ID:

dwi-mir-11

 Coordinate:

scf2_1100000004902:8479040-8479121 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.1 -26.1 -25.9

Flybase annnotation

intron [Dwil\GK12076-in]; utr3 [utr3_minus_8346]; pre_miRNA [Dwil\mir-11-RM]; miRNA [Dwil\miR-11-RA]

No Repeatable elements found

Sense Strand Reads

CTCCGCGTTGCACCAAATTCAAATGTGGCCAAACAGCAAAGAGAAGCCCTTCTTGTCAAGATCTCTCTCTGTGACCTGCGTGAGATTTATCATATATGAAAACCGCATCACAGTCTGAGTTCTTGCTGAGCGGTGAGCTAAGCAAGACAACCTAAAGATTTATATGTAAATAAAAATAATTG

*****************************************...(((.((.((((.(((((.(((...((((((..(((((((......)))...........))))))))))...))).))))).)))).))...)))..***************************************** 		Read size # Mismatch Hit Count Total Norm Total M020

head

 M045

female body

 V118

embryo

 V119

head

 V117

male body
.........................................................................................................CATCACAGTCTGAGTTCTTGC........................................................ 21 0 1 195925.00 195925 87953 27741 32238 42016 5977
.........................................................................................................CATCACAGTCTGAGTTCTTGCT....................................................... 22 0 1 159956.00 159956 14663 76631 34745 26507 7410
.........................................................................................................CATCACAGTCTGAGTTCTTG......................................................... 20 0 1 52362.00 52362 35629 9791 2929 2277 1736
.........................................................................................................CATCACAGTCTGAGTTCTTGCTT...................................................... 23 1 1 16812.00 16812 3874 2022 4963 5123 830
.........................................................................................................CATCACAGTCTGAGTTCTTGCTA...................................................... 23 1 1 9039.00 9039 51 1351 6932 641 64
..........................................................................................................ATCACAGTCTGAGTTCTTGCT....................................................... 21 0 1 7420.00 7420 55 5506 909 814 136
.........................................................................................................CATCACAGTCTGAGTTCTTGCA....................................................... 22 1 1 4294.00 4294 126 706 2897 544 21
..........................................................................................................ATCACAGTCTGAGTTCTTGC........................................................ 20 0 1 3800.00 3800 163 1928 782 831 96
.........................................................................................................CATCACAGTCTGAGTTCTTGCC....................................................... 22 1 1 2933.00 2933 2380 251 129 148 25
.........................................................................................................CATCACAGTCTGAGTTCTTGCAA...................................................... 23 2 1 2776.00 2776 1 360 2400 13 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCTAA..................................................... 24 1 1 2655.00 2655 0 173 2459 19 4
........................................................CAAGATCTCTCTCTGTGACCTGCG...................................................................................................... 24 0 1 1922.00 1922 342 409 986 168 17
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTT..................................................... 24 2 1 1449.00 1449 115 165 288 854 27
.........................................................................................................CATCACAGTCTGAGTTCTTGCTC...................................................... 23 1 1 1432.00 1432 748 166 66 440 12
.........................................................................................................CATCACAGTCTGATTTCTTG......................................................... 20 1 1 1309.00 1309 1269 17 7 14 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCTG...................................................... 23 0 1 1238.00 1238 1090 40 34 67 7
.........................................................................................................CATCACAGTCTGAGTTCTTGT........................................................ 21 1 1 1153.00 1153 484 189 67 272 141
.........................................................................................................CATCACAGTCTGAGTTCTTGCTAAA.................................................... 25 2 1 1001.00 1001 0 176 824 1 0
.........................................................................................................CATCACAGTCTGAGTTCTT.......................................................... 19 0 1 882.00 882 111 402 115 232 22
..........................................................................................................ATCACAGTCTGAGTTCTTG......................................................... 19 0 1 810.00 810 59 654 41 41 15
.........................................................................................................CATCACAGTCTGATTTCTTGCT....................................................... 22 1 1 766.00 766 456 106 107 84 13
.........................................................................................................CATCACAGTCTGATTTCTTGC........................................................ 21 1 1 565.00 565 414 34 48 65 4
........................................................CAAGATCTCTCTCTGTGACCT......................................................................................................... 21 0 1 520.00 520 488 16 13 3 0
.........................................................................................................CATCACAGTCTGAGTTCTGG......................................................... 20 1 1 516.00 516 516 0 0 0 0
..........................................................................................................ATCACAGTCTGAGTTCTTGCTT...................................................... 22 1 1 484.00 484 4 177 144 143 16
.........................................................................................................CATCACAGTCTGGGTTCTTGC........................................................ 21 1 1 419.00 419 330 17 26 43 3
...........................................................................................................TCACAGTCTGAGTTCTTGCT....................................................... 20 0 1 409.00 409 10 305 8 81 5
.........................................................................................................CATCACAGTCTGAGTTCTTGA........................................................ 21 1 1 409.00 409 59 73 97 177 3
.........................................................................................................CATCACAGTCTGAGTTCTTGCG....................................................... 22 1 1 394.00 394 354 19 9 11 1
..........................................................................................................ATCACAGTCTGAGTTCTTGCTA...................................................... 22 1 1 317.00 317 0 89 207 19 2
.........................................................................................................CATCACAGTCTGAGTTCTTAC........................................................ 21 1 1 314.00 314 172 4 25 111 2
.........................................................................................................CATCACAGCCTGAGTTCTTGC........................................................ 21 1 1 286.00 286 105 27 72 72 10
.............................................................................................................ACAGTCTGAGTTCTTGCT....................................................... 18 0 1 285.00 285 15 103 57 106 4
.........................................................................................................CATCACAGTCTGAGTTCT........................................................... 18 0 1 279.00 279 253 19 5 2 0
.........................................................................................................TATCACAGTCTGAGTTCTTGC........................................................ 21 1 1 261.00 261 33 3 59 159 7
........................................................................................................GCATCACAGTCTGAGTTCTTGC........................................................ 22 0 1 261.00 261 4 47 166 43 1
.........................................................................................................CATCACAGTCTAAGTTCTTGCT....................................................... 22 1 1 254.00 254 6 183 16 47 2
.........................................................................................................TATCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 248.00 248 20 16 92 114 6
.........................................................................................................CATCACAGTCTGAGTTCTTGCTAAAA................................................... 26 3 1 230.00 230 0 64 166 0 0
.........................................................................................................CATCACAGTCTTAGTTCTTGCT....................................................... 22 1 1 222.00 222 17 67 97 38 3
.........................................................................................................CATCACAGCCTGAGTTCTTGCT....................................................... 22 1 1 213.00 213 17 68 70 46 12
.........................................................................................................CATCACAGTCTTAGTTCTTGC........................................................ 21 1 1 207.00 207 70 29 67 38 3
.........................................................................................................CATCACAGTCTGAGTTCTTGCTAT..................................................... 24 2 1 205.00 205 2 13 172 15 3
.........................................................................................................CACCACAGTCTGAGTTCTTGC........................................................ 21 1 1 205.00 205 79 19 37 58 12
............................................................................................................CACAGTCTGAGTTCTTGCT....................................................... 19 0 1 201.00 201 3 137 11 48 2
.........................................................................................................CATCACAGTCTAAGTTCTTGC........................................................ 21 1 1 199.00 199 34 63 19 79 4
.........................................................................................................CATCACAGTCTGAGCTCTTGCT....................................................... 22 1 1 193.00 193 6 49 73 55 10
.........................................................................................................CATCACAGTCTGCGTTCTTGC........................................................ 21 1 1 193.00 193 81 0 38 60 14
.........................................................................................................CATCACAGTCTGACTTCTTG......................................................... 20 1 1 190.00 190 182 3 2 3 0
.........................................................................................................CATCACAGTATGAGTTCTTGC........................................................ 21 1 1 181.00 181 21 2 32 126 0
.........................................................................................................CATCGCAGTCTGAGTTCTTGC........................................................ 21 1 1 179.00 179 69 19 42 47 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCAAA..................................................... 24 2 1 176.00 176 0 49 125 2 0
.........................................................................................................CATCACAGTCTGACTTCTTGCT....................................................... 22 1 1 170.00 170 83 16 27 37 7
.........................................................................................................AATCACAGTCTGAGTTCTTGC........................................................ 21 1 1 165.00 165 13 5 73 73 1
.........................................................................................................CATCACAGTCTGAGCTCTTGC........................................................ 21 1 1 164.00 164 38 8 36 74 8
.........................................................................................................CATAACAGTCTGAGTTCTTGC........................................................ 21 1 1 163.00 163 3 1 33 121 5
.........................................................................................................CATCACAGTCTGCGTTCTTGCT....................................................... 22 1 1 158.00 158 13 7 48 54 36
.........................................................................................................CATCACAGTCTGAGTTCTTGCTCC..................................................... 24 2 1 157.00 157 8 15 0 134 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTTT.................................................... 25 3 1 156.00 156 10 19 14 110 3
.........................................................................................................CATCACAGTCTCAGTTCTTGCT....................................................... 22 1 1 155.00 155 18 93 21 20 3
.........................................................................................................CATCACAGTCTGAGTTCTTCCT....................................................... 22 1 1 154.00 154 6 56 38 44 10
.........................................................................................................AATCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 153.00 153 5 17 83 48 0
.........................................................................................................CATCACAGTCTGAGTTCTTGAT....................................................... 22 1 1 153.00 153 1 4 48 99 1
........................................................CAAGATCTCTCTCTGTGACC.......................................................................................................... 20 0 1 151.00 151 142 5 4 0 0
.........................................................................................................CATCACAGTCTGAGTTATTGC........................................................ 21 1 1 151.00 151 7 1 37 106 0
.........................................................................................................CATCACAGTCTGAGTTCTTTC........................................................ 21 1 1 150.00 150 7 8 75 56 4
.........................................................................................................CATCACAGTCCGAGTTCTTGC........................................................ 21 1 1 149.00 149 41 13 22 64 9
.........................................................................................................CATCACAGTCTGAGTCCTTGC........................................................ 21 1 1 149.00 149 26 15 34 66 8
.........................................................................................................CATCACAGTCCGAGTTCTTGCT....................................................... 22 1 1 147.00 147 9 42 29 57 10
........................................................................................................GCATCACAGTCTGAGTTCTTG......................................................... 21 0 1 143.00 143 13 15 45 69 1
.........................................................................................................CATCAAAGTCTGAGTTCTTGC........................................................ 21 1 1 141.00 141 1 1 20 116 3
.........................................................................................................CATCACAGTCTTAGTTCTTG......................................................... 20 1 1 141.00 141 124 10 6 0 1
.........................................................................................................CATCACAGTCTGACTTCTTGC........................................................ 21 1 1 138.00 138 75 7 17 34 5
.........................................................................................................CATCGCAGTCTGAGTTCTTGCT....................................................... 22 1 1 137.00 137 13 43 46 26 9
.........................................................................................................CACCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 135.00 135 12 44 38 35 6
.........................................................................................................CATCACAGTCTGGGTTCTTGCT....................................................... 22 1 1 135.00 135 49 31 30 20 5
..........................................................................................................ATCACAGTCTGAGTTCTTGCA....................................................... 21 1 1 135.00 135 0 39 82 14 0
.........................................................................................................CATCACAGTCTGGGTTCTTG......................................................... 20 1 1 134.00 134 121 6 1 2 4
...........................................................................................................TCACAGTCTGAGTTCTTGC........................................................ 19 0 1 131.00 131 0 114 5 11 1
........................................................CAAGATCTCTCTCTGTGACCTGC....................................................................................................... 23 0 1 130.00 130 49 41 33 7 0
.........................................................................................................CATCACAGTCTGAGTTCCTGC........................................................ 21 1 1 128.00 128 30 11 30 51 6
.........................................................................................................CATCACAGTCTGAGTTCTTTCT....................................................... 22 1 1 128.00 128 6 31 58 29 4
.........................................................................................................CATCACAGTCTGAGTCCTTGCT....................................................... 22 1 1 126.00 126 12 38 28 38 10
.........................................................................................................CATCACAGTCTGAGTTCTTGG........................................................ 21 1 1 125.00 125 99 13 8 3 2
.........................................................................................................CATCACAGTCTGAGTTCCTGCT....................................................... 22 1 1 120.00 120 7 31 35 38 9
.........................................................................................................CGTCACAGTCTGAGTTCTTGC........................................................ 21 1 1 120.00 120 63 9 15 30 3
.........................................................................................................CATCACAGTCTGAGTTATTGCT....................................................... 22 1 1 119.00 119 1 4 41 73 0
.........................................................................................................CATCACATTCTGAGTTCTTGCT....................................................... 22 1 1 119.00 119 21 39 33 23 3
.........................................................................................................CATCACATTCTGAGTTCTTGC........................................................ 21 1 1 115.00 115 35 18 25 37 0
.........................................................................................................CATCACAGTCTGAGTTCTTCT........................................................ 21 2 1 115.00 115 0 76 16 19 4
.........................................................................................................CATTACAGTCTGAGTTCTTGC........................................................ 21 1 1 115.00 115 35 3 21 54 2
.........................................................................................................CATCACGGTCTGAGTTCTTGC........................................................ 21 1 1 114.00 114 27 11 28 42 6
.........................................................................................................CATCACAATCTGAGTTCTTGC........................................................ 21 1 1 114.00 114 27 4 8 72 3
.........................................................................................................CATCACAGTCTGAGTTCTCGC........................................................ 21 1 1 113.00 113 17 5 40 47 4
.........................................................................................................CATCACAGTATGAGTTCTTGCT....................................................... 22 1 1 110.00 110 2 2 41 65 0
............................................................................................................CACAGTCTGAGTTCTTGC........................................................ 18 0 1 108.00 108 13 63 6 24 2
.........................................................................................................CATCACAGTCTCAGTTCTTGC........................................................ 21 1 1 107.00 107 29 34 13 28 3
........................................................CAAGATCTCTCTCTGTGACCTG........................................................................................................ 22 0 1 106.00 106 36 55 13 1 1
..........................................................................................................ATCACAGTCTGAGTTCTTGCAA...................................................... 22 2 1 105.00 105 0 21 83 1 0
.........................................................................................................CATAACAGTCTGAGTTCTTGCT....................................................... 22 1 1 104.00 104 0 2 30 70 2
.........................................................................................................CATCACAGTCTGAGTTCTTCC........................................................ 21 1 1 102.00 102 4 5 39 48 6
.........................................................................................................CATCACAGTCTGAGTTCTCGCT....................................................... 22 1 1 100.00 100 4 17 49 24 6
.........................................................................................................CATCACGGTCTGAGTTCTTGCT....................................................... 22 1 1 96.00 96 2 23 33 28 10
.........................................................................................................CATCACAGTCTGAGTTCTTACT....................................................... 22 1 1 91.00 91 2 18 25 45 1
.........................................................................................................CATCCCAGTCTGAGTTCTTGC........................................................ 21 1 1 90.00 90 3 0 29 54 4
.........................................................................................................CGTCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 89.00 89 8 33 21 21 6
.........................................................................................................CATCACACTCTGAGTTCTTGC........................................................ 21 1 1 89.00 89 6 9 21 51 2
.........................................................................................................CATCAAAGTCTGAGTTCTTGCT....................................................... 22 1 1 87.00 87 1 9 14 60 3
.........................................................................................................CATCATAGTCTGAGTTCTTGC........................................................ 21 1 1 85.00 85 13 3 18 49 2
........................................................................................................GCATCACAGTCTGAGTTCTTGCT....................................................... 23 0 1 85.00 85 0 64 12 9 0
........................................................................................................CCATCACAGTCTGAGTTCTTGCT....................................................... 23 1 1 84.00 84 0 80 0 4 0
.........................................................................................................CATCACAGTCTGAATTCTTGC........................................................ 21 1 1 83.00 83 27 1 9 44 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCCA...................................................... 23 2 1 78.00 78 3 17 51 6 1
.........................................................................................................CATCACAGTCTGAGATCTTGC........................................................ 21 1 1 77.00 77 28 7 6 35 1
........................................................CAAGATCTCTCTCTGTGACCTGCGT..................................................................................................... 25 0 1 76.00 76 14 24 25 7 6
.........................................................................................................CATCACAATCTGAGTTCTTGCT....................................................... 22 1 1 75.00 75 5 13 12 42 3
.........................................................................................................CATCACAGTCTGAGTTCTTT......................................................... 20 1 1 75.00 75 3 8 11 24 29
.........................................................................................................CATCACAGTCTCAGTTCTTG......................................................... 20 1 1 74.00 74 64 7 0 3 0
.........................................................................................................CATCACACTCTGAGTTCTTGCT....................................................... 22 1 1 74.00 74 3 16 22 30 3
.........................................................................................................CATCACAGTCTGAGTTCTTC......................................................... 20 1 1 72.00 72 3 20 13 36 0
..........................................................................................................ATCACAGTCTGAGTTCTTGCTAA..................................................... 23 1 1 71.00 71 0 14 57 0 0
.........................................................................................................CATCACAGTCTGAGTTCTTGTT....................................................... 22 1 1 70.00 70 10 18 18 22 2
.........................................................................................................CATCACAGTCTGAATTCTTGCT....................................................... 22 1 1 69.00 69 11 9 15 32 2
.........................................................................................................GATCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 66.00 66 14 13 8 29 2
.........................................................................................................CATCATAGTCTGAGTTCTTGCT....................................................... 22 1 1 65.00 65 6 14 19 24 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCCT...................................................... 23 2 1 63.00 63 35 6 7 12 3
.........................................................................................................CATCACAGTCTGCGTTCTTG......................................................... 20 1 1 61.00 61 37 1 9 6 8
.........................................................................................................CATTACAGTCTGAGTTCTTGCT....................................................... 22 1 1 61.00 61 1 11 21 27 1
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTA..................................................... 24 1 1 61.00 61 3 7 24 26 1
.........................................................................................................CATCACAGCCTGAGTTCTTG......................................................... 20 1 1 60.00 60 43 10 2 2 3
......................................AAGAGAAGCCCTTCTTGT.............................................................................................................................. 18 0 1 60.00 60 0 0 60 0 0
.........................................................................................................CATCACAGTCTGAGATCTTGCT....................................................... 22 1 1 60.00 60 9 17 13 21 0
........................................................................................................ACATCACAGTCTGAGTTCTTGCT....................................................... 23 1 1 58.00 58 1 57 0 0 0
.........................................................................................................GATCACAGTCTGAGTTCTTGC........................................................ 21 1 1 58.00 58 9 7 15 25 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCCC...................................................... 23 2 1 58.00 58 18 22 1 17 0
.........................................................................................................CACCACAGTCTGAGTTCTTG......................................................... 20 1 1 58.00 58 45 3 3 5 2
........................................................................................................TCATCACAGTCTGAGTTCTTGCT....................................................... 23 1 1 57.00 57 0 57 0 0 0
.........................................................................................................CATCACAGTCTGAGTTTTTGC........................................................ 21 1 1 55.00 55 17 3 8 26 1
.........................................................................................................CATCACAGTTTGAGTTCTTGC........................................................ 21 1 1 54.00 54 13 1 10 29 1
.........................................................................................................CATCACAGTCTGAGGTCTTGC........................................................ 21 1 1 53.00 53 38 6 1 8 0
.........................................................................................................CATCACAGGCTGAGTTCTTGC........................................................ 21 1 1 51.00 51 33 7 2 8 1
.........................................................................................................CCTCACAGTCTGAGTTCTTGC........................................................ 21 1 1 51.00 51 3 1 13 32 2
.........................................................................................................CATCCCAGTCTGAGTTCTTGCT....................................................... 22 1 1 50.00 50 1 2 25 21 1
.........................................................................................................CATCACAGTCTGAGTTCTTGCTCT..................................................... 24 2 1 48.00 48 0 6 3 39 0
..........................................................................................................ATCACAGTCTGAGTTCTTGCTAAA.................................................... 24 2 1 47.00 47 0 11 36 0 0
.........................................................................................................CATCGCAGTCTGAGTTCTTG......................................................... 20 1 1 47.00 47 28 9 5 3 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCAT...................................................... 23 2 1 47.00 47 1 3 35 7 1
.........................................................................................................CATCACAGTCTAAGTTCTTG......................................................... 20 1 1 46.00 46 18 26 0 2 0
..........................................................................................................ATCACAGTCTGAGTTCTTGCTTT..................................................... 23 2 1 46.00 46 0 16 7 23 0
.........................................................................................................CATCACAGTCTGATTTCTTGCC....................................................... 22 2 1 45.00 45 44 1 0 0 0
.........................................................................................................CATCACCGTCTGAGTTCTTGC........................................................ 21 1 1 45.00 45 3 1 18 18 5
........................................................................................................CCATCACAGTCTGAGTTCTTGC........................................................ 22 1 1 45.00 45 2 34 8 1 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTG..................................................... 24 2 1 44.00 44 10 4 4 26 0
..........................................................................................................CTCACAGTCTGAGTTCTTGCT....................................................... 21 1 1 43.00 43 9 2 3 28 1
.........................................................................................................CATCACAGTCTGTGTTCTTGC........................................................ 21 1 1 43.00 43 22 0 9 11 1
.........................................................................................................CATCACAGTCTGAGTTCTTGAA....................................................... 22 2 1 42.00 42 2 8 28 3 1
.........................................................................................................CATCACAGTCTGAGTTCTTGCTCCC.................................................... 25 3 1 42.00 42 4 6 0 32 0
.........................................................................................................CATCACAGTCTGAGTTTTTGCT....................................................... 22 1 1 41.00 41 6 6 13 12 4
.........................................................................................................CATCACAGACTGAGTTCTTGC........................................................ 21 1 1 40.00 40 2 3 5 29 1
.........................................................................................................CATCACCGTCTGAGTTCTTGCT....................................................... 22 1 1 39.00 39 0 1 21 10 7
.........................................................................................................CATCACAGACTGAGTTCTTGCT....................................................... 22 1 1 39.00 39 0 10 11 15 3
.........................................................................................................CTTCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 39.00 39 3 4 6 23 3
.........................................................................................................CATCACAGTTTGAGTTCTTGCT....................................................... 22 1 1 38.00 38 1 9 12 12 4
...........................................................................................................TCACAGTCTGAGTTCTTG......................................................... 18 0 1 38.00 38 3 34 0 1 0
.........................................................................................................CCTCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 37.00 37 0 2 15 19 1
.........................................................AAGATCTCTCTCTGTGACCTGCGT..................................................................................................... 24 0 1 37.00 37 3 4 23 3 4
.........................................................................................................AATCACAGTCTGAGTTCTTGCTT...................................................... 23 2 1 36.00 36 0 0 25 11 0
.........................................................AAGATCTCTCTCTGTGACCTGCG...................................................................................................... 23 0 1 36.00 36 0 27 6 3 0
.........................................................................................................CATCACAGTCTGAGGTCTTG......................................................... 20 1 1 35.00 35 34 1 0 0 0
..........................................................................................................ATCACAGTCTGAGTTCTTGCC....................................................... 21 1 1 35.00 35 5 19 6 4 1
..........................................................................................................ATCACAGTCTGAGTTCTT.......................................................... 18 0 1 34.00 34 0 27 1 5 1
.........................................................................................................CATCACAGTCTGATTTCTTGCTT...................................................... 23 2 1 34.00 34 12 4 9 9 0
.........................................................................................................CATCACAGTCTGAGCTCTTG......................................................... 20 1 1 33.00 33 14 6 7 5 1
.........................................................................................................CATCACAGTCTGAGGTCTTGCT....................................................... 22 1 1 32.00 32 8 7 13 4 0
.........................................................................................................CATCACAGTCTGCGTTCTTGCTT...................................................... 23 2 1 32.00 32 2 0 9 17 4
.........................................................................................................CATCACAGTCGGAGTTCTTGC........................................................ 21 1 1 32.00 32 19 5 3 4 1
........................................................................................................ACATCACAGTCTGAGTTCTTGC........................................................ 22 1 1 31.00 31 0 28 2 1 0
.........................................................................................................CATCACAGTCCGAGTTCTTG......................................................... 20 1 1 30.00 30 18 7 1 1 3
........................................................................................................TCATCACAGTCTGAGTTCTTGC........................................................ 22 1 1 30.00 30 0 28 1 1 0
.........................................................................................................CAACACAGTCTGAGTTCTTGCT....................................................... 22 1 1 29.00 29 1 14 8 6 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTAG..................................................... 24 2 1 29.00 29 2 2 24 1 0
........................................................CAAGATCTCTCTCTGTGACCC......................................................................................................... 21 1 1 29.00 29 29 0 0 0 0
.........................................................................................................CATCACAGCCTGAGTTCTTGCTT...................................................... 23 2 1 27.00 27 5 3 7 12 0
.........................................................................................................CTTCACAGTCTGAGTTCTTGC........................................................ 21 1 1 27.00 27 8 0 6 12 1
..........................................................................................................ATCACAGTCTGGGTTCTTGCT....................................................... 21 1 1 27.00 27 0 25 0 2 0
.........................................................................................................CATCACAGTCTGAGATCTTG......................................................... 20 1 1 27.00 27 22 0 1 4 0
.........................................................................................................CATCACAGTCTGGGTTCTTGCTT...................................................... 23 2 1 27.00 27 10 3 3 6 5
..........................................................................................................ATCACAGTCTGAGTTCTTGCTC...................................................... 22 1 1 26.00 26 3 12 3 8 0
.........................................................................................................CATCACAGTCTGAGTTCATGC........................................................ 21 1 1 26.00 26 0 1 3 21 1
.........................................................................................................CGTCACAGTCTGAGTTCTTG......................................................... 20 1 1 25.00 25 18 3 2 1 1
.........................................................................................................CATCACAGTCTGAGTTCTTA......................................................... 20 1 1 25.00 25 10 3 5 2 5
.........................................................................................................CATCACAGTCTGAGTTCTTCTT....................................................... 22 2 1 24.00 24 0 2 12 10 0
........................................................CAAGATCTCTCTCTGTGACCTGCGA..................................................................................................... 25 1 1 24.00 24 7 4 12 1 0
.........................................................................................................CATCACAGTCAGAGTTCTTGC........................................................ 21 1 1 24.00 24 5 3 4 11 1
.........................................................................................................TATCACAGTCTGAGTTCTTG......................................................... 20 1 1 24.00 24 7 3 4 10 0
.........................................................................................................TATCACAGTCTGAGTTCTTGCTT...................................................... 23 2 1 24.00 24 1 1 9 13 0
.........................................................................................................CATCACAGTCTGAGTGCTTGCT....................................................... 22 1 1 24.00 24 0 22 1 1 0
.........................................................................................................TATCACAGTCTGAGTTCTTGCTA...................................................... 23 2 1 23.00 23 0 0 16 7 0
.........................................................................................................CATCACAGTCAGAGTTCTTGCT....................................................... 22 1 1 23.00 23 3 11 3 6 0
.........................................................................................................CATCACAGTCTGAGTTCTTTCTA...................................................... 23 2 1 23.00 23 0 0 23 0 0
.........................................................................................................CATCACAGTCTGTGTTCTTGCT....................................................... 22 1 1 23.00 23 4 3 6 7 3
.........................................................................................................CATCACAGTCTGAGTACTTGCT....................................................... 22 1 1 23.00 23 0 10 3 9 1
.........................................................................................................CATCACGGTCTGAGTTCTTG......................................................... 20 1 1 23.00 23 15 2 4 2 0
.........................................................................................................CATAACAGTCTGAGTTCTTGCTT...................................................... 23 2 1 23.00 23 0 0 9 14 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCAAAA.................................................... 25 3 1 23.00 23 0 12 11 0 0
.........................................................................................................CATCACAGTCTGAGTACTTGC........................................................ 21 1 1 22.00 22 4 2 4 9 3
.........................................................................................................CATCACAGTCTGAGCTCTTGCTT...................................................... 23 2 1 22.00 22 0 2 8 11 1
.........................................................................................................CATCACAGGCTGAGTTCTTGCT....................................................... 22 1 1 22.00 22 4 9 3 6 0
.........................................................................................................CATCACAGTCTGAGTTCTAGC........................................................ 21 1 1 22.00 22 0 2 2 18 0
.........................................................................................................CATGACAGTCTGAGTTCTTGC........................................................ 21 1 1 21.00 21 6 2 6 7 0
.............................................................................................................ACAGTCTGAGTTCTTGCTT...................................................... 19 1 1 21.00 21 3 7 9 2 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTAAT.................................................... 25 2 1 21.00 21 0 2 19 0 0
........................................................................................................GCATCACAGTCTGAGTTCTTGCC....................................................... 23 1 1 21.00 21 2 5 9 5 0
.........................................................................................................CATCGCAGTCTGAGTTCTTGCTT...................................................... 23 2 1 21.00 21 2 3 10 4 2
.........................................................................................................CAACACAGTCTGAGTTCTTGC........................................................ 21 1 1 21.00 21 5 4 4 8 0
.........................................................................................................CATCTCAGTCTGAGTTCTTGC........................................................ 21 1 1 20.00 20 7 0 4 9 0
..........................................................................................................ATCACAGTCTGAGTTCTTGT........................................................ 20 1 1 20.00 20 1 11 0 5 3
.........................................................................................................CATCACAGTCTGAGTTCTTGATT...................................................... 23 2 1 20.00 20 1 0 4 15 0
.........................................................................................................CAGCACAGTCTGAGTTCTTGCT....................................................... 22 1 1 20.00 20 0 13 3 4 0
.........................................................................................................CATCACAGTCTGAGTTCTTTCTT...................................................... 23 2 1 20.00 20 0 3 7 10 0
.........................................................................................................CACCACAGTCTGAGTTCTTGCTT...................................................... 23 2 1 20.00 20 2 2 6 9 1
.........................................................................................................CATCACAGTCTGAGTTCCTG......................................................... 20 1 1 19.00 19 12 1 1 5 0
.......................................................................................................CGCATCACAGTCTGAGTTCTTG......................................................... 22 0 1 19.00 19 7 1 6 3 2
.........................................................................................................CATCACAGTCTGAGTTCTGC......................................................... 20 2 1 19.00 19 2 1 2 14 0
.........................................................................................................CATCACAGTCTAAGTTCTTGCTT...................................................... 23 2 1 19.00 19 4 4 3 8 0
.........................................................................................................CATCACAGTCTGAGTTCTAGCT....................................................... 22 1 1 18.00 18 0 4 2 11 1
.........................................................................................................CATCAAAGTCTGAGTTCTTGCTT...................................................... 23 2 1 18.00 18 0 0 2 15 1
.........................................................................................................CATCACAGCCTGAGTTCTTGCTA...................................................... 23 2 1 18.00 18 0 1 17 0 0
.........................................................................................................CATCATAGTCTGAGTTCTTG......................................................... 20 1 1 18.00 18 11 1 3 3 0
.........................................................................................................CATCACAGTCTGAGTTATTGCTT...................................................... 23 2 1 18.00 18 0 0 7 11 0
.........................................................................................................CATCACATTCTGAGTTCTTG......................................................... 20 1 1 18.00 18 8 6 4 0 0
.........................................................................................................AATCACAGTCTGAGTTCTTGCTA...................................................... 23 2 1 18.00 18 0 0 18 0 0
.........................................................................................................CATCACAGTCTGAGTCCTTG......................................................... 20 1 1 17.00 17 8 3 0 3 3
.........................................................................................................CATCACAGTCTTAGTTCTTGCTT...................................................... 23 2 1 17.00 17 0 2 11 4 0
...........................................................................................................TCACAGTCTGAGTTCTTGCTT...................................................... 21 1 1 17.00 17 0 12 2 3 0
.........................................................................................................CATCACAGTATGAGTTCTTGCTT...................................................... 23 2 1 17.00 17 0 0 3 14 0
.........................................................................................................CATCACAATCTGAGTTCTTG......................................................... 20 1 1 17.00 17 11 1 0 5 0
.........................................................................................................CATCACAGTCTGAGTTCTTCTA....................................................... 22 3 1 17.00 17 0 1 15 1 0
.........................................................................................................CATCCCAGTCTGAGTTCTTGCTT...................................................... 23 2 1 17.00 17 0 1 3 13 0
.........................................................................................................CATCACAGTCTGAGTTCTTGATA...................................................... 23 2 1 16.00 16 0 0 13 3 0
.........................................................................................................CATCACAGTCTGAGTTCTTCCTA...................................................... 23 2 1 16.00 16 0 1 12 2 1
.........................................................................................................CATCACAGTCTGATTTCTTGCTA...................................................... 23 2 1 16.00 16 0 2 12 2 0
.........................................................................................................CATCACAGTGTGAGTTCTTGC........................................................ 21 1 1 16.00 16 5 0 3 7 1
.........................................................................................................CATCACAGTCTGACTTCTTGCC....................................................... 22 2 1 16.00 16 13 1 0 2 0
.........................................................................................................CATCACACTCTGAGTTCTTG......................................................... 20 1 1 16.00 16 6 2 1 5 2
.........................................................................................................CATCACAGTCTGAGTTCTTGAC....................................................... 22 2 1 16.00 16 14 0 0 2 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTAA.................................................... 25 2 1 15.00 15 0 4 10 1 0
.........................................................................................................CATCACAGTCTGAGTTCATGCT....................................................... 22 1 1 15.00 15 1 2 6 6 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTC..................................................... 24 2 1 15.00 15 6 2 3 3 1
.........................................................................................................CATCACAGTCGGAGTTCTTGCT....................................................... 22 1 1 15.00 15 2 8 3 2 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTTA.................................................... 25 3 1 15.00 15 0 2 5 8 0
.........................................................................................................CATCACAGTCTGAGTTCTTGGT....................................................... 22 1 1 15.00 15 2 2 3 6 2
.........................................................................................................CATCACAGTCTGAGTTCTTGTTT...................................................... 23 2 1 15.00 15 1 5 2 7 0
.........................................................................................................CATCTCAGTCTGAGTTCTTGCT....................................................... 22 1 1 15.00 15 2 2 3 7 1
........................................................................................................CCATCACAGTCTGAGTTCTTG......................................................... 21 1 1 15.00 15 3 10 1 1 0
........................................................CAAGAACTTTCTCTGTGACCCG........................................................................................................ 22 3 2 14.50 29 8 19 2 0 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTGT..................................................... 24 1 1 14.00 14 11 0 0 3 0
..........................................................................................................CTCACAGTCTGAGTTCTTGC........................................................ 20 1 1 14.00 14 4 1 1 8 0
..........................................................................................................ATCACAGTCTGGGTTCTTGC........................................................ 20 1 1 14.00 14 0 11 1 2 0
.........................................................................................................CATCACAGTGTGAGTTCTTGCT....................................................... 22 1 1 14.00 14 2 6 5 1 0
.........................................................................................................CATCACAATCTGAGTTCTTGCTT...................................................... 23 2 1 14.00 14 0 1 1 12 0
.........................................................................................................CATCACAGGCTGAGTTCTTG......................................................... 20 1 1 14.00 14 12 0 0 1 1
........................................................................................................GCATCACAGTCTGAGTTCTT.......................................................... 20 0 1 14.00 14 0 0 2 12 0
.........................................................................................................CATCACAGTCTGTGTTCTTG......................................................... 20 1 1 14.00 14 12 1 0 1 0
.........................................................................................................CATCCCAGTCTGAGTTCTTG......................................................... 20 1 1 14.00 14 1 1 9 3 0
.........................................................................................................CATCACTGTCTGAGTTCTTGCT....................................................... 22 1 1 14.00 14 0 4 6 4 0
.........................................................................................................CATCACAGTCTGCGTTCTTGCTA...................................................... 23 2 1 14.00 14 0 0 12 2 0
.........................................................................................................CATCACAGTCTTAGTTCTTGCTA...................................................... 23 2 1 14.00 14 0 1 12 1 0
............................................................................................................CACAGTCTGAGTTCTTGCTT...................................................... 20 1 1 13.00 13 0 6 0 5 2
.........................................................................................................CATCACAGTCTGAGTTTTTG......................................................... 20 1 1 13.00 13 11 0 2 0 0
.........................................................................................................CATCACAGTCTGAGTTCTCGCTT...................................................... 23 2 1 13.00 13 1 0 4 7 1
.........................................................................................................CATTACAGTCTGAGTTCTTG......................................................... 20 1 1 13.00 13 7 2 1 2 1
.........................................................................................................CATCACAGTCTGAGTTGTTGC........................................................ 21 1 1 13.00 13 2 0 6 4 1
.........................................................................................................CATCACAGTCTGAGTTCTGCT........................................................ 21 3 2 13.00 26 1 6 5 10 4
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTAT.................................................... 25 2 1 13.00 13 0 1 4 8 0
.........................................................................................................CACCACAGTCTGAGTTCTTGCTA...................................................... 23 2 1 13.00 13 0 1 12 0 0
.........................................................................................................CATCACAGTATGAGTTCTTG......................................................... 20 1 1 13.00 13 6 0 3 4 0
................................................................................TGAGATTTATCATATATGAAAACCG............................................................................. 25 0 1 13.00 13 0 3 9 1 0
..........................................................................................................ATCACAGTCTGATTTCTTGCT....................................................... 21 1 1 13.00 13 2 6 4 1 0
.........................................................................................................CATCACAGTCTGACTTCTTGCTT...................................................... 23 2 1 13.00 13 5 0 4 3 1
.........................................................................................................CATCACAGTCTGAGTTCTTGCAG...................................................... 23 1 1 13.00 13 0 1 12 0 0
........................................................CAAGATCTCTCTCTGTGACCG......................................................................................................... 21 1 1 12.00 12 12 0 0 0 0
.........................................................................................................CATCACAGTCTGAGCTCTTGCTA...................................................... 23 2 1 12.00 12 0 1 10 1 0
..........................................................................................................ATCACAGTCTGAGTTCTTTCT....................................................... 21 1 1 12.00 12 0 7 2 3 0
.........................................................................................................CATCACAGTCTGAGTTCTTGCTATA.................................................... 25 3 1 12.00 12 0 1 10 1 0
.........................................................................................................CATCACAGTCTGAGTTCTTGAAA...................................................... 23 3 1 12.00 12 0 3 8 1 0
.........................................................................................................CATCACAGTCTGAGTTCCTGCTT...................................................... 23 2 1 12.00 12 2 0 3 7 0
.........................................................................................................CATCACAGTCGGAGTTCTTG......................................................... 20 1 1 12.00 12 8 3 1 0 0
.........................................................................................................AATCACAGTCTGAGTTCTTG......................................................... 20 1 1 12.00 12 6 2 2 2 0
.........................................................................................................CATGACAGTCTGAGTTCTTGCT....................................................... 22 1 1 12.00 12 0 5 3 4 0
.........................................................................................................CATCACATTCTGAGTTCTTGCTT...................................................... 23 2 1 12.00 12 4 0 5 3 0
.........................................................................................................CATCACAGTCTGAGTTATTG......................................................... 20 1 1 12.00 12 1 0 4 7 0
.........................................................................................................CATCACAGTCTGAGTTCTCG......................................................... 20 1 1 12.00 12 5 2 3 1 1
..........................................................AGATCTCTCTCTGTGACCTGCGT..................................................................................................... 23 0 1 12.00 12 1 3 5 0 3
.........................................................................................................CATAACAGTCTGAGTTCTTGCTA...................................................... 23 2 1 12.00 12 0 0 11 1 0
.........................................................................................................CATCACAGTCCGAGTTCTTGCTT...................................................... 23 2 1 12.00 12 3 0 2 5 2
.........................................................................................................CATCACGGTCTGAGTTCTTGCTT...................................................... 23 2 1 12.00 12 2 0 6 2 2
.........................................................................................................CATCACAGTTTGAGTTCTTG......................................................... 20 1 1 12.00 12 6 0 3 2 1
.........................................................................................................CAGCACAGTCTGAGTTCTTGC........................................................ 21 1 1 12.00 12 1 4 5 1 1
.........................................................................................................CATAACAGTCTGAGTTCTTG......................................................... 20 1 1 12.00 12 2 0 3 5 2
.........................................................................................................CATCACAGTCTGAGTTCTTGCTTTG.................................................... 25 2 1 12.00 12 10 0 0 2 0

Anti-sense strand reads

GAGGCGCAACGTGGTTTAAGTTTACACCGGTTTGTCGTTTCTCTTCGGGAAGAACAGTTCTAGAGAGAGACACTGGACGCACTCTAAATAGTATATACTTTTGGCGTAGTGTCAGACTCAAGAACGACTCGCCACTCGATTCGTTCTGTTGGATTTCTAAATATACATTTATTTTTATTAAC

*****************************************...(((.((.((((.(((((.(((...((((((..(((((((......)))...........))))))))))...))).))))).)))).))...)))..***************************************** 		Read size # Mismatch Hit Count Total Norm Total M045

female body
...............................TTGTCGTCTCTCTACGGGAAGT................................................................................................................................. 22 3 1 1.00 1 1
....................................................................GACACTGGACGCAATATAAA.............................................................................................. 20 2 11 0.09 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004902:8478990-8479171 + dwi-mir-11 Known_mirbase CTCCG--CGTTGCACCAAATTC-------AAATGTGGCCAAACAGCAAAGAGAAGCCCTTCTTGTCAAGATCTCTCTCTGTGACCTGCGTGAGATTTATCATATAT-GAAAACCGCATCACAGTCTGAGTTCTTGCTGAGCGGTGA-G-----CTAAGCAAGACAACCTAA----------------AG--AT------TTATATGTAAATAAAAA-------------TAATTG
droVir3 scaffold_13047:6338912-6339070 + dvi-mir-11 Known_mirbase GCGCC--TGCTTTAACAG-TTCGAAT-------TTGGTTTT-----ATTGAA--GCGC-ACTTATCAAGAACTTTTTCTGTGACTTGCGTGAACTCT----TATAT-GCAAACCGCATCACAGTCTGAGTTCTTGCTTAGCG-CGC-A-----CTTCGCACAGCAACAGAC----------------GA----A-------------TATACGAAAAT-------------TCAG
droMoj3 scaffold_6540:1740078-1740201 - dmo-mir-11 Known_mirbase ------------------------------------------------------------CTTAACAAGAACTTTTTCTGTGACCTGCGTGAATTCC----TATAT-GCAAACCGCATCACAGTCTGAGTTCTTGCTTAGCG-CGC-A-----CTTCGCACAGCAACATAA----------------AA--ATCAAAATCAAAATAT--------A-------------TATTTA
droGri2 scaffold_14906:11659452-11659605 + dgr-mir-11 Known_mirbase CAGCGACTG--TTAACAG-TTCGAATTCGA----------------AATGAA--GCCC-ACTCGTCAAGAACTCTCTCTGTGACTTGCGTGAACTTT----CATGT-GAAAATCGCATCACAGTCTGAGTTCTTGCTGAGCG-CGC-T------TTCGCACCACAGCATAC----------------AT----A-------------AAATCAAAA-------------AAACCA
dp5 2:23857500-23857638 - dps-mir-11 Known_mirbase A--------------------------------------------------G--GCCC-TCTTGTCAAGAACTTATTCTGTGACCTGCGTGAC---------ATTT----AGCCACATCACAGTCTGAGTTCTTGCTGAGCG-TGA-A-----CT-CGCCAACCAACATGAGTGAATAGCCCCCAAAAAACAT------TTAA----------------AAGTGAAAGTGAATTC
droPer2 scaffold_3:6634063-6634201 - dpe-mir-11 Known_mirbase A--------------------------------------------------G--GCTC-TCTTGTCAAGAACTTATTCTGTGACCTGCGTGAC---------ATTT----AGCCACATCACAGTCTGAGTTCTTGCTGAGCG-TGA-A-----CT-CGCCAACCAACATGAGTGAATAGCCCCCAAAAAACAT------TTAA----------------AAGTGAAAGTGAACTC
droAna3 scaffold_13340:5675689-5675800 + dan-mir-11 Known_mirbase ------------------------------------------------------------CTTGCCAAGAACTCTCTCTGTGACTTGTGTCCT--TT----TTTTC-GAAACTCACATCACAGTCTGAGTTCTTGCTGAGAG-CGGGA-----ATCCTCCAATC-GCATCA----------------AG----G------------------GGA----------GAA-TAATTA
droBip1 scf7180000396708:3138270-3138388 - ------------------------------------------------------------CTTGTCAAGAACTCTCTCTGTGACCTGCGTG----------CTTTT-AAAACCCACATCACAGTCTGAGTTCTTGCTGAGCG-TGG-C-----AACCTCAAAGCAACCTAA----------------AA----A------------------CGTATCAAGGGGAGAGTTAACAT
droKik1 scf7180000302706:727473-727615 + AT------------------TT-------ATTCGAGTCCAAAAATCTAAGAG--GCGC-ACTTGTCAAGAACTTATTCTGTGACCTGCGTG----------TATTT-CAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-AATCAAATCCTCACAGCAGCATAA----------------AT----G------------------AAACCG-------------AATA
droFic1 scf7180000454096:749095-749210 - ------------------------------------------------------------CTTGTCAAGAGCTCTCTCTGTGACCTGCGTG----------TATCC-ACAATCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-------GTCCTCGAAGCAACATAA----------------AC----CAAAACCTAAG--G-----TAAC-------------AGATCA
droEle1 scf7180000491104:157968-158087 - AA-------------------------------------------CAATGAG--GAGC-ACTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TATCC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-TAA-A-----ATCCTTTAAGCAACATAA----------------AC----C------------------AAAGAT-------------AATG
droRho1 scf7180000762316:7792-7890 - ------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TATCC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGGGTG-TGT-A-----TTCCTTAAAGCAACATAA----------------AA----A------------------CAA--------------------
droBia1 scf7180000302402:5913091-5913195 - ------------------------------------------------------------CTCGGCAAGAACTTTCTCTGTGACCTGCGTG----------TATTC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-G-----ATCCTCACGGCAACATAA----------------AT----C------------------GCAATC-------------A-AG
droTak1 scf7180000415711:238153-238294 + A----------------G-ATC------GA----------------AATGAG--GCGC-ACTTGTCAAGAACTTTTTCTGTGACCTGCGTG----------TATTC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-T-----GTCCTCACAGCAACATAA----------------AT----TGAAATCAAAAAGGAAATCAAGG-------------AAATCG
droEug1 scf7180000409760:941498-941610 + ------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TATCCGAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGG-C-----AACCTCAAGGCAACATAA----------------AA----G------------------GAAAGC-------AAGGAAATTC
dm3 chr3R:17448185-17448290 - dme-mir-11 Known_mirbase ------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCCGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-CGA-A-----ATCCTCGAAGCAACATTA----------------AG----C------------------GAAATC-------------ATGG
droSim2 3r:3864527-3864632 + dsi-mir-11 Known_mirbase ------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCCGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-CGA-A-----ATCCTCGAAGCAACATTA----------------AG----C------------------GAAATA-------------ATGG
droSec2 scaffold_6:4043871-4043976 + dse-mir-11 Known_mirbase ------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCCGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-CGA-A-----ATCCTCGAAGCAACATTA----------------AG----C------------------GAAATC-------------ATGG
droYak3 3R:6285751-6285845 - dya-mir-11 Known_mirbase ------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-CGA-A-----ATCCTCAAAGCAACATAA----------------AG----------------------------------------------
droEre2 scaffold_4770:4217185-4217290 + der-mir-11 Known_mirbase ------------------------------------------------------------CTTGCCAAGAACTTTCTCTGTGACCTGCGTG----------TACTG-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-CGG-A-----ATCCTCGAAGCAACATAA----------------AG----C------------------GAAATC-------------ATGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CTCCG--CGTTGCACCAAATTC-------AAATGTGGCCAAACAGCAAAGAGAAGCCCTTCTTGTCAAGATCTCTCTCTGTGACCTGCGTGAGATTTATCATATAT-GAAAACCGCATCACAGTCTGAGTTCTTGCTGAGCGGTGA-G-----CTAAGCAAGACAACCTAA----------------AG--AT------TTATATGTAAATAAAAA-------------TAATTGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211195925.00195925879532774159773223842016
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221159956.00159956146637663174103474526507
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20152362.0052362356299791173629292277
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23116812.00168123874202283049635123
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2319039.009039511351646932641
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................2117420.007420555506136909814
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2214294.004294126706212897544
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2013800.003800163192896782831
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................2212933.002933238025125129148
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................2312776.00277613602240013
.................................................................CAAGATCTCTCTCTGTGACCTGCG..................................................................................................................................................2411922.00192234240917986168
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2411449.00144911516527288854
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................2311432.0014327481661266440
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................2311238.00123810904073467
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2111153.00115348418914167272
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................191882.0088211140222115232
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................191810.0081059654154141
.................................................................CAAGATCTCTCTCTGTGACCT.....................................................................................................................................................211520.00520488160133
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221484.00484417716144143
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201409.00409103055881
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211409.004095973397177
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221394.00394354191911
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221317.00317089220719
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181285.0028515103457106
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................181279.0027925319052
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................221261.00261447116643
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................241205.00205213317215
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191201.00201313721148
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCC................................................................................................241157.0015781500134
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251156.001561019314110
.................................................................CAAGATCTCTCTCTGTGACC......................................................................................................................................................201151.001511425040
..................................................................................................................GCATCACAGTCTGAGTTCTTG....................................................................................................211143.00143131514569
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211135.0013503908214
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191131.0013101141511
.................................................................CAAGATCTCTCTCTGTGACCTGC...................................................................................................................................................231130.0013049410337
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211125.001259913283
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211115.0011507641619
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................181108.0010813632624
.................................................................CAAGATCTCTCTCTGTGACCTG....................................................................................................................................................221106.0010636551131
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................221105.001050210831
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................23185.00850640129
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................23178.00783171516
.................................................................CAAGATCTCTCTCTGTGACCTGCGT.................................................................................................................................................25176.007614246257
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................20175.007538291124
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................20172.007232001336
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23163.00633563712
...............................................AAGAGAAGCCCTTCTTGT..........................................................................................................................................................................18160.0060000600
...................................................................................................................CATCACAGTCTGAGTTCTTGCCC.................................................................................................23158.005818220117
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCT................................................................................................24148.0048060339
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................23147.0047131357
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................23146.00460160723
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................24144.00441040426
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................22142.0042281283
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCCC...............................................................................................25142.0042460032
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18138.0038334001
..................................................................AAGATCTCTCTCTGTGACCTGCGT.................................................................................................................................................24137.0037344233
..................................................................AAGATCTCTCTCTGTGACCTGCG..................................................................................................................................................23136.0036027063
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................21135.0035519164
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18134.0034027115
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAG................................................................................................24129.0029220241
.................................................................CAAGATCTCTCTCTGTGACCC.....................................................................................................................................................21129.0029290000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTC.................................................................................................22126.0026312038
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................20125.0025103552
.................................................................CAAGATCTCTCTCTGTGACCTGCGA.................................................................................................................................................25124.0024740121
.......................................................................................................................ACAGTCTGAGTTCTTGCTT.................................................................................................19121.002137092
..................................................................................................................GCATCACAGTCTGAGTTCTTGCC..................................................................................................23121.002125095
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................20120.0020111305
.................................................................................................................CGCATCACAGTCTGAGTTCTTG....................................................................................................22119.001971263
...................................................................................................................CATCACAGTCTGAGTTCTGC....................................................................................................20119.0019210214
.....................................................................................................................TCACAGTCTGAGTTCTTGCTT.................................................................................................21117.0017012023
...................................................................................................................CATCACAGTCTGAGTTCTTCTA..................................................................................................22117.0017010151
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................22116.0016140002
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................24115.001562133
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTA...............................................................................................25115.001502058
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGT................................................................................................24114.0014110003
..................................................................................................................GCATCACAGTCTGAGTTCTT.....................................................................................................20114.0014000212
......................................................................................................................CACAGTCTGAGTTCTTGCTT.................................................................................................20113.001306205
...................................................................................................................CATCACAGTCTGAGTTCTGCT...................................................................................................21213.0026164510
.........................................................................................TGAGATTTATCATATAT-GAAAACCG........................................................................................................................25113.001303091
.................................................................CAAGATCTCTCTCTGTGACCG.....................................................................................................................................................21112.0012120000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTATA...............................................................................................25112.0012010101
...................................................................................................................CATCACAGTCTGAGTTCTTGAAA.................................................................................................23112.001203081
...................................................................AGATCTCTCTCTGTGACCTGCGT.................................................................................................................................................23112.001213350
droVir3
GCGCC--TGCTTTAACAG-TTCGAAT-------TTGGTTTT-----ATTGAA--GCGC-ACTTATCAAGAACTTTTTCTGTGACTTGCGTGAACTCT----TATAT-GCAAACCGCATCACAGTCTGAGTTCTTGCTTAGCG-CGC-A-----CTTCGCACAGCAACAGAC----------------GA----A-------------TATACGAAAAT-------------TCAGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................2211113282.0011132822910423412846443761613254206615189574410475908052286187950093164134843834557167533623516341311728444555429924885095001033845811052348238623876714845263453476297923932457454533711009782569798194231567330527242401613322391182969982817617136635576187128143236465724895506127831398111372747937380856981268176963638196814410445122631378015569
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211870994.00870994128221879842602553190156492798012851020144152226815437616133287116103824382515676195351631712695265524937112228715895788473767108662055786121022168229420471079612517163334273201153252229203473381690561375495423634515154117382036113991681118622349013644139751425994818837115856754483824547743913525660569921365017415
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................201185485.001854856532116701960015925455444319534313864567534281482388134867412671622794591215721219734919441419303821635823693832598407829607194710401188831301594375613775778111177121745020197327071602381102665663933974536864564751587393685025285114292330
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231120634.00120634135964643224910416522739681334984393031392544651855924306592957970110121328431725571046743259986511643784105346037168104329221732311438611017549503825271243292423602076167910015817190541055694587578495267965105247288152173
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................221105446.001054466633274629549072514227635456286473919618729831791082936216225112017220533122250275067204862449276121356297468213254313173818163138654626272352283631394326312550321032792671816413618959025580922210038130355373246315
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23181461.00814619471532347497311611217177215019446784882472281486792354101899762014051248130519127197401412118115491940692199831317321912252873241964189382113142028253976337675486671454582242346153725399269486238246424660962514309385956475365402164201318384
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................23172219.007221929101138331105156126091183997383208810678038264849441347385189914821616290326162062067227429169719411983360832522807131712893933929426300005031041212346155326222580377024472295126412001410153334711945216232354169
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................22125704.00257041605927531311313187267317135822161248812218198532021873882781994323431288346145300523992806074742328123232382156214149171783010018146514879615141622115587971654942561157412511206126314372060
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................23120987.002098760566238661070916184189873024514663956553079603641095167129617579221983296472133001031000010001751514038317814251508655283207125141190164865100688912711526
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21115448.0015448815101821155989128148138320222826526271258292314266701351321261545316078357410435839371033221062338749483255242225104102305724068125579262292243115211127986910
...................................................................................................................CATCACAGTCTGAGTTCTTGCCC.................................................................................................23115325.00153251502149405156452725005601002740210291590936319891126158339476031840111011000511338004002500073013321004519267048121445104487074847919472931042233
.................................................................CAAGAACTTTTTCTGTGACTTGCG..................................................................................................................................................2419484.00948430349301191201872098153070004428728876088714614513325215834217175195117384533817419700152126012678665321146797236161131872619209568676283899596111313111414
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2018852.00885219453273101401371821220214015135320172814911716234317661137112126129471242215332252924187171021000002110111024434222300221911491441638028728332231315461114
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................1915881.005881185085858424614661225017711870346977592389078297884813093219345139306413444544844320232000000000000010010611025591411077873120441912242421782021
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCC................................................................................................2413824.003824188231071814627007012017591939262427353216817734838824768901830100821701103000003120010436447242124178839983126121062253
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................1813823.0038235393389141429000000054382086629112861830613332356112191845475786781110771313290221585880396475664443405263045612152834
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................2313399.003399872191042122623037117972274211633581423245158202791319222838859435615781879342051082260716570100344291226247337338503451111110
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2412996.002996163617215253527711005661216321896364408613941423172579915151133155081119126446100001002060000323112905736191011311831179773139118167131511
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2112984.0029849020731282372499120024061392225351487192671167232077121651386959813629141001000100000000136221603550315711469618044947074545
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................1912512.00251262614870165135302104211853425544451713262145642974542879101683000000000000000000034488082701114181219102300001
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................2312263.0022632411169541923022061310311111533189163542275438237214245327760894401210102001300000021141201015796339129120106821241662140463860
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................2211993.0019931321825063330223051930441635976732826225254551525919151731354551365657232237222312650339391171231262310793922192428
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................2411716.001716102343042705539318101112831414438553419231228691238718072130101100010201101000001293601077674652023102191557557488121
.........................................................................................TGAACTCT----TATAT-GCAAACCG........................................................................................................................2111643.0016438241513050001002412102222641458137523136323300000101100100001000210115142612182669212314515137675361103
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................2111453.001453303123915556103006115274362394624161134201741867512811910000000000000110004142430000129139603633292140233520268381
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................2411410.00141039182512964180090103722044813112201574110771085312601260010101450011102020101000002355910342424432725563925224
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................2011306.00130634178131511231002001037108397463434128890671270132111014173000000000000000000012549001300261110191202002
.................................................................CAAGAACTTTTTCTGTGACTTG....................................................................................................................................................2211214.001214301161351621052004000215482819631021492521101513305311000223051035235102150315112200011514276691169500000
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................1811131.001131691195121011534017468323419674012812131917626211331286100130641271761381040421411816270102585665834647745373334
....................................................................................................................ATCACAGTCTGAGTTCTTGCTC.................................................................................................2211061.0010619517201349111030010140021785512463210990319716510005800000000000000000001443902020012162718343410001
.................................................................CAAGAACTTTTTCTGTGACTTGC...................................................................................................................................................2311029.001029525831082202100000621610022102107821610021011000020104225102010301211661013711910881112109851448613
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................211980.009801242171612437007010010101255042441448470228105000003760100000000010000020063003511015271417242600010
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221935.00935222452152628233203372437316125161612341430131047434245822230000000000110000000746550101000118331818121600000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221890.008900095113151041173410111110510272630535632444804045816546100000000000000000001665018173316115481321425
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCT................................................................................................241787.00787403243103002000041903791891924252116131501730180100619001001001112001000093105004533116813633525
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201778.007782555615111100001223112103100233203230001020400000001012122542220433400011015113111600031
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................221526.005267710819811400200008536201129147591353172301500006190002010031300110101512120370011510108261600111
...................................................................................................................CATCACAGTCTGAGTTCTTGCCCC................................................................................................241497.004972901600910000000220100451020000233929670520000030000000000000000005000100000001682920213701110
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................201475.0047502260314812402204013382716253663011121396241291021330000000000000000000110234400010001000000012
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191425.00425142121000510000021102102003223143120001001000000010512130244461723400200159353810010
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211394.0039400233030200001313212302115255332227175147810000000000000000000261402631123250211123
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTA................................................................................................241337.003370117120010103447312423422861412265118021563103120010001010000010042400469101814714221174298
...................................................................................................................CATCACAGTCTGAGTTCTTGCAC.................................................................................................231309.003094122201000002000010030090101211400102020100000010000000000000020002533132122111329434337
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................221283.00283004501030000064000000100141562210000130101352143100000000000000000000201014613000200001110
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTAAA..............................................................................................261283.0028300200000000160000000000032430000120251120000000000000000000001000002817257586352721182138
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................221267.00267122200100000021120111122161124111652629263000000000000000000033240512736122211018421116
.................................................................CAAGAACTTTTTCTGTGACT......................................................................................................................................................201266.002662911001000000020000000000100000000000000000000310541400320400010323237552818422501122
...................................................................................................................CATCACAGTCTGAGTTCTTGTC..................................................................................................221263.0026311018531951040000121001161071320192491401500002260000000000010000010011200011034939800000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCCC...............................................................................................251261.0026114110002100000002101121823103111514114105000027000000000000000010000212000006121914102401100
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191251.00251011620112000001000030110171111310302001010000000000000000240002000023355565450022
...................................................................................................................CATCACAGTCTGAGTTCTTGAAA.................................................................................................231250.0025000200000000002200000000022082110030151629000000000000000000001030634442152100009671520
.................................................................CAAGAACTTTTTCTGTGACTTGCC..................................................................................................................................................241246.00246103171710000000000000000010000034130000000000074354871211779032511110200011141415161302001
.......................................................................................................................ACAGTCTGAGTTCTTGCC..................................................................................................181242.0024271530710020000210000141290130161810181190000315000000000000000000000100100051478212600000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251239.0023930111021103001085122555143229316239352521112100000001000000000000241000500132038300010
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAC................................................................................................241230.0023010183050000051000000200131232210041131229000100001000000000004000002018140330101910111024
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211218.0021842512033111000000050020110200011202510200012000000001000000000147400175161423620112
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTAA...............................................................................................251206.00206004000100001620011020100446803041105121613100000000000000000000100000781212103217824167
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................181206.002060383020300100202010020019203185162200002200000000000000023000440010016104961010101
.................................................................................................................CGCATCACAGTCTGAGTTCTTG....................................................................................................221201.0020181080017010003001011031021102330405102001000000000000000000033600300113221315152911240
..................................................................AAGAACTTTTTCTGTGACTTGCG..................................................................................................................................................231196.00196008431120100001010000001311013103010220000000000000001000000113341416016103012300221
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAG................................................................................................241192.00192204210011002132000000000931822102717614121100000000000000000000200000911464182646555
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................221189.001897424054030000000000000090010000301100000012000000000000000000001200010022101210102
...................................................................................................................CATCACAGTCTGAGTTCTTGCTATA...............................................................................................251184.001840030300000002400000010032141001111300611127000000000000000000003010601095011210128121315
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................241177.0017715220212000013330011050241233335913110244000000000000000000121201100110211087800012
....................................................................................................................ATCACAGTCTGAGTTCTTGCCC.................................................................................................221176.001763035001120000000000010130110000977210190000223000000000000000000100700000011601400000
..................................................................................................................GCATCACAGTCTGAGTTCTTG....................................................................................................211172.001727336002100100004113202523111110515100110120000000010020000000232000010121244141100000
...................................................................................................................CATCACAGTCTGAGTTCTTGCCCT................................................................................................241172.00172171500700000000000000500100109791308000001300010100000000000100050000001011154151300000
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................201164.0016437130331302002152110371025121799101033204120000000000000000000071800113011001000200
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTCC...............................................................................................251158.00158200028000100002001019351000013102230220000022000000000000000000000300000056245600000
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................231158.0015800986110000000010001041111132121000000001000020101041212001000006000020020001113
...................................................................AGAACTTTTTCTGTGACTTGCGT.................................................................................................................................................231156.0015601641983660023201000608011677112400000425000000000000000000101400312526022611102
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTAA..............................................................................................261148.001480000000000005100020100011278034170487400000000000000000000010002210101443412254459
.................................................................CAAGAACTTTTTCTGTGACTT.....................................................................................................................................................211145.001452317000000000000000100101012051130200100000000000001001001010000120001127127152300200
......................................TTT-----ATTGAA--GCGC-ACTTAT..........................................................................................................................................................................191144.0014400522212000000022000232264366460131112114300010100101011000006010000011010215310000
...................................................................................................................CATCACAGTCTGAGTTCTTGTA..................................................................................................221142.0014211638100000000101000008001001166513022000120000000000000000000121800031100320121001
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTAAAA-............................................................................................271132.00132001000000002500000000000225300004050410000000000001000000001000101510730002014971315
.......................................................................................................................ACAGTCTGAGTTCTTGCTT.................................................................................................191130.001301250026003000162210160030441231915001034000000000000000010011600100069538900001
.......................................................................................................................ACAGTCTGAGTTCTTGCTC.................................................................................................191130.0013032512420000010000030180320101197321040000110000000000000000000001300000001154200000
..................................................................AAGAACTTTTTCTGTGACTTGCGT.................................................................................................................................................241128.0012800110020434010110000201011112011122011110010000010100020000002400411912410201410012
.................................................................CAAGAACTTTTTCTGTGACTTGCCC.................................................................................................................................................251124.00124213300000000000000000000000000000000000000166452556557800240000000007162131500000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTACA...............................................................................................251122.001220000000000003100000000043020000000614212281000000000000000000010000059600000030337
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCCT...............................................................................................251119.001195131200000000000101260200000109153104000015000000000000010000010210000071402100000
...................................................................................................................CATCACAGTCTGAGTTCTTGTCC.................................................................................................232112.002249190363001000002001121011010017176500120000029000000000000000002001700000011326901000
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................181108.0010800560137010000000103020051112111214000114000000000000000000007100000000000000000
.......................................................................................................................ACAGTCTGAGTTCTTGCTA.................................................................................................191107.0010700310020102170100000000623142101716481130000000000000000000000000011470014031151
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................181100.0010040750002000000000001001000200040201100000000000000000000000010200000000103000000
.......................................................................................................................ACAGTCTGAGTTCTTGC...................................................................................................17198.0098000000000000000000000000000000000000000000000000000000011110150042353110000001511115
droMoj3
------------------------------------------------------------CTTAACAAGAACTTTTTCTGTGACCTGCGTGAATTCC----TATAT-GCAAACCGCATCACAGTCTGAGTTCTTGCTTAGCG-CGC-A-----CTTCGCACAGCAACATAA----------------AA--ATCAAAATCAAAATAT--------A-------------TATTTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................2211260876.001260876183774858459848191103547218871
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211340288.003402881223236753218132950212877131126
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................221234164.0023416493939118139232746183
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20175618.00756184982962346797433270310351
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23120862.002086224286259571501139911360
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21118568.0018568135301011071664201463
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................20111029.00110298775122366569535662
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2218658.00865820545731002085527196
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2317271.0072712644813531043523134
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................2317231.00723118687742158227191564
.................................................................CAAGAACTTTTTCTGTGACCTGCG..................................................................................................................................................2414287.00428737535536353018
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................1913536.0035363282845685128
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................1913392.00339219322941562389304
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................2313250.0032502072326131177652
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................2112246.00224630046219313
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2112115.00211573315274366132595
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................2211397.001397100113950
.................................................................CAAGAACTTTTTCTGTGACCTGC...................................................................................................................................................2311296.00129655210012182
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................2011252.00125256846565910
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................2111021.001021701359375
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211782.0078240355415518939
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................201730.007303260378387197
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................241669.0066912573260105340
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................241570.00570149546210712870
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCC................................................................................................241515.005152819284641110
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191461.004611523013023
.................................................................CAAGAACTTTTTCTGTGACCTG....................................................................................................................................................221429.00429464113761
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191414.00414339242643
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221401.0040116822173013034
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181376.00376651411626911
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................201342.0034251514864074
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231331.0033180719321885
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................181330.003308704102254
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................221294.002941047121773
.................................................................CAAGAACTTTTTCTGTGACCT.....................................................................................................................................................211274.00274122002600
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................231245.002451312101101
................................................................ACAAGAACTTTTTCTGTGACCTGCG..................................................................................................................................................251242.002429518221205
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221218.002181891301132
...................................................................................................................CATCACAGTCTGAGTTCTTGTC..................................................................................................221204.002044912510740
....................................................................................................................ATCACAGTCTGAGTTCTTGCTC.................................................................................................221203.0020313804111832
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211203.00203159516302
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221200.0020038128101284
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................221174.0017415880332
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................181168.0016816501200
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211165.00165749147583
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................181164.0016499062516
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................231163.001633018011104
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................241156.00156192027999
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................181152.0015214203601
.....................................................................................................................TCACAGTCTGAGTTCTTGCC..................................................................................................201146.0014630001430
.................................................................CAAGAACTTTTTCTGTGACC......................................................................................................................................................201131.0013120001290
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251130.001301163856712
................................................................ACAAGAACTTTTTCTGTGACCTGC...................................................................................................................................................241124.0012431001911
...................................................................................................................CATCACAGTCTGAGTTCTCT....................................................................................................201114.0011410001112
......................................................................................................................CACAGTCTGAGTTCTTGCC..................................................................................................191113.0011300001130
...................................................................................................................CATCACAGTCTGAGTTCTTGGC..................................................................................................221106.0010640001020
...................................................................................................................CATCACAGTCTGAGTTCTTGCCC.................................................................................................231103.001036107101510
.......................................................................................................................ACAGTCTGAGTTCTTGCC..................................................................................................18193.00930000930
.................................................................CAAGAACTTTTTCTGTGACCTGCGT.................................................................................................................................................25193.009315104712
..................................................................................................................GCATCACAGTCTGAGTTCTTGCC..................................................................................................23183.00834401731
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................20169.00695503209
...................................................................................................................CATCACAGTCTGAGTTCTTGAAA.................................................................................................23168.00685810081
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................22166.006633313215
..................................................................AAGAACTTTTTCTGTGACCTGCG..................................................................................................................................................23164.006443201180
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................20163.0063231710517
.................................................................CAAGAACTTTTTCTGTGACCC.....................................................................................................................................................21159.00590000590
..................................................................................................................GCATCACAGTCTGAGTTCTTG....................................................................................................21159.005942303101
droGri2
CAGCGACTG--TTAACAG-TTCGAATTCGA----------------AATGAA--GCCC-ACTCGTCAAGAACTCTCTCTGTGACTTGCGTGAACTTT----CATGT-GAAAATCGCATCACAGTCTGAGTTCTTGCTGAGCG-CGC-T------TTCGCACCACAGCATAC----------------AT----A-------------AAATCAAAA-------------AAACCASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................22164999.00649995123413765
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................21114974.0014974114193555
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................2114346.0043464008338
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................2013570.00357024551115
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................2311458.0014581092366
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2011002.00100293864
.................................................................CAAGAACTCTCTCTGTGACTTGCG..................................................................................................................................................241227.0022715473
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................191180.0018016812
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201176.001761760
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................191152.0015213121
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................221113.0011310211
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................23196.00967818
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................22190.0090819
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................22186.00865630
.................................................................CAAGAACTCTCTCTGTGACTTG....................................................................................................................................................22170.0070700
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................19167.0067670
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................21150.00503416
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................18149.0049418
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................19148.0048480
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................24148.00483810
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................23147.0047470
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................18144.0044431
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................23142.0042420
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................23138.00382810
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................24129.0029290
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................18125.0025241
.................................................................CAAGAACTCTCTCTGTGACTTGC...................................................................................................................................................23122.0022220
..................................................................AAGAACTCTCTCTGTGACTTGCG..................................................................................................................................................23121.0021201
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGG................................................................................................24115.0015150
.........................................................................................TGAACTTT----CATGT-GAAAATCG........................................................................................................................21113.0013112
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................21113.001358
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................22112.0012111
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18112.0012120
.................................................................CAAGAACTCTCTCTGTGACTT.....................................................................................................................................................21111.0011101
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18110.0010100
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................21110.0010100
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................2219.00990
..................................................................AAGAACTCTCTCTGTGACTTG....................................................................................................................................................2119.00990
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................2119.00981
.....................................................................................................................TCACAGTCTGAGTTCTTGCTT.................................................................................................2118.00880
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................2118.00871
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................2217.00770
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................2016.00615
.................................................................................................................CGCATCACAGTCTGAGTTCTTG....................................................................................................2216.00633
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................2316.00660
..................................................................AAGAACTCTCTCTGTGACTTGC...................................................................................................................................................2216.00660
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................2015.00505
.................................................................CAAGAACTCTCTCTGTGACTTGCGT.................................................................................................................................................2515.00541
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................2315.00541
...................................................................................................................CATCACAGTCTGAGTTCTTGCAC.................................................................................................2314.00440
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTG................................................................................................2314.00440
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................2114.00413
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................2514.00422
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................2313.00312
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGA................................................................................................2413.00330
...................................................................................................................CATCACAGTCTGAGTTCTTTT...................................................................................................2113.00321
....................................................................................................................ATCACAGTCTGAGTTCTTGCTG.................................................................................................2213.00330
....................................................................................................................ATCACAGTCTGAGTTCTTGCTC.................................................................................................2213.00321
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................2413.00321
...................................................................AGAACTCTCTCTGTGACTTGCG..................................................................................................................................................2212.00220
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................2312.00220
.................................................................CAAGAACTCTCTCTGTGAC.......................................................................................................................................................1912.00220
........................................................................................................................CAGTCTGAGTTCTTGCTT.................................................................................................1812.00220
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGC................................................................................................2412.00220
...................................................................................................................CATCACAGTCTGAGTTCTTGCGC.................................................................................................2312.00220
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................2012.00202
.................................................................CAAGAACTCTCTCTGTGACTTGCT..................................................................................................................................................2412.00220
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGGC...............................................................................................2512.00220
...................................................................AGAACTCTCTCTGTGACTTGC...................................................................................................................................................2112.00220
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................2012.00220
.................................................................CAAGAACTCTCTCTGTGACT......................................................................................................................................................2012.00220
.................................................................CAAGAACTCTCTCTGTGACTTGCGA.................................................................................................................................................2512.00220
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGGT...............................................................................................2512.00220
...................................................................................................................CATCACAGTCTGAGTTCTTGCGCC................................................................................................2411.00110
....................................................................GAACTCTCTCTGTGACTTGCGTGAACT............................................................................................................................................2711.00110
dp5
A--------------------------------------------------G--GCCC-TCTTGTCAAGAACTTATTCTGTGACCTGCGTGAC---------ATTT----AGCCACATCACAGTCTGAGTTCTTGCTGAGCG-TGA-A-----CT-CGCCAACCAACATGAGTGAATAGCCCCCAAAAAACAT------TTAA----------------AAGTGAAAGTGAATTCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221552414.0055241456932012010995254427169882632616839230221942697
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211125793.0012579312406738287261436030381340515950758457477
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................22141938.00419383210822834012217221071151373
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20138793.0038793102229746883012702412440012637256
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23129261.00292611511476311543653406239964946613144
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21124951.002495122346520128620745030611617
.................................................................CAAGAACTTATTCTGTGACCTG....................................................................................................................................................2217109.00710940561458313068114158144357
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2015579.00557944863208263205334323
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2315212.0052120379539137575801991151010
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2213168.003168323122551101121272142933
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2412887.00288781978221203117351410292
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2112460.002460451227811714280763240
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................1912040.002040019660222144212
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................2211301.00130101085425453130000
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................2011211.0012110113920353211100
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................191957.00957577459711428591
.................................................................CAAGAACTTATTCTGTGACCT.....................................................................................................................................................211918.009185855819792121144
..................................................................................................................ACATCACAGTCTGAGTTCTTGCT..................................................................................................231766.0076624012124873148332
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................231641.006410549112452131900
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231590.005906131146249151621033
..................................................................................................................ACATCACAGTCTGAGTTCTTGC...................................................................................................221584.005842272115626231240412
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251508.005080257215244179270
..................................................................AAGAACTTATTCTGTGACCTG....................................................................................................................................................211489.00489047230000608
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191385.0038503531312214000
.................................................................CAAGAACTTATTCTGTGACC......................................................................................................................................................201374.0037437123362100013
..................................................................................................................ACATCACAGTCTGAGTTCTTG....................................................................................................211366.00366329751152222001
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................221331.003310027061000000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221294.002940271301316000
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211294.002944190717253512040
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191287.002871263410333000
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181268.00268117111111422155810
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231229.00229117021198100000
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................211206.002060806261111000
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211184.00184017600134000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................231174.001740159010410000
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................201129.001291480021463010
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................231125.00125667111511213000
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................181116.0011614602110041303
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................181108.0010809815013000
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221106.0010693127812172000
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................201102.0010209300054000
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211101.001010244627004000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................24199.0099065805218100
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18197.009709700000000
..................................................................................................................ACATCACAGTCTGAGTTCTTGCC..................................................................................................23192.0092056220301001
.................................................................CAAGAACTTATTCTGTGACCTGT...................................................................................................................................................23187.008727204022041
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................23186.008606330457400
.................................................................CAAGAACTTATTCTGTGACCC.....................................................................................................................................................21166.0066004917000000
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18164.006406300010000
.....................................................................................................................TCACAGTCTGAGTTCTTGCTT.................................................................................................21151.005104702002000
..................................................................................................................ACATCACAGTCTGAGTTCTT.....................................................................................................20150.005003310097000
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................21149.004923326321000
..................................................................AAGAACTTATTCTGTGACCT.....................................................................................................................................................20144.004404400000000
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................22143.004304200100000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................24143.004307924003000
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................23137.0037019110411100
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................24136.003603401010000
...................................................................................................................CATCACAGTCTGAGTTCTTGTC..................................................................................................22135.003507225000010
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................22129.002912110132000
...................................................................AGAACTTATTCTGTGACCTG....................................................................................................................................................20124.002402400000000
...................................................................................................................CATCACAGTCTGAGTTCTTGTA..................................................................................................22124.002401530222000
...................................................................................................................CATCACAGTCTGAGTTCTTGCCC.................................................................................................23124.002407011011220
......................................................................................................................CACAGTCTGAGTTCTTGCTT.................................................................................................20122.002201621003000
...................................................................................................................CATCACAGTCTGAGTTCTTGGC..................................................................................................22121.002102163000000
........................................................................................................................CAGTCTGAGTTCTTGCTT.................................................................................................18121.002101901001000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTTT...............................................................................................24121.002101800120000
.................................................................................................................CACATCACAGTCTGAGTTCTTGC...................................................................................................23120.002004101320000
...................................................................................................................CATCACAGTCTGAGTTCTTTT...................................................................................................21120.002001002034010
.....................................................................................................................TCACAGTCTGAGTTCTTGCTA.................................................................................................21119.001901900000000
..................................................................................................................ACATCACAGTCTGAGTTCTTGCTT.................................................................................................24119.001901431001000
....................................................................................................................ATCACAGTCTGAGTTCTTGA...................................................................................................20118.001801700001000
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................20118.001801200013200
.................................................................................................................CACATCACAGTCTGAGTTCTTGCT..................................................................................................24118.001801340000100
.....................................................................................................................TCACAGTCTGAGTTCTTGCC..................................................................................................20118.001803114000000
droPer2
A--------------------------------------------------G--GCTC-TCTTGTCAAGAACTTATTCTGTGACCTGCGTGAC---------ATTT----AGCCACATCACAGTCTGAGTTCTTGCTGAGCG-TGA-A-----CT-CGCCAACCAACATGAGTGAATAGCCCCCAAAAAACAT------TTAA----------------AAGTGAAAGTGAACTCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221101820.00101820208449914534816507220475920
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................21152083.005208324771507510429006193365147
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20114373.001437313125797105136445981197
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23110087.0010087242162899120948282081
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................2114462.0044626343866246479227
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2311745.0017451411982635617044
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2011719.0017193107116149347133
.................................................................CAAGAACTTATTCTGTGACCTG....................................................................................................................................................2211364.001364531771286208
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................211930.0093071274112447233
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................221827.0082717504636513741
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................221764.00764295180147317032
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................191582.00582515258230434
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................241529.00529214376321698
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................191483.0048323813166021
.................................................................CAAGAACTTATTCTGTGACCT.....................................................................................................................................................211406.00406307921330
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221275.0027521050149064
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221231.002318212105230
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201204.002040169212516
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................231196.001961215426031
..................................................................................................................ACATCACAGTCTGAGTTCTTG....................................................................................................211151.001511057023529
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251139.001390280155937
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231128.001284026411434
..................................................................................................................ACATCACAGTCTGAGTTCTTGC...................................................................................................221119.0011934613153012
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231116.001164931011241
..................................................................................................................ACATCACAGTCTGAGTTCTTGCT..................................................................................................231107.001071640109284
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211106.00106154217293
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................18192.00923181032254
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................22185.00850734251
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................20172.007204174515
..................................................................AAGAACTTATTCTGTGACCTG....................................................................................................................................................21171.00710710000
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................18161.0061202322122
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................19147.00472420210
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................21146.00460400150
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................19145.00452272464
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................23141.004111930153
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23138.00384916135
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................21132.00320240161
..................................................................................................................ACATCACAGTCTGAGTTCTT.....................................................................................................20132.00320505184
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................21131.00315813140
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................20128.002801201123
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................21125.00255100271
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................18125.00252160403
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................23124.00240160161
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18122.00220170221
.................................................................CAAGAACTTATTCTGTGACC......................................................................................................................................................20121.00211460100
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................24118.0018053082
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................23114.0014030083
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18114.00140140000
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................22113.00130121000
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................20110.0010061021
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................22110.0010140131
droAna3
------------------------------------------------------------CTTGCCAAGAACTCTCTCTGTGACTTGTGTCCT--TT----TTTTC-GAAACTCACATCACAGTCTGAGTTCTTGCTGAGAG-CGGGA-----ATCCTCCAATC-GCATCA----------------AG----G------------------GGA----------GAA-TAATTASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221324789.00324789174592931762339132772202719378
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211142532.001425323595440127448912856637542731
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23127045.00270451008715831431421248011331
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................22127040.00270402362670418332128
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20119944.00199449005829342305432673447
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21114374.00143741250232536231758522
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................23111266.00112661960576425099296845
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2416530.006530189734172082234151
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2215384.005384141623865469662878
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2013959.003959258114650256158768
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................2311654.0016542529344233042
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2111397.001397259348195312589
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................2511362.001362261144477975
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................1911270.0012703782417298101452
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................2211222.001222786512385322
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................191755.0075561331365943
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211704.007046772292371442
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201702.007026164812530
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231565.00565156210242422129
.................................................................CAAGAACTCTCTCTGTGACTTGTG..................................................................................................................................................241535.005354453048444
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221528.0052847118217614
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231450.0045010917314343117
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................231276.002761440034125
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................201247.00247143162962123
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................241227.0022752101253838
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191211.00211163362154
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221210.0021011826253434
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211203.002031323704624
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................221191.0019101910000
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191166.001661302103111
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................241151.0015141116795
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211141.0014197692621
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181138.001387625313516
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211134.0013420215112849
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................181114.00114306501207
..................................................................................................................ACATCACAGTCTGAGTTCTTGCT..................................................................................................231103.001039390001
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................21199.00999850140
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................23197.0097252425932
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................24186.008626502647
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAC................................................................................................24186.00866638324
..................................................................................................................ACATCACAGTCTGAGTTCTTGC...................................................................................................22181.0081291642129
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTA...............................................................................................25179.007930101047
.................................................................CAAGAACTCTCTCTGTGACTTG....................................................................................................................................................22173.00736330007
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................18164.006438160118
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................20160.00601313311119
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTTT...............................................................................................24154.005420102229
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................23149.004922817002
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18148.004829005212
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23143.004318703015
.................................................................CAAGAACTCTCTCTGTGACTTGT...................................................................................................................................................23140.004022100323
.....................................................................................................................TCACAGTCTGAGTTCTTGCTT.................................................................................................21138.00383500102
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18137.00373600100
...................................................................................................................CATCACAGTCTGAGTTCTGCT...................................................................................................21137.00372060155
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAG................................................................................................24135.003591011104
..................................................................AAGAACTCTCTCTGTGACTTGTG..................................................................................................................................................23134.00343200002
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................20134.00341900078
...................................................................................................................CATCACAGTCTGAGTTCTTGCGT.................................................................................................23133.00332800203
.................................................................CAAGAACTCTCTCTGTGACTT.....................................................................................................................................................21131.00311482106
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................22127.00278150013
...................................................................................................................CATCACAGTCTGAGTTCTTGCAC.................................................................................................23127.00273240000
droBip1
------------------------------------------------------------CTTGTCAAGAACTCTCTCTGTGACCTGCGTG----------CTTTT-AAAACCCACATCACAGTCTGAGTTCTTGCTGAGCG-TGG-C-----AACCTCAAAGCAACCTAA----------------AA----A------------------CGTATCAAGGGGAGAGTTAACATSizeHit CountTotal NormTotal
No Reads
droKik1
AT------------------TT-------ATTCGAGTCCAAAAATCTAAGAG--GCGC-ACTTGTCAAGAACTTATTCTGTGACCTGCGTG----------TATTT-CAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-AATCAAATCCTCACAGCAGCATAA----------------AT----G------------------AAACCG-------------AATASizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------------------CTTGTCAAGAGCTCTCTCTGTGACCTGCGTG----------TATCC-ACAATCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-------GTCCTCGAAGCAACATAA----------------AC----CAAAACCTAAG--G-----TAAC-------------AGATCASizeHit CountTotal NormTotal
No Reads
droEle1
AA-------------------------------------------CAATGAG--GAGC-ACTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TATCC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-TAA-A-----ATCCTTTAAGCAACATAA----------------AC----C------------------AAAGAT-------------AATGSizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TATCC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGGGTG-TGT-A-----TTCCTTAAAGCAACATAA----------------AA----A------------------CAA--------------------SizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------CTCGGCAAGAACTTTCTCTGTGACCTGCGTG----------TATTC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-G-----ATCCTCACGGCAACATAA----------------AT----C------------------GCAATC-------------A-AGSizeHit CountTotal NormTotal
No Reads
droTak1
A----------------G-ATC------GA----------------AATGAG--GCGC-ACTTGTCAAGAACTTTTTCTGTGACCTGCGTG----------TATTC-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGA-T-----GTCCTCACAGCAACATAA----------------AT----TGAAATCAAAAAGGAAATCAAGG-------------AAATCGSizeHit CountTotal NormTotal
No Reads
droEug1
------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TATCCGAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-TGG-C-----AACCTCAAGGCAACATAA----------------AA----G------------------GAAAGC-------AAGGAAATTCSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCCGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-CGA-A-----ATCCTCGAAGCAACATTA----------------AG----C------------------GAAATC-------------ATGGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................2215584014.005584014002031726799223270394208219231714114671960280173991368039331483608190256122228515995811688439358799470331314510192816249300314243180142431341629411252620685355764832332015751349166064646397107700000000000000000100271148978001123667639278785143651120851250176442141157262251722890181816834596102676252407223821610305672152952242831292258984336621097919242599144125993500701945810472892955395026429823989429292651350043679234142528446228867512246392021714798374545437110445272422306621799216173070513946192942829012594801201501146311555403976863109141105322686926323017781207898612351100923899043599326384336888547957401924790321845393649938419310732485511875248861315451595516735122099365711634245743040202471128675793644946561981892352004067003112847014436220173010052115279418113988892843406220501100136449599111234603586383751715121632302661490611748901372893293819817412443084955635593340922302873806049507182103812937869801423291263484965665278192023299187816312300661195349447695343419877042178236421662755923854013349090709629168691789923681705542367713897222823271494791206522424362272155352299510431149359094483087625500996207348304319555979458304153282725097469789856784445585436801111050780203031028037349213901551838884272162709452437521835248
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................2114758796.004758796001014560283123232847291843833546231901227153068141271329179699893343249123922417141164535571521854058184689611351954691615537646043140775911991175575440311295543486105517391126168000000000000000002551289520762724215385272282396730248913202472286464189241412971693248046268478942757169376340493888343762068931529024894424101313332421915236087173410374315798761871179928477613014211612020417540712740891286913451104639765604413326110268576999015963141931297519028117454196427681132481765539137182524164984978576674640335124811628512689373265910151841088859928247728025537311955211142870301130470236480145112491412076314670615671615315329376146151401464910565814618216190917327709145458202862829828248566783191127968453891186610927402596237150031592537115379371492921493187801751325863151891734217010117342181617905134572627537117814923380149332550630989120213917440684801929935128633076380573254472758195754148819939053927224800627133930423463016702126665302423856442458422350991377973588747899182832250710576593325548479037481941341436937885174058150841478119906159362901024088455001320472310055863435215140420284760282688377835845018868133471601993811109191431564713685195003911957535750709178230
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................201734571.00734571000012520114901318102100187347781107388400436321749219496111329360359562225343319110111263804424475223578761192124351728917831021791951341800000000000000000242305204275254534129612231723510783982710713221800516421217247285634360551541792334197181241266161152238148433833671465433164116132008535234102055153790066199511911929883130623397626351420633427778232843821128187151172008104721103175012069051578113219199041183339926766612585115811341815622922426185636181389970019863331023270000029380159735332102865904468313614322233203523452233341420742140233434101575396345591192297679200568479104378812212564137317391365132632471527135821211286179014772935670348620092783215014445087478414231145133156014158237689396819356917336967099302046806423142914142745149459331318662038860744494509081242555163023361531442426222937702918744842506925536815514010972653798871081730998144856937161502077155398817145404527862052244191784347432402350530473408327833145863478895566
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................231335388.0033538800006404235121412331700246523179120179700000000745375235237167134116671581021052062161841335125121000000000000000000000213207150220123912815112691071718114324174059169217095235155547981045344531201210133697910303976691374731729915160940000121121103401834942430520715460034944523311594554425773031131223154436788311394072127127790510171135127837249165966110482175240392948417713009593641156279948597222175178200002314158117110266815911099255885321325184799613381484187612441320129214881386671440019214128309100470868723715484466311303382112822329033171348017724801673968385209124628819487191432358311038796412212107574085173952689168632045103563278113021152712494348936752260320252059259132613573449962594124732192136852228693212062803167011783102317041619288706282637676840821479227275314180785522146102419082636185830003132428588083627156
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................231328977.00328977000021211231002520020013222451601111800000005334194102114530897965243653679701015367097733475552030880000000000000000000003024233623251411165249978211513615967362012263621071532141541462120864815225153220404167702482819105950543626291327328551234310316447914101046846661115228113581314952012303944244271581461820971756755155157510184892510325332421551495232987155978752195482101288029171085400108741015964272715451781236161412925931251240895148203371606051560013279132418272176403611381243371831253078133190120145148274208605729081168134373770160236132826539941101394294583845329846022238131513252541224505496409551240217630256010530727584203050561666810755837386561424454726894354636821602351081823788133028136772218803253420891312135496386163879344
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................211107907.00107907000013011100040000006530161029374177261431202211513551611331935828151413783144530995783866351591181316708113000000000000000006175797211359836822641402710122331191818111397126875813506510115941331564723022532623000081061121592071941661423366565437936207744185579762310010069711722125327830636234202243120281362715194916766115184214778481169754126110747124615193790000023620300046025020967683428130710203628768811015537770915236351701100318204177271495158212246998325457674326101459499411995686890812804761009944180547634106413234549383444523348613343624320494222933209426954244118610111920933127059730219137941136346766021976342677371512422560034523202893939666116487821131811132104895682442166758272169589339248723790660985125377
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................20184940.0084940000000000000000000005257100084651013242101514016018383145651652901607117716092295247378179104000200000000000000000001520261300000133000001410000031156910211000014121070147343120490312004211131363346355264166337257333246382359308520244201003141221141097512082840363135522381751411320377335551541392401339520079110573000001025000200177101943544701912472381041911472771951462871761283000000414122110223258155177230161134118852832142083184661253372864176012707797631244802215131257359398163721491511987326110489375904442515502369447556355525327701852141207026242735258126789931913917413317028832416261174219433010346037356783393143460322945302081402931821442376931194134914520
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................22179686.00796860000913411121112772213070035346180183000000006445178366625190109120291072768115199141685005000000000000000000000291929331511616685416161248121219269253942384685860105933723683251073053181302946502243124003112974140208785128569140311317520411814680212174179189136011071079267640143217012631361653510114118501951360420357244751330003356613200000113353501000061693911220513042783844304346841101951617381601020043700714751191651651735212111623526597165349118111385771961481683164133545827921511023714792593181901514704816426755145093516673265167312308702744152983834817212452920727654611611734409553652468109611930668029231921932227011227791517411952914611181681392763172319252460785816831
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................19149545.004954500000000000000200000121825801955311116809323313102145849211029138715361410100003920800000000000000000586875741000612912502502241024002554224237230117011021412820216029470403962481330336600003101258452663738592734133201947231020351113027654224516527256701319157104168711237213782291231881743302971621041615600011301815200000926606820085951041031481089758243112817111350165429245500000281914852150419767954923607192297296177115319605811882771631176134151461298208454112262031016125811662261037233132210642227555128310123968575996579911006114794464508491313682313119356243170246147137435142401102082451018414056575348721383961581732082892494079701603215
.................................................................CAAGAACTTTCTCTGTGACCCG....................................................................................................................................................22145532.004553200002381713144321910019001913815001041194637100275227334114118264491520652876112280361800054708000000000000000002035263212327962252506627910638810630626383240127492120550954370943210012044288246972465460180151347022928291100316090193148742345818352811055998101859103003214787114839613715201021444452953129844224190175860011828252025500150131530021251600100015010348494363162414095028678131301766169511242441292111100615315250331246192345503970343562033344898165635037333578018143545411916620134312072681891539844917378112367113259732913926991553101881571175662543521165134761070861813121938471065166726125058025515718175540399718398541175613411012111962873783261139205540
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................23139583.003958300000043101001100000134361003000000005128208275214285805117109449767127212800000000000000000000000111209272830830400010021650010002131922421151037020020012020310000612130014466610254353761495536228160514959856200000300100415030023010801000062101192931113400013790000001738752201003043617292288267228122346767214733300715100211402656713615112721246156144512431313326497152121663231175490913948698202100181442815815113724210092186463922633041855891887471155583164226301252510732413333223315361120
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................21135410.00354100000114100230192002103412404418000000001410104121123226141061962571081389105910000000000000000000000171415171330033101142231026411003316171217112835200014160130408520022754340010001102752354121224252217381714151601000409100228379221107731190600027703541835124206419691489392191731300054015421000003180010002402001381746322563534146641003993139622201000116457089176701081261023198080166936061146572638512313049481199468451143287763331378112642918154614275282268269307232193163441812554413035623113014867973877182911911297115731666133173926332955547208667149856354837467357622599571121353302879973007260
...................................................................................................................CATCACAGTCTGAGTTCTTGCATC................................................................................................24119752.00197520000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182451505000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................22115142.001514200006723592652007010062201203280000000011218849295443113773431601213271000000000000000000001314151651231612538231895118064720307302410386463461154242413032180110185440111116010105131310262310121447413429342826773410000367311343338265051741513102211481403202690491315201230080136000001116001000531512817714301436573108151106952334199232000211917112612246551362728321985528013720916134859162348379185961151138417730563211736111107441215748978295514733037577279130372254533735317214466111232579741330569711459105134302991591502441136229630226632276464921311008
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................21113035.00130350000131114112010001004117021290000000024712423613575746921211937022213000000000000000000004112171701269621100037120002170162715276500011722540501352819115160110002042328231214636101914302419161500100431371810939700160063001716631301037411828169140006065000004130000005331371971650620255313512002116390016112183012769521105611914047195107137369039687654143271481043111179175404141527044741449222148264122111947719328060806118112131551298183416941571243564945641254191538510139715196715536268738224215201951661951520
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................18112221.001222100000000000000000000121100001725000000112916514536642182149136240571316000420000000000000000001681681215700000020014010001003300073001000021111140205430020340100301115092440107391076561771022546541500400652010991651580433344073356362092446417176181813436020800000030000001914169110045389433481116472699390692778300000002619134362515149511433306434704474856542851507423962903447266743441102127117125852842297681322286723162442417212579163102513048710232275037716656645148354115428135244219308142
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................24110819.0010819000000000000010001003200001400000000651044342652110555100000000000000000000000125800000013510620082100041209133471200102621517016094220518400000000000710016658361641012001002208651852640363023160192514790000201275606464100120475000001130000004829376751185461606783845763930023110071024106745312112626374381061616264132138298345176341392274715141231929147481734524432124952958565223184106121461662182655101549550169843368251395813614112471372051771881744681123055123901033855238313510
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................19110774.001077400000000000000000000672003751000000312111851361021121115117321312108000000000000000000000001254000000000000100000000000020000000010941100040504100000000004462222112512222025461515238000003813281001016284201421822420125424201219221532251934223001902333000000500220089413516322963172119172437163142309010006522109229109420111340152223358411836382375602316143762058245311197471257359885057337101472551924329397835243117763654174399571421361052042116186463896012361251578416439988462245334343240373678451030
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................22110360.001036000000000000000000000380001400000000224391112224329344215551372610000000000000000000000000000000400110000000000001004000000000000000000020000000000000001012214819916021513539232895649290000090010513020000001010000310126415200207147000005300020003021216113218115181320355003151004311330013305232434157890371227163551961446308190822916951349048211036951340000108531162184526215133221162291510131427289142300154135630245131350230
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................2218575.00857500000000000000000000641002750000000041511133126831474510000000000000000000000033310000002000000000000000004800000000103000000500021000000000008613129151817122216221060000038810401374908003305142280138112767192111134020161180000002700000066382952313109315510992230090000861622910213531263321162092413503168374441223763120186540915691479607825341647265203535255316942573813435112612610433429053456182536618811575810095101107431144419283225746689179820
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................2017533.00753300000000000000000000112330736800000000432368362784125212771523000000000000000000000001010000001221041000000000202004000000001131010201016821280020000000615131382421419472323315001024268292479283801200541104117002853272112522730003092000001800000034341815102100038052601540000731166186022473544981217351721143446115801340735547536288376212611828392057163887171230632861111043837117127109333918273461637262925536131231020328153563834125219238586113628422740
...................................................................................................................CATCACAGTCTGAGTTCTTGCTATC...............................................................................................2517020.007020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000180000000000000000000000000000000000000000000000000000000000000000000000000020100011000048342167000000000000000000000000000000000000001200010000000000000000000000000000000000000000000000000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................2314863.004863000000000000010000001101007000000001526422319619965724161000000000000000000000000031036161492332012104520063601068940202100176020206241220002002000329283136712131014103936232300000120003089051193230432010101212244360009016200000790000109351620573412242039212327710611519008305101415101969151141011111311303181762141155192991196233310741670416362042393033843443950171161717642626113392241486824552342444346261485705441112112595295185406
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................2414268.00426800000000000000000000110000100000000226031333263778881000000000000000000000003104041083120001013110002003281000020050210101000002100000000007881151324615165132611660000010010003030011010507000050526152191005329110000011220000001026143055393442803467841000668280034122120102162510031559410412191048377316111421118601753209410132620172183133132217027618191473915689682009381812200113081012121847434110
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................1814081.0040810000000000000000000047040030195515240001000100120030010000610100000000000000000202016210010018500400020500343038181000210010089000030034261012554828000021520400448458000020300103223358127114015502315552026313609232521372711750005030000000600000031152914142018754920754410715338000065647522113011026114522671311125167542456442126113103103121989715639383244496121573252020292323056243000211350110630002444056
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................2213683.0036830000220212105500000010120090000000001031031720310111642142161000000000000000000002228020161211201010200300119068883401011004403012118010610011101030111815168106141251026500000511521432322702625181513563601715102521243680000074000002700000043142416131412261211985700800005303748121021211966211618113433015202561614614171649919419445177269426227949153254673430562314106641543413126233618386171162015911177401942144215423472299710212
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................2313287.003287000031100000001000000000009001670101042301430331132210001225113000000000000000002937000651300001001020000150561006100012408603002601023000100110031526249374452471830000020303852734013001710180192270134015072364800030150000001170000003706843196512201081031001310004203314433428925222515621502221031216751136156481954823329120111213222109787212014643351641153714211513877222714810121132533161101158221089382231100
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................2112828.00282800001000000211000000000000150000000011301245530130105233163100000000000000000000001000000001100002000000010110914001000001210105010101100020000000412505153227120000061034141170400170512242800518301602430001000000000000000030021101433152522051450000411218322329142328219283419102212131111399272642622408425185978594561212116956452628197734374615594182099910856624241238231060871931111153210226102490
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................2012520.00252000000100000000000100021000700000000210110140010116402330022000000000000000000341224001021421800034300435012233610311123300100001120001000100101302510113021204110000042034512879015004513002100211623183711000400000000000000002014978131031071055192011000010701117236111018215791748843100559602012178343337824442063523114111334543109310240274872526315245417151141310101731144717141252812242752
.................................................................CAAGAACTTTCTCTGTGACCC.....................................................................................................................................................2112094.00209400000000300000000300000000000000000010010050200000121000120000000000000000001210123191320300235012005103003450374443273151121411420100110005100010000002280010200110303412376960601124013006811209534301312001600100000000000001000000043595001501046180195111105134181120000001003181211182423521386381672994482918786210333811371671720003210512400040092132252026310756011100007811090
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................2112002.00200200000000000000000000000000400000000304473103522033223100000000000000000000000001000000000100000100000000002001000000000000000010000000000000823453024315471411390000010703022030011000201000015002831000003000000020000001002105121211319100400000200323002422161020463916112514304443625740264452841612478203869121260032123228311122531017684761011164220017405344201619390
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................2311319.001319000000000101000000200000019000000003001000310101111010000000000000000000000000110000111000000002000000002250300000003000000000000000000000001224361140203000000006044001302021100040600002103031300031400000017000000493020199761120611900242500000222301011203514109224013342510012126919952110984123403127913950000913612635221615281678722173081512092994874111515350
.......................................................................................................................ACAGTCTGAGTTCTTGC...................................................................................................1711291.00129100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000100000012000000000000000000000000000000000000000000001971545675962183811825715484107152100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CAAGAACTTTCTCTGTGACC......................................................................................................................................................2011280.0012800000000100100000000020020000011200291010001010000011010001331000000000000000003134900004292400100000100206025336774819000070130000100001110000000000000000000000000024519000065170310121102050010100030010000000000000000000003220110121910138126158211600000010022114121293142003111036122490612129503020112641212311131000021000008104100003208221903100501110265380
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................2211267.001267000000010000000000002300000000000014015210100413014212100000000000000000000000000000000000000000000000000000000000000000000000000000000002000133538182773214110822100000000000000000000000000000000052200030000000057000000000122001220412000100000100100000000010000000100000000000302194721635276438000000001100000717480100037826510000201100001324011010
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAC................................................................................................2411166.0011660000000010000000000011000010000000000100064112018901000000000000000000000000010100002200000000000000000003002000006000000001000000000000000010292162220004500000000000000001000001020200000001813000010600040713000000000220115911212514142430011012500000010211000000020000000000000000017134391312516513432000142121311110151110170001261522010102000001113313001630
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................1911136.001136000000000000000000001001000110000000100200210110330000001000000000000000000041241200006010102000114021430171415100010100120000060000000001010300310027124660000000002944000121001531018317101100101110042101000002000000000000001024862084131838871002000043000230410102284915637157044125100472359256326281740100213363111715021020424035103431128620070025442213122
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................2311130.0011300000010100000000000000000000000000021700165103021032040000000000000000000000010000102110001000000000000011000000010000000000000000000100000031318259157230201400000000000010000000000001000101060000000010000039000000000310010530659130000000021010100101200110202100011000041102516832131232151747001110111181000031161617101053718111001300203000413843011310
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................2011030.001030000000000000000000000000000000000000100101801000014110000000000000000000000000104000000000000000000000002110000000000200000010201000220000000340031316511160000058106393242550400110101000021261009011040000030000000200000043200029114178251431010000000210142024500039010271262216324790146562733527310221793919412225142911662301021426140153424502703022005430
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................201875.008750000210100000000000000040050000000122200020101100210002000000000000000000000100000000010000000010000000010300100000011000000010000011000000240021302230000000007117106402000014050100001151812410006082000000020000068213640310010330040000002322211561423217072443862184414633925635439110132319119112013013153725574125181936165212717012222428283335154120
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251851.0085100000000000000100000000000000000000000001100112020100000000000000000000000001102000000100010000020002000020200000000020002040000100000000000120000100721600000010000011105001300081105000160316040000001400000030000000202010112616475212001000000031310306483216203329162132150565212848531415522042012812100030151350941121024101286447136506538241069224039210
...................................................................................................................CATCACAGTCTGAGTTCTTTT...................................................................................................211800.00800000000000000000000001000007500000000010000162013034611000000000000000000000000000000000000000000000000021000000000000200000000401500000000000130121441411000000020112101232010000000100001421010011000000000000010000002400000020001002003000001017211815610174374262014122719113523711481690241203010741317473023072330031132240002301101310130117010101642060
.................................................................CAAGAACTTTCTCTGTGACCCGT...................................................................................................................................................231786.0078600000000100000000000011000100000000000000110001110110000000000000000000000001011000000540000000000010006715904100000010000100010000000200000001001100130150000005084003301013000052710250061200000004000000000000007861112175491781612200400000000322402210311210515702050159422212420221213571006538107020622923252101714100969013182116151740152758174712100
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................181781.00781000000000000000000000100000000000001050001001211100130000000000000000000000033020000001000000000100100005000000000000000000000000000100000002206351321020220000010112810402010025140014002019033010000001000000010000001981415310010010010030000301101011112061148133471510110327550148173414418203333115455132201616100020204312136031021071401321341074570
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................181753.00753000000000000000000001100003000000001010200112010110000000000000000000000000020000000000000000000000000000100000000002000010100011006200000000200130003140000000003230012020032120204103651210001000000100000000010005940022111200011004000010202301014025441608512214821843121090831525646221441020418100212146350253105445122100100410070439410346319220
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211706.007060000000000000000000000000000000000000001012001112250000000000000000000000000211000000030111000022001000030000001004000000010010000000000000020000413120000000007332445375403000002020000015736101000000000000000001000000411011019939401339110000000001000211222022031002111132141034311102315021112500140010022231111111000614018092200420002122120
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................231675.0067500000001000000000000000000300000000000000010001030000000000000000000000000000010000000102001000200000010021000001000100000000001000000000001110000210000100000070060033000000000001000741101020001010000000000000032000009073710310000000010231402120230415162500020665943043894346862174721789121022100124666451135102849704101314150213402425710730
droSim2
------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCCGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-CGA-A-----ATCCTCGAAGCAACATTA----------------AG----C------------------GAAATA-------------ATGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211577034.005770342609334328725724973222708337855388135024329131791549265321001989123
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221448901.004489013032555191098418521172057141691911522741611713250195954488283707386169
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................201206204.00206204124470346051086433103051068899778847162335136174841571001
.................................................................CAAGAACTTTCTCTGTGACCCG....................................................................................................................................................22154637.00546372623224592413675345185271672069420528001
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................23125977.00259771222816348700745169325123321916198002210001
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23121109.0021109673517887244790049494468830445322302759001
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................23110905.0010905179119286002580236930681738406301102000
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2219947.0099476452133243940019622092180313155745971413001
.................................................................CAAGAACTTTCTCTGTGACCC.....................................................................................................................................................2119352.00935248204423707862614613121411300000
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................1917413.0074137521461511076724398696439343743421723000
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................2217307.007307484263514892500108773013741310000
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................1815844.005844104122610811968306021263221330000000
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2114524.00452433785842655001741474441522003000
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................2113980.00398015433341210410511500734613445533000
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2012798.002798461884168038236222103548069303000
.................................................................CAAGAACTTTCTCTGTGACC......................................................................................................................................................2012649.00264918442055391392015840100000
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................2211834.0018349642195197002227301627300000
.......................................................................................................................ACAGTCTGAGTTCTTGC...................................................................................................1711462.001462000000217101442000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................2311249.001249903358192155946493316100000
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211886.008865101605747005250107200000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231843.008435336278700555988151701000
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211823.008234171593360005738172142402000
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................191741.0074120643191810024262814195401000
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181726.00726675153342316910559615000
..........................................................................................................................GTCTGAGTTCTTGCT..................................................................................................151571.005710000008968540000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................241455.0045520279153900373000182905100
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................241403.0040361210098121946171011000
...................................................................................................................CATCACAGTCTGAGTT........................................................................................................161371.0037100000011858339000000
.................................................................CAAGAACTTTCTCTGTGACCCGA...................................................................................................................................................231364.00364309281600044011001000
.......................................................................................................................ACAGTCTGAGTTCTTG....................................................................................................161314.003140000000026306000000
.................................................................CAAGAACTTTCTCTGTGACCCGT...................................................................................................................................................231282.002822011435000811634000000
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201249.00249246677112689188200000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221249.00249000380024231171331300000
...................................................................................................................CATCACAGTCTGAGT.........................................................................................................152215.0043000000056418397000000
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................221174.0017426201900262441205200000
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................181159.001597464500773249200000
...................................................................................................................CATCACAGTCTGAGTTC.......................................................................................................171158.00158000000201124121000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................231154.001542151300234031222402000
.........................................................................................................................AGTCTGAGTTCTTGCT..................................................................................................161134.001340000005330123000000
..........................................................................................................................GTCTGAGTTCTTGCTA.................................................................................................162126.002520000001612345185000000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221125.001251062370017128030201000
........................................................................................................................CAGTCTGAGTTCTTGCT..................................................................................................171122.0012200000016102589000000
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211119.0011920312004344852000000
.........................................................................................................................AGTCTGAGTTCTTGCTA.................................................................................................171116.00116000000181530152000000
..................................................................AAGAACTTTCTCTGTGACCCG....................................................................................................................................................211115.001155094090030011101000
.................................................................CAAGAACTTTCTCTGTGACCCC....................................................................................................................................................221114.001145774900000001000000
.................................................................CAAGAACTTTCTCTGTGAC.......................................................................................................................................................191113.0011359316032731010000000
...................................................................................................................CATCACAGTCTGAGTTCTTGAAA.................................................................................................231109.00109110500251246142300000
...................................................................................................................CATCACAGTCTGAGTTCTTGTA..................................................................................................221105.001058012030011403100000
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................22195.009500014005418147600000
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................19195.0095111591012190332200000
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................21190.00902002800274435800000
.................................................................CAAGAACTTTCTCTGTGACCCGG...................................................................................................................................................23189.00896791300000000000000
.......................................................................................................................ACAGTCTGAGTTCTTGCTA.................................................................................................19186.0086000100010084000000
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................20184.008440142400033116100000
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................19182.008218113621313006100000
.................................................................CAAGAACTTTCTCTGTGACCCGC...................................................................................................................................................23182.00824131303468220000000
........................................................................................................................CAGTCTGAGTTCTTGC...................................................................................................16181.0081000000320274000000
.................................................................CAAGAACTTTCTCTGTGACCCA....................................................................................................................................................22177.00772174000011131200000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAC................................................................................................24176.007660600013181874400000
.................................................................CAAGAACTTTCTCTGTGACCCT....................................................................................................................................................22176.0076683500000000000000
.........................................................................................................................AGTCTGAGTTCTTGCA..................................................................................................16161.006100000013915222000000
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................20161.00611585110077113300000
.........................................................................................................................AGTCTGAGTTCTTGC...................................................................................................15156.0056000000012053000000
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18153.00531101125312126000000
.................................................................CAAGAACTTTCTCTGTGACCCGCG..................................................................................................................................................24152.00525080151802000400000
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23146.00462810220003001000000
........................................................................................................................CAGTCTGAGTTCTTGCTA.................................................................................................18144.0044000000014237000000
.......................................................................................................................ACAGTCTGAGTTCTTGCTT.................................................................................................19143.00431100000100030001000
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................20142.00421430400422310000000
...................................................................................................................CATCACAGTCTGAGTTCTTGTAA.................................................................................................23141.0041623000381151200000
...................................................................................................................CATCACAGTCTGAGTTCC......................................................................................................18138.0038323200000100000000
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................21138.0038232610010005000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................23236.5073001000121022163900000
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18134.00341661100000001000000
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................22133.0033234600000000000000
.......................................................................................CGTG----------TACTT-AAAAGCC.........................................................................................................................16127.00270000001210221000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCAC.................................................................................................23126.002631200054830000000
...................................................................................................................CATCACAGTCTGAGTTCTTAA...................................................................................................21126.002620030033752001000
........................................................................................................................CAGTCTGAGTTCTTG....................................................................................................15126.0026000000220121000000
.......................................................................................................................ACAGTCTGAGTTCTTGCA..................................................................................................18125.0025300000000022000000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTC.................................................................................................22125.0025212100110016100000
..................................................................AAGAACTTTCTCTGTGACCC.....................................................................................................................................................20125.0025120900013000000000
.......................................................................................................................ACAGTCTGAGTTCTT.....................................................................................................15124.0024000000001023000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTGT................................................................................................24123.0023182100010001000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................25123.002313030032110306000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTACA...............................................................................................25122.002201000073632000000
droSec2
------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCCGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTG-CGA-A-----ATCCTCGAAGCAACATTA----------------AG----C------------------GAAATC-------------ATGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221239020.00239020104794298386592238466
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211180684.0018068444406429151499878365
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20131717.003171713514823311638807
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23113652.0013652240938295956819
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21110194.001019472444791644827
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2015545.00554530256133361571
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2214680.00468012386429131887
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2313743.003743106244410321205
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2112837.002837365829341609
.................................................................CAAGAACTTTCTCTGTGACCCG....................................................................................................................................................2211720.00172056392815250
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................1911600.00160044657531044
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2411314.00131416616928951
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................1911015.0010158146122118
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211963.009634701457341
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................231729.0072913036431132
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................221527.00527187116118106
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211493.0049343692919
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................201425.00425611362226
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201423.00423359143812
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221379.003791695017143
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211253.002532166229
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181248.00248271717232
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221186.001869584340
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................221179.001793995639
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211161.0016170161758
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231149.0014948122168
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................231139.001391148476
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................201135.001352466144
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191134.00134122354
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................201128.00128926525
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251119.001191420481
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191105.00105756177
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231102.00102477543
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221102.0010239131535
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................24187.00878281833
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................18186.00864111133
..................................................................AAGAACTTTCTCTGTGACCCG....................................................................................................................................................21177.007771150
.................................................................CAAGAACTTTCTCTGTGACCC.....................................................................................................................................................21162.006252442
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................23157.0057122142
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................23156.005656000
....................................................................................................................ATCACAGTCTGAGTTCTTGA...................................................................................................20154.0054354015
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18153.0053270125
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................20152.0052286018
...................................................................................................................CATCACAGTCTGAGTTCTTGTA..................................................................................................22148.0048915321
....................................................................................................................ATCACAGTCTGAGTTCTTGCG..................................................................................................21144.004444000
.................................................................CAAGAACTTTCTCTGTGACCCGCG..................................................................................................................................................24139.003900372
...................................................................................................................CATCACAGTCTGAGTTCTTTT...................................................................................................21134.003434027
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................18134.003423128
.................................................................CAAGAACTTTCTCTGTGACCCGT...................................................................................................................................................23133.0033136410
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................22131.003124052
...................................................................................................................CATCACAGTCTGAGTTCTGCT...................................................................................................21130.0030710103
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................22127.002780127
...................................................................................................................CATCACAGTCTGAGTTCTTGAAA.................................................................................................23126.002641327
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18125.002523002
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23120.00208318
...................................................................................................................CATCACAGTCTGAGTTCTTTA...................................................................................................21119.001911008
...................................................................................................................CATCACAGTCTGAGTTCTGC....................................................................................................20118.001851012
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................21117.001710223
...................................................................................................................CATCACAGTCTGAGTTCTTAA...................................................................................................21116.00163805
.................................................................CAAGAACTTTCTCTGTGACC......................................................................................................................................................20116.001610024
...................................................................................................................CATCACAGTCTGAGTTCTTGTAA.................................................................................................23115.00152625
...................................................................................................................CATCACAGTCTGAGTTCTA.....................................................................................................19114.00141607
.................................................................CAAGAACTTTCTCTGTGACCCGA...................................................................................................................................................23114.00147025
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................24114.00149005
...................................................................................................................CATCACAGTCTGAGTTCTTGCCA.................................................................................................23112.00127320
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................24112.00120525
...................................................................................................................CATCACAGTCTGAGTTCTTCA...................................................................................................21112.00126105
...................................................................................................................CATCACAGTCTGAGTTCTCT....................................................................................................20111.00119110
....................................................................................................................ATCACAGTCTGAGTTCTTCT...................................................................................................20211.002222000
droYak3
------------------------------------------------------------CTTGTCAAGAACTTTCTCTGTGACCTGCGTG----------TACTT-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-CGA-A-----ATCCTCAAAGCAACATAA----------------AG----------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221569363.005693634218123656399099852478021495411008853158
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211138275.001382753685328084338683970903817773866020522
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................221107526.0010752678214310650362741240000
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20125252.00252521213465384202331288263820001000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23116131.0016131226153933374261950192519660010
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21110834.001083499398791941162252010000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2313433.003433321624772679871391000000
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2012868.00286868206065561683471040000
.................................................................CAAGAACTTTCTCTGTGACCTGCG..................................................................................................................................................2411897.001897342771267274162270000
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2211867.0018674681863312353130640000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2411150.00115016147429151142301270000
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................211919.00919316119299882051530000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231845.0084526558445172226120000
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................221780.007807077300000000
.................................................................CAAGAACTTTCTCTGTGACCTGC...................................................................................................................................................231729.007293012654301110000
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................191689.006894229120285221280000
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201608.006082460121426130000
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211576.0057612354301530000
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................191549.0054913478021525160000
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221538.005381533135362920000
.................................................................CAAGAACTTTCTCTGTGACCT.....................................................................................................................................................211504.00504163533050100000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221459.0045943711201523340000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231399.003992506257391800000
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................211256.002562524800100000
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191254.0025451479420240000
.................................................................CAAGAACTTTCTCTGTGACCTG....................................................................................................................................................221242.00242191220171200000
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181215.002159828210913100000
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................181198.0019892157402600018
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211187.0018743591211213830000
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................231175.0017519230432340000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221133.0013301161113110000
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191116.001161106602100000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251116.00116733121933210000
.................................................................CAAGAACTTTCTCTGTGACC......................................................................................................................................................201114.001142009400000000
.................................................................CAAGAACTTTCTCTGTGACCC.....................................................................................................................................................211114.001141609800000000
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211105.0010561141726500000
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................20197.009725113341140000
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................23188.0088088000000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................24166.006611817103890000
...................................................................................................................CATCACAGTCTGAGTTCTTGTC..................................................................................................22158.0058115600000000
...................................................................................................................CATCACAGTCTGAGTTCTTGGC..................................................................................................22151.0051005100000000
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................18149.00498251003120000
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................23149.0049134104540000
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................21146.0046041021200000
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23146.00468121803410000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................24146.0046824104720000
.......................................................................................................................ACAGTCTGAGTTCTTGCC..................................................................................................18142.0042303900000000
.....................................................................................................................TCACAGTCTGAGTTCTTGCTT.................................................................................................21137.0037034000120000
.....................................................................................................................TCACAGTCTGAGTTCTTGCC..................................................................................................20134.0034203200000000
..................................................................AAGAACTTTCTCTGTGACCTGCG..................................................................................................................................................23132.0032030200000000
.................................................................CAAGAACTTTCTCTGTGACCTGCGT.................................................................................................................................................25130.0030152210010000
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................22129.0029024310100000
......................................................................................................................CACAGTCTGAGTTCTTGCC..................................................................................................19129.0029002900000000
.................................................................CAAGAACTTTCTCTGTGACCTGCC..................................................................................................................................................24127.0027002700000000
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................24127.002794503600000
droEre2
------------------------------------------------------------CTTGCCAAGAACTTTCTCTGTGACCTGCGTG----------TACTG-AAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGCG-CGG-A-----ATCCTCGAAGCAACATAA----------------AG----C------------------GAAATC-------------ATGGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................CATCACAGTCTGAGTTCTTGCT..................................................................................................221316587.0031658716908862955106398118314203426998
...................................................................................................................CATCACAGTCTGAGTTCTTGC...................................................................................................211188866.00188866448416458113171910217691025710
...................................................................................................................CATCACAGTCTGAGTTCTTG....................................................................................................20132237.0032237169038910481374984905224
...................................................................................................................CATCACAGTCTGAGTTCTTGCTT.................................................................................................23121576.00215764526365746132513410244429
....................................................................................................................ATCACAGTCTGAGTTCTTGCT..................................................................................................21114280.00142801166917413011012199780
...................................................................................................................CATCACAGTCTGAGTTCTTGCC..................................................................................................22113256.001325620812857269421140
....................................................................................................................ATCACAGTCTGAGTTCTTGC...................................................................................................2015944.0059443077181333872219560
...................................................................................................................CATCACAGTCTGAGTTCTTGCTA.................................................................................................2313877.003877185515857201339117196
...................................................................................................................CATCACAGTCTGAGTTCTTGCA..................................................................................................2213496.003496138515710811825214760
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTT................................................................................................2412818.0028184082547287202634
...................................................................................................................CATCACAGTCTGAGTTCTTGT...................................................................................................2111651.001651263789224810420
...................................................................................................................CATCACAGTCTGAGTTCTT.....................................................................................................1911449.001449407268102017610
....................................................................................................................ATCACAGTCTGAGTTCTTG....................................................................................................1911252.00125210070121921400
.................................................................CAAGAACTTTCTCTGTGACCTGCG..................................................................................................................................................241997.00997418991111937201112
....................................................................................................................ATCACAGTCTGAGTTCTTGCTT.................................................................................................221863.0086333921121843250
.....................................................................................................................TCACAGTCTGAGTTCTTGCT..................................................................................................201703.00703573353129710
...................................................................................................................CATCACAGTCTGAGTTCTTGA...................................................................................................211694.006941288323155080
...................................................................................................................CATCACAGTCTGAGTTCTTCT...................................................................................................211518.00518448313010260
...................................................................................................................CATCACAGTCTGAGTTCTTGCTC.................................................................................................231431.00431120371010402104
...................................................................................................................CATCACAGTCTGAGTTCTTGCAA.................................................................................................231400.00400298131338434
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTTT...............................................................................................251344.0034436060462515
...................................................................................................................CATCACAGTCTGAGTTCTTGCTG.................................................................................................231295.00295831011171830
...................................................................................................................CATCACAGTCTGAGTTCTTGG...................................................................................................211274.002742423322220
...................................................................................................................CATCACAGTCTGAGTTCTTT....................................................................................................201210.00210540138271080
.......................................................................................................................ACAGTCTGAGTTCTTGCT..................................................................................................181186.00186257715201120
....................................................................................................................ATCACAGTCTGAGTTCTTGCTA.................................................................................................221178.0017812710914270
...................................................................................................................CATCACAGTCTGAGTTCTTC....................................................................................................201158.00158992217470
.....................................................................................................................TCACAGTCTGAGTTCTTGC...................................................................................................191157.001571321005190
....................................................................................................................ATCACAGTCTGAGTTCTTGCA..................................................................................................211146.001469301111400
......................................................................................................................CACAGTCTGAGTTCTTGCT..................................................................................................191141.001418583811260
..................................................................................................................GCATCACAGTCTGAGTTCTTGCT..................................................................................................231122.00122121100000
...................................................................................................................CATCACAGTCTGAGTTCTTGCG..................................................................................................221122.001226012794291
.................................................................CAAGAACTTTCTCTGTGACCTGC...................................................................................................................................................231111.0011132460153150
...................................................................................................................CATCACAGTCTGAGTTCTTGCTAT................................................................................................24196.00962541417369
....................................................................................................................ATCACAGTCTGAGTTCTTGCTTT................................................................................................23189.00891700015570
.................................................................CAAGAACTTTCTCTGTGACCTG....................................................................................................................................................22183.0083641102330
......................................................................................................................CACAGTCTGAGTTCTTGC...................................................................................................18181.0081323107380
....................................................................................................................ATCACAGTCTGAGTTCTTGCG..................................................................................................21169.006968100000
...................................................................................................................CATCACAGTCTGAGTTCT......................................................................................................18168.0068337202231
...................................................................................................................CATCACAGTCTGAGTTCTTGAC..................................................................................................22156.005615401000
....................................................................................................................ATCACAGTCTGAGTTCTTGCC..................................................................................................21152.0052103900030
...................................................................................................................CATCACAGTCTGAGTTCTTGCAT.................................................................................................23152.0052101108320
....................................................................................................................ATCACAGTCTGAGTTCTT.....................................................................................................18148.0048290203140
.....................................................................................................................TCACAGTCTGAGTTCTTG....................................................................................................18146.004641000140
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTG................................................................................................24142.0042120003270
...................................................................................................................CATCACAGTCTGAGTTCTTA....................................................................................................20142.0042160108170
...................................................................................................................CATCACAGTCTGAGTTCTGC....................................................................................................20141.004140208270
....................................................................................................................ATCACAGTCTGAGTTCTTCT...................................................................................................20141.004139000020
..................................................................AAGAACTTTCTCTGTGACCTGCG..................................................................................................................................................23140.004036000130
...................................................................................................................CATCACAGTCTGAGTTCTGCT...................................................................................................21137.003721300940
...................................................................................................................CATCACAGTCTGAGTTCTTGCTCT................................................................................................24136.003620010330
..................................................................................................................GCATCACAGTCTGAGTTCTTGC...................................................................................................22135.003531013000
...................................................................................................................CATCACAGTCTGAGTTCTTGCCT.................................................................................................23134.0034105014140
...................................................................................................................CATCACAGTCTGAGTTCTTGAA..................................................................................................22131.0031140106100
.....................................................................................................................TCACAGTCTGAGTTCTTGCTT.................................................................................................21126.002620110040
...................................................................................................................CATCACAGTCTGAGTTCTTGCTTC................................................................................................24124.002422009110
...................................................................................................................CATCACAGTCTGAGTTCTCT....................................................................................................20124.002420400000
.................................................................CAAGAACTTTCTCTGTGACCT.....................................................................................................................................................21122.002291100020
....................................................................................................................ATCACAGTCTGAGTTCTTGT...................................................................................................20121.002114000250
....................................................................................................................ATCACAGTCTGAGTTCTTGCAA.................................................................................................22121.002120000010

Generated: 10/20/2015 at 07:43 PM