 0
....................................................................TGATTGTCCAAACTCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
....................................................................TGACTGTCCAAACGCAATTCTT........................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
....................................................................TGATTGTCCAAACCCAATTC............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0
............................................................................................................AGGGTTGCATCTGGACATCGCG................................................................... 22 1 1 1.00 1 0 0 0 1 0
............................................................................................................AGGGTTGCATCTGGGCACCGCG................................................................... 22 1 1 1.00 1 0 0 0 1 0
....................................................................TGATTGTCCAAACGCAATTCA............................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCAAACGCAATTA............................................................................................................. 20 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGGGTTTCATCTGGGCATCGCG................................................................... 22 1 1 1.00 1 0 0 0 1 0
............................................................................................................AGGGTTGAATCTGGGCATCGCG................................................................... 22 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGGGTTGCATCTGGGCATCGCGT.................................................................. 23 1 1 1.00 1 0 0 0 1 0
....................................................................TGATTGTCCAAACGCAATTCTCG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
....................................................................TGATTGTCCACACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
..............................................................................................................GGTTGCATCTGGGCATCGCG................................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................................................................GGTTGTCCAAACGCAATTCTTG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
....................................................................TGATGGTCCAAACGCAATTC............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
....................................................................CGATTGTCCAAACGCAATTCT............................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGGGTTGCATCTTGGCATCGCG................................................................... 22 1 1 1.00 1 0 0 0 1 0
............................................................................................................AGGGTTGCATCTGGGAATCGCG................................................................... 22 1 1 1.00 1 0 0 1 0 0
...................................................................ATGATTGTCCAAACGCAATTCTTG.......................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
....................................................................TGATCGTCCAAACGCAATTCTTG.......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
............................................................................................................AGGGTTGCATCTGGGCCTCGCG................................................................... 22 1 1 1.00 1 0 0 0 1 0
....................................................................TGATTGTAAAAACGCAATTCTTG.......................................................................................................... 23 2 1 1.00 1 0 0 1 0 0
.....................................................................CCTTGTCCAAACGCAATTCTT........................................................................................................... 21 2 2 0.50 1 1 0 0 0 0
.........................................................................TTCCAAACGCAATTCTTG.......................................................................................................... 18 1 3 0.33 1 0 0 0 1 0
....................................................................TGATTGTCCAAACGCATTC.............................................................................................................. 19 2 8 0.25 2 0 0 2 0 0
..................................................................................CACTTATTGTTGATTTCAAA............................................................................................... 20 2 4 0.25 1 1 0 0 0 0
.........................................................................GTCCGACCGCTATTCTTGT......................................................................................................... 19 3 10 0.10 1 1 0 0 0 0
..................AAAAAAGTATGATACAACA................................................................................................................................................................ 19 2 20 0.05 1 0 0 0 1 0
.....................................................................TGATGTCCAAACGCAATTCT............................................................................................................ 20 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

TTATTTTTTTGTTTTTCTTTTTTTCATACTATCTTTTGTTTTATAAACCAATTAAGCTAAAAATCGATACTAACAGGTTTGCGTTAAGAACAACTAAAGTTTATGAGTTCCCAACGTAGACCCGTAGCGCCGAGCTTTATTCTTATGTGGGTTATTGGTTTCACTTTGTAACATTTATAAGTAAATTAAACATTATT

****************************************************(((.(((((.((((.((((.(((((...((((((((((...(((...)))...))))))))))...))))))))).)))).)))))..))).***************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004768:2086438-2086634 + dwi-mir-219 Known_mirbase AATAAAAAAACAAAAAGAAAAAAAGTAT-GATA------GAAAACA---AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACA-CCCAATAACCAAAG-T------GAAACATTGTAAATATTCA-------------------------------TTTAATT-------TGTA------------ATAA
droVir3 scaffold_13049:5991417-5991538 - dvi-mir-219 Known_mirbase -------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATGAGAATCCAACCCA-CAACCAAA---------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:4316893-4317026 - dmo-mir-219 Known_mirbase ---------------------------------------A-ATACAAACATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTTTTAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATCCAACACAA-AGCCAAAAT-------------------------------------------------------------------------------------------
droGri2 scaffold_15110:13121819-13121957 + dgr-mir-219 Known_mirbase -------------------------------------------------AAACATTTGGTGAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAAAACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATACAACACAAAAATCAAA-ACACATTT----------------------------------------------------------------TGTA------------TTCA
dp5 XR_group6:9338072-9338225 - dps-mir-219 Known_mirbase ---------------------------------------CA--------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCAGCAACCAAAA-TCTAATTTAAACGTACTCAATATCCA-------------------------------AT--------------------------------
droPer2 scaffold_35:387457-387627 + dpe-mir-219 Known_mirbase ---------------------------------------CA--------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCATCAACCAAAA-TCTAATTTAAGCGTACTCAATATCCAATATCCTAAA---------------------------T-------CCAA------------GTAA
droAna3 scaffold_13337:8265328-8265451 + dan-mir-219 Known_mirbase ---------------------------------------TGAAAAACAAAATATTTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACGAA------------------------------------------------------------------------------------------------------
droBip1 scf7180000396541:409870-410024 + T--------------------------------------GAAAAACAAAATATTTTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACAAAGAAAACCAT--------TTAAACAT----------------------------------GTATATTCCC--------T----------------------TA
droKik1 scf7180000302474:640180-640298 + ---------------------------------------------------ATACTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAT-T-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACGACTCGGCAACCAA----------------------------------------------------------------------------------------------
droFic1 scf7180000454107:825212-825333 + -------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAA----------------------------------------------------------------------------------------------
droEle1 scf7180000490993:219014-219174 + CA----------AGATGGAAAAAGCTATCGCTGCGGAGCGAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAA----------------------------------------------------------------------------------------------
droRho1 scf7180000780124:81254-81429 + ---------------------------------------GAAAATAAATATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAAA-TCA------------------------------TCAATAAA--GTGCTT----------------TATAAA-TAAAACGATACTGTTGACAA
droBia1 scf7180000302428:6673842-6673979 + ---------------------------------------AA-----AATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA-TCG------------------------------TGAA----------------------------------------------------TCA
droTak1 scf7180000415815:374368-374522 - -------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAAA-TCT------------------------------TAAACCCA--GTGCAT----------------TATAGATTGGA------------ATAA
droEug1 scf7180000409711:25977-26131 - ---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAGCCAAA-TCA------------------------------TCATTGAA--GTGCAT----------------TGT----------------------AA
dm3 chr3L:17308085-17308217 + dme-mir-219 Known_mirbase ---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------
droSim2 3l:16883564-16883696 + dsi-mir-219 Known_mirbase ---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------
droSec2 scaffold_0:9359458-9359590 + dse-mir-219 Known_mirbase ---------------------------------------GAAAATAAATAAATATTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------
droYak3 3L:16762575-16762716 - dya-mir-219 Known_mirbase AA------------------------------GCGAAGCGAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------
droEre2 scaffold_4784:16541272-16541437 - der-mir-219 Known_mirbase ---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA-TCA------------------------------CCACTAAAGT------GTACATT----T----TAT----TGAAAC-----------GAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AATAAAAAAACAAAAAGAAAAAAAGTAT-GATA------GAAAACA---AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACA-CCCAATAACCAAAG-T------GAAACATTGTAAATATTCA-------------------------------TTTAATT-------TGTA------------ATAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231486.004864537811448
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211351.00351552690027
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................201263.00263169781114
.......................................................................................................................AGGGTTGCATCTGGGCATCGCG.............................................................................................................................221176.00176182211341
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................22188.00887680112
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19128.0028319006
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22125.0025025000
.......................................................................................................................AGGGTTGCATCTGGGCATCGC..............................................................................................................................21121.0021101154
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20116.0016016000
......................................................................................................................AAGGGTTGCATCTGGGCATCGC..............................................................................................................................22112.001240053
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................21110.001036001
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2417.00701015
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1915.00505000
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2014.00420002
.......................................................................................................................AGGGTTGCATCTGGGCATCG...............................................................................................................................2014.00421001
...................................................................................GTCCAAACGCAATTCTTG.....................................................................................................................................................................1814.00421001
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1914.00411002
.......................................................................................................................AGGGTTGCATCTGGGCATC................................................................................................................................1914.00400004
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................2112.00220000
................................................................................ATTGTCCAAACGCAATTCT.......................................................................................................................................................................1911.00101000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................2011.00100001
..............................................................................TGATTGTCCAAACGCAAT..........................................................................................................................................................................1811.00110000
..............................................................................TGATTGTCCAAACGCAATTCG.......................................................................................................................................................................2111.00100001
.......................................................................................................................AGGGTTGCATCTGGGCATCGCT.............................................................................................................................2211.00110000
...............................................................................GATTGTCCAAACGCAATTCTC......................................................................................................................................................................2111.00101000
.............................................................................ATGATTGTCCAAACGCAATTCT.......................................................................................................................................................................2211.00101000
...............................................................................GATTGTCCAAACGCAATT.........................................................................................................................................................................1811.00101000
........................................................................................................................GGGTTGCATCTGGGCATCGCG.............................................................................................................................2111.00100010
..............................................................................TGATTGTCCAAACGCAATTCTTGG....................................................................................................................................................................2411.00101000
................................................................................ATTGTCCAAACGCAATTCTT......................................................................................................................................................................2011.00101000
..............................................................................TGATTGTCCAAACGCAATTCA.......................................................................................................................................................................2111.00100001
..............................................................................TGATTGTCCAAACGCAATTA........................................................................................................................................................................2011.00100001
.......................................................................................................................AGGGTTGCATCTGGGCATCGCGT............................................................................................................................2311.00100010
.........................................................................................................................GGTTGCATCTGGGCATCGCG.............................................................................................................................2011.00101000
.............................................................................ATGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2411.00101000
droVir3
-------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATGAGAATCCAACCCA-CAACCAAA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2311947.00194706841800000000002671195615955660142187010002247000011000000000000000000010313100001004000000000
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................2111553.001553114393200000000002621138315989600202152000000000000000000000000000000000011017000000003000001000
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221857.00857021671000000000016472416658440117109000001102000000000000000000000000000012000000000000000000
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................201216.00216450821000000000018126426091100000000000000000000000000000000000004000000007000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................221126.00126251190000000000111147211880000000000000000000000000000000000121720500000000000010000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................24187.00870020000000000022103966091600000000000000000000000000000000000004000000000000000000
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22161.006101590000000000010000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19143.004301170000000000056031102100000000000000000000000000000000000006000000000000000000
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20120.002000200000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................21117.001700160000000000000001000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................23116.00160020000000000040002105200000000000000000000000000000000000000000000000000000000
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1917.0070021000000000021010000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTCCAAACGCAATTCTT......................................................................................................................................................................1816.0060010000000000001120000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATC................................................................................................................................1916.0060600000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1914.0040130000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................2213.0031001000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................ATTGTCCAAACGCAATTCT.......................................................................................................................................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGA....................................................................................................................................................................2413.0030000000000000020000001000000000000000000000000000000000000000000000000000000000
.............................................................................ATGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2413.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCG.......................................................................................................................................................................2112.0020000000000000001000000000000000000000000000000000000000000001000000000000000000
.................................................................................TTGTCCAAACGCAATTCT.......................................................................................................................................................................1812.0020000000000000010001000000000000000000000000000000000000000000000000000000000000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGG............................................................................................................................2312.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................ATTGTCCAAACGCAATTCTT......................................................................................................................................................................2012.0020010000000000000100000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGC....................................................................................................................................................................2411.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTC......................................................................................................................................................................2211.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGTT...................................................................................................................................................................2511.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCC.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTA......................................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGA............................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GTCCAAACGCAATTCTTG.....................................................................................................................................................................1811.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGG....................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTG......................................................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TT-CAAATACTCAAGGGTT.............................................................................................................................................1811.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTA.....................................................................................................................................................................2311.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAAT..........................................................................................................................................................................1811.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATA.........................................................................................................................................................................1911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCG...............................................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................................GATTGTCCAAACGCAATTCTG......................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCA.......................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................ATGATTGTCCAAACGCAATT.........................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTCCAAACGCAATTCTTC.....................................................................................................................................................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTTA....................................................................................................................................................................2411.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGAAA..................................................................................................................................................................2611.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2011.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGC............................................................................................................................2311.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGTTC..................................................................................................................................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................AAGGGTTGCGACTGGGCATC................................................................................................................................2011.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................ATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.............................................................................ATGATTGTCCAAACGCAATTCTT......................................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
---------------------------------------A-ATACAAACATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTTTTAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATCCAACACAA-AGCCAAAAT-------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231999.0099993402628110
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211488.004884351192751
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221193.00193176041030
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................201110.001109707510
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22168.00686800000
.......................................................................................................................AGGGTTGCATCTGGGCATCGCG.............................................................................................................................22162.00629967301
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19122.00221802200
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20120.00202000000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................24112.0012312420
.......................................................................................................................AGGGTTGCATCTGGGCATCGC..............................................................................................................................2118.008013040
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2118.008800000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2117.007700000
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................2115.005000050
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2014.004400000
..............................................................................TGATTGTCCAAACGCAATTCTTGC....................................................................................................................................................................2413.003100020
..............................................................................TGATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................2313.003200100
................................................................................ATTGTCCAAACGCAATTCTT......................................................................................................................................................................2013.003300000
.............................................................................ATGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2413.003300000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................2012.002200000
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1912.002200000
..............................................................................TGATTGTCCAAACGCAATTCTG......................................................................................................................................................................2212.002200000
.......................................................................................................................AGGGTTGCATCTGGGCATCGCGT............................................................................................................................2311.001000010
................................................................................ATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2211.001100000
....................................................................................TCCAAACGCAATTCTTGT....................................................................................................................................................................1811.001000100
.............................................................................ATGATTGTCCAAACGCAATTCTT......................................................................................................................................................................2311.001100000
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1911.001100000
.......................................................................................................................AGGGTTGCATCTGGGCATCGCGC............................................................................................................................2311.001000010
.......................................................................................................................AGGGTTGCATCTGGGCATCG...............................................................................................................................2011.001000100
...............................................................................GATTGTCCAAACGCAATTCTTGG....................................................................................................................................................................2311.001100000
...............................................................................GATTGTCCAAACGCAATT.........................................................................................................................................................................1811.001100000
...................................................................................GTCCAAACGCAATTCTTG.....................................................................................................................................................................1811.001100000
..............................................................................TGATTGTCCAAACGCAATTCTTGGCA..................................................................................................................................................................2611.001100000
..............................................................................TGATTGTCCAAACGCAATTCTTGGG...................................................................................................................................................................2511.001100000
droGri2
-------------------------------------------------AAACATTTGGTGAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAAAACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATACAACACAAAAATCAAA-ACACATTT----------------------------------------------------------------TGTA------------TTCASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................23193.0093930
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................21140.0040400
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22110.0010100
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................2217.00770
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................2016.00660
.......................................................................................................................AGGGTTGCATCTGGGCATCGCG.............................................................................................................................2213.00303
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................1912.00220
...............................................................................GATTGTCCAAACGCAATTCTA......................................................................................................................................................................2111.00110
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1911.00110
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2111.00110
..............................................................................TGATTGTCCAAACGCAATTCTTGG....................................................................................................................................................................2411.00110
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................2011.00110
dp5
---------------------------------------CA--------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCAGCAACCAAAA-TCTAATTTAAACGTACTCAATATCCA-------------------------------AT--------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231894.0089408427224130024
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211493.00493031421630120020
.......................................................................................................................AGGGTTGTGACTGGACATCGCG.............................................................................................................................221185.001851171732018304102
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221169.001690127035070000
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................201138.00138097133070000
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22160.006006000000000
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................21131.003100130000000
.......................................................................................................................AGGGTTGTGACTGGACATCGC..............................................................................................................................21123.002300404300012
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20118.001801800000000
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19116.001601105000000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................24113.00130504040000
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2118.0080800000000
......................................................................................................................AAGGGTTGTGACTGGACATCGC..............................................................................................................................2218.0080020300003
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1916.0060600000000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................2014.0040301000000
.......................................................................................................................AGGGTTGTGACTGGACATCGCGT............................................................................................................................2313.0030010101000
........................................................................................................................GGGTTGTGACTGGACATCGCG.............................................................................................................................2113.0030300000000
..............................................................................TGATTGTCCAAACGCAATTCTTGC....................................................................................................................................................................2413.0030003000000
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1913.0030200100000
..............................................................................TGATTGTCCAAACGCAATTCTC......................................................................................................................................................................2213.0030003000000
.................................................................................TTGTCCAAACGCAATTCTT......................................................................................................................................................................1912.0020101000000
.......................................................................................................................AGGGTTGTGACTGGACATCG...............................................................................................................................2012.0020100010000
...............................................................................GATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2311.0010100000000
.......................................................................................................................AGGGTTGTGACTGGACATC................................................................................................................................1911.0010010000000
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2011.0010100000000
..............................................................................TGATTGTCCAAACGCAATTCA.......................................................................................................................................................................2111.0010100000000
.............................................................................ATGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2411.0010100000000
.......................................................................................................................AGGGTTGTGACTGGACATCGCGG............................................................................................................................2311.0010000000001
...............................................................................GATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................2211.0010100000000
.......................................................................................................................AGGGTTGTGACTGGACATCGCC.............................................................................................................................2211.0010000010000
..............................................................................TGATTGTCCAAACGCAATTCTCC.....................................................................................................................................................................2311.0010010000000
................................................................................ATTGTCCAAACGCAATTCT.......................................................................................................................................................................1911.0010001000000
..............................................................................TGATTGTCCAAACGCAATTCTTGTA...................................................................................................................................................................2511.0010100000000
.................................................................................TTGTCCAAACGCAATTCT.......................................................................................................................................................................1811.0010001000000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2111.0010100000000
..............................................................................TGATTGTCCAAACGCAATTCTTGA....................................................................................................................................................................2411.0010100000000
droPer2
---------------------------------------CA--------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCATCAACCAAAA-TCTAATTTAAGCGTACTCAATATCCAATATCCTAAA---------------------------T-------CCAA------------GTAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231191.001912148120200
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................21196.009606509220
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................22164.006404604140
.......................................................................................................................AGGGTTGTGACTGGACATCGCG.............................................................................................................................22163.0063162414243
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................20118.00180100260
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2419.009030150
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2219.009090000
.......................................................................................................................AGGGTTGTGACTGGACATCGC..............................................................................................................................2117.007001330
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................1917.007040120
......................................................................................................................AAGGGTTGTGACTGGACATCGC..............................................................................................................................2215.005300020
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1914.004022000
...................................................................................GTCCAAACGCAATTCTTG.....................................................................................................................................................................1813.003300000
.......................................................................................................................AGGGTTGTGACTGGACATC................................................................................................................................1912.002100100
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................2012.002020000
..............................................................................TGATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................2312.002010100
.......................................................................................................................AGGGTTGTGACTGGACATCGCT.............................................................................................................................2212.002000020
.............................................................................ATGATTGTCCAAACGCAATTCT.......................................................................................................................................................................2211.001010000
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2111.001010000
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1911.001010000
..............................................................................TGATTGTCCAAACGCAATTCTTC.....................................................................................................................................................................2311.001000010
..................................................................................................................ACTCAAGGGTTGTGACTGGA....................................................................................................................................2011.001000010
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2011.001000100
droAna3
---------------------------------------TGAAAAACAAAATATTTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACGAA------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231162.001621172015226
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211114.00114674013129
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................22186.008681016259
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................20154.00543140739
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................22141.004123104112
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19112.0012200118
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................24111.0011100406
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2216.006600000
.......................................................................................................................AGGGTTGCGACTGGGCATCGC..............................................................................................................................2116.006210003
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................2014.004400000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................2214.004010003
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1914.004300001
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2113.003300000
.......................................................................................................................AGGGTTGCGACTGGGCATCG...............................................................................................................................2012.002200000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................2012.002100001
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2112.002200000
..............................................................................TGATTGTCCAAACGCAATTCTTGA....................................................................................................................................................................2411.001100000
.......................................................................................................................AGGGTTGCGACTGGGCATC................................................................................................................................1911.001010000
..............................................................................TGATTGTCCAAACGCAATTCTC......................................................................................................................................................................2211.001010000
..............................................................................TGATTGTCCAAACGCAATTCTTTG....................................................................................................................................................................2411.001100000
..............................................................................TGATTGTCCAAACGCAATTCTG......................................................................................................................................................................2211.001100000
........................................................................................................................GGGTTGCGACTGGGCATCGCG.............................................................................................................................2111.001100000
..............................................................................TGATTGTCCAAACGCAATTCTTGG....................................................................................................................................................................2411.001100000
droBip1
T--------------------------------------GAAAAACAAAATATTTTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACAAAGAAAACCAT--------TTAAACAT----------------------------------GTATATTCCC--------T----------------------TASizeHit CountTotal NormTotal
No Reads
droKik1
---------------------------------------------------ATACTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAT-T-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACGACTCGGCAACCAA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CA----------AGATGGAAAAAGCTATCGCTGCGGAGCGAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------GAAAATAAATATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAAA-TCA------------------------------TCAATAAA--GTGCTT----------------TATAAA-TAAAACGATACTGTTGACAASizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------AA-----AATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA-TCG------------------------------TGAA----------------------------------------------------TCASizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAAA-TCT------------------------------TAAACCCA--GTGCAT----------------TATAGATTGGA------------ATAASizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAGCCAAA-TCA------------------------------TCATTGAA--GTGCAT----------------TGT----------------------AASizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................21126557.0026557000012660012241020019000100002283896411945500000000000000000000003000000000000000000023343539017700027133846281307641497414929873840190231816101481129366842214020918069947486538000000000000000000000000000000000000196822460116723563129940101631246133123500000017930000000000000000000000000000000000100070000000010016000010160500000500000000000000000000000000008101130001000000010110000000000000000012301000000062
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................23119837.00198370000230010102004103900001000301131552341245027270000000000100000000000310000000000000000000000462702517200046109311154827146196727001016196180240133111160461568138959339248000000000000000000001000000000000000110010890712783653826961672460123441588701630000013890000000000000000000000000000031000000040000000014150120000380500000310000000000000000000000000000118020101000000030341000000000000000114210110000024
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................2218633.00863300003310101001010002000000004143550862922000000000000000000000012100000000000000000010099100200000216711335914531026975100090711411202250104802011111224681861670000000000000000000000000000000000007926360594241896903554815303247710000005290000000000000000000000000000000000000020000000000002000012010000060000000000000000000000000000333150030010000200000000000000000000200000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................2211753.001753000000010300000000000000000100000000000000001000000000000000000000000000000000000110011000020243012147180000000011000019413041406036000000000013300000000000000000000000201401201322111702602840000011500000000010000000000000000000000000001200000000286101350000913060000012000000000000000030000010000086874671133622410020000331434200001000000000001129120191516000000
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................201872.00872000021000000001001000000000075104911200000000000000000000000000000000000000000000101300020000006001832000111710000000000000510001300248111200000000000000000000000000000000000022380102041076110821030400000350000000000000000000000000000001000000000000000001000000041200000000000000000000000000000000000021140000010000000000000000000000000400000000000
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................191587.0058700000000000000000000000000011462523120000000000000000000000100000000000000000000000110000000007001001000041000001000100001210001000201114110000000000000000000000000000000000003050017111725726175526280000047000000000000000000000000000000000000000000000000000100001203000003000000000000000000000000000010020000010000000000000000000000000200000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................241325.00325000011000100000000000000000010413512000000000000000000000010000000000000000000000000000000000200200000020000000010000010000100010081300000000000000000000000000000000000026200170053804231301600000015000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000021010010000000000000000000000000000000000000000
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................221283.0028300000000000000000000000000001226280000000000000000000000000000000000000000000000001000000000000030000009000000000000000000000006155000000000000000000000000000000000000232107305342292712530000033000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................201142.001420000000000000000000000000000008140100000000000000000000000000000000000000000000000000000000000010000002000000000000004000000003112000000000000000000000000000000000000161403004160801301900000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................231111.00111000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010030000001000000000000101000000003121321000000000000000000000000000000000000870300140601000000004000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCG.......................................................................................................................................................................21184.008400001000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000100200000000000000000000000000000000000002020002000280401000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................21169.0069000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002011000000000000000000000000000000000000143013001130206060000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGT............................................................................................................................23153.0053000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000003000000000000001000001000000000000000000000000000000000000000000100000010000053000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000044450210000000001100000000000000001911000000000
..............................................................................TGATTGTCCAAACGCAAT..........................................................................................................................................................................18144.0044000000000000000000000000000160204100000000000000000000000000000000000000000000000000000000010021000004000000100000000000000000100000000000000000000000000000000000000000021000280020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000120000000000000000000000000000000100000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGA....................................................................................................................................................................24143.00430000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000050000000000000010000000010010000000000000000000000000000000000002603000004040200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011
..............................................................................TGATTGTCCAAACGCAATTCA.......................................................................................................................................................................21141.00410000200000000000000000000000000000000000000000000000000000000000000000000000000050000000000120000000001000400000000001000000000000000000000000000000000000000000000000230200100001060000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................21141.0041000030000002000000000000000000000000000000000000000000000000000000000000000000000000000010040020000007000000000000001000000001000000000000000000000000000000000000000210200210201050000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................21132.0032000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000000000000000000000230211051305110000002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTA.....................................................................................................................................................................23132.0032000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000010010000001000000000000000000000000020000000000000000000000000000000000000110200141401140000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTC......................................................................................................................................................................22130.00300000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000003003001002000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015
.......................................................................................................................AGGGTTGCGACTGGGCATCGC..............................................................................................................................21127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110000000000000000010003000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001200000000001000001000000000000000000100000000000100300000000000100000000000000000521000000000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................22127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000100000000000000001100000000000000000000000000000000000000000000020100511000000101000000000000000000900000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGATC..........................................................................................................................25124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................20123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000003000000000000001000000000000000000000000000000000000000000000000030000050302010000002000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTC.....................................................................................................................................................................23118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000400400210001001000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................ATGATTGTCCAAACGCAATTCT.......................................................................................................................................................................22116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000020100018000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................19115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010040000000000000000000000000000001002000000000000000000000000000000000000000000010102020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTCTG......................................................................................................................................................................22114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000200000000000000000000000000000000000000000000000000110000000105020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000002001000000000000000000000000000000000000110100030200010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................2112637.0026372991204394217901200007000
..............................................................................TGATTGTCCAAACGCAAT..........................................................................................................................................................................1811679.0016798000127154400000000000
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................2011631.0016311010293113554300000000000
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231733.00733120417755845401000211000
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221336.003362300212227000000000000
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................191104.001042200057700000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................22179.007923025000010002811000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................24141.00410000113000000000000
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................20119.0019171100000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGC..............................................................................................................................21115.001590500000000100000
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22115.001500025800000000000
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20114.0014000001400000000000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................21113.0013111010000000000000
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1918.00830000500000000000
.......................................................................................................................AGGGTTGCGACTGGGCATC................................................................................................................................1917.00750200000000000000
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1917.00700000700000000000
...................................................................................GTCCAAACGCAATTCTTG.....................................................................................................................................................................1816.00650100000000000000
..................................................................................TGTCCAAACGCAATTCTT......................................................................................................................................................................1816.00600000600000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGA............................................................................................................................2315.00550000000000000000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................2214.00430100000000000000
.............................................................................ATGATTGTCCAAACGCAAT..........................................................................................................................................................................1914.00400000400000000000
.................................................................................TTGTCCAAACGCAATTCTT......................................................................................................................................................................1912.00200002000000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGTT...................................................................................................................................................................2512.00200000200000000000
................................................................................ATTGTCCAAACGCAATTC........................................................................................................................................................................1812.00210000100000000000
..............................................................................TGATTGTCCAAACGCA............................................................................................................................................................................1612.00200000000020000000
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................2112.00220000000000000000
..............................................................................TGATTGTCCAAACGCAATTCG.......................................................................................................................................................................2112.00220000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCG...............................................................................................................................2012.00220000000000000000
................................................................................ATTGTCCAAACGCAATTCT.......................................................................................................................................................................1911.00110000000000000000
...............................................................................GATTGTCCAAACGCAATT.........................................................................................................................................................................1811.00100000100000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGC....................................................................................................................................................................2411.00100010000000000000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................2011.00110000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGC............................................................................................................................2311.00110000000000000000
...............................................................................GATTGTCCAAACGCA............................................................................................................................................................................1511.00100000001000000000
..............................................................................TGATTGTCCAAACGCAATTCTG......................................................................................................................................................................2211.00100010000000000000
..................................................................................TGTCCAAACGCAATTCTTGT....................................................................................................................................................................2011.00100000100000000000
..............................................................................TGATTGTCCAAACGCAATTTG.......................................................................................................................................................................2111.00100010000000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGT............................................................................................................................2311.00100000000000100000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGG............................................................................................................................2311.00110000000000000000
.......................................................................................................................AGGGTTGCGACTGGGCAT.................................................................................................................................1811.00100000100000000000
..............................................................................TGATTGTCCAAACGC.............................................................................................................................................................................1511.00100000000001000000
............................................................................TATGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2511.00100010000000000000
......................................................TTTGGTTAATTCGAT.....................................................................................................................................................................................................1520.50100000000010000000
droSec2
---------------------------------------GAAAATAAATAAATATTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211353.003533223028
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231298.002982710423
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................221135.001355157243
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221121.001211063012
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................20130.003026004
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22114.001414000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................22114.001400122
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19113.001330010
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................2017.0077000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGT............................................................................................................................2316.0060051
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGA............................................................................................................................2313.0030012
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2013.0030003
.......................................................................................................................AGGGTTGCGACTGGGCATCGC..............................................................................................................................2113.0030012
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2112.0022000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2412.0020002
.................................................................................TTGTCCAAACGCAATTCTTGA....................................................................................................................................................................2111.0010001
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1911.0010001
..............................................................................TGATTGTCCAAACGCAATTCTA......................................................................................................................................................................2211.0011000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2111.0011000
.................................................................................TTGTCCAAACGCAATTCT.......................................................................................................................................................................1811.0011000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCT.............................................................................................................................2211.0010001
................................................................................ATTGTCCAAACGCAATTCT.......................................................................................................................................................................1911.0010001
.........................................................................................................................GGTTGCGACTGGGCATCGCG.............................................................................................................................2011.0010001
..............................................................................TGATTGTCCAAACGCAATTCG.......................................................................................................................................................................2111.0011000
................................................................................ATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................2111.0011000
................................................................................ATTGTCCAAACGCAATTC........................................................................................................................................................................1811.0011000
droYak3
AA------------------------------GCGAAGCGAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................231987.009871192521271650000
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211240.0024015204607800000
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221162.001621149404400000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................221153.0015314124821163650010
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................20179.00792250002320000
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22158.0058058000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGC..............................................................................................................................21119.0019601120000000
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19113.001309100200010
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20110.0010010000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2419.00903001410000
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2119.00909000000000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................2218.00830320000000
..................................................................................TGTCCAAACGCAATTCTTG.....................................................................................................................................................................1916.00606000000000
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2115.00505000000000
.......................................................................................................................AGGGTTGCGACTGGGCATC................................................................................................................................1915.00550000000000
..............................................................................TGATTGTCCAAACGCAATTCC.......................................................................................................................................................................2114.00420200000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGT............................................................................................................................2313.00300110100000
.......................................................................................................................AGGGTTGCGACTGGGCATCG...............................................................................................................................2013.00310200000000
.............................................................................ATGATTGTCCAAACGCAATTCT.......................................................................................................................................................................2213.00303000000000
...................................................................................GTCCAAACGCAATTCTTG.....................................................................................................................................................................1812.00211000000000
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2011.00101000000000
...............................................................................GATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2311.00100010000000
..............................................................................TGATTGTCCAAACGCAATTT........................................................................................................................................................................2011.00100001000000
..............................................................................TGATTGTCCAAACGCAAA..........................................................................................................................................................................1811.00110000000000
.............................................................................ATGATTGTCCAAACGCAATTCTT......................................................................................................................................................................2311.00101000000000
..........................................................................................................................GTTGCGACTGGGCATCGCG.............................................................................................................................1911.00110000000000
..............................................................................TGATTGTCCAAACGCAATTCTC......................................................................................................................................................................2211.00101000000000
..............................................................................TGATTGTCCAAACGCAATTCTGC.....................................................................................................................................................................2311.00101000000000
..............................................................................TGATTGTCCAAACGCAATTCTTGA....................................................................................................................................................................2411.00101000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGT..............................................................................................................................2111.00100100000000
..............................................................................TGATTGTCCAAACGCAATTCTTGC....................................................................................................................................................................2411.00101000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGA............................................................................................................................2311.00110000000000
..............................................................................TGATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................2311.00101000000000
.............................................................................ATGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2411.00101000000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGTT...........................................................................................................................2411.00110000000000
.......................................................................................................................AGGGTTGCGACTGGGCAC.................................................................................................................................1811.00100100000000
..............................................................................TGATTGTCCAAACGCAAAA.........................................................................................................................................................................1940.25101000000000
droEre2
---------------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAA-TCA------------------------------CCACTAAAGT------GTACATT----T----TAT----TGAAAC-----------GAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..............................................................................TGATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2311017.00101794471410510
..............................................................................TGATTGTCCAAACGCAATTCT.......................................................................................................................................................................211333.00333252513003924
.......................................................................................................................AGGGTTGCGACTGGGCATCGCG.............................................................................................................................221199.00199802211131450
..............................................................................TGATTGTCCAAACGCAATTCTT......................................................................................................................................................................221155.001551281200240
...............................................................................GATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................22144.004444000000
..............................................................................TGATTGTCCAAACGCAATTC........................................................................................................................................................................20141.004130210080
..............................................................................TGATTGTCCAAACGCAATT.........................................................................................................................................................................19112.00128000040
...............................................................................GATTGTCCAAACGCAATTCT.......................................................................................................................................................................20110.001010000000
...............................................................................GATTGTCCAAACGCAATTCTT......................................................................................................................................................................2119.0099000000
......................................................................................................................AAGGGTTGCGACTGGGCATCGC..............................................................................................................................2219.0090001260
.................................................................................TTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2018.0082000060
.......................................................................................................................AGGGTTGCGACTGGGCATCGC..............................................................................................................................2117.0070310030
................................................................................ATTGTCCAAACGCAATTCTTG.....................................................................................................................................................................2117.0077000000
..............................................................................TGATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2415.0051020020
.......................................................................................................................AGGGTTGCGACTGGGCATCGCGT............................................................................................................................2314.0040001120
..............................................................................TGATTGTCCAAACGCAATTCTTGA....................................................................................................................................................................2413.0033000000
................................................................................ATTGTCCAAACGCAATTCTTGT....................................................................................................................................................................2213.0031000020
..............................................................................TGATTGTCCAAACGCAATTCTTA.....................................................................................................................................................................2313.0032000010
..............................................................................TGATTGTCCAAACGCAATTCTTT.....................................................................................................................................................................2312.0021000010
...............................................................................GATTGTCCAAACGCAATTC........................................................................................................................................................................1911.0011000000
..............................................................................TGATTGTCCAAACGCAATTCTG......................................................................................................................................................................2211.0011000000
..............................................................................TGATTGTCCAAACGCAATTCG.......................................................................................................................................................................2111.0011000000
.......................................................................................................................AGGGTTGCGACTGGGCATCGCT.............................................................................................................................2211.0010000010
..............................................................................TGATTGTCCAAACGCAATTCTTGAA...................................................................................................................................................................2511.0011000000
.............................................................................ATGATTGTCCAAACGCAATTCT.......................................................................................................................................................................2211.0011000000
..............................................................................TGATTGTCCAAACGCAATTCA.......................................................................................................................................................................2111.0011000000
..............................................................................TGATTGTCCAAACGCAATTCTA......................................................................................................................................................................2211.0011000000
..............................................................................TGATTGTCCAAACGCAATTCTTGG....................................................................................................................................................................2411.0011000000
.......................................................................................................................AGGGTTGCGACTGGGCATCG...............................................................................................................................2011.0010000010

Generated: 10/20/2015 at 07:41 PM