ID:

dwi-mir-12

Coordinate:

scf2_1100000004515:1592757-1592830 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intron

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.4 -39.5

Flybase annnotation

intron [Dwil\GK19863-in]; pre_miRNA [Dwil\mir-12-RM]; utr5 [utr5_plus_15222]; miRNA [Dwil\miR-12-RA]

No Repeatable elements found

Sense Strand Reads

TGGAGATTCTCTCGAGCGGCTCCATCGAACACAGCCGCTGGCAGCGCCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACTGCATGTCCACACCATCCTGATCATCATCATCGT

*****************************************..(((((((((((((..(((((.((((.((((((((((((............)).)))))))))))))).)))))..)))))))).))..))).***************************************
Read size # Mismatch Hit Count Total Norm Total M045

female body

V118

embryo

M020

head

V119

head

V117

male body
........................................................TGAGTATTACATCAGGTACTGGT............................................................................................... 23 0 1 65841.00 65841 24930 36321 1055 1981 1554
........................................................TGAGTATTACATCAGGTACTGG................................................................................................ 22 0 1 32130.00 32130 27444 3351 454 643 238
........................................................TGAGTATTACATCAGGTACTG................................................................................................. 21 0 1 10613.00 10613 7916 1518 797 243 139
........................................................TGAGTATTACATCAGGTACT.................................................................................................. 20 0 1 4320.00 4320 3458 181 510 159 12
.........................................................GAGTATTACATCAGGTACTGG................................................................................................ 21 0 1 2201.00 2201 2196 5 0 0 0
.........................................................GAGTATTACATCAGGTACTGGT............................................................................................... 22 0 1 1951.00 1951 1908 33 2 4 4
........................................................TGAGTATTACATCAGGTACTGGTT.............................................................................................. 24 1 1 1292.00 1292 929 239 61 37 26
........................................................TGAGTATTACATCAGGTACTGT................................................................................................ 22 1 1 1232.00 1232 196 26 998 3 9
.........................................................GAGTATTACATCAGGTACTG................................................................................................. 20 0 1 641.00 641 634 1 6 0 0
........................................................TGAGTATTACATCAGGTAC................................................................................................... 19 0 1 531.00 531 201 6 316 8 0
........................................................TGAGTATTACATCAGGTACTGGTC.............................................................................................. 24 1 1 439.00 439 307 41 30 57 4
........................................................TGAGTATTACATCAGGTACTGGTA.............................................................................................. 24 1 1 432.00 432 296 127 2 5 2
........................................................TGAGTATTACATCAGGTACTGGTG.............................................................................................. 24 0 1 292.00 292 149 112 19 11 1
.........................................................GAGTATTACATCAGGTACT.................................................................................................. 19 0 1 202.00 202 202 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGGC............................................................................................... 23 1 1 194.00 194 37 83 62 9 3
.............................................................ATTACATCAGGTACTGGT............................................................................................... 18 0 1 177.00 177 97 68 6 1 5
........................................................TGAGTATTACATCAGGTACTGGA............................................................................................... 23 1 1 172.00 172 122 16 19 7 8
..................................................................................................CAGTACTTATGTCATACTACGC...................................................... 22 0 1 150.00 150 101 42 3 3 1
........................................................TGAGTATTACAGCAGGTACTGG................................................................................................ 22 1 1 140.00 140 139 1 0 0 0
........................................................TGAGTATTACAGCAGGTACTGGT............................................................................................... 23 1 1 134.00 134 134 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGC................................................................................................ 22 1 1 132.00 132 7 3 120 1 1
..........................................................AGTATTACATCAGGTACTGGT............................................................................................... 21 0 1 131.00 131 124 3 2 1 1
........................................................TGAGTATTACATCAGGCACTGGT............................................................................................... 23 1 1 123.00 123 18 89 3 9 4
........................................................TGAGTATTACATCAGGTACTGGTTT............................................................................................. 25 1 1 111.00 111 100 3 5 2 1
........................................................TGAGTATTACATCATGTACTGGT............................................................................................... 23 1 1 109.00 109 12 78 16 2 1
........................................................TGAGTATTACATCAGGTACTGGG............................................................................................... 23 1 1 107.00 107 20 15 70 1 1
..........................................................AGTATTACATCAGGTACTGG................................................................................................ 20 0 1 101.00 101 101 0 0 0 0
........................................................TTAGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 100.00 100 21 72 3 4 0
.......................................................CTGAGTATTACATCAGGTACTGGT............................................................................................... 24 1 1 89.00 89 48 39 0 2 0
.....................................CTGGCAGCGCCTGTACGGT...................................................................................................................... 19 0 1 88.00 88 25 50 0 2 11
............................................................TATTACATCAGGTACTGGT............................................................................................... 19 0 1 84.00 84 49 8 0 1 26
........................................................TGAGCATTACATCAGGTACTGGT............................................................................................... 23 1 1 78.00 78 16 53 2 5 2
.........................................................GAGTATTACATCAGGTACTGGTT.............................................................................................. 23 1 1 78.00 78 78 0 0 0 0
........................................................TGAGTATTACACCAGGTACTGGT............................................................................................... 23 1 1 73.00 73 41 28 0 3 1
........................................................TGAGTATTACATCAGGTACTGTT............................................................................................... 23 1 1 72.00 72 17 30 24 1 0
........................................................TGAGTATTACATAAGGTACTGGT............................................................................................... 23 1 1 72.00 72 0 59 4 9 0
........................................................TGATTATTACATCAGGTACTGGT............................................................................................... 23 1 1 70.00 70 8 57 1 2 2
........................................................TGAGTATTACATCAGTTACTGGT............................................................................................... 23 1 1 68.00 68 13 32 19 2 2
........................................................TGAGTATTACATCAGTTACTG................................................................................................. 21 1 1 67.00 67 8 2 57 0 0
............................................................TATTACATCAGGTACTGG................................................................................................ 18 0 1 66.00 66 59 6 0 0 1
........................................................TGAGTATTACAACAGGTACTGGT............................................................................................... 23 1 1 63.00 63 57 6 0 0 0
..................................................................................................CAGTACTTATGTCATACTACG....................................................... 21 0 1 62.00 62 42 11 7 1 1
........................................................TGAGTATTACATCAGGTACTGGTCC............................................................................................. 25 2 1 61.00 61 55 0 2 4 0
........................................................TGAGTATTACATCAGGTACTTGT............................................................................................... 23 1 1 60.00 60 7 52 0 1 0
........................................................TGGGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 58.00 58 17 37 1 2 1
........................................................TGAGTATTACAACAGGTACTGG................................................................................................ 22 1 1 57.00 57 56 1 0 0 0
........................................................TGAGTATTACATCGGGTACTGGT............................................................................................... 23 1 1 57.00 57 19 32 2 2 2
........................................................TGAGTATTACATCAGGTACTGGTCT............................................................................................. 25 1 1 56.00 56 23 0 30 3 0
........................................................TGAGTATTACATCAGGTA.................................................................................................... 18 0 1 55.00 55 20 30 0 2 3
........................................................TGAGTATTACATCAGGGACTGGT............................................................................................... 23 1 1 50.00 50 9 35 0 6 0
........................................................TGAGTATTACACCAGGTACTGG................................................................................................ 22 1 1 50.00 50 43 5 0 1 1
........................................................CGAGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 49.00 49 10 32 0 5 2
........................................................TGAGTACTACATCAGGTACTGGT............................................................................................... 23 1 1 49.00 49 9 36 0 1 3
........................................................TGAGTATTGCATCAGGTACTGGT............................................................................................... 23 1 1 48.00 48 15 29 0 3 1
...........................................................GTATTACATCAGGTACTGGT............................................................................................... 20 0 1 48.00 48 39 5 0 1 3
.......................................................CTGAGTATTACATCAGGTACTGG................................................................................................ 23 1 1 45.00 45 42 3 0 0 0
........................................................TGAGTATTACATCAGGAACTGGT............................................................................................... 23 1 1 44.00 44 9 32 0 3 0
........................................................TGAGTATTACATCAGGTACCGGT............................................................................................... 23 1 1 42.00 42 9 30 2 0 1
........................................................TGAGTATTACGTCAGGTACTGGT............................................................................................... 23 1 1 40.00 40 8 28 0 2 2
........................................................TTAGTATTACATCAGGTACTGG................................................................................................ 22 1 1 40.00 40 29 8 2 1 0
........................................................TGAGTATTACATCAGGTACTGGTGT............................................................................................. 25 0 1 37.00 37 14 20 1 1 1
...........................................................GTATTACATCAGGTACTGG................................................................................................ 19 0 1 37.00 37 34 1 1 1 0
........................................................TGAGTATCACATCAGGTACTGGT............................................................................................... 23 1 1 37.00 37 5 26 1 4 1
........................................................TGAGTATTACAGCAGGTACTG................................................................................................. 21 1 1 36.00 36 36 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGA................................................................................................ 22 1 1 36.00 36 30 3 1 2 0
........................................................TGAGTATTACATCAGGTGCTGGT............................................................................................... 23 1 1 34.00 34 9 22 0 3 0
........................................................TGAGTGTTACATCAGGTACTGGT............................................................................................... 23 1 1 34.00 34 9 24 0 1 0
........................................................TGAGTATTACATCAGTTACTGG................................................................................................ 22 1 1 34.00 34 24 6 2 2 0
........................................................TGAGTATTACATCAGGTACTAGT............................................................................................... 23 1 1 33.00 33 5 25 0 3 0
........................................................TGAGTATTACATCAGGTACTGGTAA............................................................................................. 25 2 1 33.00 33 20 6 5 1 1
........................................................TGACTATTACATCAGGTACTGGT............................................................................................... 23 1 1 31.00 31 6 23 0 0 2
........................................................TGAGCATTACATCAGGTACTGG................................................................................................ 22 1 1 30.00 30 17 11 0 2 0
........................................................TGAGTATTACATCCGGTACTGGT............................................................................................... 23 1 1 29.00 29 2 24 0 2 1
........................................................TGAGTATTAAATCAGGTACTGGT............................................................................................... 23 1 1 29.00 29 1 21 0 5 2
........................................................TGAGTATTACATCAGGTACTCGT............................................................................................... 23 1 1 29.00 29 6 18 5 0 0
........................................................TGAGTATTACATCAGGTAATGGT............................................................................................... 23 1 1 28.00 28 0 18 0 10 0
.........................................................GAGTATTACATCAGGTACTGT................................................................................................ 21 1 1 28.00 28 24 0 4 0 0
........................................................TGAGTATTACATCAGCTACTGGT............................................................................................... 23 1 1 27.00 27 5 15 3 2 2
.......................................................GTGAGTATTACATCAGGTACTGGT............................................................................................... 24 1 1 27.00 27 27 0 0 0 0
........................................................TGAGTATTACATCATGTACTGG................................................................................................ 22 1 1 27.00 27 17 7 3 0 0
.........................................................TAGTATTACATCAGGTACTGGT............................................................................................... 22 1 1 26.00 26 9 11 3 0 3
........................................................TGAGTATTACATCACGTACTGGT............................................................................................... 23 1 1 26.00 26 4 19 3 0 0
........................................................TGAGTATTACATCGGGTACTGG................................................................................................ 22 1 1 26.00 26 22 1 0 3 0
.......................................................ATGAGTATTACATCAGGTACTGG................................................................................................ 23 1 1 26.00 26 26 0 0 0 0
........................................................TGAGTATTACATCAGGTCCTGGT............................................................................................... 23 1 1 26.00 26 1 23 0 2 0
........................................................TGAGTATTACATCAGATACTGGT............................................................................................... 23 1 1 25.00 25 12 12 0 1 0
........................................................TGAGTATTACATTAGGTACTGGT............................................................................................... 23 1 1 25.00 25 3 21 0 0 1
........................................................TGAGTATTACATCATGTACTG................................................................................................. 21 1 1 25.00 25 11 3 10 1 0
.........................................................GAGTATTACATCAGGTACTGGTA.............................................................................................. 23 1 1 24.00 24 24 0 0 0 0
........................................................TGAGTATTACCTCAGGTACTGGT............................................................................................... 23 1 1 24.00 24 2 18 0 4 0
..........................................................AGTATTACATCAGGTACTG................................................................................................. 19 0 1 24.00 24 24 0 0 0 0
........................................................TGAGTATTATATCAGGTACTGGT............................................................................................... 23 1 1 24.00 24 4 20 0 0 0
.......................................................TTGAGTATTACATCAGGTACTGGT............................................................................................... 24 0 1 24.00 24 23 0 0 1 0
........................................................TGAGAATTACATCAGGTACTGGT............................................................................................... 23 1 1 24.00 24 6 14 2 1 1
........................................................TGAGTATTACATCAGGAACTGG................................................................................................ 22 1 1 24.00 24 20 3 0 1 0
........................................................TGGGTATTACATCAGGTACTGG................................................................................................ 22 1 1 23.00 23 18 5 0 0 0
........................................................TGAGGATTACATCAGGTACTGGT............................................................................................... 23 1 1 23.00 23 4 14 2 1 2
........................................................TGAGTATTACATCAGGTACTGCT............................................................................................... 23 1 1 23.00 23 5 14 2 1 1
........................................................TGATTATTACATCAGGTACTG................................................................................................. 21 1 1 23.00 23 7 1 15 0 0
........................................................TGAGTATTACATCAGGCACTGG................................................................................................ 22 1 1 22.00 22 18 3 0 1 0
........................................................TAAGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 22.00 22 3 16 1 2 0
..........................................................TGAGTTACATCAGGTACTGGT............................................................................................... 21 3 1 22.00 22 6 14 0 0 2
.......................................................ATGAGTATTACATCAGGTACTGGT............................................................................................... 24 1 1 21.00 21 21 0 0 0 0
.......................................................GTGAGTATTACATCAGGTACTGG................................................................................................ 23 1 1 21.00 21 21 0 0 0 0
........................................................TGAGTATTACATCAGCTACTG................................................................................................. 21 1 1 21.00 21 4 4 13 0 0
........................................................TGAGTATTACATCAGGTATTGGT............................................................................................... 23 1 1 20.00 20 1 17 0 2 0
........................................................TGCGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 20.00 20 2 17 0 1 0
........................................................TCAGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 20.00 20 4 12 0 2 2
........................................................TGAGTATTCCATCAGGTACTGGT............................................................................................... 23 1 1 20.00 20 0 15 0 3 2
........................................................TGAGTATTACATCAGGTACC.................................................................................................. 20 1 1 20.00 20 1 0 18 1 0
.........................................................TAGTATTACATCAGGTACTGG................................................................................................ 21 1 1 20.00 20 19 0 0 0 1
.........................................................GAGTATTACATCAGGTACTGGTC.............................................................................................. 23 1 1 20.00 20 20 0 0 0 0
........................................................CGAGTATTACATCAGGTACTGG................................................................................................ 22 1 1 20.00 20 12 6 0 1 1
...........................................................GTATTACATCAGGTACTG................................................................................................. 18 0 1 19.00 19 19 0 0 0 0
......................................TGGCAGCGCCTGTACGGT...................................................................................................................... 18 0 1 19.00 19 7 11 0 0 1
........................................................TGAGTATTACATCAGGTACTGAT............................................................................................... 23 1 1 19.00 19 0 17 0 2 0
........................................................TGAGTATTACATCAGGTACAGGT............................................................................................... 23 1 1 18.00 18 7 10 0 1 0
........................................................TGAGTATTACAGCAGGTACT.................................................................................................. 20 1 1 17.00 17 17 0 0 0 0
.......................................................TTGAGTATTACATCAGGTACTGG................................................................................................ 23 0 1 17.00 17 17 0 0 0 0
........................................................TGAGTATTACATCAGGTACTTG................................................................................................ 22 1 1 17.00 17 7 6 4 0 0
........................................................TGAGTATTACATCAGGTGCTGG................................................................................................ 22 1 1 17.00 17 12 4 0 1 0
........................................................TGAGTATTACGTCAGGTACTGG................................................................................................ 22 1 1 17.00 17 15 1 0 1 0
.........................................................GAGTATTACATCAGGTAC................................................................................................... 18 0 1 17.00 17 17 0 0 0 0
........................................................TGAATATTACATCAGGTACTGGT............................................................................................... 23 1 1 16.00 16 2 10 0 4 0
........................................................TGAGTATTACAACAGGTACTG................................................................................................. 21 1 1 16.00 16 16 0 0 0 0
........................................................TGAGTATTACATCAGGTACTT................................................................................................. 21 1 1 16.00 16 14 2 0 0 0
........................................................TGAGTATTACATCTGGTACTGGT............................................................................................... 23 1 1 16.00 16 3 12 0 1 0
....................................GCTGGCAGCGCCTGTACGGT...................................................................................................................... 20 0 1 15.00 15 2 9 0 1 3
........................................................TGAGTATTACATCAAGTACTGGT............................................................................................... 23 1 1 15.00 15 6 6 1 2 0
........................................................TGAGTATTACATCAGGGACTGG................................................................................................ 22 1 1 15.00 15 11 3 1 0 0
..................................................................................................CAGTACTTATGTCATACTACGCT..................................................... 23 1 1 15.00 15 9 4 1 1 0
........................................................TGAGTATTGCATCAGGTACTGG................................................................................................ 22 1 1 14.00 14 11 2 0 1 0
...................................CGCTGGCAGCGCCTGTACGGT...................................................................................................................... 21 0 1 14.00 14 6 0 0 0 8
........................................................TGAGTATTACATCGGGTACTG................................................................................................. 21 1 1 14.00 14 10 4 0 0 0
........................................................TGATTATTACATCAGGTACTGG................................................................................................ 22 1 1 14.00 14 12 2 0 0 0
........................................................TGAGTATTACATCAGGTACTGGTAAA............................................................................................ 26 3 1 13.00 13 3 10 0 0 0
........................................................TGAGTCTTACATCAGGTACTGGT............................................................................................... 23 1 1 13.00 13 0 12 0 0 1
........................................................TGAGTATTACATCAGGTACCGG................................................................................................ 22 1 1 13.00 13 9 3 0 0 1
........................................................TGAGTATTTCATCAGGTACTGGT............................................................................................... 23 1 1 13.00 13 4 8 0 1 0
..................................................................................................CAGTACTTATGTCATACTACGCA..................................................... 23 1 1 13.00 13 6 7 0 0 0
........................................................TGAGGATTACATCAGGTACTGG................................................................................................ 22 1 1 13.00 13 9 0 3 1 0
........................................................TTAGTATTACATCAGGTACTG................................................................................................. 21 1 1 12.00 12 7 3 2 0 0
........................................................AGAGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 12.00 12 7 2 0 3 0
........................................................TGAGTGTTACATCAGGTACTGG................................................................................................ 22 1 1 12.00 12 7 2 0 2 1
..................................................................................................CAGTACTTATGTCATACTAC........................................................ 20 0 1 12.00 12 2 2 8 0 0
........................................................TGAGTATTACATAAGGTACTGG................................................................................................ 22 1 1 11.00 11 4 3 0 4 0
........................................................TGAGTATTACATCAGCTACTGG................................................................................................ 22 1 1 11.00 11 9 1 0 0 1
........................................................TGAGTATTACATCAGGTACTGGTCCC............................................................................................ 26 3 1 11.00 11 11 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGGTAT............................................................................................. 25 1 1 11.00 11 8 2 0 1 0
........................................................TGAGTATTACATCAGGTACTGGTGA............................................................................................. 25 1 1 11.00 11 7 4 0 0 0
........................................................TGAGTATTATATCAGGTACTGG................................................................................................ 22 1 1 11.00 11 5 3 1 2 0
...................................................................................................AGTACTTATGTCATACTACGC...................................................... 21 0 1 11.00 11 10 1 0 0 0
.........................................................GAGTATTACATGAGGTACTGG................................................................................................ 21 1 1 11.00 11 11 0 0 0 0
........................................................TGAGTATTACACCAGGTACTG................................................................................................. 21 1 1 11.00 11 9 2 0 0 0
........................................................TGAGTATTACATCAGGGACTG................................................................................................. 21 1 1 11.00 11 9 0 1 1 0
..........................................................AGTATTACATCAGGTACT.................................................................................................. 18 0 1 11.00 11 11 0 0 0 0
........................................................GGAGTATTACATCAGGTACTGG................................................................................................ 22 1 1 11.00 11 9 1 0 1 0
..........................................................TGTATTACATCAGGTACTGGT............................................................................................... 21 1 1 11.00 11 1 8 0 0 2
........................................................TGAGTATTACATGAGGTACTGGT............................................................................................... 23 1 1 10.00 10 1 4 5 0 0
........................................................GGAGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 10.00 10 2 3 0 5 0
........................................................TGAGTATTACATCAGGTACGG................................................................................................. 21 1 1 10.00 10 1 0 9 0 0
........................................................TGAGAATTACATCAGGTACTGG................................................................................................ 22 1 1 10.00 10 8 1 1 0 0
..................................................................................................CAGTACTTGTGTCATACTACGC...................................................... 22 1 1 10.00 10 7 0 0 3 0
........................................................TCAGTATTACATCAGGTACTGG................................................................................................ 22 1 1 10.00 10 7 1 0 1 1
........................................................TGGGTATTACATCAGGTACTG................................................................................................. 21 1 1 10.00 10 6 1 3 0 0
.........................................................GAGTATTACATCAGGTACTGGTG.............................................................................................. 23 0 1 10.00 10 10 0 0 0 0
........................................................TGAGTATTACATCAGGTACTCG................................................................................................ 22 1 1 10.00 10 5 3 1 0 1
........................................................TGAGTATTACATCAGGCACTG................................................................................................. 21 1 1 9.00 9 3 4 0 1 1
........................................................TGAGTATTACATCAGGTTCTGGT............................................................................................... 23 1 1 9.00 9 4 4 0 1 0
........................................................TGAGTATCACATCAGGTACTGG................................................................................................ 22 1 1 9.00 9 5 3 0 1 0
........................................................CGAGTATTACATCAGGTACTG................................................................................................. 21 1 1 9.00 9 4 3 1 1 0
........................................................TGAGTATTACATCAGGTACTAG................................................................................................ 22 1 1 9.00 9 5 3 0 1 0
.........................................................GAGTATTACATCAGGTACTGGA............................................................................................... 22 1 1 9.00 9 9 0 0 0 0
........................................................TGTGTATTACATCAGGTACTGGT............................................................................................... 23 1 1 9.00 9 2 6 0 1 0
........................................................TGAGTATTACAACAGGTACT.................................................................................................. 20 1 1 9.00 9 8 0 0 1 0
........................................................TGAGTACTACATCAGGTACTGG................................................................................................ 22 1 1 8.00 8 6 2 0 0 0
........................................................TGAGTATTACTTCAGGTACTGGT............................................................................................... 23 1 1 8.00 8 5 3 0 0 0
.........................................................GAGTATTACATAAGGTACTGG................................................................................................ 21 1 1 8.00 8 8 0 0 0 0
........................................................TGAGTATTACATTAGGTACTGG................................................................................................ 22 1 1 8.00 8 1 5 0 2 0
........................................................TGAGTATTACATCAGGTACTGGTTA............................................................................................. 25 2 1 8.00 8 5 1 1 1 0
........................................................TGAGTATTACATCAGGTACTGGTTTT............................................................................................ 26 2 1 8.00 8 8 0 0 0 0
........................................................TGAGTATTACATCACGTACTGG................................................................................................ 22 1 1 8.00 8 7 1 0 0 0
........................................................TGAGTATTACATCAGATACTGG................................................................................................ 22 1 1 8.00 8 6 2 0 0 0
........................................................TGATTATTACATCAGGTACT.................................................................................................. 20 1 1 7.00 7 0 0 7 0 0
.........................................................GAGTATTACATAAGGTACTGGT............................................................................................... 22 1 1 7.00 7 7 0 0 0 0
.............................................................ATTACATCAGGTACTGGTT.............................................................................................. 19 1 1 7.00 7 7 0 0 0 0
........................................................TGAGTTTTACATCAGGTACTGGT............................................................................................... 23 1 1 7.00 7 2 3 0 2 0
........................................................TGAGTATTACATCAGGTAATGG................................................................................................ 22 1 1 7.00 7 2 1 0 4 0
........................................................TAAGTATTACATCAGGTACTGG................................................................................................ 22 1 1 7.00 7 4 1 0 2 0
........................................................TGAGTATTACATCAGGTACG.................................................................................................. 20 1 1 7.00 7 0 0 7 0 0
........................................................TGAGTATTACCTCAGGTACTGG................................................................................................ 22 1 1 7.00 7 3 2 0 2 0
........................................................TGATTATTACATCAGGTACTGT................................................................................................ 22 2 1 7.00 7 0 0 7 0 0
........................................................TGAGTAATACATCAGGTACTGGT............................................................................................... 23 1 1 7.00 7 0 6 0 0 1
.........................................................GAGTATTACATCAGGTACTGGTTT............................................................................................. 24 1 1 7.00 7 7 0 0 0 0
........................................................TGAGTATTGCATCAGGTACTG................................................................................................. 21 1 1 7.00 7 7 0 0 0 0
........................................................TGAGTATTACATCAGGTACTA................................................................................................. 21 1 1 7.00 7 5 2 0 0 0
........................................................TGAGGATTACATCAGGTACTG................................................................................................. 21 1 1 6.00 6 1 2 3 0 0
........................................................TGAGTATTACATCAGGTGCTG................................................................................................. 21 1 1 6.00 6 4 2 0 0 0
........................................................TGAGTATTACGTCAGGTACTG................................................................................................. 21 1 1 6.00 6 3 2 0 1 0
........................................................TGAGTATTACATCAGGTACTGTA............................................................................................... 23 2 1 6.00 6 6 0 0 0 0
........................................................TGAGTATTACATCAGGTACTC................................................................................................. 21 1 1 6.00 6 5 1 0 0 0
........................................................TGAGTATTACATCAAGTACTGG................................................................................................ 22 1 1 6.00 6 4 0 0 2 0
.......................................................CTGAGTATTACATCAGGTACT.................................................................................................. 21 1 1 6.00 6 6 0 0 0 0
........................................................TGAGTAGTACATCAGGTACTGGT............................................................................................... 23 1 1 6.00 6 1 5 0 0 0
........................................................TGAGTATTACATTAGGTACTG................................................................................................. 21 1 1 6.00 6 2 2 1 1 0
........................................................TGAGTATTACATCCGGTACTGG................................................................................................ 22 1 1 6.00 6 0 6 0 0 0
...................................................................................................AGTACTTATGTCATACTACG....................................................... 20 0 1 6.00 6 6 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGGAA.............................................................................................. 24 2 1 6.00 6 4 0 0 0 2
........................................................TGAGTATTACATCATGTACT.................................................................................................. 20 1 1 6.00 6 3 2 0 1 0
.........................................................GAGTATTACATCAGTTACTGG................................................................................................ 21 1 1 5.00 5 5 0 0 0 0
........................................................TGAGTATTACATCAGGTACAGG................................................................................................ 22 1 1 5.00 5 4 0 0 1 0
........................................................TGAGTATTACATCACGTACTG................................................................................................. 21 1 1 5.00 5 1 0 4 0 0
........................................................TGAGTATTACATCAGGTACCG................................................................................................. 21 1 1 5.00 5 3 1 0 1 0
........................................................TGAGCATTACATCAGGTACTG................................................................................................. 21 1 1 5.00 5 1 1 0 3 0
........................................................TGAGTATTACATCAGGTACTGGAT.............................................................................................. 24 2 1 5.00 5 0 0 5 0 0
........................................................TGAGTATTACATCAGGAACTG................................................................................................. 21 1 1 5.00 5 5 0 0 0 0
..........................................................TGTATTACATCAGGTACTGG................................................................................................ 20 1 1 5.00 5 4 0 0 0 1
........................................................TGAGTATTAGATCAGGTACTGGT............................................................................................... 23 1 1 5.00 5 1 4 0 0 0
........................................................TGAGTATTACATCAGGTAGTGGT............................................................................................... 23 1 1 5.00 5 1 4 0 0 0
........................................................TGACTATTACATCAGGTACTGG................................................................................................ 22 1 1 5.00 5 5 0 0 0 0
........................................................TGAGTACTACATCAGGTACTG................................................................................................. 21 1 1 5.00 5 3 1 0 0 1
........................................................TGAGTATTACATCAGGAACT.................................................................................................. 20 1 1 5.00 5 4 0 0 1 0
.......................................................TTGAGTATTACATCAGGTACTG................................................................................................. 22 0 1 5.00 5 5 0 0 0 0
........................................................TGAGTATTACATCAGGTACGGGT............................................................................................... 23 1 1 5.00 5 1 4 0 0 0
........................................................TGAGTATTACATCAGTTACT.................................................................................................. 20 1 1 5.00 5 3 1 0 1 0
........................................................TGAGTATTACATCAGTTACTGGTT.............................................................................................. 24 2 1 5.00 5 0 1 4 0 0
..........................................................AGTATTACATCAGGTACTGGTT.............................................................................................. 22 1 1 5.00 5 5 0 0 0 0
........................................................AGAGTATTACATCAGGTACTGG................................................................................................ 22 1 1 5.00 5 4 1 0 0 0
........................................................TGAGTATTACATCAGGTACTGGCT.............................................................................................. 24 2 1 5.00 5 2 2 1 0 0
........................................................TGAGTATTACATCAGGTACTGGTCCT............................................................................................ 26 3 1 4.00 4 2 0 0 2 0
........................................................TGAGTATTGCATCAGGTACT.................................................................................................. 20 1 1 4.00 4 2 1 1 0 0
........................................................TGAGTATTACATCAGGTCCTGG................................................................................................ 22 1 1 4.00 4 1 1 0 2 0
.......................................................ATGAGTATTACATCAGGTACTG................................................................................................. 22 1 1 4.00 4 4 0 0 0 0
........................................................TGAGTATTACATAAGGTACTG................................................................................................. 21 1 1 4.00 4 0 1 2 1 0
........................................................TGAGTAGTACATCAGGTACTGG................................................................................................ 22 1 1 4.00 4 4 0 0 0 0
........................................................TGACTATTACATCAGGTACTG................................................................................................. 21 1 1 4.00 4 3 1 0 0 0
........................................................TGAGTATTACATCAGGTACTGTTT.............................................................................................. 24 2 1 4.00 4 3 0 1 0 0
........................................................TCAGTATTACATCAGGTACT.................................................................................................. 20 1 1 4.00 4 4 0 0 0 0
.........................................................GAGTATTACATCAGGTACTGGTCC............................................................................................. 24 2 1 4.00 4 4 0 0 0 0
.........................................................GAGTATTACATCAGTTACTG................................................................................................. 20 1 1 4.00 4 2 0 2 0 0
........................................................TGCGTATTACATCAGGTACTGG................................................................................................ 22 1 1 4.00 4 1 2 0 1 0
........................................................TGAGTATTACATCAGTTACTGT................................................................................................ 22 2 1 4.00 4 0 0 4 0 0
........................................................TCAGTATTACATCAGGTACTG................................................................................................. 21 1 1 4.00 4 1 0 3 0 0
........................................................TGAGTATTACAGCAGGTACTGGTT.............................................................................................. 24 2 1 4.00 4 4 0 0 0 0
......................................................GTTGAGTATTACATCAGGTACTGG................................................................................................ 24 0 1 4.00 4 4 0 0 0 0
........................................................TGAGTATTACACCAGGTACT.................................................................................................. 20 1 1 4.00 4 4 0 0 0 0
........................................................TGAGTTTTACATCAGGTACTGG................................................................................................ 22 1 1 4.00 4 3 1 0 0 0
..................................................................................................CAGTACTTATGTCATACT.......................................................... 18 0 1 4.00 4 1 0 3 0 0
........................................................TGATTATTACATCAGGTAC................................................................................................... 19 1 1 4.00 4 0 0 4 0 0
........................................................TGAGTATTAAATCAGGTACTGG................................................................................................ 22 1 1 4.00 4 1 1 0 2 0
.........................................................TAGTATTACATCAGGTACTG................................................................................................. 20 1 1 3.00 3 2 1 0 0 0
........................................................TGAGTATTACAACAGGTACTGGTT.............................................................................................. 24 2 1 3.00 3 2 0 0 1 0
........................................................TGAGTATTACATCGGGTACTGGTT.............................................................................................. 24 2 1 3.00 3 2 1 0 0 0
...........................................................GTATTACATCAGGTACTGGTT.............................................................................................. 21 1 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATCAGGTACTACT............................................................................................... 23 2 1 3.00 3 1 2 0 0 0
......................................................AGTGAGTATTACATCAGGTACTGG................................................................................................ 24 2 1 3.00 3 3 0 0 0 0
......................................................AGTGAGTATTACATCAGGTACTGGT............................................................................................... 25 2 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATCAGGTATTGG................................................................................................ 22 1 1 3.00 3 2 1 0 0 0
........................................................TGAGTATTACTTCAGGTACTGG................................................................................................ 22 1 1 3.00 3 2 1 0 0 0
........................................................TGAGTATTACATGAGGTAC................................................................................................... 19 1 1 3.00 3 0 0 3 0 0
.......................................................ATGAGTATTACATCAGGTACT.................................................................................................. 21 1 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGAC............................................................................................... 23 2 1 3.00 3 0 0 3 0 0
........................................................TGAGTATTACATCAGGTACTGGTAAT............................................................................................ 26 3 1 3.00 3 1 2 0 0 0
.........................................................GAGTATTACACCAGGTACTGG................................................................................................ 21 1 1 3.00 3 3 0 0 0 0
........................................................TGAGGATTACATCAGGTACTGT................................................................................................ 22 2 1 3.00 3 0 0 3 0 0
.........................................................GAGTATTACATCAGGTACTGGC............................................................................................... 22 1 1 3.00 3 3 0 0 0 0
........................................................AGAGTATTACATCAGGTACTG................................................................................................. 21 1 1 3.00 3 2 0 0 1 0
........................................................TGAGTATTACATCAGGAACTGGC............................................................................................... 23 2 1 3.00 3 1 1 0 1 0
........................................................TGAGTATTACATCTGGTACTGG................................................................................................ 22 1 1 3.00 3 1 1 1 0 0
........................................................TTAGTATTACATCAGGTACTGT................................................................................................ 22 2 1 3.00 3 2 0 1 0 0
.........................................................GAGTATTACATAAGGTACT.................................................................................................. 19 1 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATCAGGTACTGGTTG............................................................................................. 25 2 1 3.00 3 3 0 0 0 0
.........................................................GAGTATTACATGAGGTACTGGT............................................................................................... 22 1 1 3.00 3 3 0 0 0 0
.........................................................GAGTATTACATCAGGTACTGC................................................................................................ 21 1 1 3.00 3 1 1 1 0 0
........................................................TGAGTATTACATCAGGTCCTG................................................................................................. 21 1 1 3.00 3 0 1 0 2 0
.......................................................GTGAGTATTACATCAGGTACT.................................................................................................. 21 1 1 3.00 3 3 0 0 0 0
.........................................................GAGCATTACATCAGGTACTGGT............................................................................................... 22 1 1 3.00 3 3 0 0 0 0
........................................................TAAGTATTACATCAGGTACTG................................................................................................. 21 1 1 3.00 3 1 2 0 0 0
........................................................TGAGTATTACATGAGGTACT.................................................................................................. 20 1 1 3.00 3 0 0 3 0 0
.....................................................ATTTGAGTATTACATCAGGTACTGGT............................................................................................... 26 2 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATAAGGTACT.................................................................................................. 20 1 1 3.00 3 0 1 2 0 0
............................................................TATTACATCAGGTACTGT................................................................................................ 18 1 1 3.00 3 0 0 3 0 0
..................................................................................................CAGTACTTGTGTCATACTACG....................................................... 21 1 1 3.00 3 2 0 0 1 0
........................................................TTAGTATTACATCAGGTACT.................................................................................................. 20 1 1 3.00 3 2 0 0 1 0
........................................................TGAGTATTATATCAGGTAC................................................................................................... 19 1 1 3.00 3 0 0 3 0 0
........................................................TGACTATTACATCAGGTACT.................................................................................................. 20 1 1 3.00 3 0 0 2 1 0
........................................................TGAGTATTACATCAGTTACTGGG............................................................................................... 23 2 1 3.00 3 0 0 3 0 0
.........................................................GAGTATTACATCAGGTACTGTT............................................................................................... 22 1 1 3.00 3 3 0 0 0 0
.......................................................CTGAGTATTACATCAGGTACTG................................................................................................. 22 1 1 3.00 3 3 0 0 0 0
.........................................................GAGTATTACATCAGGTACTGA................................................................................................ 21 1 1 3.00 3 3 0 0 0 0
........................................................TGAGTATCACATCAGGTACT.................................................................................................. 20 1 1 3.00 3 3 0 0 0 0
............................................................TATTACATCAGGTACTGGTT.............................................................................................. 20 1 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATCAGGCACTGGTT.............................................................................................. 24 2 1 3.00 3 3 0 0 0 0
........................................................TGAGTATTACATCAGGTACTTT................................................................................................ 22 2 1 3.00 3 2 0 1 0 0
........................................................TGAGTATTACATCAGGGACT.................................................................................................. 20 1 1 3.00 3 2 0 1 0 0
........................................................TGAGTGTTACATCAGGTACTG................................................................................................. 21 1 1 3.00 3 2 1 0 0 0
........................................................TGAGTATTACATCAGGTACTGGTTC............................................................................................. 25 2 1 3.00 3 0 0 0 3 0
........................................................TGAGTATTACATCAGGTACGGG................................................................................................ 22 1 1 3.00 3 2 1 0 0 0
......................................................GCTGAGTATTACATCAGGTACTGG................................................................................................ 24 1 1 3.00 3 3 0 0 0 0
..........................................................TGAGTTACATCAGGTACTGG................................................................................................ 20 3 3 2.33 7 3 3 0 0 1
.........................................................GAGTATTACATCGGGTACTGGT............................................................................................... 22 1 1 2.00 2 2 0 0 0 0

Anti-sense strand reads

ACCTCTAAGAGAGCTCGCCGAGGTAGCTTGTGTCGGCGACCGTCGCGGACATGCCAACTCATAATGTAGTCCATGACCACACGGAAATTAGGTTGTTGGTCATGAATACAGTATGATGCGGCACGTGCCTAGCGTGATTGACGTACAGGTGTGGTAGGACTAGTAGTAGTAGCA

***************************************..(((((((((((((..(((((.((((.((((((((((((............)).)))))))))))))).)))))..)))))))).))..))).*****************************************
Read size # Mismatch Hit Count Total Norm Total M045

female body

V118

embryo

V117

male body
M020

head

V119

head

................................................................................................TGGTCATGACTACATTATGAG......................................................... 21 3 1 2.00 2 2 0 0 0 0
......................................................................................................................CGGCACGTCCCAAGCTTG...................................... 18 3 13 2.00 26 17 0 1 8 0
.................................................................................................GGTCATGACTACATTATGAG......................................................... 20 3 3 1.00 3 3 0 0 0 0
..................................................................................................................................................AGGTGTCGTAGGCCTGGTAGT....... 21 3 9 1.00 9 0 9 0 0 0
...................................................................................................................................................GGTGTGGTAGGCCAGGTAGTA...... 21 3 2 0.50 1 0 0 1 0 0
...................................................................AGTACATGACCACACGAAA........................................................................................ 19 2 2 0.50 1 1 0 0 0 0
.................................................................................................GGTCATGACTACATTATGAGG........................................................ 21 3 3 0.33 1 1 0 0 0 0
.................................................................................................................................................CAGGTGTCGTAGGCCTGGTAG........ 21 3 4 0.25 1 0 1 0 0 0
..................................................................................................GTCATGACTACATTATGAG......................................................... 19 3 17 0.18 3 2 0 0 1 0
...................................................................................GAAGTAAGGTTGGTGGTCAT....................................................................... 20 3 7 0.14 1 0 0 1 0 0
.................................................................................CGGAAATGAGGTGGTTGATC......................................................................... 20 3 10 0.10 1 0 0 0 0 1
.................................................................................CGGAAATGGGGTTGTTGATC......................................................................... 20 3 12 0.08 1 1 0 0 0 0
..................................................................AAGTACATGACCACACGAAA........................................................................................ 20 3 13 0.08 1 1 0 0 0 0
......................................................................................................................................................ATGGTGGGACTAGTAGTA...... 18 2 20 0.05 1 0 0 1 0 0
......................................................................................................................CGGCACGTACCAAGCTTG...................................... 18 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004515:1592707-1592880 - dwi-mir-12 Known_mirbase TGGAG--ATT-CTCTCGAGCGGCTCCATCG--------------A--------------------------------------------------------------------------ACACAGCCGC--TGGCAGCGCCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACTGCATGTCCACACCA---------------TCCTGA-------TCATCATCATCG--T
droVir3 scaffold_12970:2049274-2049452 + dvi-mir-12 Known_mirbase CAACA--TTAAT--AGCAGCCGCATCAA-------------------C--------------------------------A--------G-CCG-------------------------CATCAGCATCCGCATCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCCTTTCAA-AA-------------A-------TGTTTATGTTCG--C
droMoj3 scaffold_6359:3259778-3259889 + dmo-mir-12 Known_mirbase --------------------------------------------------------------------------------------------------------------------------------------CAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCAATTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC---------------------------------------------
droGri2 scaffold_14853:6951669-6951803 - dgr-mir-12 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACCAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCCTA----CAAAAC--------AAA-------TAATTACCCGCG--C
dp5 XL_group1a:977977-978129 + dps-mir-12 Known_mirbase TCG---------------------------------------------------------------------CGACGC------------------------------GTT-TCCAG----------GATCCAGCAGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGACCA---------------AGCCAA-----------AGCCAAAG--A
droPer2 scaffold_26:1092611-1092776 + dpe-mir-12 Known_mirbase TAAC------------------------------------------------------------CATT--CGCGACGC------------------------------GTT-TCCAG----------GATCCAGCAGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGACCA---------------AGCCAAAG-----CCAAAGCCAAAG--A
droAna3 scaffold_12929:2898558-2898725 - dan-mir-12 Known_mirbase TGGAT--GTT-C-----------------------------------------------------CCC--TCCGATAA-AAAAAAAT--GAAAAT-----ATCC-TGGAAA-CACAC---------TCGACAACTGGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCTCC----------------------------------------------A
droBip1 scf7180000396740:80349-80495 - TGGAT--GTA-C-----------------------------------------------------TGC--TC-------------------------------C-TGGAAAACACAC------AA-CCAATGAATGGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC-----------------------------------------------
droKik1 scf7180000302696:761556-761693 + CGGAG--GAG-C-------------------------------------------------------------------------------------------------------------------------TCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGCCAAA------------GCAACTAAGCCAACA---------------CG--C
droFic1 scf7180000454038:647488-647667 + TGGAGCA-------------------GT--------AGCACTTCAATC--------------GGCCCT--CGGGAA---GT--------GAAGGAC-----------CCAA-T---CGAA---AG--AAGAGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTAAAATCGAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAACCA-----G-AACC-----------------------------CG--A
droEle1 scf7180000491023:1178522-1178703 - TGGG---------------------------AGCAGAGCTATCCAACG----AGTAGGGAT---CCCT--CGCGACG---T------GAGAAGGAA--------------------------CAGCCCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCCTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCAAAATA----------CA--------------------------AAAT--A
droRho1 scf7180000777097:73403-73549 - CGCC----------------------------------------------------------ATCCCT--CGCGACG---T--------GAAGGAG-----------C------------------CCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAACTTAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAA----------AAC----------------------------------
droBia1 scf7180000302041:37843-38023 + TAGGG--ATCCC--AGCAGCAGCACCAC-------------------C--------------------------------T--------G-AGGA------------------------CGACAGCCCCAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCCCA----------AACC----------ACGCGCGCGCCTCTCTCCCA--C
droTak1 scf7180000414432:174020-174171 + CGGAG--TAA-C--AG--------------------AGCC----------------------AGCCAA--CGCG-----------------AGGA--------------------A----------CCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCACC------AA-AA------------------------------------
droEug1 scf7180000409533:552689-552858 + TAGTG--AAT-C--------------------------------------------------AGCCCT--CGCGATAC-GT--------AAAGGACAGCCATCCATCCATC-CATAC---------CCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAAATAAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC-----------------------------------------------
dm3 chrX:15403414-15403629 + dme-mir-12 Known_mirbase TCGAGCC-------------------ATCGGAGCAAAGCAATCCGATTGGGCAATAGGAACC--CATTGCCGCGACGCACT--------GAAGGAT-----------CGTC-TGTAC----------GAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AA-CAACC---------AACGCGCGCGCTTC------ACCC
droSim2 x:14568761-14568916 + dsi-mir-12 Known_mirbase TGAAG----------------------------------------------------------------------------------------GAT-----------CGTC-TGTAC----------GATGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AACAAACC---------AACGCGCGCGCTTC------A--C
droSec2 scaffold_73:137837-138051 + dse-mir-12 Known_mirbase TCGAGCC-------------------ATCGGAGCAAAGCAATCCGATTGGGCCATAGGGAAA--CATTGCCGCGACGCACT--------GAAGGAT-----------CGTC-TGTAC----------GATGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AACAAACC---------AACGCGCGCGCTTC------A--C
droYak3 X:14300604-14300625 + CCATC--CTC-A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCATCATCG--G
droEre2 scaffold_4690:11630900-11631082 - der-mir-12 Known_mirbase AGGGC--AT-------------------------------------------------------CATTCCCGCGACGCAGT--------GAAGGAT-----------CGGC-TGTAC----------GAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAAACCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AA-AAACC----------ACGCGCGCGCTTCTCCCACA--C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGGAG--ATT-CTCTCGAGCGGCTCCATCG--------------A--------------------------------------------------------------------------ACACAGCCGC--TGGCAGCGCCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACTGCATGTCCACACCA---------------TCCTGA-------TCATCATCATCG--TSizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................23165841.00658411055249301554363211981
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................22132130.0032130454274442383351643
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................21110613.001061379779161391518243
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2014320.004320510345812181159
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2112201.00220102196050
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2211951.001951219084334
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2411292.001292619292623937
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................2211232.0012329981969263
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................201641.006416634010
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191531.00531316201068
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................241439.004393030744157
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................241432.00432229621275
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................241292.0029219149111211
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191202.002020202000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................231194.0019462373839
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181177.001776975681
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................231172.00172191228167
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................221150.0015031011423
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................221132.001321207131
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211131.001312124131
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................231107.0010770201151
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................201101.001010101000
................................................................................................................................C--TGGCAGCGCCTGTACGGT..............................................................................................................................................19188.008802511502
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................19184.00840492681
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23178.0078078000
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18166.0066059160
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................21162.00627421111
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCC.....................................................................................................................25161.0061255004
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18155.00550203302
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20148.0048039351
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................25137.00371141201
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19137.0037134011
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................22136.0036130032
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25133.0033520161
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21128.0028424000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23124.0024024000
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19124.0024024000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................24124.0024023001
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................20120.0020181001
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC......................................................................................................................23120.0020020000
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................18119.0019019000
...................................................................................................................................TGGCAGCGCCTGTACGGT..............................................................................................................................................18119.0019071110
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................23117.0017017000
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................18117.0017017000
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................21116.0016014020
...............................................................................................................................GC--TGGCAGCGCCTGTACGGT..............................................................................................................................................20115.001502391
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................23115.001519041
..............................................................................................................................CGC--TGGCAGCGCCTGTACGGT..............................................................................................................................................21114.001406800
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................26113.0013030100
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA.............................................................................23113.001306070
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC................................................................................20112.001282020
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCCC....................................................................................................................26111.0011011000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA.....................................................................................................................25111.001107040
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................21111.0011010010
.......................................................................................................................................................AGTATTACATCAGGTACT..........................................................................................................................18111.0011011000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................23110.0010010000
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................2219.00909000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................2518.00815011
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................1917.00707000
.....................................................................................................................................................TGAGTATTACATCAGGTACG..........................................................................................................................2017.00770000
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................2117.00705020
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTA.......................................................................................................................2316.00606000
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................2116.00605010
................................................................................................................................................................................................AGTACTTATGTCATACTACG...............................................................................2016.00606000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................2416.00604200
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................2415.00550000
....................................................................................................................................................TTGAGTATTACATCAGGTACTG.........................................................................................................................2215.00505000
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT......................................................................................................................2215.00505000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT......................................................................................................................2415.00512020
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCCT....................................................................................................................2614.00402002
......................................................................................................................................................GAGTATTACATCAGGTACTGGTCC.....................................................................................................................2414.00404000
...................................................................................................................................................GTTGAGTATTACATCAGGTACTGG........................................................................................................................2414.00404000
...............................................................................................................................................................................................CAGTACTTATGTCATACT..................................................................................1814.00431000
........................................................................................................................................................GTATTACATCAGGTACTGGTT......................................................................................................................2113.00303000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC.......................................................................................................................2313.00330000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAT....................................................................................................................2613.00301020
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................2213.00303000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG.....................................................................................................................2513.00303000
......................................................................................................................................................GAGTATTACATCAGGTACTGC........................................................................................................................2113.00311010
.........................................................................................................................................................TATTACATCAGGTACTGT........................................................................................................................1813.00330000
......................................................................................................................................................GAGTATTACATCAGGTACTGA........................................................................................................................2113.00303000
.........................................................................................................................................................TATTACATCAGGTACTGGTT......................................................................................................................2013.00303000
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................2213.00312000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC.....................................................................................................................2513.00300003
droVir3
CAACA--TTAAT--AGCAGCCGCATCAA-------------------C--------------------------------A--------G-CCG-------------------------CATCAGCATCCGCATCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCCTTTCAA-AA-------------A-------TGTTTATGTTCG--CSizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................231679109.00679109368216236942711939512808536114952963322136111335442234985299922052011168972272546116647152551661931324240646934110732040240113454108252721171851031888021335251713644641441061182552771622301777460250153618502148637724287692955516141882731035365586099848455002018302635
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................221302519.00302519549253100881364157812091873173455420318145446102829211764269551227353042496298564923188425151617238623832182104156901423003001720239310811203067825710178128786548481573512117976705743520817987434648184029233246103693594464104150
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................211153804.001538047252671172726689271938020416318901392178730778573644427799411248165826312055552740891458931440100643134910857951181521076780094640000010001152015421822275565029779637110251112848691115190541034
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24169437.0069437208299963032601175154102021001701111130398621227421343844272195755189191899161201707311147610014533890010020221292551410910421608941473111112813700027025934017564547800100
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................24121920.00219201616747698431080342350000200143872781371635451894031492723146234782097476614504916677291187112973100000022065343231245347510531134210210161181116631387901000
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................20119067.001906744423270102024914202500004525244925212851371058421097338988229680331041140481210000001010023159115652287609320011377154110888011525137301000
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................19112940.001294020511541229111230000006144744151215013121612873681192451430110130114221710172543808239735714127727407720520022221968144212452149125300000
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2119195.00919510892451000000000000000000176893047225013110004000000000000000000000133130009139410900000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................2217583.007583102655332819130139021000071610161281761334262319301621788718654302740013212900000000000000004184414770193520039957245622249135201202
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................2414973.004973442511818381030100043922527823651846259310116713368176331094188884710576812693000100010001000101681171869101113161514230625420315
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................2313381.0033812615372318519612000058361463521729243246232214131323621576447655533311423102131644727112661373084122720215813018614532255
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2212618.002618202015386240200003010328041010122722641463990114010051700000000000100010016173123000154468700000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................2211918.001918102642910105100000016121114124101414107178725033314911035603030019220000110020221420205201045690011511159141100000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................2511584.0015840031331300000316602153298535813399907539881548901661221141881010100000010000000061041298732413106121030023
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................2311580.00158026228652619281120800004511423121128111438237911950195060020112640000000000000000000111518082500015232500000
..................................................................................................................................GCATCAGCGTCTGTACGGT..............................................................................................................................................1911570.00157021628221624112211912214000020101251263532416739860340000715000000000001202100048470000001171334758576800010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCA.....................................................................................................................2511441.0014412015293310010100220211792712114261513040596364044165451210000000000000000000111472200010004000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................2411415.00141516292701634230000541433102391222281585170641581130210124001001014125232202166153310110979569471227400000
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................2011084.001084009990030000000000000020101113102721608000003000000000000000000000101000001211000000
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181966.0096620941027444832510104434235012581619276385920490116001128900000000000000002100122862171100031043010010
...................................................................................................................................CATCAGCGTCTGTACGGT..............................................................................................................................................181938.009386715810116821583100000000002200601117201421028000011300000111000010100014100000001131216183407600000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCC.....................................................................................................................251872.008721813561400030000000002290100111117208117295014000008000000000000000003000221100000001000000
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................181819.0081901220624370500002455234546291810311372127491040600011533000000000000000000112150386400001000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................261735.007350030300000004000001020003838117516614780829180417000000000000000000001000428105171000220021
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC.....................................................................................................................251554.005540020160000000001002115110134488167461620120000029000000000000000000010201300000000000001
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191522.00522005220000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................201468.00468004344100000000000000010001010292503000001000000000000000000000001300000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................231450.00450433931925410200000111006035021310111148014000051900000000001000100102550282800222152210121700002
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................241439.00439001111260000002031110445311119136506714596213102794130000000000000000000005028105100002141022
.................................................................................................................................CGCATCAGCGTCTGTACGGT..............................................................................................................................................201415.0041519230321335313970000000009003236214181728030000270000000000101000000215900000015171617800001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................221358.003581238610230200010000001211101134541117112301000003000000000000000000004403120021111300000
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................191357.00357103521156202000000130019012410294544611022000012490000000000000000000314522700001000000001
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................211333.00333213723200000000762763074310915104234174103100056000000000000000000100000900085448900000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCCT....................................................................................................................261299.002993000001000000010100116010001052613210608000008000000000000000000000100100000401000000
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................181297.0029710148141100100000000005000101022333060000250000000000000001000000761310200000010121
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211279.00279101120450100000000133150240152166172204000024000000000000000000000070100000130100000
................................................................................................................................CCGCATCAGCGTCTGTACGGT..............................................................................................................................................211249.0024913160154178200000000010511533381116175305000024000000000010000000001800000094246100000
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................191226.002261018721000010000000000100000011112303001001000000000000000000010102210100100000010
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................201214.00214106012310010000200100402545371143570900003130000000000000000000400170000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................221206.00206103130101000000000011105123322530133316000001000000000000000002100605422140136310000
..........................................................................................................................................................ATTACATCAGGTACTGGTC......................................................................................................................191196.0019600311900000000000000201211019126804000031500000000000000001003001100000000001100010
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................211184.001840036012100000003611302645100326226240130000212000000000000000000011000000002000000000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC......................................................................................................................231179.001790074000000000000100000000011059313020000040000000000000000000000630000001100100000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................231163.00163001570000000000000000000010000010100000001000000000000110000000000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................251150.00150004002000000001001004222106782611252104413212000000000000000000010200000012012100000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCG.....................................................................................................................251150.0015092101900020000000001140131000923839010000018000000000000000000000700000000001000000
...............................................................................................................................TCCGCATCAGCGTCTGTACGGT..............................................................................................................................................221144.00144403018081520000000004001241341473906000035000000000000000000000600100042100500000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................251133.001330095120000001020010040110333721117021000010000000000000000000131207200034406500000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA.....................................................................................................................251112.001120060020000001100000001001219310921070539241000000000000000000000002042100100030001
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................231110.001100013120100000002101103102236416451402000042000000000010000100000004000015006200000
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................211104.001040180121000000000021015135011331332001001008000000000000000000001200200000020300000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23193.009300750000000000000000010000010240200000000000000000000000000000030000022100000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................21192.0092201800000000000120100320200001552706000005000000000000000000001000000020000000000
.........................................................................................................................................................TATTACATCAGGTACTGGTC......................................................................................................................20186.0086102000000000000000006002000021001030000030000000000000000000100550000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................24185.008589600200000000011101401000003133702000002000000000000000000001200000002509200000
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19174.007400550100000000000000001000010150500001003000000000000000000001000000000000000000
..............................................................................................................................ATCCGCATCAGCGTCTGTACGGT..............................................................................................................................................23170.007010200201020000000200200011346342702000022000000000000000000000100000000000200000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC.......................................................................................................................23169.006945400200000000000000400110106115803000015000000000000000001001200000002002000000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA.............................................................................23165.006500612100000000100200100000037372700000001000000000000000000000001000010000100000
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................22157.005700300000000000000000060110000080301000000000000000000000000002002000001101000000
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................20155.0055261718000000000000000000000000000200000000000000000000000000010000000000000000000
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................21154.005400321000000000010010000000002720100000000000000000000000010000004000010010000000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................24152.005200430000000000000000000002010020000000000000000100000000010000010100000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCC......................................................................................................................24151.005100102110020000000000100201108911404000001000000000000000000010010000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG.....................................................................................................................25150.00503040020000000000000000110130362911000017000000000000000000000100000000301000000
............................................................................................................................................................................GTGCCATTTAACTAACAAC....................................................................................................19146.004600273000000000000000000001000001000000000000000000000000000100000000011304300001
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................18146.004600401000000000000000000000000000000000000000000000000000000000000000021100100000
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC................................................................................20144.00441231010000000010100000002021130200020001000000000010011000000000000057131000000
...........................................................................................................................................................TTACATCAGGTACTGGTC......................................................................................................................18143.004300000600000000000000100210002103010000030000000000000000000001200000000002000000
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................19141.00410043011002000001000020002010261208000005000000000000000000000000000000000000000
........................................................................................................................................................GTATTACATCAGGTACTGGTC......................................................................................................................21141.004100210100000000000000000100002111000000120000000000000000000100270000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA.....................................................................................................................25139.003900100200000011100000010000211711210010001000000000000000000000100300000001000000
..................................................................................................................................GCATCAGCGTCTGTACGGG..............................................................................................................................................19137.003733200000101000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAG.....................................................................................................................25137.00370000000000000000000000001001102230000100000000000000000000000000044401000013135
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21137.003720230000000000000000000000000010200000001000000000000000000000000000000202400000
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22134.003400290000000000000000000000000110100000000000000000000000100001000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT......................................................................................................................24133.00332010020001000000000030002000091601000002000000000000000000002001000000000000000
.............................................................................................................................CATCCGCATCAGCGTCTGTACGGT..............................................................................................................................................24132.003200100002010000000000000000113211300000010000000000000000000001200000000010200000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23132.003200240000000000000000001000000000100000000000000000000000000000050000001000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTAA....................................................................................................................26131.00310010000000000000000010000024201500311300000000000000000000000000100001110300000
.....................................................................................................................................................TGAGTATTACATCAGGTAA...........................................................................................................................19130.00300080000000000000000010000200341401011004000000000000000000000000000000000000000
..................................................................................................................................GCATCAGCGTCTGTACGGC..............................................................................................................................................19130.003023601000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------CAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCAATTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC---------------------------------------------SizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................231150171.00150171532497764114918636965816488
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................221146588.00146588122372329108255197573767
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................21120626.002062618783502102761161191
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................23115187.001518714910581498233
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................21110493.001049310445200451
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2014756.0047564332162136151200
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2214571.0045714436113111010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................2414036.0040366996330475842613
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2413212.003212172110720351020309
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................2212025.002025156291218307
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................2011584.001584158300001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................2411110.00111013525019472
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................2411063.001063601402836745
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................231978.00978735581385132
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191939.00939471281342322
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................221674.006744611111517169
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................201456.0045645300120
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................221339.0033912403215555
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................231299.002996022442009
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191263.0026326200010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC.......................................................................................................................231230.0023010002290
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211215.00215199000142
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181211.002117910599117
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................191155.00155140000123
............................................................................................................................................................................GTGCCAATTAACTAACAAC....................................................................................................191148.00148111001360
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................221146.001461030122515
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................191144.00144942012720
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................181142.00142122002180
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................231130.0013012700030
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................231122.0012212200000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................231121.0012119510924
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20193.009352000374
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................21188.0088341300401
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19184.00848400000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25178.007859102133
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18178.007845105027
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC......................................................................................................................23156.00565600000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23155.00555500000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................24154.00545300010
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22151.00515000010
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCC.............................................................................23144.00441000430
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................25143.004365102110
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................20142.00422000400
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................22142.00429000330
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC.....................................................................................................................25140.004014002420
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................24139.00392600139
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................18138.00383800000
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................21138.003818200180
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................21138.00382702090
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21135.00353500000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCA.....................................................................................................................25133.00338000025
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC................................................................................20131.00311200280
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................21130.00302800110
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................23128.00281900090
..........................................................................................................................................................ATTACATCAGGTACTGGC.......................................................................................................................18127.00270000270
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................22126.00262600000
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................18121.00212100000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................26121.00211520130
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................19115.00151001013
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................24113.0013800014
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA.....................................................................................................................25113.00131200001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC.......................................................................................................................23113.0013400045
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................25112.0012600006
......................................................................................................................................................GAGTATTACATCAGGTACTGC........................................................................................................................21111.00111100000
droGri2
---------------------------------------------------------------------------------------------------------------------------------------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACCAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCCTA----CAAAAC--------AAA-------TAATTACCCGCG--CSizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................2215833.0058335705128
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................2314747.00474737401007
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................211699.0069966534
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................211496.004964960
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................221312.003123120
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................241241.0024120635
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................201227.002272243
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................20159.0059590
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................23139.00392910
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................22138.0038380
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................24136.0036342
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................20133.0033330
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23125.0025250
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................24124.0024240
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................23118.0018711
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................19116.0016160
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................21112.0012120
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................21111.0011101
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................18111.001192
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19110.0010100
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................23110.001064
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................1819.00990
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................2319.00972
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................2218.00880
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................2018.00880
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................1817.00761
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................2417.00716
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................2316.00660
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................1916.00660
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................2115.00550
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................1914.00440
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................2414.00440
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................2514.00422
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................1913.00330
............................................................................................................................................................................GTGCCATTTAACCAACAAC....................................................................................................1913.00330
.........................................................................................................................................................TATTACATCAGGTACTGGTT......................................................................................................................2012.00220
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA.....................................................................................................................2512.00220
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................2112.00220
................................................................................................................................................................................................AGTACTTATGTCATACTACGCT.............................................................................2212.00220
.......................................................................................................................................................AGTATTACATCAGGTACT..........................................................................................................................1812.00220
.................................................................................................................................................................................................GTACTTATGTCATACTACGC..............................................................................2012.00220
...................................................................................................................................................GTTGAGTATTACATCAGGTACTGGT.......................................................................................................................2512.00220
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................2312.00220
.............................................................................................................................................................................TGCCATTTAACCAACAAC....................................................................................................1811.00110
......................................................................................................................................................GAGTATTACATCAGGTACTGGTAA.....................................................................................................................2411.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTAC....................................................................................................................2611.00110
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA.............................................................................2311.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAC......................................................................................................................2411.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAGT....................................................................................................................2611.00110
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................2311.00110
................................................................................................................................................................................................AGTACTTATGTCATACTACG...............................................................................2011.00110
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCTT............................................................................2411.00101
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC................................................................................2011.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG.....................................................................................................................2511.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................2511.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................2111.00101
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAC.....................................................................................................................2511.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................2511.00110
.....................................................................................................................................................TGAGTATTACATCAGGTG............................................................................................................................1811.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................2211.00101
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGGA....................................................................................................................2611.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................2411.00110
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC......................................................................................................................2311.00110
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................2211.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTCT....................................................................................................................2611.00110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTGA....................................................................................................................2611.00110
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................2211.00110
.....................................................................................................................................................TGAGTATTACATCAGGTCTG..........................................................................................................................2050.20101
dp5
TCG---------------------------------------------------------------------CGACGC------------------------------GTT-TCCAG----------GATCCAGCAGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGACCA---------------AGCCAA-----------AGCCAAAG--ASizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................22174199.00741997358586395410897934396021351723181
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................23148802.004880256269546379585645631813142254177520
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................21119037.001903719315180463521453670714719763
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2019342.0093422448158130198772014943602
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2116179.00617935998712265112601
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2413371.00337118229522441142112186333182
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2212705.002705425723415110126150
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................2212606.002606913554310024101379613
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................2311927.001927361167914019126070
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................2011438.00143851416001101140
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................241860.0086052642341172731224210
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191607.00607753978329294170
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191548.00548154311100100
..................................................................................................................................CCAGCAGCGTCTGTACGGC..............................................................................................................................................191483.0048343657264681260
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................231446.004462251261311148201010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................241426.00426031629230943330
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................201287.00287028410010010
.................................................................................................................................TCCAGCAGCGTCTGTACGGC..............................................................................................................................................201236.0023628371731151152
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................231189.00189018700100010
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGC..............................................................................221172.001720609055002100
...................................................................................................................................CAGCAGCGTCTGTACGGC..............................................................................................................................................181167.00167637924219043
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211138.00138013600010010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................221136.00136574627210030
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................231131.001311102193000051
....................................................................................................................................................CTGAGTATTACATCAGGTACTGG........................................................................................................................231121.00121093118000180
................................................................................................................................ATCCAGCAGCGTCTGTACGGC..............................................................................................................................................211112.00112037403163040
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................251108.0010805122116212040
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................20191.0091453349000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................22186.0086027560202431
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................18185.0085247202721130
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................23184.00842372012220000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24182.00821194061033000
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19171.007116330000040
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19171.007107100000000
....................................................................................................................................................CTGAGTATTACATCAGGTACTGGT.......................................................................................................................24170.007005481420010
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18163.006305910101010
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21160.006065100000030
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC.......................................................................................................................23151.005100500000010
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20150.005004620110000
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................19145.004503430314000
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18138.0038019112110040
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................18137.003713330000000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23134.003402900000410
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22132.003202821000010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25130.003001820020440
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................24127.002708100105120
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................21126.002602100000050
...............................................................................................................................................................................................CAGTACTTATGTTATACTACG...............................................................................21125.002501911200020
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................21123.002307000004120
..............................................................................................................................................................................................CCAGTACTTATGTTATACTACG...............................................................................22123.0023012000000110
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................22122.0022011101000000
.......................................................................................................................................................AGTATTACATCAGGTACT..........................................................................................................................18120.002002000000000
....................................................................................................................................................CTGAGTATTACATCAGGTACTG.........................................................................................................................22119.001901600000030
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTA.......................................................................................................................23118.001805000100120
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAA.......................................................................................................................23117.001701000000160
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................18117.001701700000000
...............................................................................................................................GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................22117.001701300004000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................25116.00160800001070
......................................................................................................................................................GAGTATTACATCAGGTACTGGTGT.....................................................................................................................24115.001501220010000
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................19115.001501000210020
............................................................................................................................................................................GTGCTTTAAATCCAACAAC....................................................................................................19115.00150690000000
.......................................................................................................................................................AGTATTACATCAGGTACTGGTG......................................................................................................................22114.001401400000000
....................................................................................................................................................CTGAGTATTACATCAGGTACT..........................................................................................................................21112.001201200000000
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT......................................................................................................................22112.001201200000000
.................................................................................................................CCAG----------GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................26111.00110100004060
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................21111.00111910000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................22111.001101010000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTAA......................................................................................................................24110.00100100000090
..................................................................................................................CAG----------GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................25110.00100000005050
......................................................................................................................................................GAGTATTACATCAGGTACTGA........................................................................................................................2119.0090701000010
........................................................................................................................................................GTATTACATCAGGTACTGGTT......................................................................................................................2119.0090610000020
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGC.....................................................................................................................2519.0090090000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA.....................................................................................................................2518.0080300000320
.....................................................................................................................................................TGAGTATTACATCAGG..............................................................................................................................1618.0080000000080
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA.....................................................................................................................2518.0080310200020
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................2617.0070700000000
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGCT.............................................................................2317.0070330100000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC.....................................................................................................................2516.0060201001020
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAAA......................................................................................................................2416.0060000000060
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................2416.0062400000000
................................................................................................................................................................................................AGTACTTATGTTATACTACGC..............................................................................2116.0060600000000
................................................................................................................TCCAG----------GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................2716.0060100101030
.....................................................................................................................................................TGAGTATTACATCAGGTTT...........................................................................................................................1935.331601400001010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGTTT...................................................................................................................2715.0050300011000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT......................................................................................................................2415.0050300011000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGCC.......................................................................................................................2315.0050041000000
droPer2
TAAC------------------------------------------------------------CATT--CGCGACGC------------------------------GTT-TCCAG----------GATCCAGCAGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGACCA---------------AGCCAAAG-----CCAAAGCCAAAG--ASizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................22116404.00164041311554119016998275
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................23114265.001426548783481386113513001609
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................2116059.006059196521153152133314
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2111331.001331613231001
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2011289.0012897610952491966
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................221695.00695366713354
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................241658.00658849034402660
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................201454.0045414521000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................221366.00366105198161937
..................................................................................................................................CCAGCAGCGTCTGTACGGC..............................................................................................................................................191347.003471210227296
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181178.001781251336022
.................................................................................................................................TCCAGCAGCGTCTGTACGGC..............................................................................................................................................201158.0015803126146
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191128.0012861572152
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................241112.00112215727304
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................241108.001081906362
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................23195.00952801615
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................20174.00740730001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................23159.005942123011
...................................................................................................................................CAGCAGCGTCTGTACGGC..............................................................................................................................................18156.0056261400133
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................23156.005624163661
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................19151.00510510000
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................21133.00330320100
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23131.00310300100
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................19129.0029698024
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................22127.00270260001
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18125.0025066238
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19125.00253193000
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18123.00234171001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................22123.00238130110
...............................................................................................................................GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................22121.00210200019
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19121.00210210000
................................................................................................................................ATCCAGCAGCGTCTGTACGGC..............................................................................................................................................21121.00210220116
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21120.00201190000
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20117.00170610100
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGC..............................................................................22116.00161132000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24116.0016233026
....................................................................................................................................................CTGAGTATTACATCAGGTACTGG........................................................................................................................23116.00160160000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25114.00140121010
....................................................................................................................................................CTGAGTATTACATCAGGTACTGGT.......................................................................................................................24114.00140100220
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................23114.00140140000
..........................................................................................................................................................ATTACATCAGGTACTGGG.......................................................................................................................18113.00131201000
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................21111.0011090011
....................................................................................................................................................CTGAGTATTACATCAGGTACTG.........................................................................................................................22111.00110110000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................2518.008021005
.........................................................................................................................................................TATTACATCAGGTACTGT........................................................................................................................1818.008710000
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................2217.007061000
...............................................................................................................................................................................................CAGTACTTATGTTATACTACG...............................................................................2117.007070000
..........................................................................................................................................................ATTACATCAGGTACTGGA.......................................................................................................................1817.007601000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................2316.006060000
..........................................................................................................................................................ATTACATCAGGTACTGGC.......................................................................................................................1815.005500000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT......................................................................................................................2415.005220010
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................1815.005040010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................2415.005050000
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................1813.003030000
......................................................................................................................................................GAGTATTACATCAGGTACTGGG.......................................................................................................................2213.003120000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTAA.....................................................................................................................2413.003030000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA.....................................................................................................................2513.003030000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................2513.003020100
................................................................................................................TCCAG----------GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................2713.003000003
........................................................................................................................................................GTATTACATCAGGTACTGT........................................................................................................................1913.003210000
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT......................................................................................................................2213.003030000
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................1913.003020001
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGCA.............................................................................2313.003021000
....................................................................................................................................................CTGAGTATTACATCAGGTACT..........................................................................................................................2113.003030000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGTGCT..................................................................................................................2812.002001001
............................................................................................................................................................................GTGCTTTAAATCCAACAAC....................................................................................................1912.002020000
.........................................................................................................................................................TATTACATCAGGTACTGGTT......................................................................................................................2012.002020000
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................2112.002010010
...................................................................................................................AG----------GATCCAGCAGCGTCTGTACGGC..............................................................................................................................................2412.002000002
.........................................................................................................................................................TATTACATCAGGTACTGGG.......................................................................................................................1912.002200000
...........................................................................................................................................................TTACATCAGGTACTGGTT......................................................................................................................1812.002110000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................2612.002020000
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................2212.002010100
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................2112.002101000
droAna3
TGGAT--GTT-C-----------------------------------------------------CCC--TCCGATAA-AAAAAAAT--GAAAAT-----ATCC-TGGAAA-CACAC---------TCGACAACTGGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCTCC----------------------------------------------ASizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................22119358.001935815791155276328856755
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................23118341.001834181331332272237448601370
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................2114914.00491439622215243401271
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2012227.0022271864108821101125
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2111603.00160314021843356
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2411350.001350813488127250104
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................221807.00807721123163817
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................231470.004702441202392
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................201317.0031731510001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................221308.00308153132611015
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191204.00204139530516
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................231157.001577940017147
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................241154.0015481468496
.................................................................................................................................ACAACTGGCGTCTGTACGGC..............................................................................................................................................201149.00149211161155
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191122.0012212110000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................221116.0011683290112
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23180.00807900010
..................................................................................................................................CAACTGGCGTCTGTACGGC..............................................................................................................................................19179.007925103482
...................................................................................................................................AACTGGCGTCTGTACGGC..............................................................................................................................................18177.007753101337
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................24174.007443211126
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................20170.00706900100
................................................................................................................................GACAACTGGCGTCTGTACGGC..............................................................................................................................................21155.005512001402
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................18153.005310249460
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25148.00485329011
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................21147.00474600010
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................19141.004113212212
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24139.003912613710
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................22136.003612171402
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................22134.00341870153
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................20133.00330330000
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18132.00321314185
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................21131.00311900066
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18131.00312370001
....................................................................................................................................................CTGAGTATTACATCAGGTACTGG........................................................................................................................23128.00282140111
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................23128.00281061713
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................21127.00272510010
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19122.00221723000
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20122.0022952060
....................................................................................................................................................CTGAGTATTACATCAGGTACTGGT.......................................................................................................................24121.00211331310
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................25118.0018310365
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22117.0017970010
...............................................................................................................................CGACAACTGGCGTCTGTACGGC..............................................................................................................................................22116.00164101100
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21116.00161310110
..........................................................................................................................................................ATTACATCAGGTACTGGC.......................................................................................................................18114.00140140000
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19113.00131300000
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................21111.00111100000
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................18111.00111010000
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................22111.0011380000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23110.0010910000
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................21110.0010302050
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................1918.008300050
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................2218.008501110
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................2318.008710000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................2617.007034000
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................1817.007700000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC.......................................................................................................................2317.007070000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG.....................................................................................................................2517.007200050
..............................................................................................................................TCGACAACTGGCGTCTGTACGGC..............................................................................................................................................2316.006200040
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................2316.006510000
............................................................................................................................................................................GTGCCTTTAATCCAACAAC....................................................................................................1916.006060000
....................................................................................................................................................CTGAGTATTACATCAGGTACTG.........................................................................................................................2215.005500000
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT......................................................................................................................2214.004400000
........................................................................................................................................................GTATTACATCAGGTACTGGC.......................................................................................................................2014.004130000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................2414.004310000
......................................................................................................................................................GAGTATTACATCAGGTACTGC........................................................................................................................2114.004130000
....................................................................................................................................................CTGAGTATTACATCAGGTACT..........................................................................................................................2114.004310000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC.......................................................................................................................2313.003100200
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTGT....................................................................................................................2613.003000021
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................2513.003110001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................2413.003100200
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA.............................................................................2313.003300000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTAA.....................................................................................................................2413.003030000
droBip1
TGGAT--GTA-C-----------------------------------------------------TGC--TC-------------------------------C-TGGAAAACACAC------AA-CCAATGAATGGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGGAG--GAG-C-------------------------------------------------------------------------------------------------------------------------TCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGCCAAA------------GCAACTAAGCCAACA---------------CG--CSizeHit CountTotal NormTotal
No Reads
droFic1
TGGAGCA-------------------GT--------AGCACTTCAATC--------------GGCCCT--CGGGAA---GT--------GAAGGAC-----------CCAA-T---CGAA---AG--AAGAGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTAAAATCGAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAACCA-----G-AACC-----------------------------CG--ASizeHit CountTotal NormTotal
No Reads
droEle1
TGGG---------------------------AGCAGAGCTATCCAACG----AGTAGGGAT---CCCT--CGCGACG---T------GAGAAGGAA--------------------------CAGCCCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCCTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCAAAATA----------CA--------------------------AAAT--ASizeHit CountTotal NormTotal
No Reads
droRho1
CGCC----------------------------------------------------------ATCCCT--CGCGACG---T--------GAAGGAG-----------C------------------CCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAACTTAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAA----------AAC----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TAGGG--ATCCC--AGCAGCAGCACCAC-------------------C--------------------------------T--------G-AGGA------------------------CGACAGCCCCAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCCCA----------AACC----------ACGCGCGCGCCTCTCTCCCA--CSizeHit CountTotal NormTotal
No Reads
droTak1
CGGAG--TAA-C--AG--------------------AGCC----------------------AGCCAA--CGCG-----------------AGGA--------------------A----------CCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCACC------AA-AA------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TAGTG--AAT-C--------------------------------------------------AGCCCT--CGCGATAC-GT--------AAAGGACAGCCATCCATCCATC-CATAC---------CCAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAAATAAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCGAGCC-------------------ATCGGAGCAAAGCAATCCGATTGGGCAATAGGAACC--CATTGCCGCGACGCACT--------GAAGGAT-----------CGTC-TGTAC----------GAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AA-CAACC---------AACGCGCGCGCTTC------ACCCSizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................2311389268.0013892688696413138252354246378125167116341614191701634177799490146233614861101184190246154271152105343818347891069804130306281421236707136454933111181204030487637029180004826319237900000000000000000187318591432146812913422846277464411512125529814165389540272192813374623123644353871617401622321464143183526476295917441100207421561872334468914850218512111769137710478298845023824216380538455842221721555142349411032120571426911123130272821525374322629135740880363637202416201325080167739175622121125126295179919621587218822263018333131760411459130421142555114912561473763334358364526425139351252371977675632144723823451014236400031722375064976233144716722221145392532226351883400702551778459465044425338681156196277132644146120816277817216113423051152529752346711660454175065693411860274165625696736143271435923047652942726399826663873821537787166979130999814302477158374094250810681362205395193243349925414241123607266114412680671484319594218310881749140655013435048039521415536161534447220315355319127371955475523283711577179
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................211307708.003077081030131341924883471088222210240530103625028650061053660936185111427577115690010366331541957313060567912096121227136934153434120748000031772395499000000000000000004294543663691549658216426134196142497225440374701721267171252741844422618215963220258328261821305442773102222748927138304153478260218233070231036024631336238310710656015710535287011412465311424209716381446140139684017729447470000010074456748660406115164203668100939316744843001405501707128278436544144211282368712340310044861127541813041871427650411633133610725324099551498140552657004102900002583091704180392851388317032752915907819024119216414582126620822136338799939999193336291312967589602315011807516709481291313151833840244048446573547533179532031757467131078285252601412127844961145929883977639912141620942129888623861250742268306317243540
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................221274095.00274095308144163620171003556511811161071103132120200201200000104329730511586305337351963268222522484249398110822413541570007103588500000000000000000404362296250283744846518420639485290133156416158310110109554492521203215545552374618559228662430664794291273115479715311265321872262844721216163548310452635563752393476641951110773412535361177174125650053937041011132000107791187074671017313297984635545357027650001576106935020682621071193828187320923211110827600650210143257611663434167767440351184015414228785010512238643257285455009775050541473452517121303748334612711829608565556511951703473228488144626991699152982061195133127615083213403493682999711255422683913688276321547212151235457376012463054876462471265147441226790297941559438844563105235933
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................201122467.0012246700006137281383441343366008304191011600004215223705553456115111126188782158130649111769592301581371276800031224570000000000000000003403542732651767986616918417213623516232232269338171534856475523566115124118915302272382817514459839911323305784528188117649798152237403326726045538233328391000812111279237322137167817109613272620001170000011113706873876242440316935137500610267286305204340020304662370000031900039032322516911694528265302728436501931642034560111200003423019579181579231686432341783535595771261863524344126244103534523342022412825431484624615001121151211136931244462629164369536022356360122220101444348893941731662845328228243371388108012228826528119313789101004
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................24118018.0018018000041000026330010210415162000000000003187304329177521915615369367284193311600000000000000000000000111161111106132217191216912105066152527544311641560214602762194720219175020101819420221233200001014114002302172861117188644191935240000000000049750487126939608822573400000061912602872120019733320000005241013050000214909884857550287912197005782677372022210038270682351321788827215098012172004181376124191100424224528168392472016903111243484735287553852414634124544565333316582127914500002005528813454464196321175
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................2317289.0072890000010029034000000085242000000000004488731311941988515133101079522718410000000000000000000000051240531615021110621041710842105148120211328332405102103021204026200002001200010027263624338316122210000000000002623020004170109125210000040482032800025320100000916000000020265918111684931519117260000320023140941137010453236719311501119503291524000418501725740939194190412641119141220240291361833836457554937191501815386315201212113391011432135339
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................2215788.0057880000210030021004001001742930000000000061541121129344178953193777000000000000000000000003667211435211019466811345045902151724465353883511313361290100000101022122600003221400220038182218201281411000000000003831023005330100240423000001140126156710128212702000001414001000000163752414069123198355526253000200003100423017530211303117102340268110140015701361111046580834016162025192012126186812156124217001517280023001000176331371639243720931811
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGATC.....................................................................................................................2515598.005598000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000039611636000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................2415236.00523600003312230300000000143000000000000827161715317719922261122266514900000000000000000000000874322001421240343239117172869445231590050137612910139041010006041530000031390381111262523272953614813000000040001831012006260811102320000023104194111000202461300006210100000002215914533516033045340024216041810018465009601300412774025330000300443007421000181114321488550000203104071752133980414428410111926202010000005623855000140
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................2215054.00505400000202621120000000030107000257162810010145682933317197253024940001036890000000000000000064775460141677822131311830332166009363413767812752915670104070113033522010002201100001120177223667810100000001011100100223071771741780000031811020003093000004400000154210221437385541351369741912496831267000023405015113110441013413201503214453103545202380335204251641108500111181150162184457327423541822466550210121131100431120
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................1914970.004970000000000000001201004515340000633437320459811126120635591295000884716000000000000000003432442414013115017630436157128713143531470377319451294211550184010110081024241141460010602011012137149352202000000000003894038301839335665740130000097105929000058027100100101000000000392012252290108311210354445302215001202215110217439181371413402867061111003201191134251991953057131316314613532201122361721113903574311110000130374751319111463030313
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................2314000.004000000002000010200000002229000000000000450493675559517671334992113930000000000000000000000000212020670081200100229244171220024302123993120011000103060142002410106011000101911618282592000000000001211012000101206112766000001531615810050810100022010002000537429620428245198616100000001670620540483013370210500762037822120561663278281301177037110691213181614232641482540182117181025103034101310041626523343033
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................2313903.0039030000563415105920000000211240200000000022037715323189345222618924551900000000000000000000000210547084401081112412915723137212800610936413870400103030108100020071000230017161113164913162000000000001323016006201601701710000011349333000130470110002300000000017381499461134387101737020700013119003704100104661140300023008130211310300107334847713602320651704271161101121061313102129006797311100100812475151040032262
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................2413728.003728000000000000000000001232000010000001646143254813354716717257817500011247191100000000000000000051211002120001000011021001000105000000020030100110000000000010000010062018141557112425140010000000003020003031103100000272111000201200000012000000000281372263296014283352363200300004714051151282119292024790301612002002000120013040067021111710102101213000114931151004220001320123915150
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2212993.0029930001000000100000000010023000011719000512354318412281811216315300040416000000000000000001420102402348200615111112817221071053213150340351216072000212061810000005205010001101928142636751020000000010025350181022029115231600000131988201012016000000270000002001854844329148106572237127111100008306091265261235611430202125173061720110531231481266878539847301142822344334106723194352372938533430041009356632133260798
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................1812602.00260200000000000000000010108040000000000069116212211114112191000000000000000000000001076110023000000000001013004000000000000000000000000000000000020010200193525222661710000000000100120000010100000000000732376000340407102117000000000237413261184003400010000000029110101000200401021020021211153020003014632163022801420021025757124514415147578008192302100000000343080120200331
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................1811839.001839000000000000000000005180109000194132104044503032914533101119430005442600000000000000000883412001104443551282710815112314161011031741100330200001100257213306000000200000611356172281000000001001140811122414970340001035714738200260730000003200000000033651612123225400100000000650611110850111300204004110228501500311051114150343061017231573212310127003206231110000000042516553124000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................2111203.0012030000000111010000000000035000070000010200001400001052020002117100000000000000000253223290163161305260081012480021011533529211136500030100000001100000010000000004333114000001000000019010014348613800100141100002000000001100000030028105612945942113557710900003201012630110048030010210122044284620156010921000510200023501100412140170022031150230311000021201324120
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2111194.00119400000200030110000000000530000000000101221013001000282100027209000000000000000001114512010026623211210311020001112276185667020001004001012204042010020270000000351312000000000000000914012002182140111160000001040100001050000001000000000089223115106112501923735839000000000020040010000001001200001000001301212011511300012002400001903000050585010000000002000100006000
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................2111194.0011940000340002010000010011251410000000000031232111644355232121407000000000000000000000001000111800033916300131225920137618004111212233026303000000002009140010000110010005910131058020200000000000510300010010000000000161562000604000000350000000000150203310021000200000052023113220160001030160420001561120001202021001000521900000111250702300000000000000000042000003000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................221830.00830000038133101740000010010240000000000010000046000210241100000000000000000000000001023000101618602094000743130022320030043092000200051530004002110000004442370000000000000001380801013030503100000412017000050100000001000000000061151752125139543000014311000000100006001102000000000000410000015010101001103113040003200130100020221102000000131011410121100
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................191801.008010000000000000000200022020010000000012231022212213115300000000000000000000000011471000500000000000000000000000000000000000000000000000000000400010041057912146000000000000000200000000000000000387120001604000000030000000004109200030010100000004390200000100100000000000100010001062167594131302000001211964122721103350016501220001000424060100100125
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAC.....................................................................................................................251800.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000010000000000000000001000000000000020000000000000000000000100000000000000000000000000000000000000000000100013010000476309000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................251719.0071900000002000000000000001000000000000001110411112021211000000000000000000000003221074051500011010032010201000001122002000000000000110000210300045734201010000000000000002601000101040000000049522000102000000350000000005631546029245469371161000000010010000151010000000002000000000000509141900000130080000031733000000226100000000000000110200010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................241656.006560000000000002000000000110000000000011275425151231422117320000000000000000000000001220000200211201433400140100000000010201100000000000000002001000200214521501400000000000001000005020011000000111110000080600005001000000000629012111183619181519000018700530310011930100003100013200041010004112137153600100101204111091723221000584200000000001022502012100
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................211588.0058800009190236310600000000004600000000000023010600121102701000000000000000000000000110117300303507802282111131364000128115172256010000100020100000000000100004415062000000000000002101001701000000000048211200012060000000100000000014710120100500005000110000000110110100001000000012200100130315030100020111101016300003000000100000000000001010002000
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................201543.005430000000000000000002000030000000000000000022010002114000000000000000000000000220200043000001100000421211000013000100200000000000000010022011501000015148171000000000000000100000011000000000008120000200000000020000002007122420210002000000001100000000000001000000000001000000966121204000000001031000050100001002200000010000100010100000263
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCATC...........................................................................251502.005020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363139000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA.............................................................................231495.004950000000000000000000000140000000000000001013000020010000000000000000000000000223500022009003000010002000010216000000001300010100201000000000000000021020000000000000000310000000002120000000412000000200000020000000001011061144530591146341100811001100004001000100100010410023132000000000040001101001000103512011103410101000100000020000110100
.....................................................................................................................................................TGAGTATTACATCAGGTACTATC.......................................................................................................................231482.00482000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046316000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................201467.00467000001000000000000000101800000000001001010281010116401000191620000000000000000041202101310610201176210061364112811111301052000001040540000300141000001442291000000000000001312030013101407041000003702100011050000000100000000053321061211600000000000000000210300010000000100801000019002131800010000000100011000100000000000000000001000200004000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................221442.0044200000400010100000000020150000000000010032125600101071121000000000000000000000002101020001011020000112000044000022100004010000000020310001000110010007051560003000000000003403000101000020000063130000205000000000000000006711171024381571531000021000002200003103010100100000005000000170114240000002212010001300100200000000000000001111011009010
............................................................................................................................................................................GTGCCTTAAATCCAACAAC....................................................................................................191381.00381000000000000000000000002000000000000000000010000000000000000000000000000000045220014562100150102003430007202015701300534100000000000000000000000000000000103020000000000000000000021000000000000000000000000000000000000000000175244154198235200001000000000000120000000000000010000000000000010000009000000000000010000000000000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................211379.0037900002700011310000000000170000000000000120059101000224110000000000000000000000000000300000120820003140050019100017001002500000000000000000000010000000233208100300000000000350100060001000000005301000004030000000100000000022400063000200009200000101000200300000020000000120000001161505060000000030000018300201100000100000000000000101009000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................251366.00366000000000000001000000000000000000000500301151212244710000602850000000000000000000100000200100000100000000000000000000000000000000000000000010000100211218100200000000000000000000000100000000111000000100000000000000000113204385730710000000101101117100141040100030000100000000040104005300013032101212011000003144003901210041213212313250
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211356.003560000000002100000000000040000000000013111016211233251000000100000000000000000021100071003124162123317654743029113201101000000000000000000000030000000403543012200000000000120000050101000000001103200005020000002000000000011010259102300000000210101100500210010020011000320011061812543100000001101000002000000000020010001000011200101010011
.....................................................................................................................................................TGAGTATTACATCAGGTACA..........................................................................................................................201317.00317000027000002300000000004000000000000000000000000000000000000000000000000000010009200000138011600011000000177000005002001500000000000000000000000000000000000000000000000000000000020000000000000100000000100000000000000000000001100000000001000000000001001000000000000001000000020001000000000011100000000000000000000000000001010010002000
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................201275.0027500001200013121000000000900000000000000000000000001010000000000000000000000000000020001023401520112470042230001238200014900100000000000000000000000000011001000000000000000000200000100000000002100000000000000000000000000001000111000000000000001100000000130101000000003000000020001000000000010001010001100100000010000000000021110002000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................261272.0027200000000000000000000000000000000000001000101020300120000000000000000000000000000000003000010000101000000000100000000000000000000000000000000450012031030010000000000000000000000001000000011110000010000002500000000042002881492914963000000000000000000001000000000200000000000240123120000000002000003911000000023000000000000001001000000
.................................................................................................................................AGGAGCAGCGTCTGTACGGT..............................................................................................................................................201265.0026500000000000000000000012000000000000010000100000000400000000000000000000000000000000000050000000000000000004000000000000000000000000000000000000021112302040000000000000000000000000000000000300000001100000110000000004441822113001100000001000001001001010102101400012000010000000000000000004271401801071160089120151213121041120012003016100
..........................................................................................................................................................ATTACATCAGGTACTGG........................................................................................................................171199.0019900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046414548005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014
...................................................................................................................................GAGCAGCGTCTGTACGGT..............................................................................................................................................181180.001800000000000000000000000100000000000002000001000010100000000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000001121020000000000000100000000000000000000151000101000000000020000006231000000010000100001000011003000130200100121000410001000000002000010000440020183722630063130001001000001120010428000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC.....................................................................................................................251168.0016800000000000000000000000000000000000000000010100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100102000000000000000000000010000000000001100000000100000000000000001006026820200006160000000000002000000000000100000000000000000000000000000000001100100000200000000000001000000000000
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................211167.00167000000000000000000000000000000000000000000000100120010000010000000000000000010192130000100000000000000010001011000000000000000000000000000000000000030000000000000000000000000210102060000004100100000000000000000000000010011419146278100200000000000000000020010000010000000001000002100000000001000001000000000103001000000000000000000100
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191166.00166000000000000000000000003000000000001000000000000000000000320000000000000000000120000000320200101150024173000201200000500000000104002000200000000000000100000000000000000120000060602040000002000000000000000000000000000010011841003000000000000000002102010001000000001000000040100010000010000000010100000000000000000000000010020003001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC.......................................................................................................................231157.00157000000000000000000000000000000000001125201250016024100400000000000000000000000000010102000202001011000000010000000001000000000010100000000000000004120130110000000000000102000000000000000000010000200000000100000000000002010000000000200000000000020001102003002100110001000604030200000000011101007300700000010000000000000000000000001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................241153.0015300000200010000000000000000000000000000100000100002400000000000000000000000000101041001000001001070001000000000000000000000000002000100000000020002112100000000000000001010002000002000000092700001010000000100000000013022561057211000000000000000001001000000000000000000000020204100000000012010010300000000112000000000001010200102100
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTG.......................................................................................................................231138.001380000000000000000000000000000000000014032121902161725060000000000000000000000000000001310000000020200000000000000000200000000002011000000000000000122002000000000000000000000000000000000000411000000000000000000000000001700000000000000001000000003101000000000010000000000070502030010100000112001601010100000000000000000000000000000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGT..............................................................................221133.0013300000000000000000000100000000000000001000000001000000000000000000000000000001011000010002010000000000010000000000000000000000000000000000000000000000100000000000000001000001000000100000000100001010000000000000001000010110000110000000040000100000000000000004000012100102000505001400000000131230203401011001021120101003100001600000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................241133.0013300000000120000000020000000000000000000000030000001400000000000000000000000000000000000002000000010000000000000000090000000000000000000000000000001010400000000000000002020000001001000000030100000010000000000000000001002423321000003624000001000000200000000000000003000000000000010000011000000000000100000000000000000000000000001020
...........................................................................................................................................................TTACATCAGGTACTGGT.......................................................................................................................171127.001270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143621000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................231126.00126000000000000000000000021000000000000000000300000201000000000000000000000000002110000001000000000100000000040100000000201000001000000000000000200001103000200000000000000000000010000003000100000020000000000000000000100054143015100000000002102100101000400000330000510020000001010010000001110201400050001403001000010000000101121100
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC................................................................................201126.001260000000000000000000000000000000000100000000000000000000010000000000000000000577800034011001000001000000000170201101000000000000000000000000000000000000000000000006000010000000002000000000001000000000000000000000001000001222000100200001000015101000010000000040001510120010000020006100000100401001000000000010100000000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGT.............................................................................................................................171123.001230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843330022130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CCAGTACTTATGTCATACTACG...............................................................................221121.001210000000000000000000000000000000000000010002000000100000000000000000000000000134303002002001000022000100001502000010000000000000000000000000000000100000000000000000000101000100101010000020000000000000000000000000000500816104318300200000001001010000010300100110001000000000020010010010000000100000010000000000040000000010000100000
droSim2
TGAAG----------------------------------------------------------------------------------------GAT-----------CGTC-TGTAC----------GATGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AACAAACC---------AACGCGCGCGCTTC------A--CSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................221153533.001535332593794771713092878264649436510134672427015082736167959108
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................231146634.00146634192470443237844024819183028029302954041505416544341076811195013
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................21166231.00662315602123881154484031385220128728113321353341711312108003
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................22139669.0039669126442648424512800161165280498000
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................20132503.00325037776961831893411917843475653149109196842221
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................19122640.00226401455217242834172291241161231283016011
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18113660.0013660240312552785174225243201011
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................2215382.005382219231125070065117001000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................2413299.00329917491711800645738618578432027429000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2412915.002915188747464230039232668991324410440000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................2311716.001716182882499460030281332805000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................2311612.0016121552521412500197231554333131475000
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2111546.00154611621105119195861172673345001
.............................................................................................................................................................ACATCAGGTACTGGT.......................................................................................................................1511124.00112400000010391111000000
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2211042.00104214272675188185842707021001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................2311023.001023178444243440022333640415000
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181971.0097143425221821323846803000
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................201965.009654604871800000000000000
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................201700.00700112213672701400006009000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................251635.006351352200424816924480786000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGC..............................................................................221567.00567373112417454760010498786001
.....................................................................................................................................................TGAGTATTACATCAGG..............................................................................................................................161474.00474000000101513445000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................261458.00458011800232518219660115000
.....................................................................................................................................................TGAGTATTACATCAGGTACG..........................................................................................................................201455.004551612821010000000100000
.....................................................................................................................................................TGAGTATTACATCAGGT.............................................................................................................................171432.004320000001400426000001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................221350.00350142623200106979750250000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................241325.0032591017142511151002500000
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................201233.0023302261100000211001000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACG...............................................................................211216.00216171336723106001921766000
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................181197.0019714011801000000000001
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191189.0018953040129900001002000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................241184.0018410040045851012144000
..........................................................................................................................................................ATTACATCAGGTACTG.........................................................................................................................161147.001470000002100144000000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTAC................................................................................201146.00146122130108700002101000
...........................................................................................................................................................TTACATCAGGTACTGGT.......................................................................................................................171142.001420000001202137000000
..........................................................................................................................................................ATTACATCAGGTACTGG........................................................................................................................171135.0013500000012522113001000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................241135.001354685110000020000000
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................191132.001322513505500106000000
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................211103.0010311730170000000002000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTA.......................................................................................................................23189.00892852010001121003000
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................21178.0078790560000002103000
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................21173.007391004000157150022000
...................................................................................................................................GAGCAGCGTCTGTACGGT..............................................................................................................................................18172.00723626200000007100000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCCG............................................................................24172.0072000066600000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24172.007210280600452110312000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA.....................................................................................................................25171.0071010000228520348000
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................20168.0068311552021001002000
.................................................................................................................................TGGAGCAGCGTCTGTACGGT..............................................................................................................................................20167.00670201000000131050000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTA.................................................................................19167.0067000059101005001000
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................21167.0067427296001109404000
........................................................................................................................................................GTATTACATCAGGTACT..........................................................................................................................17160.0060000000110058000000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCC.............................................................................23159.0059301050300001001000
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18149.00490609205100214001000
............................................................................................................................................................TACATCAGGTACTGGT.......................................................................................................................16148.0048000000050142000000
..........................................................................................................................................................ATTACATCAGGTACT..........................................................................................................................15145.0045000000010044000000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCA.............................................................................23143.00430002001317002315000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................25139.0039200033010002100000
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19138.0038000820080014015000
.........................................................................................................................................................TATTACATCAGGTACTG.........................................................................................................................17137.0037000000000037000000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23135.0035460230000000002000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT......................................................................................................................24134.0034820500001000000000
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19130.0030160185000000000000
...........................................................................................................................................................TTACATCAGGTACTGG........................................................................................................................16130.0030000000670016001000
..................................................................................................................................GGAGCAGCGTCTGTACGGT..............................................................................................................................................19130.00301112111000000004000
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................18130.0030151480000010001000
............................................................................................................................................................................GTGCCTGAAATCCAACAACC...................................................................................................20130.0030000030000000000000
...............................................................................................................................................................................................CAGTACTTGTGTCATACT..................................................................................18129.0029210016210007000000
.....................................................................................................................................................TGAGTATTACATCAG...............................................................................................................................15129.0029000000000027000101
.......................................................................................................................................................AGTATTACATCAGGTACT..........................................................................................................................18128.002874056100004001000
................................................................................................................................ATGGAGCAGCGTCTGTACGGT..............................................................................................................................................21127.0027430100000020116000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAA.......................................................................................................................23125.0025120000101010019000
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................22124.0024212030016000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC.......................................................................................................................23122.002265800000003000000
.........................................................................................................................................................TATTACATCAGGTACTGT........................................................................................................................18120.0020614000000000000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC.......................................................................................................................23120.0020414000000000101000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................24120.0020000107000001101000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................23120.0020000124000101002000
....................................................................................................................................................TTGAGTATTACATCAGGTACTG.........................................................................................................................22119.0019000811000000000000
...............................................................................................................................................................................................CAGTACTTGTGTCATA....................................................................................16118.0018000000100017000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAAA......................................................................................................................24117.0017000000001000313000
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22117.0017010120020011000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTAT........................................................................................................................22116.0016411000000001000000
...............................................................................................................................GATGGAGCAGCGTCTGTACGGT..............................................................................................................................................22116.0016200000000001112000
...........................................................................................................................................................TTACATCAGGTACTG.........................................................................................................................15115.0015000000000015000000
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................19115.0015030200000010000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTAA......................................................................................................................24114.001439000000200000000
..........................................................................................................................................................ATTACATCAGGTACTGGG.......................................................................................................................18113.001306600000001000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................25112.001211000012020005000
........................................................................................................................................................GTATTACATCAGGTACTGT........................................................................................................................19112.001266000000000000000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23111.001110090000000001000
..........................................................................................................................................................ATTACATCAGGTACTGGC.......................................................................................................................18111.001104100000006000000
.........................................................................................................................................................TATTACATCAGGTACT..........................................................................................................................16111.001100000011018000000
droSec2
TCGAGCC-------------------ATCGGAGCAAAGCAATCCGATTGGGCCATAGGGAAA--CATTGCCGCGACGCACT--------GAAGGAT-----------CGTC-TGTAC----------GATGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AACAAACC---------AACGCGCGCGCTTC------A--CSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................23170889.0070889283649107292444174
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................22138237.00382373405315371830817
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................21120397.00203971653619251001935
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2014605.0046053896315101293
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2112631.0026312626311
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2212341.0023412253244816
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2412112.0021121351293352116
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................2011285.0012851283101
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................221829.008295921942023
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................231394.00394292621921
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGC..............................................................................221364.003641262919118
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................241342.00342244176813
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191218.00218218000
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................211218.00218208901
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191203.002031774517
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................231202.0020212229465
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................231193.001931697161
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................221182.0018211352611
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181139.00139516757
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................201129.00129129000
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACG...............................................................................211122.001224910576
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211119.00119110171
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................23192.009292000
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................19182.00824113253
.................................................................................................................................TGGAGCAGCGTCTGTACGGT..............................................................................................................................................20181.00811646811
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19162.006261001
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................18159.00591819166
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21155.005555000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24151.0051209184
................................................................................................................................ATGGAGCAGCGTCTGTACGGT..............................................................................................................................................21150.005004127
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................22143.004337024
...............................................................................................................................GATGGAGCAGCGTCTGTACGGT..............................................................................................................................................22141.004103812
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................24140.004035221
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18134.0034190141
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................24131.003131000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25130.003023151
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................23128.002828000
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20126.002618350
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19124.002423010
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................21119.001917011
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22118.001818000
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23118.001818000
....................................................................................................................C----------GATGGAGCAGCGTCTGTACGGT..............................................................................................................................................23117.001711303
...................................................................................................................................GAGCAGCGTCTGTACGGT..............................................................................................................................................18117.00172177
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................22116.001616000
.......................................................................................................................................................AGTATTACATCAGGTACT..........................................................................................................................18116.001615001
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................25115.00154344
................................................................................................................................................................................................AGTACTTGTGTCATACTACGC..............................................................................21115.001514010
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................21113.001312100
......................................................................................................................................................GAGTATTACATCAGGTAC...........................................................................................................................18112.001212000
....................................................................................................................................................TTGAGTATTACATCAGGTACTG.........................................................................................................................22112.001212000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................24112.00129210
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCA.............................................................................23111.00117031
..................................................................................................................................GGAGCAGCGTCTGTACGGT..............................................................................................................................................19110.001010000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA....................................................................................................................2619.0094032
...................................................................................................................AC----------GATGGAGCAGCGTCTGTACGGT..............................................................................................................................................2418.0081700
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA.....................................................................................................................2518.0085210
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT......................................................................................................................2218.0088000
.........................................................................................................................................................TATTACATCAGGTACTGGTT......................................................................................................................2018.0083500
......................................................................................................................................................GAGTATTACATCAGGTACTGGC.......................................................................................................................2218.0088000
.....................................................................................................................................................TGAGTATTACATCAGGTACGT.........................................................................................................................2117.0077000
..........................................................................................................................................................ATTACATCAGGTACTGGTT......................................................................................................................1917.0076010
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT......................................................................................................................2417.0077000
......................................................................................................................................................GAGTATTACATCAGGTACTT.........................................................................................................................2016.0066000
droYak3
CCATC--CTC-A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCATCATCG--GSizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
No Reads
droEre2
AGGGC--AT-------------------------------------------------------CATTCCCGCGACGCAGT--------GAAGGAT-----------CGGC-TGTAC----------GAAGGAGCAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAAACCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGACC--------AA-AAACC----------ACGCGCGCGCTTCTCCCACA--CSizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT.......................................................................................................................231231206.0023120636916238320372690278017982151397
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG........................................................................................................................22170932.007093262499198529033937781920121
.....................................................................................................................................................TGAGTATTACATCAGGTACTG.........................................................................................................................21135359.00353592704651604153522422810
.....................................................................................................................................................TGAGTATTACATCAGGTACT..........................................................................................................................2018170.00817063901562549715729106
......................................................................................................................................................GAGTATTACATCAGGTACTGG........................................................................................................................2114778.00477847481422570
......................................................................................................................................................GAGTATTACATCAGGTACTGGT.......................................................................................................................2214599.00459929331251384341518
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT......................................................................................................................2413011.0030111601335339839301145
......................................................................................................................................................GAGTATTACATCAGGTACTG.........................................................................................................................2012119.0021192116000120
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT........................................................................................................................2211220.00122071821410422486
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC.......................................................................................................................231896.00896156499683190106
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA.......................................................................................................................231700.0070040210939284100
.....................................................................................................................................................TGAGTATTACATCAGGTAC...........................................................................................................................191505.005053093881587417
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA......................................................................................................................241458.004583171841760348
.....................................................................................................................................................TGAGTATTACATCAGGTACTT.........................................................................................................................211351.003513210725160
......................................................................................................................................................GAGTATTACATCAGGTACT..........................................................................................................................191338.00338333000005
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG.......................................................................................................................231321.00321199507115445
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG......................................................................................................................241221.00221115563242129
.......................................................................................................................................................AGTATTACATCAGGTACTGG........................................................................................................................201211.00211210000100
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC..............................................................................221196.001961285902250
..........................................................................................................................................................ATTACATCAGGTACTGGT.......................................................................................................................181195.001953415114454838
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT......................................................................................................................231145.001451300002013
.......................................................................................................................................................AGTATTACATCAGGTACTGGT.......................................................................................................................211141.001411210031214
.........................................................................................................................................................TATTACATCAGGTACTGGT.......................................................................................................................191141.0014111026341672
.....................................................................................................................................................TGAGTATTACATCAGGTA............................................................................................................................181119.001192102068280
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA........................................................................................................................22196.009678210960
......................................................................................................................................................GAGTATTACATCAGGTACTGT........................................................................................................................21188.008886000110
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC......................................................................................................................24176.00761653518722
............................................................................................................................................................TACATCAGGTACTGGT.......................................................................................................................16174.007400000074
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC........................................................................................................................22171.0071481500710
.................................................................................................................................AGGAGCAGCGTCTGTACGGT..............................................................................................................................................20170.007070025650
.........................................................................................................................................................TATTACATCAGGTACTGG........................................................................................................................18168.0068353012270
.......................................................................................................................................................AGTATTACATCAGGTACTG.........................................................................................................................19165.006565000000
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG........................................................................................................................23158.005858000000
........................................................................................................................................................GTATTACATCAGGTACTGG........................................................................................................................19154.005445101430
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT.....................................................................................................................25153.0053154312190
.....................................................................................................................................................TGAGTATTACATCAGGTACTA.........................................................................................................................21148.004831020960
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG......................................................................................................................23144.004440310000
.....................................................................................................................................................TGAGTATTACATCAGGTACC..........................................................................................................................20141.004143600010
........................................................................................................................................................GTATTACATCAGGTACTGGT.......................................................................................................................20139.003923308320
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA.....................................................................................................................25136.003621100626
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT........................................................................................................................22133.003329003100
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT.............................................................................23132.003217501270
......................................................................................................................................................GAGTATTACATCAGGTACTGGA.......................................................................................................................22130.003030000000
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG...............................................................................21129.002923202020
....................................................................................................................................................TTGAGTATTACATCAGGTACTG.........................................................................................................................22128.002828000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA......................................................................................................................24128.0028110201410
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT.......................................................................................................................24128.002828000000
...................................................................................................................................GAGCAGCGTCTGTACGGT..............................................................................................................................................18125.002510012030
.....................................................................................................................................................TGAGTATTACATCAGGTACTC.........................................................................................................................21124.002419000500
..................................................................................................................TAC----------GAAGGAGCAGCGTCTGTACGGT..............................................................................................................................................25123.002300002021
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA......................................................................................................................23122.002222000000
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGTGCCTTT...............................................................................................................31121.002100000021
...........................................................................................................................................................TTACATCAGGTACTGGT.......................................................................................................................17121.002100000021
.....................................................................................................................................................TGAGTATTACATCAGGT.............................................................................................................................17118.001800000018
.......................................................................................................................................................AGTATTACATCAGGTACT..........................................................................................................................18116.001616000000
........................................................................................................................................................GTATTACATCAGGTACTG.........................................................................................................................18114.001414000000
................................................................................................................................................................................................AGTACTTATGTCATACTACGC..............................................................................21114.001412200000
................................................................................................................................AAGGAGCAGCGTCTGTACGGT..............................................................................................................................................21114.001410011200

Generated: 10/20/2015 at 11:20 PM