ID:

dvi_9715

 Coordinate:

scaffold_12958:1414700-1414898 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_11155:4]; exon [dvir_GLEANR_11155:3]; CDS [Dvir\GJ11176-cds]; CDS [Dvir\GJ11176-cds]; intron [Dvir\GJ11176-in]; Antisense to intron [Dvir\GJ11152-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAGTAATGCTGGAACTCAGGAGAGTTGAGCGCAACAGACGGAGAGCGGAGTAAGTTTAGACTGAGCAGTTATACGCTCTACACAAAGCATCCATCAACTAAAGTGAGATTGCAGTGCAAAGATCCCCTGAATCAGTCCTGCCGAAAGGGGACCGCGATGCCAGCTCTTACTAGAACGCTGACGCTAACAGCTAAGAGCAAGCCACACCAGCTAAATGCGAATAAACGCGGGATCACAAAAAACAACAGAGCGACTCAGGAGCTACTCTACCAAACAACACGGGAAGAGATTGCTGATC
**************************************************....((((.....((((........))))..(((...((((((((........))).)).))).)))......((((((...((.((...)).)).))))))(((((..((..(((((((.......((((.......)))))))))))..)).......((.....)).......))))).........)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060654
160x9_ovaries_total
 M047
female body
 SRR060673
9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 M027
male body		 SRR060656
9x160_ovaries_total
 SRR060679
140x9_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060689
160x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060683
160_testes_total
 SRR060657
140_testes_total
 SRR060681
Argx9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060655
9x160_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M061
embryo
 GSM1528803
follicle cells		 V116
male body		 SRR060678
9x140_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR1106713
embryo_0-2h
 SRR1106714
embryo_2-4h
 SRR1106717
embryo_6-8h
 SRR1106718
embryo_6-8h
 SRR1106720
embryo_8-10h
 SRR1106721
embryo_10-12h
 SRR1106723
embryo_12-14h
 SRR1106724
embryo_12-14h
 SRR1106726
embryo_14-16h
 SRR1106730
embryo_16-30h
 V047
embryo
.........CTGGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 0 20 58.70 1174 553 242 72 52 38 43 22 13 34 0 0 0 9 15 10 10 8 13 7 13 5 0 5 2 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 0 20 37.75 755 359 141 43 54 35 35 21 4 18 0 0 3 0 0 7 7 2 0 4 0 5 0 2 3 3 3 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1
.........CTGGAACTCAGGAGAGTTGAG............................................................................................................................................................................................................................................................................. 21 0 20 6.15 123 0 22 36 15 9 0 9 4 0 0 0 0 8 0 0 0 8 4 0 0 4 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCG........................................................................................................................................................................................................................................................................... 23 0 20 4.90 98 28 11 0 10 11 7 10 1 0 6 0 3 0 2 2 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCAA........................................................................................................................................................................................................................................................................ 26 0 20 3.20 64 3 0 19 0 14 10 0 1 0 7 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCA......................................................................................................................................................................................................................................................................... 25 0 20 2.50 50 0 0 11 4 0 5 10 1 4 6 0 0 0 1 1 0 1 0 1 0 0 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCAAC....................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCCAC....................................................................................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AACAGACGGAGAGCGGAG........................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AACAGACGGAGAGTGGAGTAAGT................................................................................................................................................................................................................................................... 23 1 2 1.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GCGCAACAGACGGAGAGCGGAGT....................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GACGTTAACAGCTAAGGGGAA.................................................................................................. 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGA.............................................................................................................................................................................................................................................................................. 20 0 20 0.85 17 0 1 7 0 0 4 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTT................................................................................................................................................................................................................................................................................ 18 0 20 0.75 15 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....TAATGCTGGAACTCAGGAGAGTTGAG............................................................................................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGTAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.45 9 8 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTG............................................................................................................................................................................................................................................................................... 19 0 20 0.40 8 0 1 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 18 0 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 23 0 20 0.35 7 0 3 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGTAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 21 0 20 0.30 6 4 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAACGCATC....................................................................................................................................................................................................................................................................... 27 2 8 0.25 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGA.......................................................................................................................................................................................................................................................................... 24 1 20 0.25 5 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGCCAGGTCGTACTATAAC.......................................................................................................................... 19 3 13 0.23 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCC......................................................................................................................................................................................................................................................................... 25 1 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0
.........CTGGAACTCAGGAGAGTTGAGCGCTA........................................................................................................................................................................................................................................................................ 26 1 20 0.20 4 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGCTGGAACTCAGGAGAGTTG............................................................................................................................................................................................................................................................................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTCAGGAGAGTTGAG............................................................................................................................................................................................................................................................................. 24 0 20 0.20 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGAGTTGAGCG........................................................................................................................................................................................................................................................................... 22 0 20 0.20 4 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 20 0 20 0.20 4 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TAACAGCTAAGGGGAAGC................................................................................................ 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GGGGGACCACAAAAAACAA..................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGGGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.15 3 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGATC............................................................................................................................................................................................................................................................................ 22 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCT......................................................................................................................................................................................................................................................................... 25 1 20 0.15 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............GAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 19 0 20 0.15 3 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GCTGGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 23 0 20 0.15 3 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCAT........................................................................................................................................................................................................................................................................ 26 1 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGCTGGAACTCAGGAGAGTTGAG............................................................................................................................................................................................................................................................................. 23 0 20 0.15 3 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGCTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.15 3 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCCA........................................................................................................................................................................................................................................................................ 26 1 20 0.15 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGAGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.15 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAAGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.15 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGTGCAAC....................................................................................................................................................................................................................................................................... 27 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTAAGGAGAGTTGAGCGCAAC....................................................................................................................................................................................................................................................................... 27 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GCGTAATAGACGGAGAGCGGAGT....................................................................................................................................................................................................................................................... 23 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GCGCAATAGACGGAGAGCGGAGT....................................................................................................................................................................................................................................................... 23 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAACGCAAC....................................................................................................................................................................................................................................................................... 27 1 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTGCCGGAAGGGGATCGCT.............................................................................................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGGGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCTG.......................................................................................................................................................................................................................................................................... 24 2 20 0.10 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATGGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGGGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAT............................................................................................................................................................................................................................................................................. 21 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTTAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........CTGGAACTCGGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GCTGGAACTCAGGAGAGTTGAG............................................................................................................................................................................................................................................................................. 22 0 20 0.10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTTGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGATG............................................................................................................................................................................................................................................................................ 22 2 20 0.10 2 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGACTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.10 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAC............................................................................................................................................................................................................................................................................. 21 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGCGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGGACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAATTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............ACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 19 0 20 0.10 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTCAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGGGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCT........................................................................................................................................................................................................................................................................... 23 1 20 0.10 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAACGATGACGTTAACAGCT.......................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TAAGATTGCAGTGCACAGGT............................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGTGCACC....................................................................................................................................................................................................................................................................... 27 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGCAAAGACCCCCTGTATA..................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGTAGGGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGCTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGCTGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GCTGGAACTCAGGAGAGTTGCGC............................................................................................................................................................................................................................................................................ 23 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGAT......................................................................................................................................................................................................................................................................... 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TATGCTGGAACTCAGGAGAGTTT............................................................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGAAACTCAGGAGAGATGAGC............................................................................................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACCCAGGAGAGTTGAGCG........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTGGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGAGTTGAGCGCA......................................................................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATGGAACTCAGGAGAGTTGAGCGCC......................................................................................................................................................................................................................................................................... 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........CTGGAACTCAGTAGAGTTGAGCGCA......................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTCAGGAGAGTTGA.............................................................................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GCTGGAACTCAGGAGAGTT................................................................................................................................................................................................................................................................................ 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAATTGAGCGCAA........................................................................................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGGTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GGAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGTTC............................................................................................................................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACCCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGATGAGCG........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTTAG............................................................................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGACCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCTGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGCTGAGCG........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGGGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGCGCG........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AAAGATCCACTGGATGAGT.................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGCGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGGT........................................................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTTAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGAGATGAGC............................................................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCC........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GCTGGAACTCAGGAGAGTTGAGG............................................................................................................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGCGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTAAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CCGGAACTCAGGAGAGTTGAG............................................................................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGTGAGTT................................................................................................................................................................................................................................................................................ 18 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGAGTTGAGCGCAA........................................................................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTA............................................................................................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGCTGGAACTCAGGAGAGTTGAGCGCTA........................................................................................................................................................................................................................................................................ 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGCAG........................................................................................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............ACTCAGGAGAGTTGAGCGCAA........................................................................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTCAGGCGAGTT................................................................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGCAACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGTAGAGTTGAG............................................................................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGATA.......................................................................................................................................................................................................................................................................... 24 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGAACTCAGGAGGGTTGAGCGC.......................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGGGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGAAT........................................................................................................................................................................................................................................................................ 26 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCTAAA........................................................................................................................................................................................................................................................................ 26 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGTACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGCGTTGAGCG........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACCCAGTAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CCGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGT................................................................................................................................................................................................................................................................................. 17 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........CTGGCACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTTGAACTCAGGAGAGTT................................................................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTTAGGAGAGTTGAGCGCAA........................................................................................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGTGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGAC........................................................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTCAGGAGAGTC................................................................................................................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTTAGGAGAGTT................................................................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGTGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CGGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTTAGCG........................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGA............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GCTGGAACTCAGGAGAGTTT............................................................................................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACCCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTCAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGCTGGAACTCAGGAGAGTTGA.............................................................................................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGCTGGAACTCAGGAGAGTT................................................................................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGTAGAGTTG............................................................................................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGACTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAACTCAGGAGAGTTGAGCGGA......................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAAATCAGGAGAGTTGATC............................................................................................................................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGAATTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTGGAACTCAGGAGAGTTGAGCGC.......................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGGGACTCAGGAGAGTTGAGC............................................................................................................................................................................................................................................................................ 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTCATTACGACCTTGAGTCCTCTCAACTCGCGTTGTCTGCCTCTCGCCTCATTCAAATCTGACTCGTCAATATGCGAGATGTGTTTCGTAGGTAGTTGATTTCACTCTAACGTCACGTTTCTAGGGGACTTAGTCAGGACGGCTTTCCCCTGGCGCTACGGTCGAGAATGATCTTGCGACTGCGATTGTCGATTCTCGTTCGGTGTGGTCGATTTACGCTTATTTGCGCCCTAGTGTTTTTTGTTGTCTCGCTGAGTCCTCGATGAGATGGTTTGTTGTGCCCTTCTCTAACGACTAG
**************************************************....((((.....((((........))))..(((...((((((((........))).)).))).)))......((((((...((.((...)).)).))))))(((((..((..(((((((.......((((.......)))))))))))..)).......((.....)).......))))).........)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M047
female body
 SRR060675
140x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR1106728
larvae
 SRR060661
160x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060659
Argentina_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 V053
head
 GSM1528803
follicle cells		 SRR060677
Argx9_ovaries_total
 SRR1106727
larvae
 SRR1106729
mixed whole adult body
 SRR060667
160_females_carcasses_total
 SRR060657
140_testes_total
 SRR060654
160x9_ovaries_total
 SRR060670
9_testes_total
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
.............TTGAGTCCTCTCAACTCGCGTTGTCT.................................................................................................................................................................................................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGTCC....................................................................................... 18 2 3 1.33 4 0 0 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TGAGTCCTCTCTACTCGCGTTGTCT.................................................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TCTGCCTCTCGCCTCATTCAAAT................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GAGTCCTCTCAACTCGCGTTGTCT.................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTGCGTCCTCTCAACTCGCGTTGTCT.................................................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AGTCCTCTCAACTCGCGTTGTCTGCCT................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AATTTGAGTCCTCTCAACTCGCGTTGTCT.................................................................................................................................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TGAGTCCTCTCGACTCGCGTTGTCT.................................................................................................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TGGTCCCGCTGAGTCCTCGC................................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCTCTCAACTCGCGTTGTCTGCCTCT.............................................................................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCTCTCAACTCGCGTTGTCTGCCT................................................................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AGTCTCGTTCGGGGTGGTC........................................................................................ 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CTCTCAACTCGCGTTGTCTGCCTCT.............................................................................................................................................................................................................................................................. 25 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGTCCA...................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CTCGTTCGGGGTGGT......................................................................................... 15 1 11 0.45 5 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGTTG....................................................................................... 18 2 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ACGACCTTGAGTCCTCTCAACTCGCGT......................................................................................................................................................................................................................................................................... 27 0 20 0.35 7 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................GGTCCCGCTGAGTCCTCG.................................... 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGTCCGTT.................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTCTCGTTCGGGGTGGTC........................................................................................ 18 2 12 0.25 3 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTCTCGTTCGGTGTGGTCCGT..................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GACCTTGAGTCCTCTCAACTCGCGT......................................................................................................................................................................................................................................................................... 25 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 0
....................CTCTCAACTCGCGTCGTCTGCCTCTCCCG.......................................................................................................................................................................................................................................................... 29 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGT......................................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGTCCGT..................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGGGTGGTCCG...................................................................................... 19 3 20 0.15 3 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTCTCGTTCGGGGTGGTCG....................................................................................... 19 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCTCGTTCGGTGTGGTTC....................................................................................... 18 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TGTTCACTCTCTGAGTCCTC..................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................TGTCTGCCTCTCGCCTCCTCCAAAT................................................................................................................................................................................................................................................ 25 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ATGTGCTTCGTAGATAGTG......................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................TCGTCAATAGGCGAGGCGT........................................................................................................................................................................................................................ 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........GACCTTGAGTCCTCTCAACTCGC........................................................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GACATTGAGTCCTCTCAACTCGCGT......................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......ACGACCTGGAGTCCTCTCAACTCGCGT......................................................................................................................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTCTTCCGGCGCTACGGTC....................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GACCTTGAGTCCTCTCAACTCGCGTT........................................................................................................................................................................................................................................................................ 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............TGAGTCCTCTCAACTCGC........................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ACCTTGAGTCCTCTCAACTCGCGTT........................................................................................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GACCTTGCGTCCTCTCAACTCGCGT......................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........CGACCTTGAGTCCTCTCAACTCGCGTT........................................................................................................................................................................................................................................................................ 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GGCCTTCCCCTGGGACTA............................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AGTCCTCTCAACTCGCGTTGTCTACCT................................................................................................................................................................................................................................................................ 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......ACGACCTTGAGTCCTCTCAACTCGCG.......................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................AATATGCTTGATGTGTTT.................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........ACCTTGAGTCCTCTCAACTCGC........................................................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ACGACCTAGAGTCCTCTCAACTCGCG.......................................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12958:1414650-1414948 + dvi_9715 GAAGTAATGCTGGAACTCAGGAGAGTTGAGCGCAACAGACGGAGAGCGGAGTAAGTTTAGACTGAGCAGTTATACGCTCTACACAAAGCATCCA----TCAACTAAAGTGAGATTGC-------AGTGCAAAGATCCCCTGAATCAGTCCTGCCGAAAGGGGACCGCGATGCCAGCTCTT----------ACTAGAACGCTGACGC-----TAACAGCTAAGAGCAAGCCACACCAG-----------------------CTAAATGCGAATAAACGCGGGATCACAAAAAACAACAGAGCGACTCAGGAGCTACTCTACCAAACAACACGGGAAGAGATTGCTG----------------------------------------------------------ATC
droMoj3 scaffold_6490:3648-3769 - ACAGTAATGATGGAGCTCCGCAGAGTTGAGCG----------------------------------------------------------------------------------------------------------------------AATAAGAAGAGC--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCAGGCTAAGGTAGCGCAAAAAACAAGTATGAAAGCTATAGTCGAGATTGCTCGACTACGAGATCCCCTGAACC
droWil2 scf2_1100000001990:10101-10222 - TGCCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATT----------TGTAG-AGGCTGACAG-----TAACAGGCAGGATTAAGTTTCTACAG-----------------------CTCAAT------------------CTAAACCACTGCAGGTCGGCACAGGACCTCTTAAAACAAACTGTACGGGACCTGAAAGCAG----------------------------------------------------------ATC
dp5 Unknown_group_235:5367-5431 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACCACTGCCGAGCTGCTCAGGATATGTTGGCGCAAACAGTCCTGGAGCAGAAGATCG----------------------------------------------------------ACA
droPer2 scaffold_1:9315672-9315733 + AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGCCGAGCTGCTCAGGATCTGTTGGCGCAAACAGTCCTGGAGCAGAAGATTG----------------------------------------------------------ACA
droAna3 scaffold_3878:1684-1740 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGAAGTAGCTCATAGCCTACTCGAGCAGACCTTAAGGGAGAAGAGGGCAG----------------------------------------------------------ATA
droBip1 scf7180000396753:5699-5759 - GCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGC--AGAGGCTCAGGAGCATCGAGCAGGAGAGGCGGTAGGGTGGTGAGTTGG---------------------------------------------------------GGC
droKik1 scf7180000298988:1297-1360 + AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGCAGAGCAGCCCAAGACTTACTGTCGCAGACGGCGATCGAGCAGAGAATCGT-------------C-------------------------------------------ATC
droFic1 scf7180000453575:7334-7459 - CCATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------AAAAAGGCGCTGACCCAAATCCGACAACGATGATCCGCATCTACCAG-----------------------CTGAAC------------------ATGAATCATTGTGAAGCTGCGCAAGACCTGCTAGCACAGAGTCTCCGGGAGAACAAGTCTG----------------------------------------------------------ACA
droEle1 scf7180000489728:4429-4680 - ACAAGGC----------------------------------------------------------------------------------ATACGCAGGACAGCCAATGGGAGCCTGCTACTCAAGATGCAGAAACCCTCAGACCCAGCCACGCAGCGGGCGC--T------------GCACCTAGGATGCGAAAGGCCTATGGCGGAACCCAAACGGCGACGGTTCACCTCAGACAAGAGCATGCACAGCGGATCCTCGCCAAGGGGAAAATCAGGGTAGGAACCTAAGCCACTGCAGAGCGGCGCAGGACCTACTAACCCAGACGGCAATCGAACAACAGGCTG----------------------------------------------------------ATG
droRho1 scf7180000770912:5678-5734 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGGGTGGCCCAGGACCTTCTCACCCAAACAATTTCCGAGCTCAAAATAG----------------------------------------------------------ACC
droTak1 scf7180000415864:17750-17806 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGAGCAGCGCAGGACCTGCTCGCGCAAACAGTCCTGGAAAAGAACATAG----------------------------------------------------------ATG
droEug1 scf7180000409005:628797-628853 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTAGAGCGGCGCAGGATCTCCTGCGACACACGGTAGGCGAGGTGAATGCTG----------------------------------------------------------ACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GAAGTAATGCTGGAACTCAGGAGAGTTGAGCGCAACAGACGGAGAGCGGAGTAAGTTTAGACTGAGCAGTTATACGCTCTACACAAAGCATCCA----TCAACTAAAGTGAGATTGC-------AGTGCAAAGATCCCCTGAATCAGTCCTGCCGAAAGGGGACCGCGATGCCAGCTCTT----------ACTAGAACGCTGACGC-----TAACAGCTAAGAGCAAGCCACACCAG-----------------------CTAAATGCGAATAAACGCGGGATCACAAAAAACAACAGAGCGACTCAGGAGCTACTCTACCAAACAACACGGGAAGAGATTGCTG----------------------------------------------------------ATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........CTGGAACTCAGGAGAGTTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................222058.7011740022243591355313242001000000000013038107201505275240234800000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................242037.757553021135200359014100700000000040357431005345430318200000000000100100001010
.........CTGGAACTCAGGAGAGTTGAG........................................................................................................................................................................................................................................................................................................................................................................................21206.15123009000800422000000000100439036000400150000800000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCG......................................................................................................................................................................................................................................................................................................................................................................................23204.909830100710028011102000000000141100020010100600000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGCAA...................................................................................................................................................................................................................................................................................................................................................................................26203.2064000010000300100000000000101441900011000700000000000000000000000003
.........CTGGAACTCAGGAGAGTTGAGCGCA....................................................................................................................................................................................................................................................................................................................................................................................25202.505000100500000000100000000012001101000142604100000000000000000000001
.........CTGGAACTCAGGAGAGTTGAGCGCAAC..................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.................................AACAGACGGAGAGCGGAG...................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000001000000000000000000000000000000000000000
.............................GCGCAACAGACGGAGAGCGGAGT..................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000100000000000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................20200.8517000040010010000000000000000700001000003000000000000000000000000
.........CTGGAACTCAGGAGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................18200.7515000000009050000000000000000000000000000000100000000000000000000
....TAATGCTGGAACTCAGGAGAGTTGAG........................................................................................................................................................................................................................................................................................................................................................................................2620.501000000000010000000000000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTG..........................................................................................................................................................................................................................................................................................................................................................................................19200.408000000120010000000000004000000000000000000000000000000000000000
.............AACTCAGGAGAGTTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................18200.408000000008000000000000000000000000000000000000000000000000000000
..........TGGAACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................23200.357001000000130000000000000000101000000000000000000000000000000000
..........TGGAACTCAGGAGAGTTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................21200.306000010004000000000000000000000000000001000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGA.....................................................................................................................................................................................................................................................................................................................................................................................24200.255000010001000000000000000110000000000001000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGCC....................................................................................................................................................................................................................................................................................................................................................................................25200.204200000000000000000000000000000000000000000000000010000000010000
.......TGCTGGAACTCAGGAGAGTTG..........................................................................................................................................................................................................................................................................................................................................................................................21200.204000000004000000000000000000000000000000000000000000000000000000
......ATGCTGGAACTCAGGAGAGTTGAG........................................................................................................................................................................................................................................................................................................................................................................................24200.204000000003010000000000000000000000000000000000000000000000000000
..........TGGAACTCAGGAGAGTTGAGCG......................................................................................................................................................................................................................................................................................................................................................................................22200.204003001000000000000000000000000000000000000000000000000000000000
.............AACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................20200.204000000003000000000000000000000000000100000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGCT....................................................................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000000000000020000000000000000010000000000
............GAACTCAGGAGAGTTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................19200.153000000100020000000000000000000000000000000000000000000000000000
........GCTGGAACTCAGGAGAGTTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................23200.153000000101000000000000000000100000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGCAT...................................................................................................................................................................................................................................................................................................................................................................................26200.153000000000000000000000000000300000000000000000000000000000000000
.......TGCTGGAACTCAGGAGAGTTGAG........................................................................................................................................................................................................................................................................................................................................................................................23200.153000000000020000000000000000000000000001000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCTG.....................................................................................................................................................................................................................................................................................................................................................................................24200.102000000001000000000000000010000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAT........................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000200000000000000000000000000000000000
........GCTGGAACTCAGGAGAGTTGAG........................................................................................................................................................................................................................................................................................................................................................................................22200.102000000001000010000000000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGATG.......................................................................................................................................................................................................................................................................................................................................................................................22200.102000010000000000000000001000000000000000000000000000000000000000
...............CTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................18200.102000000100000000000000000000010000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAC........................................................................................................................................................................................................................................................................................................................................................................................21200.102000000200000000000000000000000000000000000000000000000000000000
..............ACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000010000000001000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCT......................................................................................................................................................................................................................................................................................................................................................................................23200.102000000001000000000000000000000000000100000000000000000000000000
.......TGCTGGAACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGAT....................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
..........TGGAACTCAGGAGAGTTGAGCGCA....................................................................................................................................................................................................................................................................................................................................................................................24200.051000000001000000000000000000000000000000000000000000000000000000
......ATGCTGGAACTCAGGAGAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
........GCTGGAACTCAGGAGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000010000000000000000000000000000000000000000000000000000
............GAACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................21200.051000000001000000000000000000000000000000000000000000000000000000
...........GGAACTCAGGAGAGTTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGGT......................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000100000000000000000000000
......ATGCTGGAACTCAGGAGAGTTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000100000000000000000000000000000000000000000000000000000
........GCTGGAACTCAGGAGAGTTGAGG.......................................................................................................................................................................................................................................................................................................................................................................................23200.051000000001000000000000000000000000000000000000000000000000000000
..........TGGAACTCAGGAGAGTTGAGCGCAA...................................................................................................................................................................................................................................................................................................................................................................................25200.051000000001000000000000000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTA..........................................................................................................................................................................................................................................................................................................................................................................................19200.051000000001000000000000000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGCGCAG...................................................................................................................................................................................................................................................................................................................................................................................26200.051000010000000000000000000000000000000000000000000000000000000000
..............ACTCAGGAGAGTTGAGCGCAA...................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGATA.....................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
.........CTGGAACTCAGGAGAGT............................................................................................................................................................................................................................................................................................................................................................................................17200.051000000000000000000000000000000000000000000000010000000000000000
.........CTGGAACTCAGGAGAGTTGAGAC......................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000010000000000000000000000000000000000000000000000000000
......ATGCTGGAACTCAGGAGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................21200.051000000001000000000000000000000000000000000000000000000000000000
.........CTGGAACTCAGGAGAGTTGAGA.......................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000010000000000000000000000000000000000000000000000000000
........GCTGGAACTCAGGAGAGTTT..........................................................................................................................................................................................................................................................................................................................................................................................20200.051000001000000000000000000000000000000000000000000000000000000000
.......TGCTGGAACTCAGGAGAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000100000000000000000000000000000
......ATGCTGGAACTCAGGAGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................21200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
ACAGTAATGATGGAGCTCCGCAGAGTTGAGCG----------------------------------------------------------------------------------------------------------------------AATAAGAAGAGC--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCAGGCTAAGGTAGCGCAAAAAACAAGTATGAAAGCTATAGTCGAGATTGCTCGACTACGAGATCCCCTGAACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................ATAGTCGAGATTGCTCGACTACGAGATC.........2840.251100000
........................................................................................................................................................................................................................................................................................................................................................................................AGATTGCTCGACTACGAGATCCCCTG....26190.051000010
......................................................................................................................................................................................................................................................................................................................................................................................CGAGATTGCTCGACTACGAGATCCC.......25200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................TCGAGATTGCTCGACTACGAGATCC........25200.051100000
droWil2
TGCCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATT----------TGTAG-AGGCTGACAG-----TAACAGGCAGGATTAAGTTTCTACAG-----------------------CTCAAT------------------CTAAACCACTGCAGGTCGGCACAGGACCTCTTAAAACAAACTGTACGGGACCTGAAAGCAG----------------------------------------------------------ATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGACC......................................................................24150.53807010
.....................................................................................................................................................................................................................................................................................................................ACCTCTTAAAACAAACTGTACGGG.........................................................................24150.27404000
.....................................................................................................................................................................................................................................................................................................................ACCTCTTAAAACAAACTGTACGG..........................................................................23160.25404000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGACCTGA...................................................................27140.21303000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGACCTG....................................................................26140.21303000
...............................................................................................................................................................................................................................................................................................................................ACAAACTGTACGGGACCTGAAAG................................................................23150.20302010
.....................................................................................................................................................................................................................................................................................................................ACCTCTTAAAACAAACTGTACGGGACC......................................................................27150.20303000
...............................................................................................................................................................................................................................................................................................AACCACTGCAGGTCGGCACAG..................................................................................................21200.10200020
........................................................................................................................................................................................................................................................................AT------------------CTAAACCACTGCAGGTCGGCA.....................................................................................................23200.10200020
.................................................................................................................................................................................................................................................................................................CCACTGCAGGTCGGCACAGG.................................................................................................20200.10202000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGACCTGAA..................................................................28140.07101000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGACCTGAAA.................................................................29140.07101000
....................................................................................................................................................................................................................................................................................................................GACCTCTTAAAACAAACTGTACGGG.........................................................................25150.07101000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGG.........................................................................21150.07101000
...........................................................................................................................................................................................................................................................................................................................TAAAACAAACTGTACGGGACCTGA...................................................................24150.07101000
..........................................................................................................................................................................................................................................................................................................................TTAAAACAAACTGTACGGGACCTGA...................................................................25150.07101000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGACCT.....................................................................25150.07101000
..........................................................................................................................................................................................................................................................................................................................TTAAAACAAACTGTACGGGACCTGAA..................................................................26150.07101000
...................................................................................................................................................................................................................................................................................................................GGACCTCTTAAAACAAACTGTACGGG.........................................................................26150.07101000
.................................................................................................................................................................................................................................................................................................................................AAACTGTACGGGACCTGAAA.................................................................20150.07101000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGA........................................................................22150.07101000
.........................................................................................................................................................................................................................................................................................................................CTTAAAACAAACTGTACGGGACC......................................................................23150.07101000
...........................................................................................................................................................................................................................................................................................................................TAAAACAAACTGTACGGGACCTGAAAG................................................................27150.07100010
.....................................................................................................................................................................................................................................................................................................................ACCTCTTAAAACAAACTGTACGGGA........................................................................25150.07101000
........................................................................................................................................................................................................................................................................................................................TCTTAAAACAAACTGTACGGGAC.......................................................................23150.07101000
......................................................................................................................................................................................................................................................................................................................CCTCTTAAAACAAACTGTACGG..........................................................................22160.06101000
.........................................................................................................................................................................................................................................................................T------------------CTAAACCACTGCAGGTCGGCACAGGA................................................................................................27200.05101000
.........................................................................................................................................................................................................................................................................T------------------CTAAACCACTGCAGGTCGGC......................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................................................TCGGCACAGGACCTCTTAAAACAAACC................................................................................27200.05101000
.....................................................................................................................................................................................................................................................................................................TGCAGGTCGGCACAGGACC..............................................................................................19200.05101000
...............................................................................................................................................................................................................................................................................................AACCACTGCAGGTCGGCACAGG.................................................................................................22200.05100001
.........................................................................................................................................................................................................................................................................T------------------CTAAACCACTGCAGGTCGGCACAGG.................................................................................................26200.05101000
........................................................................................................................................................................................................................................................................AT------------------CTAAACCACTGCAGGTCGGCACAG..................................................................................................26200.05100010
dp5
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACCACTGCCGAGCTGCTCAGGATATGTTGGCGCAAACAGTCCTGGAGCAGAAGATCG----------------------------------------------------------ACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................TAAACCACTGCCGAGCTGCTCAGGA................................................................................................2527.501501400100000
.............................................................................................................................................................................................................................................................................................TAAACCACTGCCGAGCTGCTCAGG.................................................................................................2421.5030300000000
..............................................................................................................................................................................................................................................................................................AAACCACTGCCGAGCTGCTCAGGA................................................................................................2420.5010100000000
.............................................................................................................................................................................................................................................................................................TAAACCACTGCCGAGCTGC......................................................................................................1920.5010100000000
.............................................................................................................................................................................................................................................................................................TAAACCACTGCCGAGCTGCTCAGGAT...............................................................................................2620.5010100000000
.............................................................................................................................................................................................................................................................................................TAAACCACTGCCGAGCTGCTCAGGAA...............................................................................................2620.5010010000000
....................................................................................................................................................................................................................................................................................................CTGCCGAGCTGCTCAGGA................................................................................................1820.5010100000000
................................................................................................................................................................................................................................................................................................ACCACTGCCGAGCTGCTCAGG.................................................................................................2120.5010000100000
.............................................................................................................................................................................................................................................................................................TAAACCACTGCCGAGCTGCTC....................................................................................................2120.5010100000000
........................................................................................................................................................................................................................................................................................................................TGTTGGCGCAAACAGTCCTGGA........................................................................2240.2510100000000
........................................................................................................................................................................................................................................................................................................................TGTTGGCGCAAACAGTCCTGGAGC......................................................................2440.2510100000000
...........................................................................................................................................................................................................................................................................................................................TGGCGCAAACAGTCCTGGAGC......................................................................2140.2510100000000
...........................................................................................................................................................................................................................................................................................................................TGGCGCAAACAGTCCTGGAGCAGAAGAT...............................................................2840.2510100000000
droPer2
AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGCCGAGCTGCTCAGGATCTGTTGGCGCAAACAGTCCTGGAGCAGAAGATTG----------------------------------------------------------ACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................TCTGTTGGCGCAAACAGTCCTGGAG.......................................................................2550.402011000
.....................................................................................................................................................................................................................................................................................................TGCCGAGCTGCTCAGGATA..............................................................................................1940.251010000
.AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGCCGAGCTGCTCA...................................................................................................2040.251010000
.....................................................................................................................................................................................................................................................................................................TGCCGAGCTGCTCAGGATCTGTT..........................................................................................2340.251100000
..........................................................................................................................................................................................................................................................................................................................TTGGCGCAAACAGTCCTGGAG.......................................................................2150.201010000
.......................................................................................................................................................................................................................................................................................................................CTGTTGGCGCAAACAGTCCT...........................................................................2050.201010000
.............................................................................................................................................................................................................................................................................................................TGCTCAGGATCTGTTGGCGCAAACA................................................................................2560.171010000
.............................................................................................................................................................................................................................................................................................................TGCTCAGGATCTGTTGGCGCAAACAGTC.............................................................................2860.171010000
droAna3
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGAAGTAGCTCATAGCCTACTCGAGCAGACCTTAAGGGAGAAGAGGGCAG----------------------------------------------------------ATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGC--AGAGGCTCAGGAGCATCGAGCAGGAGAGGCGGTAGGGTGGTGAGTTGG---------------------------------------------------------GGCSizeHit CountTotal NormTotal
No Reads
droKik1
AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGCAGAGCAGCCCAAGACTTACTGTCGCAGACGGCGATCGAGCAGAGAATCGT-------------C-------------------------------------------ATCSizeHit CountTotal NormTotal
No Reads
droFic1
CCATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------AAAAAGGCGCTGACCCAAATCCGACAACGATGATCCGCATCTACCAG-----------------------CTGAAC------------------ATGAATCATTGTGAAGCTGCGCAAGACCTGCTAGCACAGAGTCTCCGGGAGAACAAGTCTG----------------------------------------------------------ACASizeHit CountTotal NormTotal
No Reads
droEle1
ACAAGGC----------------------------------------------------------------------------------ATACGCAGGACAGCCAATGGGAGCCTGCTACTCAAGATGCAGAAACCCTCAGACCCAGCCACGCAGCGGGCGC--T------------GCACCTAGGATGCGAAAGGCCTATGGCGGAACCCAAACGGCGACGGTTCACCTCAGACAAGAGCATGCACAGCGGATCCTCGCCAAGGGGAAAATCAGGGTAGGAACCTAAGCCACTGCAGAGCGGCGCAGGACCTACTAACCCAGACGGCAATCGAACAACAGGCTG----------------------------------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droRho1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGGGTGGCCCAGGACCTTCTCACCCAAACAATTTCCGAGCTCAAAATAG----------------------------------------------------------ACCSizeHit CountTotal NormTotal
No Reads
droTak1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGAGCAGCGCAGGACCTGCTCGCGCAAACAGTCCTGGAAAAGAACATAG----------------------------------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droEug1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTAGAGCGGCGCAGGATCTCCTGCGACACACGGTAGGCGAGGTGAATGCTG----------------------------------------------------------ACASizeHit CountTotal NormTotal
No Reads

Generated: 05/16/2015 at 10:14 PM