ID:

dvi_9800

 Coordinate:

scaffold_12963:35505-35642 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_1416:4]; CDS [Dvir\GJ14204-cds]; CDS [Dvir\GJ14204-cds]; exon [dvir_GLEANR_1416:3]; intron [Dvir\GJ14204-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGATGAGCAGCAATTGTTGGAGGTGGAACAGCAGCAAGGAAATGCCAACGTCAGCATTGGCAAGCACGTCATAGCCGCTTCGGTATTTGCCAAGAATAGCAACAACAACAACAACAACAACAACAACAGCAACAATAACAATAACAATAACAATAACAGCTACACGGCAGCTGCTGTCGCCCCGGAGGCGGCCGAAAATTTGGCACTAACTGTGGTTGTGGGCGTTGATGAAACCAG
**************************************************....((..((((......))))..)).....(((((.(((((.....((((..........................................................))))...))))).)))))..*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060663
160_0-2h_embryos_total
 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 M061
embryo
 SRR060662
9x160_0-2h_embryos_total
 M047
female body
 SRR060657
140_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060660
Argentina_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR1106730
embryo_16-30h
 M027
male body		 SRR060658
140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 M028
head
 SRR060687
9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060683
160_testes_total
 GSM1528803
follicle cells		 SRR060670
9_testes_total
............................................................................................................................................................................AGCTGTCTGCCCGGAGGCGG.............................................. 20 3 13 25.46 331 80 58 1 4 0 33 3 15 29 37 31 3 4 0 0 9 8 5 3 2 1 2 0 1 1 1 0 0
............................................................................................................................................................................AGCTGTCTCCCCGGAGGCGG.............................................. 20 2 1 3.00 3 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ATTGTTTGAGGTGGAACAGC............................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CAGCTGCTGTCGCCCCGGAGG................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TCGATGAGCAGCAATTGT............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCAAGGAAATGCCAACGTCAGC...................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GCATGTCATAGCCGCTTCGGTATTTG.................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGAAAATTTGGCACTAACTGTGGTTGTGGG............... 30 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CTAACTGTGGTTGTGGGC.............. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGAAAATTTGGCACTAACTGT........................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GAAAATTTGGCACAAACTGT........................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGTGGGCGTTGATGAAACCA. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GCTACACGGCAGCTGCTGTC........................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GAACAGCAGCAAGGAAATGCC............................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AATAACAATAACAATAACAATAACAGCT............................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GAGGTGGAACAGCAGCAAGGAAA................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GTGGAACAGCAGCAAGGAAATGC................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCACTAACTGTGGTTGTGGGC.............. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGCCGCGTCGGTATTTGCC.................................................................................................................................................. 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GGTGGAACAGCAGCAAGGA..................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGGTGGAACAGCAGCAAGGAAATGCC............................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTCAGCATTGGCAAGCACGTCATAGC.................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AACAGCTACACGGCAGCTGCTGT............................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................ACGTCATAGCCGCTTCGGTA........................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AGGCGGCCGAAAATTTGGCACTAACTGT........................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCTGTCTGCCCGGAGGCGGGCG........................................... 22 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCTGTCGGCCCGGAGGCGGG............................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GAGCTGTCTCCCCGGAGGCGG.............................................. 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AATTTTTGAAGGTGGAACA............................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTCTGCCCGGAGGCGG.............................................. 18 2 13 0.31 4 1 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGGTTGTAGACGTTGATG....... 18 2 15 0.27 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCTGTCTGCCCGGAGGCG............................................... 18 2 8 0.25 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................GTTGAAGGTAGAAGAGCAGCA......................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........CAATTGTCGGAGGTGAAA................................................................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................AGGGAATGGAAACGTCAGCA..................................................................................................................................................................................... 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ATTGTCGGAGGCGGTACAGC............................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTTAGAGGTGGACCAACAGC.......................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................ATTGTGGCCGGTGATGAAAC... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....TGATAAGCAATTGTTGGA........................................................................................................................................................................................................................ 18 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AATTTTTGAAGGTGGAACAC.............................................................................................................................................................................................................. 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ACAACAACAAGAGCAACAATAACA................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................CAGCTACACGGCTGAAGCT.............................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AGCTACTCGTCGTTAACAACCTCCACCTTGTCGTCGTTCCTTTACGGTTGCAGTCGTAACCGTTCGTGCAGTATCGGCGAAGCCATAAACGGTTCTTATCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTTGTTATTGTTATTGTTATTGTTATTGTCGATGTGCCGTCGACGACAGCGGGGCCTCCGCCGGCTTTTAAACCGTGATTGACACCAACACCCGCAACTACTTTGGTC
***********************************************************....((..((((......))))..)).....(((((.(((((.....((((..........................................................))))...))))).)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060662
9x160_0-2h_embryos_total
 V116
male body		 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 V047
embryo
 SRR060663
160_0-2h_embryos_total
 GSM1528803
follicle cells		 M047
female body
 SRR060671
9x160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M028
head
 SRR060656
9x160_ovaries_total
....................................TTCCCTTACCTTTGCAGTCGT..................................................................................................................................................................................... 21 3 2 4.00 8 0 1 4 0 0 0 0 0 1 0 1 1 0 0 0
...................................GTTCCCTTACCTTTGCAGTCGT..................................................................................................................................................................................... 22 3 1 3.00 3 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0
................................................................CGTGCAGTATTGGCGATGC........................................................................................................................................................... 19 2 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................CGTGCAGTCTCGGCGATGC........................................................................................................................................................... 19 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CGCGCAGTATCGGCGATGC........................................................................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................CGTGCAGTCTCGGCGATG............................................................................................................................................................ 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TCCCTTACCTTTGCAGTCGT..................................................................................................................................................................................... 20 3 7 0.57 4 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0
.............TAACCACCTCCACCTTGTAG............................................................................................................................................................................................................. 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ACGGCCTCCGCCGGCTTTTA...................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........GCTAACCACCTCCACCTTGTA.............................................................................................................................................................................................................. 21 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTGCAGTATTGGCGATGC........................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CACTATCGGCGATGTCATAA...................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TTCCCTTACCTTTGCAGTCG...................................................................................................................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CGTGCAGTCTTGGCGAAGC........................................................................................................................................................... 19 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCTTGTCGTTGTTATTGTTAT.............................................................................................. 21 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................GTTCCCTTACCTTTGCAGT........................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................TGTTGTTGTTGTCGTTGTTA..................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................TTCCCTTACCTTTGCAGTC....................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................CGTGCAGTCTTGGCGAGGC........................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:35455-35692 - dvi_9800 TCG-ATGAGCAG---------------CAATT--------GTTGGAGGTGGAAC------------------------------------------AGCAGCAAGG--------------AAATGC-------------------------CAACG----TCAGCATTGG------------------------------------------------------------------------------CAAGCACGT------------CA-TAGCCGCTTCGGTATTTGCCAAGAATAGC---------AACAAC---AACAAC---A------A------C---AA--------CAACAACAACA---GCAACAATAACAATA---------------------------ACAA---------------------------TAACAATAACAGCTAC------------------ACGGCAGCTGCT--------------------------------------------GTCG------------------------------CCCC-----G------------------------------------------------------------------------------------------------GAGGCGGCCGAAAATTTGGCACTAAC-----------------------------------TGTGGT-----------TGTGGGCGTTGAT----GAAACCA----G------
droMoj3 scaffold_6500:11476612-11476810 - TTG-ATGAACAG---------------CAATT--------GTTGGAGGTAGAGC------------------------------------------AGCAGCAACAGCAGACAGG-----AAATGT-------------------------CAACG----TCAACATTGG------------------------------------------------------------------------------CAAACACGT------------CA-TAGCCGCCTCGGCATTTGCTAAGAATAGC---------GAAAAC---AACAAC---A------A------C---AA--------TAATAATAA---------------------------------------------------------------------------------------CAATAACAAC-----------------------------------------------------AACAACAATATCAAAGATGTGG------------------------------CACC-----GGAGGT---------------AACAA------------A-----------------------------------------AA---ATCCCTCA------------------------------------------------------------------------------------------------------GCCA----T------
droGri2 scaffold_15252:1692491-1692704 + TTG-ATGAACAG---------------CAACT--------ATTGGAGGTGGAGC-------------------------------------------------------------------AACACC------------------AGCT-GCAGCA----GCCGCAACCA-------------------------------------------------------AATGTC---------AACATTGGCAGACATGT------------TA-TAGCTGCCTCGACATTCGCTAAGAATAGC---------AACAGC---TACAGC---A------G------C---AC--------CAACAACAA---------------------------------------------------------------------------------------CAACAACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACGA---GTCGCCCA-----AGTTGGCTAATGAATTGGCCCAAAC-----------------------------------GGTTGT-----------CGGGGGCGTCGTT----GCTGCTG----G------
droWil2 scf2_1100000002615:1646-1891 + ATC-AACAGCAACACC---------------A--------GCAGCAGGAACAGCAACAACA------------------------------------GC-------------------AGCAGCAAC------------------AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAAC-------AACAGCAGCAGGAACAGCAACAAC---AGCAGC---AGCAACAATATCAACAGCAA---CAGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCAGCAACA-GCAACAACAACAACTGCTCGAAT-------AC----------------------CAAGAGTG-C-----------CCATGGGTGTGGCC---AAGACCG----G------
dp5 XL_group1e:1113664-1113861 - GA---GGAGCAG---------------CA---AGTCATC-GATG-AGGGGCAACAGCAGCAGCAGCAGCAGCGGCAAC------------------------CACAGC---------A---------------------------------------------GCATCAA-------------------------------------------------------------------------------------------------------------------------------CA---------------------GCAAC-----------------------------------------------------------AACAACAACAACAACAGCTGCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAACAACAGCAACAACATGGCCGTTGATTTGTCTCTCTCGGTGGCAGCGGCAGCGAACTGCAGC-AGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTCAGC----GGCAGCA----G------
droPer2 scaffold_30:82066-82274 + GA---GGAGCAG---------------TA---AGTCATCTGATGAGGGGGCAACAGCAGCAGCAGCAGCAGCGGCAAC------------------------CACAGC---------A---------------------------------------------GCATCAA------------------------------------------------------C---------------------------------------------------------AGC-------AACAGCAAC------------------AGCAAC-----------------------------------------------------------AACAACAACAACAACAGCTGCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA---CAGCAACAACATGGCCGTTGATTTGTCTCTCTCGGTGGCAGCGGCAGCGAACTGCAGC-AGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTCAGC----GGCAGCA----G------
droAna3 scaffold_13117:4522520-4522755 - ATC-AGTAGCAACAGC---------------A--------GCAGCATC------------------AGCAGC-------------------------------------------------AGCAAC------------------A-----------------------G---------CAGCAGCAGCGGCGGAA---------------------------------------------------------GCAGAAGCGGTAGCATCAAC---------G-------CTACCAACAAC------------------AACATC---A------A------C---AATAACA--------ACAACA---ACAACAACAACAACA---------------------------ACAA-----------------------------------------------------------------------------------------------------C---AATAGCAACA----------------------------------------------------------------------GCCGAAATAGCAGCAGCTCGAAAAGCAGCAGCCACC--------G---C------AG---CAGCCGTCGT----CGCAGCCGAAGTCACA---------GCAAC------------------------------GCCAG-----------CGTTGGCAGCGAC----GCCAGCA----G------
droBip1 scf7180000396022:4448-4641 - AGC-CAAAGTCGCAGC-----------------------------------------------AGCAACAGTAGCAAC------------------------AACAGC---------A---------------------------------------------GCATCAG------------------------------------------------------CAGCAACAGCAGCAGCGGCGGCAGCAGA------AGCGGTAGC----------------------------------------------------ATCGAC---G------G------C---GG---CAGCA-----ACAACA---ACAACAACAAT---------------------------------------------------------------AATAACAACAACAATAAC------------------------------------------------------------------------------------------------------------------------------AGCCGCA---ACAG---------CAGCAGCTCGAAAAGCAGC---C-----------G------------------CCG----------CAGCCGTCGTCGCAGC-----------------------------------------CGAAGT-----------C----------------CA----A----G------
droKik1 scf7180000302471:173832-174016 + AGC-AGCAGCAG-----------------------------ATGCAAATTGCAC------------------------------------------AGCAGCAACAGCAGGCGATAC-A----------------------------------GCA-------GCATCATCAGCACCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAAC------------------ACCAGCAGCAGCAA---------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGCAGCAGCAG------------C------------------AAAA--------G---------------TTGAAGCAGTCGCAGGCGGCAAGTGCGGCGGCC-----AACAAT---------------------------------------------------------------AAGGCCACCAATTTGACA
droFic1 scf7180000453872:91880-92117 + AGC-AGC---------------------A---AGTTGCC-GCCG-TCGGCCAAC------------------------------------------AGC-------------------AGCAACAGC------------------AACA-CTAGCA----TTAGCAATAT---------CAATATCAATAGCAACA---------------------------------------------------------GC---------------------------AAC-------AGCAACAGC---------AAT---AACAT---CAACA------C------C---AG---CAACA-----GCAATA---GCATCAACAAC---------------------------------------------------------------AACAACAACAATAATAATAATAGTAGCAGCGGCACGACGGCAACTGCAGTTGCAGTTGCAACACCAACAG----------------------------------------------------------------------------------------------------------------CAGCAGCAACA--------G---------------CAGCAGCAGCC------------------------------------------------------------------------------------GCAGCAGC----AGCAGCA----G------
droEle1 scf7180000491249:2450407-2450607 + GAACAACAACTG---------------------TACA-------GCGGCGCAGC---------AGCAGCAATAACAAC-----------------------------------------------------------------------------A----ACAGCAGCAA---C---A---------------G------------------------------CAACAAC-------------------------------------------------------------AACAACAGC---------AGCAAC---AACAAC---A------A------T-----------------------------------------AGCAG------------------------------------------------------CAACAACAACGGCCGCA--------------------------------------------ACACCAACAACA----------------------------------------------------------------------------------GCAA------------C------------------AAAA--------G---------------CG----------------------------CAC-----TTCAAACGCCGCATGTTCGTGTCCGT--GTGCGGCTGCC-TCTGTGTGTGTGTTTGTGTGTTAAT----GA----A----A------
droRho1 scf7180000779514:299309-299531 - CCA-ATTCGTCGCACAAGCAGCAGCAGCA------------------C------------------------------------------------TCC-------------------TCCAACAAC------------------AATCGCCAGAA----GTCGCAGTCG--------------------------------------------------------------------------------AGCACTT------------CA-TTG-------AATACCGCCCACGAGCAGC---------AGCAGC---AACAAC---A------G------C---AA--------CAACAACAGCA---GCAGCA------------------------------------ACAG--------------------------------------------------------------------------------------------------CAAC------------GCAACAA------------------------------CACC-----GCAGCT----------------ACAA------------C------------------AAAATTCTACGC---CCACCAGGAG----GCGGCCAGCTAC-------------------------------GAAAGGGG---------------------------------------CGTGGATGTGGGCGATGAGGAGG----C------
droBia1 scf7180000302041:820802-821001 - AAC-AGCGGCTGCTGC---AGCAG---CA---ACGCAGC-------AG------------------------------------------------GGC-------------------GGCAGCAAC------------------AACC-TCAGCG----GCAACGCTTG------------------------------------------------------CAACGCC-------------------------------------------------------------AACAGCAGC---------AGCGGC---GGCAGC---A------G------C-----------------------------------------AACAACAACAACAACAACTCGAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA----------------------------------------------------------------------------------------------C------------------AAGA--------GCACCAGCAGTGGGAAATCGTC--------------------CGCGGCC-----AGCAATGGCAGCACTGGAA--------------------------------------ACTCGGGC----GGC-ACA----G------
droTak1 scf7180000416016:558095-558334 + GCA-ACA-ACAG-----------------------------------------------CAGCAGCAGCAACAACAACAGCAGATGCAAATGGCACAGCAACAACAGCAGGCGATTC-A----------------------------------GCA-------GCACCATCAGCACCTTCAACA---------G------------------------------CAACACC---------AACAACAGCAGGCG-------------------------------------------------------------C---AGCAAC---A------ACATCAACAGCAG---CAGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGCA---GCAG------------C------------------AAAA--------A---------------CTAAAGCAGTCGCAGGCGGCAAATGCGGCGGCC----------------------------------------------------------------AATAAC----AAGGCCA----C------
droEug1 scf7180000409466:3032824-3033054 - AAC-AACAAGTG-----------------------------TTGCCAGGACAAC------------------------------------------AGCAACATCAGCAGC-------AGCAACAGCAACACTAACACTAGCAACTT----TAGCAGCCAGCAAGGCTAG---------------------CAAAA---------------------------------------------------------CCACAAGCAGCAGCAGC------------AGC-------AGCAGCAGC---------AGC---AACAT---CAACA------G------C---GG---CAACA-----GAAACA---GCAACAACAAC---AACAACCACAAC------------------AACAGCAGCGGCAGCA--------------------------------------------------------------------------ACACTAGCAA-------------------------------------------------------------------------------------------------------------AAGCAGC---AATA--------A---------------CA------------------------------------------------------------------------------------------GAAACAGCAGC----AACACCA----G------
dm3 chr3L:14020721-14020931 - AGC-AGCAATTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCACCAACACCAGATGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAA-------------------------------------------------------------------CAAC------------------AACAAC---A------A------C---AA--------------CAACAACAACAACAACAAC---AACAACAACAACAACAGCAGCAGCAGCAGCAG--------------------------------------------------------------------------------------------------CAGCAA----------------------------------------------------------------------------------------------C------------------A--------------TCAACAGCAG---ATTATCCAGCAACAGGCAACGGCTACTTCTGCCCTATC-----------------------------------TGACAT-----------CCTTGGCTTTGGC----GAGGACA----G------
droSim2 x:13037769-13037987 - AGC-AGCAACAG---------------CA---GCGCAGC-------AG------------------------------------------------GGC-------------------GGCAGCAAC------------------AGCC-TCAGCG----GTAGCAGCAA---CGCTT---------------G------------------------------CCACACC-------------------------------------------------------------AACAGCAGC---------AGCAAC---AGCAAT---A------A------T-----------------------------------------AACAATAACAACAACAACTCCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA----------------------------------------------------------------------------------------------C------------------A--------------CTAGTAGTGGGAAAACCTC--------------------AGCGGCC-----AGCAATGGCGGCACAGCAACATCCGGCGGCACAGCGGAC-T-----------CCGTGGTTGCGGTG---GATGACG----A------
droSec2 scaffold_1:11658609-11658817 - AAC-AGCAGCAG-----------------------------ATGCAAATTGCAC------------------------------------------AGCAGCAGCAGCAGGCCATTC-A----------------------------------GCA----TCAGCATCATCAGCACCTGCAGCAGCAGCACCAGGC---------------------------------------------------------C------------C---------------AGC-------AACAGCAGC---------AGCAAC---AACACC---A------G------C---AGCAACA--------GCAACA---GCAACAGCAGCAGCA---------------------------GCAA---------------------------------C---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C------------------AAAA--------G---------------TTAAAGCAGTCACAGGCGGCTAGTGCGGCGGCA-----AATAAT---------------------------------------------------------------AAGGCCACCAAC------
droYak3 3L:14107809-14108040 - TCG-AAAAGCAGCGAACTCAGAAGCAGCA---GGCCAC-----------------------------------------------------------GC-------------------AGCAGCAAC------------------AAAT-TCAGCA----GCAGCAATTG---------CAGCACCAACAACAGAT---------------------------------------------------------GC---------------------------AAC-------AACAACAAC---------AGC---AGCA-----------------------------------------------------------------GCAACAACAAC------------------AACAGCAGCAGCAACAACAACAGCAGCAGCAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------C------------------A--------------GCAGCAGCAG---ATCATCCAGCAACAGGCAACTGCTACTTCTGCCCTTTC-----------------------------------TGACAT-----------CCTTGGCTTTGGC----GAGGACA----G------
droEre2 scaffold_4784:14011300-14011534 - TCG-AAAAGCAGCGAACACAGAAGCAGCA---GGCCAC-----------------------------------------------------------GC-------------------AGCAGCAAC------------------AAAT-TCAGCA----GCAGCAATTG---------CAGCACCAACAACAGAT---------------------------------------------------------GC---------------------------AAC-------AACAGCAGC---------AGCAAC---AACAAC---A------G------C---AG---CAGCA-----ACAACA---GCAGCAGCAG---------------------------------------------------------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGCAGCATCAG------------C-----------------------------------------AG---ATCATCCAACAACAGGCAACTGCTACTTCTGCCCTTTC-----------------------------------TGACAT-----------CCTTGGCTTTGGC----GAGGACA----G------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCG-ATGAGCAG---------------CAATT--------GTTGGAGGTGGAAC------------------------------------------AGCAGCAAGG--------------AAATGC-------------------------CAACG----TCAGCATTGG------------------------------------------------------------------------------CAAGCACGT------------CA-TAGCCGCTTCGGTATTTGCCAAGAATAGC---------AACAAC---AACAAC---A------A------C---AA--------CAACAACAACA---GCAACAATAACAATA---------------------------ACAA---------------------------TAACAATAACAGCTAC------------------ACGGCAGCTGCT--------------------------------------------GTCG------------------------------CCCC-----G------------------------------------------------------------------------------------------------GAGGCGGCCGAAAATTTGGCACTAAC-----------------------------------TGTGGT-----------TGTGGGCGTTGAT----GAAACCA----G------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCT--------------------------------------------GTCG------------------------------CCCC-----G------------------------------------------------------------------------------------------------GAGG.............................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
TCG-ATGAGCAG---------------CAATT--------GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................GCAAGG--------------AAATGC-------------------------CAACG----TCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAATTTGGCACTAAC-----------------------------------TGTGGT-----------TGTGGG.............................3011.001000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAC-----------------------------------TGTGGT-----------TGTGGGC............................1811.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAATTTGGCACTAAC-----------------------------------TGT.................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCGTTGAT----GAAACCA----.......2011.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAC------------------ACGGCAGCTGCT--------------------------------------------GTC..........................................................................................................................................................................................................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
..................................................GAAC------------------------------------------AGCAGCAAGG--------------AAATGC-------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................AATAACAATA---------------------------ACAA---------------------------TAACAATAACAGCT.........................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................GAGGTGGAAC------------------------------------------AGCAGCAAGG--------------AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
...............................................GTGGAAC------------------------------------------AGCAGCAAGG--------------AAATGC-------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTAAC-----------------------------------TGTGGT-----------TGTGGGC............................2111.001000100000000000000000000000000000000000000000000000000000000000
..............................................GGTGGAAC------------------------------------------AGCAGCAAGG--------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
.............................................AGGTGGAAC------------------------------------------AGCAGCAAGG--------------AAATGC-------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................G----TCAGCATTGG------------------------------------------------------------------------------CAAGCACGT------------CA-TAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCTAC------------------ACGGCAGCTGCT--------------------------------------------GT...........................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................ACGT------------CA-TAGCCGCTTCGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGGCCGAAAATTTGGCACTAAC-----------------------------------TGT.................................................2811.001000000000000000000000000000000000000000000000000000000000010000
droMoj3
TTG-ATGAACAG---------------CAATT--------GTTGGAGGTAGAGC------------------------------------------AGCAGCAACAGCAGACAGG-----AAATGT-------------------------CAACG----TCAACATTGG------------------------------------------------------------------------------CAAACACGT------------CA-TAGCCGCCTCGGCATTTGCTAAGAATAGC---------GAAAAC---AACAAC---A------A------C---AA--------TAATAATAA---------------------------------------------------------------------------------------CAATAACAAC-----------------------------------------------------AACAACAATATCAAAGATGTGG------------------------------CACC-----GGAGGT---------------AACAA------------A-----------------------------------------AA---ATCCCTCA------------------------------------------------------------------------------------------------------GCCA----T------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................GTTGGAGGTAGAGC------------------------------------------AGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................GTTGGAGGTAGAGC------------------------------------------AGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------A-----------------------------------------AA---ATCCCTCA------------------------------------------------------------------------------------------------------GCCA----T------2111.001100000
...............................................GTAGAGC------------------------------------------AGCAGCAACAGCAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
TTG-ATGAACAG---------------CAATT--------GTTGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................AGCAACAGCAGACAGG-----AAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................ATTGG------------------------------------------------------------------------------CAAACACGT------------CA-TAGCCGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
TTG-ATGAACAG---------------CAACT--------ATTGGAGGTGGAGC-------------------------------------------------------------------AACACC------------------AGCT-GCAGCA----GCCGCAACCA-------------------------------------------------------AATGTC---------AACATTGGCAGACATGT------------TA-TAGCTGCCTCGACATTCGCTAAGAATAGC---------AACAGC---TACAGC---A------G------C---AC--------CAACAACAA---------------------------------------------------------------------------------------CAACAACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACGA---GTCGCCCA-----AGTTGGCTAATGAATTGGCCCAAAC-----------------------------------GGTTGT-----------CGGGGGCGTCGTT----GCTGCTG----G------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................A-TAGCTGCCTCGACATTCGCTAAGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
...........................................................................................................................................................................................................................................................................................................GC---------AACAGC---TACAGC---A------G------C---AC--------CAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGCCCAAAC-----------------------------------GGTTGT-----------CG.................................2111.00101
............................AACT--------ATTGGAGGTGGAGC-------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..................................................................................................................................................................................................................................................................................GCTGCCTCGACATTCGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACGA---GTCG.........................................................................................................................2030.33110
................................................................................................................................................................................................................................................................................................................................ACAGC---A------G------C---AC--------CAACAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110
droWil2
ATC-AACAGCAACACC---------------A--------GCAGCAGGAACAGCAACAACA------------------------------------GC-------------------AGCAGCAAC------------------AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAAC-------AACAGCAGCAGGAACAGCAACAAC---AGCAGC---AGCAACAATATCAACAGCAA---CAGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCAGCAACA-GCAACAACAACAACTGCTCGAAT-------AC----------------------CAAGAGTG-C-----------CCATGGGTGTGGCC---AAGACCG----G------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAT-------AC----------------------CAAGAGTG-C-----------CCATGG.............................2221.50303000
.TC-AACAGCAACACC---------------A--------GCAGCAGGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-------AC----------------------CAAGAGTG-C-----------CCATGGGTG..........................2321.00202000
.TC-AACAGCAACACC---------------A--------GCAGCAGGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
............................................................................................................................................................................................................................................................................................C-------AACAGCAGCAGGAACAGCAACAAC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.67200020
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.6012012000
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.6012012000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTGCTCGAAT-------AC----------------------CAAG....................................................2020.50101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAT-------AC----------------------CAAGAGTG-C-----------CCATGGGTG..........................2520.50101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-------AC----------------------CAAGAGTG-C-----------CCATGGG............................2120.50101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAT-------AC----------------------CAAGAGTG-C-----------CCATGGG............................2320.50100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-------AC----------------------CAAGAGTG-C-----------CCATGGGTGTGG.......................2620.50101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------AC----------------------CAAGAGTG-C-----------CCATGGGTGTGG.......................2520.50100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACTGCTCGAAT-------AC----------------------CA......................................................2320.50101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACTGCTCGAAT-------AC----------------------CAAGAG..................................................2620.50101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAT-------AC----------------------CAAGAGTG-C-----------CCATGGGTGT.........................2720.50100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-------AC----------------------CAAGAGTG-C-----------CCATGGGT...........................2220.50101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------AC----------------------CAAGAGTG-C-----------CCATGGGTGTGG.......................2420.50100010
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.45909000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................22200.45909000
.............ACC---------------A--------GCAGCAGGAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100010
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25505000
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.25505000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAACA---GC..............................................................................................................................................................................................................................................................................................................................................................................................................................27200.25505000
............................................................................................................................AAC------------------AA----CAACAAC-AGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.25500050
..........................................................................................................................................................................................................................................................................................AAC-------AACAGCAGCAGGAACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25505000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAACA---G...............................................................................................................................................................................................................................................................................................................................................................................................................................26200.20403010
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.20403010
.......................................................................................................................................................................................................................................................................................AGCAAC-------AACAGCAGCAGGAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20101000
..............................................................................................................................C------------------AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------CAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-GCAACAACAACAACTGCTCGAA........................................................................................2660.17101000
.......................................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCA-----ACAACA---GCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAG..........................................................................................................................23200.15303000
.................................................................................................................................................................................................................................................................................AGCAACAGCAAC-------AACAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAACA---................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15303000
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15303000
.................................................................................................................................................AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300030
.....................................................................................................................................................................................................................................................................................ACAGCAAC-------AACAGCAGCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.13100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTG-C-----------CCATGGGTGTGGC......................2190.11100001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGTG-C-----------CCATGGGTGTGGCC---AAT...............2690.11100010
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AACAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29190.11202000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAACA---GCAG............................................................................................................................................................................................................................................................................................................................................................................................................................29190.11202000
..................................................CAGCAACAACA------------------------------------GC-------------------AGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
............................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAGCAA---------------------------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................................................18200.10200020
.......................................................................................................................GCAGCAAC------------------AA----CAACAAC-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAACA---GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
...........................................................................................................................................................................................................................................................................................................................................AACAATATCAACAGCAA---CAGCA-----ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000
.................................................................................................................................................................................................................................................................................................................................................ATCAACAGCAA---CAGCA-----ACAACA---G...............................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
..................................................................................................................................................................................................................................................................................................................CAGCAACAAC---AGCAGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
...........................................................................................................................CAAC------------------AA----CAACAAC-AGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200200
........................................................................................................................................................................AA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAAC-------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
...............................................................................................................................................................................................................................................................AT------------CAACAGCAACAGCAAC-------AACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
...............................................................................................................................................................................................................................................................AT------------CAACAGCAACAGCAAC-------AACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGC.........................................................................................................................19200.10200020
.................................................................................................................................................................................................................................................................................................................................................ATCAACAGCAA---CAGCA-----ACAACA---GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAGCAGCAGCAACA-GCAACAA.......................................................................................................23200.10200020
...............................A--------GCAGCAGGAACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08100010
.......................................................................................................................................................................................................................................................................................................AGCAGCAGGAACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08100010
...........................................................................................................................................................AAC-AGCAGCAGCAA---------------------------------------------------------------------------------CAATAT------------CAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.06100010
.........................................................................................................................................................................................................................................................................................................................AAC---AGCAGC---AGCAACAATATCAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.06100010
............................................................................................................................................................AC-AGCAGCAGCAA---------------------------------------------------------------------------------CAATAT------------CAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
..........................................................................................................................................................................................................................................................................................................................AC---AGCAGC---AGCAACAATATCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
.......................................................................................................................................................................................................................................................................................AGCAAC-------AACAGCAGCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.06100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-C-----------CCATGGGTGTGGCC---AAGACCG----G------25170.06101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------CCATGGGTGTGGCC---AAGACCG----G------23170.06101000
.................................................................................................................................................................CAGCAGCAA---------------------------------------------------------------------------------CAATAT------------CAACAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24180.06101000
.................................................................................................................................................................................................................................................................................................................................................ATCAACAGCAA---CAGCA-----ACAACA---GCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................29180.06101000
.................................................................................................................................................................................................................................................................................................................................CAGC---AGCAACAATATCAACAGCAA---...................................................................................................................................................................................................................................................................................................................................................................................................................................................24180.06101000
...............................................................................................................................................................................................................................................................AT------------CAACAGCAACAGCAAC-------AACAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29180.06101000
..................................................................................................................................................................AGCAGCAA---------------------------------------------------------------------------------CAATAT------------CAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.05101000
..............................................................................................................................................................................................................................................................TAT------------CAACAGCAACAGCAAC-------AACAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27190.05101000
................................................................................................................................................................................................................................................................................................................................................TATCAACAGCAA---CAGCA-----ACAACA---GCAG............................................................................................................................................................................................................................................................................................................................................................................................................................27190.05101000
..................................................................................................................................................................................................................................................................................................................................AGC---AGCAACAATATCAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.05101000
................................................AACAGCAACAACA------------------------------------GC-------------------AGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.........................................................AACA------------------------------------GC-------------------AGCAGCAAC------------------AA----CAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.................................................................................................................................................................................................................................................................................................................ACAGCAACAAC---AGCAGC---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCAGC...................................................................................................................23200.05110000
........................................................................................................................CAGCAAC------------------AA----CAACAAC-AGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...........................................................................................................................CAAC------------------AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100
...................................................................................................................................................................................................................................................................................CAACAGCAAC-------AACAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................................................................AT------------CAACAGCAACAGCAAC-------AACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
....................................................................................................................................................................................................................................................................................................................................................AACAGCAA---CAGCA-----ACAACA---GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
..............................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------..................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................................................................................................................CA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAG....................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------............................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCAGCA..................................................................................................................26200.05100010
.................................................................................................................................................................................................................................................................................AGCAACAGCAAC-------AACAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCAG....................................................................................................................27200.05101000
.......................................................................................................................GCAGCAAC------------------AA----CAACAAC-AGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................................................................27200.05101000
.................................................................................................................................................AA----CAACAAC-AGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
.................................................................................................GC-------------------AGCAGCAAC------------------AA----CAACAAC-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGC......................................................................................................................21200.05100001
...............................................................................................................................................................................................................................................................................................................................................ATATCAACAGCAA---CAGCA-----ACAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGTGGCC---AAGACCG----G------19200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................CAACA---GCAGCAGCAA---------------------------------------------------------------CAGC...................................................................................................................................................................................................................................................................................................................................................19200.05101000
....................................................................................................................................................................................................................................................................................................................................C---AGCAACAATATCAACAGCAA---CAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
........................................................................................................................................................................AA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
................................................................................................................................................................................................................................................................................................................................................TATCAACAGCAA---CAGCA-----ACAACA---GC..............................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.........................................................................................................................................................................................................................................................................................................................................................CAA---CAGCA-----ACAACA---GCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCA........................................................................................................................22200.05100010
...............................................................................................................................................................................................................................................................................................................................................ATATCAACAGCAA---CAGCA-----ACAACA---GC..............................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
........................................................CAACA------------------------------------GC-------------------AGCAGCAAC------------------AA----CAACAAC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..............................................................................................................................................................................................................................................................TAT------------CAACAGCAACAGCAAC-------AACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..............................................................................................................................C------------------AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------CAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---C............................................................................................................................21200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG------------C-----------------------------------------AG---CAGCAGCAGCAACA-..............................................................................................................20200.05100001
........................................................................................................................................................................AA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAAC-------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...................................................................................................................................................................................................................................................................................................................................................CAACAGCAA---CAGCA-----ACAACA---GCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100100
.......................................................................................................................................................................CAA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................................................................................................................................................................................................................A-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAGCAA---------------------------------------------------------------CAGCAAC---.............................................................................................................................................................................................................................................................................................................................................20200.05100010
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAACA---GTT.............................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..............................................................................................................................................................................................................................................................................................................................................AATATCAACAGCAA---CAGCA-----ACAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............................................................................................................................................................................................................................................................................................................................................CAATATCAACAGCAA---CAGCA-----ACAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...........................................................................................................................................................................................................................................................................................................................................AACAATATCAACAGCAA---CAGCA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
............................................................................................................................................................................................................................................................................................................................................ACAATATCAACAGCAA---CAGCA-----ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCAGCA..................................................................................................................25200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---C............................................................................................................................19200.05100010
...........................................................................................................................................................................................................................................................................................................................................AACAATATCAACAGCAA---CAGCA-----ACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---C............................................................................................................................24200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAG.......................................................................................................................20200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCA.....................................................................................................................20200.05100001
................................................................................................................................................................................................................................................................................................................AACAGCAACAAC---AGCAGC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
..........................................................................................................................GCAAC------------------AA----CAACAAC-AGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCA.....................................................................................................................21200.05100010
................................................................................................................................................................................................................................................................................................................................................................AGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAGC...................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................................AACAATATCAACAGCAA---CAGCA-----AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................................................................................................................................................................................................................AATAT------------CAACAGCAACAGCAAC-------AT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGCAGCA.....................................................................................................................24200.05100001
.........................................................................................................................AGCAAC------------------AA----CAACAAC-AGCAGCAGCAA---------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGC.........................................................................................................................26200.05101000
.........................................................................................................................................................................................................................................................................................................................................................CAA---CAGCA-----ACAACA---GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.........................................................AACA------------------------------------GC-------------------AGCAGCAAC------------------AA----C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
..............................................................................................................................................................................................................................................................TAT------------CAACAGCAACAGCAAC-------AACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
................................................................................................................................................................................................................................................................................................................................................TATCAACAGCAA---CAGCA-----ACAACA---................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..........................................................................................................................................................................................................................................................................................................................................CAACAATATCAACAGCAA---CAGCA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.............................................................................................................................................................................................................................................................ATAT------------CAACAGCAACAGCAAC-------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............................................................................................................................................................................................................................................................ATAT------------CAACAGCAACAGCAAC-------AACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.......................................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCA-----ACAACA---GCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................................AACAATATCAACAGCAA---CAGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................................................................................................................................................................................................................................................................................................................ATCAACAGCAA---CAGCA-----ACAACA---................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------------------------------------CAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C-----------------------------------------AG---CAGC.........................................................................................................................24200.05100010
.........................................................................................................................................................................A---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAAC-------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................................AA---------------------------------------------------------------------------------CAATAT------------CAACAGCAACAGCAAC-------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................CAGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................................................23200.05101000
dp5
GA---GGAGCAG---------------CA---AGTCATC-GATG-AGGGGCAACAGCAGCAGCAGCAGCAGCGGCAAC------------------------CACAGC---------A---------------------------------------------GCATCAA-------------------------------------------------------------------------------------------------------------------------------CA---------------------GCAAC-----------------------------------------------------------AACAACAACAACAACAGCTGCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAACAACAGCAACAACATGGCCGTTGATTTGTCTCTCTCGGTGGCAGCGGCAGCGAACTGCAGC-AGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTCAGC----GGCAGCA----G------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCTGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AACAA--------------------------------------------------------------------------------------------------CAACAACAACAGCAACAACAT...........................................................................................................................................................................................................................................................2630.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCTGCAGCAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................1950.2010010000000
..............................................GGGGCAACAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710100000000
.................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAGCTG..............................................................................................................................................................................................................................................................................................................................................................................................19100.1010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAAC.........................................................................................................................................................................................................................................................................20200.1020200000000
................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCTGG.............................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
GA---GGAGCAG---------------TA---AGTCATCTGATGAGGGGGCAACAGCAGCAGCAGCAGCAGCGGCAAC------------------------CACAGC---------A---------------------------------------------GCATCAA------------------------------------------------------C---------------------------------------------------------AGC-------AACAGCAAC------------------AGCAAC-----------------------------------------------------------AACAACAACAACAACAGCTGCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA---CAGCAACAACATGGCCGTTGATTTGTCTCTCTCGGTGGCAGCGGCAGCGAACTGCAGC-AGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTCAGC----GGCAGCA----G------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................CAGC---------A---------------------------------------------GCATCAA------------------------------------------------------C---------------------------------------------------------AGC-------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.071010000
....................................................ACAGCAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA---CAG....................................................................................................................................................................................................................................................................21200.051001000
.........................................................................................................................................................................A------------------------------------------------------C---------------------------------------------------------AGC-------AACAGCAAC------------------AGCAAC-----------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
..................................................................................................................................................................................................................................................................................................................................AAC-----------------------------------------------------------AACAACAACAACAACAGC................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA---CAGC...................................................................................................................................................................................................................................................................22200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------------------------------------------------------------CAACAA---CAGCAACAAC.............................................................................................................................................................................................................................................................18200.051001000
droAna3
ATC-AGTAGCAACAGC---------------A--------GCAGCATC------------------AGCAGC-------------------------------------------------AGCAAC------------------A-----------------------G---------CAGCAGCAGCGGCGGAA---------------------------------------------------------GCAGAAGCGGTAGCATCAAC---------G-------CTACCAACAAC------------------AACATC---A------A------C---AATAACA--------ACAACA---ACAACAACAACAACA---------------------------ACAA-----------------------------------------------------------------------------------------------------C---AATAGCAACA----------------------------------------------------------------------GCCGAAATAGCAGCAGCTCGAAAAGCAGCAGCCACC--------G---C------AG---CAGCCGTCGT----CGCAGCCGAAGTCACA---------GCAAC------------------------------GCCAG-----------CGTTGGCAGCGAC----GCCAGCA----G------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....AGTAGCAACAGC---------------A--------GCAGCATC------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........GCAACAGC---------------A--------GCAGCATC------------------AGCAGC-------------------------------------------------AGCAAC------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.501010000
.........CAACAGC---------------A--------GCAGCATC------------------AGCAGC-------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.222000002
........................................GCAGCATC------------------AGCAGC-------------------------------------------------AGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.152200000
.........................................................................................................................................................................................................................................................................................................................................................................ACAACA---ACAACAACAACAACA---------------------------ACA...................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
.........CAACAGC---------------A--------GCAGCATC------------------AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000011
...........ACAGC---------------A--------GCAGCATC------------------AGCAGC-------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091000001
.............................................ATC------------------AGCAGC-------------------------------------------------AGCAAC------------------A-----------------------G---------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081010000
.......................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA---------------------------ACAA-----------------------------------------------------------------------------------------------------C---AATAGCA..................................................................................................................................................................................................................................................................22140.071100000
.......AGCAACAGC---------------A--------GCAGCATC------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061000001
...................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACA---------------------------ACAA-----------------------------------------------------------------------------------------------------C---AATA.....................................................................................................................................................................................................................................................................23200.051010000
...................................................................GCAGC-------------------------------------------------AGCAAC------------------A-----------------------G---------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
............................................................................................................................................................................................................................................................................................................................................................TAACA--------ACAACA---ACAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
........GCAACAGC---------------A--------GCAGCATC------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
..........................................................................................................................................................................................................................................................................................................................................................AATAACA--------ACAACA---ACAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droBip1
AGC-CAAAGTCGCAGC-----------------------------------------------AGCAACAGTAGCAAC------------------------AACAGC---------A---------------------------------------------GCATCAG------------------------------------------------------CAGCAACAGCAGCAGCGGCGGCAGCAGA------AGCGGTAGC----------------------------------------------------ATCGAC---G------G------C---GG---CAGCA-----ACAACA---ACAACAACAAT---------------------------------------------------------------AATAACAACAACAATAAC------------------------------------------------------------------------------------------------------------------------------AGCCGCA---ACAG---------CAGCAGCTCGAAAAGCAGC---C-----------G------------------CCG----------CAGCCGTCGTCGCAGC-----------------------------------------CGAAGT-----------C----------------CA----A----G------SizeHit CountTotal NormTotal
No Reads
droKik1
AGC-AGCAGCAG-----------------------------ATGCAAATTGCAC------------------------------------------AGCAGCAACAGCAGGCGATAC-A----------------------------------GCA-------GCATCATCAGCACCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAAC------------------ACCAGCAGCAGCAA---------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGCAGCAGCAG------------C------------------AAAA--------G---------------TTGAAGCAGTCGCAGGCGGCAAGTGCGGCGGCC-----AACAAT---------------------------------------------------------------AAGGCCACCAATTTGACASizeHit CountTotal NormTotal
No Reads
droFic1
AGC-AGC---------------------A---AGTTGCC-GCCG-TCGGCCAAC------------------------------------------AGC-------------------AGCAACAGC------------------AACA-CTAGCA----TTAGCAATAT---------CAATATCAATAGCAACA---------------------------------------------------------GC---------------------------AAC-------AGCAACAGC---------AAT---AACAT---CAACA------C------C---AG---CAACA-----GCAATA---GCATCAACAAC---------------------------------------------------------------AACAACAACAATAATAATAATAGTAGCAGCGGCACGACGGCAACTGCAGTTGCAGTTGCAACACCAACAG----------------------------------------------------------------------------------------------------------------CAGCAGCAACA--------G---------------CAGCAGCAGCC------------------------------------------------------------------------------------GCAGCAGC----AGCAGCA----G------SizeHit CountTotal NormTotal
No Reads
droEle1
GAACAACAACTG---------------------TACA-------GCGGCGCAGC---------AGCAGCAATAACAAC-----------------------------------------------------------------------------A----ACAGCAGCAA---C---A---------------G------------------------------CAACAAC-------------------------------------------------------------AACAACAGC---------AGCAAC---AACAAC---A------A------T-----------------------------------------AGCAG------------------------------------------------------CAACAACAACGGCCGCA--------------------------------------------ACACCAACAACA----------------------------------------------------------------------------------GCAA------------C------------------AAAA--------G---------------CG----------------------------CAC-----TTCAAACGCCGCATGTTCGTGTCCGT--GTGCGGCTGCC-TCTGTGTGTGTGTTTGTGTGTTAAT----GA----A----A------SizeHit CountTotal NormTotal
No Reads
droRho1
CCA-ATTCGTCGCACAAGCAGCAGCAGCA------------------C------------------------------------------------TCC-------------------TCCAACAAC------------------AATCGCCAGAA----GTCGCAGTCG--------------------------------------------------------------------------------AGCACTT------------CA-TTG-------AATACCGCCCACGAGCAGC---------AGCAGC---AACAAC---A------G------C---AA--------CAACAACAGCA---GCAGCA------------------------------------ACAG--------------------------------------------------------------------------------------------------CAAC------------GCAACAA------------------------------CACC-----GCAGCT----------------ACAA------------C------------------AAAATTCTACGC---CCACCAGGAG----GCGGCCAGCTAC-------------------------------GAAAGGGG---------------------------------------CGTGGATGTGGGCGATGAGGAGG----C------SizeHit CountTotal NormTotal
No Reads
droBia1
AAC-AGCGGCTGCTGC---AGCAG---CA---ACGCAGC-------AG------------------------------------------------GGC-------------------GGCAGCAAC------------------AACC-TCAGCG----GCAACGCTTG------------------------------------------------------CAACGCC-------------------------------------------------------------AACAGCAGC---------AGCGGC---GGCAGC---A------G------C-----------------------------------------AACAACAACAACAACAACTCGAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA----------------------------------------------------------------------------------------------C------------------AAGA--------GCACCAGCAGTGGGAAATCGTC--------------------CGCGGCC-----AGCAATGGCAGCACTGGAA--------------------------------------ACTCGGGC----GGC-ACA----G------SizeHit CountTotal NormTotal
No Reads
droTak1
GCA-ACA-ACAG-----------------------------------------------CAGCAGCAGCAACAACAACAGCAGATGCAAATGGCACAGCAACAACAGCAGGCGATTC-A----------------------------------GCA-------GCACCATCAGCACCTTCAACA---------G------------------------------CAACACC---------AACAACAGCAGGCG-------------------------------------------------------------C---AGCAAC---A------ACATCAACAGCAG---CAGCA-----ACAACA---GCAGCAGCAA---------------------------------------------------------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGCA---GCAG------------C------------------AAAA--------A---------------CTAAAGCAGTCGCAGGCGGCAAATGCGGCGGCC----------------------------------------------------------------AATAAC----AAGGCCA----C------SizeHit CountTotal NormTotal
No Reads
droEug1
AAC-AACAAGTG-----------------------------TTGCCAGGACAAC------------------------------------------AGCAACATCAGCAGC-------AGCAACAGCAACACTAACACTAGCAACTT----TAGCAGCCAGCAAGGCTAG---------------------CAAAA---------------------------------------------------------CCACAAGCAGCAGCAGC------------AGC-------AGCAGCAGC---------AGC---AACAT---CAACA------G------C---GG---CAACA-----GAAACA---GCAACAACAAC---AACAACCACAAC------------------AACAGCAGCGGCAGCA--------------------------------------------------------------------------ACACTAGCAA-------------------------------------------------------------------------------------------------------------AAGCAGC---AATA--------A---------------CA------------------------------------------------------------------------------------------GAAACAGCAGC----AACACCA----G------SizeHit CountTotal NormTotal
No Reads
dm3
AGC-AGCAATTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCACCAACACCAGATGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAA-------------------------------------------------------------------CAAC------------------AACAAC---A------A------C---AA--------------CAACAACAACAACAACAAC---AACAACAACAACAACAGCAGCAGCAGCAGCAG--------------------------------------------------------------------------------------------------CAGCAA----------------------------------------------------------------------------------------------C------------------A--------------TCAACAGCAG---ATTATCCAGCAACAGGCAACGGCTACTTCTGCCCTATC-----------------------------------TGACAT-----------CCTTGGCTTTGGC----GAGGACA----G------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.....................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAAC---AACAAC............................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................C---AA--------------CAACAACAACAACAACAAC---AACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................AGCAA-------------------------------------------------------------------CAAC------------------AACAAC---A------A------C---AA--------------CAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AACAGCAGCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................C---AACAACAACAACAACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CAGCAGCAGCAGCAA-------------------------------------------------------------------CAAC------------------AAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAC---AACAACAACAACAACAG.................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAAC---AACAAC............................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAAC---AACAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC---AACAACAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCAGCAACAACAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAG--------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................C------------------AACAAC---A------A------C---AA--------------CAACAACAACAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................C---AACAACAACAACAACAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAAC---AACAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAAC---AACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAAC---AACAACAACAACA.....................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------------------------------------------------------------------------------------------CAGCAA----------------------------------------------------------------------------------------------C------------------A--------------TCAACAGCA.................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGCAG--------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCAGCAGCAA-------------------------------------------------------------------CAAC------------------AACAAC---A------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A-------------------------------------------------------------------CAAC------------------AACAAC---A------A------C---AA--------------CAACAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------------------------------------------------------------------------------------------CAGCAA----------------------------------------------------------------------------------------------C------------------A--------------TCAACAGC..................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAG--------------------------------------------------------------------------------------------------CAGCAA----------------------------------------------------------------------------------------------C------------------A--------------..........................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AC---AACAACAACAACAACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................C---A------A------C---AA--------------CAACAACAACAACAACAAC---..................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAAC------------------AACAAC---A------A------C---AA--------------CAACAACA................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AC------------------AACAAC---A------A------C---AA--------------CAACAACAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................C---A------A------C---AA--------------CAACAACAACAACAACAAC---A.................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGCAA-------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAAC------------------AACAAC---A------A------C---AA--------------CAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AAC------------------AACAAC---A------A------C---AA--------------CAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAA-------------------------------------------------------------------CAAC------------------AA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................CAGCAGCAGCAA-------------------------------------------------------------------CAAC------------------AACAAC---A------A------............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGC-AGCAACAG---------------CA---GCGCAGC-------AG------------------------------------------------GGC-------------------GGCAGCAAC------------------AGCC-TCAGCG----GTAGCAGCAA---CGCTT---------------G------------------------------CCACACC-------------------------------------------------------------AACAGCAGC---------AGCAAC---AGCAAT---A------A------T-----------------------------------------AACAATAACAACAACAACTCCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA----------------------------------------------------------------------------------------------C------------------A--------------CTAGTAGTGGGAAAACCTC--------------------AGCGGCC-----AGCAATGGCGGCACAGCAACATCCGGCGGCACAGCGGAC-T-----------CCGTGGTTGCGGTG---GATGACG----A------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................ATAACAACAACAACTCCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACATCCGGCGGCACAGCGGAC-T-----------...................................2611.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCGGCGGCACAGCGGAC-T-----------CC.................................2411.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCAGCAACAA--------------------------------------------------------------------------------------------------CAACA...........................................................................................................................................................................................................................................................................1930.33100000000001000000
.....................................................................................................................................................................................................................................CC-------------------------------------------------------------AACAGCAGC---------AGCAAC---AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAA--------------------------------------------------------------------------------------------------CAACAA----------------------------------------------------------------------------------------------C------------------.........................................................................................................................................................18200.05100000000001000000
droSec2
AAC-AGCAGCAG-----------------------------ATGCAAATTGCAC------------------------------------------AGCAGCAGCAGCAGGCCATTC-A----------------------------------GCA----TCAGCATCATCAGCACCTGCAGCAGCAGCACCAGGC---------------------------------------------------------C------------C---------------AGC-------AACAGCAGC---------AGCAAC---AACACC---A------G------C---AGCAACA--------GCAACA---GCAACAGCAGCAGCA---------------------------GCAA---------------------------------C---A------------------------------------------------------------------------------------------------------------------------------------------------ACAG------------C------------------AAAA--------G---------------TTAAAGCAGTCACAGGCGGCTAGTGCGGCGGCA-----AATAAT---------------------------------------------------------------AAGGCCACCAAC------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................CAGGC---------------------------------------------------------C------------C---------------AGC-------AACAGCAGC---------AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................CACCAGGC---------------------------------------------------------C------------C---------------AGC-------AACAGCAGC---------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.....................................................................................................................................................................ATCATCAGCACCTGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................CC---A------G------C---AGCAACA--------GCAACA---GCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
....................................................AC------------------------------------------AGCAGCAGCAGCAGGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
...........................................................................................................................................................................................................................................................................................GC-------AACAGCAGC---------AGCAAC---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020020
.....................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCA---------------------------GCAA---------------------------------C---A------------------------------------------------------------------------------------------------------------------------------------------------AC..........................................................................................................................................................................................20200.0510010
............................................................................................................................................................................................................................................................................................C-------AACAGCAGC---------AGCAAC---AACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
............................................................................................................................................................................................................................................................................................................................................................................ACA---GCAACAGCAGCAGCA---------------------------GCAA---------------------------------C---A------------------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................24200.0510010
..........................................................................................................................................................................................................................................................................C---------------AGC-------AACAGCAGC---------AGCAAC---AAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010
droYak3
TCG-AAAAGCAGCGAACTCAGAAGCAGCA---GGCCAC-----------------------------------------------------------GC-------------------AGCAGCAAC------------------AAAT-TCAGCA----GCAGCAATTG---------CAGCACCAACAACAGAT---------------------------------------------------------GC---------------------------AAC-------AACAACAAC---------AGC---AGCA-----------------------------------------------------------------GCAACAACAAC------------------AACAGCAGCAGCAACAACAACAGCAGCAGCAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------C------------------A--------------GCAGCAGCAG---ATCATCCAGCAACAGGCAACTGCTACTTCTGCCCTTTC-----------------------------------TGACAT-----------CCTTGGCTTTGGC----GAGGACA----G------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAACTGCTACTTCTGCCCT..........................................................................................2511.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------C------------------A--------------GCAGCAGCAG---ATCATCCA.....................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAAC---A------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------C------------------.........................................................................................................................................................21200.10202000000000
.............................................................................................................................................................................................................................................................................................................................GCA-----------------------------------------------------------------GCAACAACAAC------------------AACAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................27120.08101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AC------------------AACAGCAGCAGCAACAACAACAG.............................................................................................................................................................................................................................................................................................................................................................25130.08101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AC------------------AACAGCAGCAGCAACAACAACAGC............................................................................................................................................................................................................................................................................................................................................................26130.08100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------AACAGCAGCAGCAACAACAACAG.............................................................................................................................................................................................................................................................................................................................................................26130.08101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACAGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................26170.06101000000000
......................................................................................................................................................................................................................................................................................................................AGC---AGCA-----------------------------------------------------------------GCAACAACAAC------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................C------------------AACAGCAGCAGCAACAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
droEre2
TCG-AAAAGCAGCGAACACAGAAGCAGCA---GGCCAC-----------------------------------------------------------GC-------------------AGCAGCAAC------------------AAAT-TCAGCA----GCAGCAATTG---------CAGCACCAACAACAGAT---------------------------------------------------------GC---------------------------AAC-------AACAGCAGC---------AGCAAC---AACAAC---A------G------C---AG---CAGCA-----ACAACA---GCAGCAGCAG---------------------------------------------------------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGCAGCATCAG------------C-----------------------------------------AG---ATCATCCAACAACAGGCAACTGCTACTTCTGCCCTTTC-----------------------------------TGACAT-----------CCTTGGCTTTGGC----GAGGACA----G------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCCTTTC-----------------------------------TGACAT-----------CCTTGGCT...........................2511.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTTTGGC----GAGGACA----.......1911.0010010000
..........................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------CAACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGC................................................................................................................................................................................................2740.2511000000
.........................................................................................................................................................................................................................................................................................................................................................................ACAACA---GCAGCAGCAG---------------------------------------------------------------CAACAACA...............................................................................................................................................................................................................................................................................................................................................24140.0710000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACAGC................................................................................................................................................................................................22190.0510000100
........................................................................................................................................................................................................................................................................................................................CAAC---AACAAC---A------G------C---AG---CAGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
........................................................................................................................................................................................................................................................................................................GCAGC---------AGCAAC---AACAAC---A------G------C---AG---CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000
.........................................................................................................................................................................................................................................................................................................................AAC---AACAAC---A------G------C---AG---CAGCA-----AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000
................................................................................................................................................................................................................................................................................................................................................................AGCA-----ACAACA---GCAGCAGCAG---------------------------------------------------------------CAAC...................................................................................................................................................................................................................................................................................................................................................24200.0510100000
.....................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---------------------------------------------------------------CAACAACAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................24200.0511000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AACA..................................................................................................................................................................................................20200.0510000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAGCAAC------------------------------------------------------------------------------------------------------------------------------AAC...................................................................................................................................................................................................20200.0510000010
.......................................................................................................................................................................................................................................................................................................................GCAAC---AACAAC---A------G------C---AG---CAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000

Generated: 05/17/2015 at 03:29 AM