ID:

dvi_9705

 Coordinate:

scaffold_12958:1197399-1197549 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -3.3 -3.2

Flybase annnotation

exon [dvir_GLEANR_11097:10]; CDS [Dvir\GJ11152-cds]; intron [Dvir\GJ11152-in]

Repeatable elements

NameClassFamilyStrand
TV1ILTRGypsy-
(TA)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12280:335-362 +
  2. dvi_9705  scaffold_12958:1197460-1197487 -
  3. scaffold_13050:577062-577089 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAAGATTGGCAGACAGCGAGTCCCATGCATATTTCATATAATTGCAGCAGGTATAATAGAAAATTAATATTATTTCTTATGCAATACATATATATATATATATATAGTGACATATCCATAGTCTCACCCACCCTTTAACATAACTTAGCACATAAGCATAAGCACAAGTATAAACATTTCTAATATTGTAAACAAAGAGCATGGTGATAAGATCGACATTGGTCAAGTTCAAACTGTCCCCCTTTGGTAGA
****************************************************************************************************************...............................((((((......)).)))).......................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060662
9x160_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060658
140_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060670
9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 M061
embryo
 SRR060675
140x9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060656
9x160_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 SRR060679
140x9_testes_total
 V116
male body		 M027
male body		 SRR060681
Argx9_testes_total
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGT....................... 26 0 1 36.00 36 0 10 5 8 4 3 3 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAG........................ 25 0 1 10.00 10 0 1 2 1 2 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTGATAAGA....................................... 26 0 1 9.00 9 4 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GATAAGATCGACATTGGTCAAGT....................... 23 0 1 6.00 6 0 1 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGTT...................... 27 0 1 5.00 5 0 0 2 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CATGGTGATAAGATCGACATTGGTCAAG........................ 28 0 1 5.00 5 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGTTC..................... 28 0 1 4.00 4 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAA......................... 24 0 1 3.00 3 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACATTTCTAATATTGTAAACAAAGAGCA.................................................. 28 0 1 3.00 3 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TATCCATAGTCTCACCCACCCTTTAACA............................................................................................................... 28 0 3 2.33 7 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTGATAAGATC..................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTGATAAGAT...................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGGTGATAAGATCGACATTGGTCAAG........................ 26 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AATATTGTAAACAAAGAGCATGGTGA............................................ 26 0 2 1.50 3 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CATAGTCTCACCCACCCTTTAACATAAC........................................................................................................... 28 0 2 1.50 3 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAAGTTCAAACTGTCCCCCTTTGG.... 24 0 3 1.33 4 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCGTGATAAGATCGACATTGGTCAAGT....................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTGATAAG........................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTGTAAACAAAGAGCATGGTGATAAGAT...................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGGTGATAAGATCGACATTGGTC........................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TAAACAAAGAGCATGGTGATAAGA....................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ACAGCGAGTCCCATGCATATT.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATGGTGATAAGATCGACATTGGTC........................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGGTGATAAGCTCGACATTGGTCAAGT....................... 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACATTTCTAATATTGTAAACAAAGAGCAT................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTGATAAGATA..................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCA.......................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AGCATGGTGATAAGATCGAC.................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AGCATGGTGATAAGATCGACATTGG............................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TAAACAAAGAGCATGGTGATAAG........................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACAAAGAGCATGGTGATAAGATC..................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAT......................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CATGGTGATAAGATCGACATTGGT............................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGGTGATAAGATCGACATTGGTCAAGT....................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACAAAGAGCATGGTGATAAGAT...................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGCT...................... 27 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AACAAAGAGCATGGTGATAAGATCGACA................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTGATAA......................................... 24 0 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TATGGTGATAAGATCGACATTGGTCAAG........................ 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CATAGTGATAAGATCGACATTGGTCGA......................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTATAAACATTTCTA..................................................................... 26 0 20 0.80 16 0 0 9 0 0 0 0 5 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGGTCAAGTTCAAACTGTCCCCCTT....... 26 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAAGTTCAAACTGTCCCCCTTTGGTA.. 26 0 3 0.67 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CATATCCATAGTCTCACCCACCCTT.................................................................................................................... 25 0 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AATATTGTAAACAAAGAGCATGGTG............................................. 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGGTCAAGTTCAAACTGTCCCCCT........ 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTGTAAACAAAGAGCATGGTGATA.......................................... 24 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ATATTGTAAACAAAGAGCATGGTG............................................. 24 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTGTAAACAAAGAGCATGGTGATC.......................................... 24 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................TGTAAACAAAGAGCATGGTG............................................. 20 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGACATTGGTCAAGTTCAAACTGTCCC........... 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TATCCATAGTCTCACCCACCCTTTAACAT.............................................................................................................. 29 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGACATTGGTCAAGTTCAAACTGT.............. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAAGTTCAAACTGTCCCCCTTTGGTAG. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGACATATCCATAGTCTCACCCAC........................................................................................................................ 24 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAAGTTCAAACTGTCCCCCTTTGGTAGA 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATATCCATAGTCTCACCC.......................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATATCCATAGTCTCACCCACCCTT.................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AAGTTCAAACTGTCCCCCTTTGGT... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGACATTGGTCAAGTTCAAACTGTCC............ 26 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAAGTTCAAACTGTCCCCCTTTGGTA.. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGGTCAAGTTCAAACTGTCCCCC......... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAAGTTCAAACTGTCCCCCT........ 21 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................TGGGTCAAGTTCAAACTGTCCCCC......... 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTACAAACTGTCCCCCTTTGGTAG. 24 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACCCATAGTCTCACCCACCCTTTAACA............................................................................................................... 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CATGGTGATAAAATCGACATTG.............................. 22 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGGTCAAGTTCAAACTGTCCCCCTA....... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CATATCCATAGTCTCACCCAG........................................................................................................................ 21 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACATTTCTAATATTGTAAACGAAGATTA.................................................. 28 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACATTGGTCAAGTTCAAACTGTCCC........... 27 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTATAAACATTTCTAA.................................................................... 27 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AAGCATAAGCACAAGTATAAACATTTC....................................................................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AGGAGGTATATTAGAAAA............................................................................................................................................................................................ 18 2 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTATAAACA........................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAAGTATAAACGTTTCTAATATTG............................................................... 25 1 20 0.10 2 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAAGTATAAACATTTCTAATATTGT.............................................................. 26 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................TGGTCAAGTTCAAGCTGCC............. 19 2 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTGTAAACATTTCT...................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ATAAGCACAAGTATAAAC............................................................................ 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GCACAAGTATAAACGTTTCTAATATTGT.............................................................. 28 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTATAAACATTTCTAAAA.................................................................. 29 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTATAAACATTTCTAAT................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGCATAAGCACAAGTATAAAC............................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CACAAGTATAAACATTTCTAAT................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAAGTATAAACATTTCTAATATT................................................................ 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................ACGAGTATAAACATTTCTAATATTGTAA............................................................ 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATTTCTTATGCATCACACA................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................CTAATATTGTAAACAAAGAGC................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................CATAAGCACAAGTATAAACATTT........................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAAGTATAAACATTTCTAATATTGT.............................................................. 25 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATAAGCACAAGTATAAACATTTCTCA.................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TAACATAACTTAGCACATAAGC.............................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCTAATATTGTAAACAAAGAG.................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................TATATAGTGACATATCCATAG.................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGCATAAGCACAAGTATAAACATT......................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAAGTATAAACATTTCTAATATTGTAA............................................................ 28 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATTCTAACCGTCTGTCGCTCAGGGTACGTATAAAGTATATTAACGTCGTCCATATTATCTTTTAATTATAATAAAGAATACGTTATGTATATATATATATATATATCACTGTATAGGTATCAGAGTGGGTGGGAAATTGTATTGAATCGTGTATTCGTATTCGTGTTCATATTTGTAAAGATTATAACATTTGTTTCTCGTACCACTATTCTAGCTGTAACCAGTTCAAGTTTGACAGGGGGAAACCATCT
**************************************************...............................((((((......)).)))).......................................**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060673
9_ovaries_total
 M047
female body
 V053
head
 SRR060678
9x140_testes_total
 SRR060688
160_ovaries_total
 V116
male body		 SRR060681
Argx9_testes_total
 SRR060654
160x9_ovaries_total
 SRR060680
 9xArg_testes_total
 GSM1528803
follicle cells		 SRR060660
Argentina_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR1106713
embryo_0-2h
 SRR1106714
embryo_2-4h
 SRR1106724
embryo_12-14h
 SRR060663
160_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060655
9x160_testes_total
 SRR060689
160x9_testes_total
 M027
male body		 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR1106720
embryo_8-10h
 SRR1106729
mixed whole adult body
 V047
embryo
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATATT.............................................................................. 26 0 20 44.65 893 374 294 201 0 0 0 2 0 0 6 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATATATATCACTGTATAGGTATCAGAGT............................................................................................................................. 28 0 1 8.00 8 0 1 1 0 1 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACCACTATTCTAGCTGTAACCAGTTCA....................... 27 0 1 7.00 7 0 0 0 3 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATATATCACTGTATAGGTATCAGAGT............................................................................................................................. 26 0 2 4.50 9 3 0 0 0 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTGTATTCGTATTCGTGTTCATATT.............................................................................. 25 0 20 4.30 86 0 0 23 0 0 51 0 0 0 3 0 0 0 8 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATTCGTGTTCATATTTGTAAAGATT.................................................................... 25 0 20 3.95 79 0 0 0 78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGAATCGTGTATTCGTATTCGTGT..................................................................................... 24 0 20 3.05 61 15 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCGTGTTCATATTTGTAAAGATT.................................................................... 24 0 20 2.70 54 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTATTCGTGTTCATATT.............................................................................. 24 0 20 2.65 53 0 0 0 0 0 0 0 28 0 0 0 0 0 0 16 0 1 6 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AACATTTGTTTCTCGTACCACTATTCT....................................... 27 0 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATCGTGTATTCGTATTCGTGTTCATATT.............................................................................. 28 0 20 1.60 32 0 0 11 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCGTGTATTCGTATTCGTGTTCATATT.............................................................................. 27 0 20 1.10 22 15 0 0 1 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATAACATTTGTTTCTCGTACCACTATTCT....................................... 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGTGGGTGGGAAATTGTATTGAATCGT..................................................................................................... 27 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTCTCGTACCACTATTCTAGCTGT................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GCGCAGGGTAGGTATAAAGTT...................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TATATATCACTGTATAGGTATCAGAGT............................................................................................................................. 27 0 2 1.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGTTTCTCGTACCACTATTCT....................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAAGGGTGGGAAATTGTATTGAATCGT..................................................................................................... 27 2 2 1.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCAAGTTTGACAGGGGGAAACCAT.. 24 0 3 1.00 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGAGTTCAAGTTTGACAGGGGGAAACCAT.. 29 1 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ACATTTGTTTCTCGTACCACTATTCT....................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ATATATATATCACTGTATAGGTATC.................................................................................................................................. 25 0 20 0.95 19 3 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CTTGTATTCGTATTCGTGTTCATATT.............................................................................. 26 1 20 0.85 17 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGTTCAAGTTTGACAGGGGGAAACCAT.. 27 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GTATTCGTATTCGTGTTCATATT.............................................................................. 23 0 20 0.65 13 4 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TATATATATATCACTGTATAGGTATC.................................................................................................................................. 26 0 20 0.60 12 0 11 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTATTGAATCGTGTATTCGTATTCGTGT..................................................................................... 28 0 20 0.60 12 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GGGAAATTGTATTGAATCGT..................................................................................................... 20 0 20 0.55 11 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TATATATCACTGTTTAGGTATCAGAGT............................................................................................................................. 27 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AATTGGGTGGGAAATTGTATTGAAT........................................................................................................ 25 2 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTATATCACTGTATAGGTATCAGAGT............................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAATATATCACTGTATAGGTATCAGAGT............................................................................................................................. 28 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTTTTCGTGTTCATATT.............................................................................. 26 1 20 0.40 8 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TATTGAATCGTGTATTCGTATTCGTGT..................................................................................... 27 0 20 0.40 8 0 1 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTGGGAAATTGTATTGAATCGT..................................................................................................... 23 0 20 0.35 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AATCGTGTATTCGTATTCGTG...................................................................................... 21 0 20 0.35 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGTGGGTGGGATATTGTATTGAATCGT..................................................................................................... 27 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AATGGGTGGGAAATTGTATTGAA......................................................................................................... 23 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AATGGGTGGGAAATTGTATT............................................................................................................ 20 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAAATGGGTGGGAAATTGTATTGA.......................................................................................................... 24 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGTGGGTGGGAAATTGTAT............................................................................................................. 19 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGTTCAAGTTTGACAGGGGGAAACCA... 26 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GAGTGGGTGGGAAATTGTATTGAAT........................................................................................................ 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CAGTTCAAGTTTGACAGGGGGAAACCA... 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCAAGTTTGACAGGGGGAAACCATCT 26 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TGTTCATATTTGTAAAGATT.................................................................... 20 0 20 0.30 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGGTGGGAAATTGTATTGAATCGTGT................................................................................................... 26 0 20 0.30 6 0 1 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATTTGTAAAGATTATAACATTTGTTT....................................................... 26 0 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATATATATCACTGTATAGGTATC.................................................................................................................................. 23 0 20 0.30 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CAGTTCAAGTTTGATAGGGGGAAACCAT.. 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATATATATATATCACTGTATAGGTATC.................................................................................................................................. 27 0 20 0.25 5 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGGGAAATTGTATTGAATCGTGTAT................................................................................................. 25 0 20 0.25 5 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACCAGTTCAAGTTTGACAGGGGGA........ 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATATCACTGTATAGGTCTCAGAGT............................................................................................................................. 24 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GTGGGTGGGAAATTGTATTGAA......................................................................................................... 22 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTC................................................................................... 21 0 20 0.25 5 0 0 0 0 0 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTTCATATTTGTAAAGATTATAACAT............................................................. 26 0 20 0.20 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATCGTGTATTCGTATTCGTGTTCATAT............................................................................... 27 0 20 0.20 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATGTT.............................................................................. 26 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GTGGGAAATTGTATTGAAT........................................................................................................ 19 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATTCGTGTTCATATTTGTAAAGATTAT.................................................................. 27 0 20 0.20 4 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GGGAAATTGTATTGAATCGTGTATTCGT............................................................................................. 28 0 20 0.20 4 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATATTT............................................................................. 27 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATTTGTAAAGATTATAACATTTGTT........................................................ 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTTTTCGTGTTCATATT.............................................................................. 24 1 20 0.15 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGCGTTCATATT.............................................................................. 26 1 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTGGGAAATTGTATTGAA......................................................................................................... 19 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTATTGAATCGTGTATTCGTATT.......................................................................................... 23 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATCTT.............................................................................. 26 1 20 0.15 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATATCACTGTATAGGTATC.................................................................................................................................. 19 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATATATATATATCACTGTATAGGT..................................................................................................................................... 25 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTGTATTGAATCGTGTATTC............................................................................................... 20 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATCGTGTATTCGTATTCGTGTTCATA................................................................................ 26 0 20 0.15 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATATATATATATATCACTGTATAGGTATC.................................................................................................................................. 29 0 20 0.15 3 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCGTGTATTCGTATTCGTGTTCATA................................................................................ 25 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGGGAAATTGTATTGAATCGT..................................................................................................... 21 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTAAGTATAATAAAGACTA........................................................................................................................................................................... 19 2 20 0.15 3 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................TTGACAGGGGGAAACCATCT 20 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AAAAAGTGGGTGGGAAATTGTAT............................................................................................................. 23 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................ATGTATAGGTATCAGAGT............................................................................................................................. 18 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAAGAGTGGGAAATTGTATTGAATCGT..................................................................................................... 27 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGTGAGTGGGAAATTGTATTGAATCGT..................................................................................................... 27 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AATTAGTGGGAAATTGTATTGAATCGT..................................................................................................... 27 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGGGTGGGAAATTGTATTGAAT........................................................................................................ 22 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATATATATATATATCACTGTATAGGTAT................................................................................................................................... 28 0 20 0.10 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TATATATATATATATCACTGTATAGGTAT................................................................................................................................... 29 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTATTCGTGTTCATATTT............................................................................. 25 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAGCTGTATCCAGTTCAAG..................... 19 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGGGTGGGAAATTGTATTGAATCGT..................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TCGTATTCGTGTTCATATTTGTAAAGATT.................................................................... 29 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0
............................................................................................................................................................................TTGTAAAGATTATAACATTTGTTTCT..................................................... 26 0 20 0.10 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCGTGTATTCGTATTCGTGT..................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GTGTTCATATTTGTAAAGATTATAACAT............................................................. 28 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATATATATATATATCACTGTATAGGT..................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GTGGGAAATTGTATTGAATCGTGTAT................................................................................................. 26 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................TCGTGTATTCGTATTCGTGTTCATAT............................................................................... 26 0 20 0.10 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GGGAAATTGTATTGAATCGTGTATT................................................................................................ 25 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATCCGTATTCGTGTTCATATT.............................................................................. 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ATTGAATCGTGTATTCGTATTCGTGT..................................................................................... 26 0 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CCTATTCGTGTTCATATTTGTAAAGATT.................................................................... 28 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGTATATATATATCACTGTATA........................................................................................................................................ 22 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAAATTGTATTGAATCGTGTATTCGT............................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGAATCGTGTATTCGTATTCGTGTTC................................................................................... 26 0 20 0.10 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTCTTCGTGTTCATATT.............................................................................. 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCGTGTTCATATTTGTAAAGATTATA................................................................. 26 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATAT............................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GGAAATTGTATTGAATCGTGTATTCGT............................................................................................. 27 0 20 0.10 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTGGGAAATTGTATTGAATCGTGTAT................................................................................................. 27 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TGAAATTGTATTGAATCGTGTAT................................................................................................. 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TATCACTGTATAGGTATC.................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGAATCGTGTATTCGTATT.......................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATATATATCACTGTATAGGTAT................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TCATATTTGTAAAGATTATAACATTTGT......................................................... 28 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTTCATATTTGTAAAGATTATAACATT............................................................ 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGCTCATATT.............................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTTTCGTGTTCATATTTGTAAAGATT.................................................................... 26 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAAATTGTATTGAATCGTGTATTCGTA............................................................................................ 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TATTCGTATTCGTGTTCATATT.............................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TCATATTTGTAAAGATTA................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TCGTATTCGTGTTCATATTTGTAAAGAT..................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGTGTTCATATTTGCAAAGATTAT.................................................................. 24 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TATATATATATCACTGTATAGGTAT................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTGTATTCGTATTCGTGTTCATATC.............................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATACT.............................................................................. 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTGAATCGTGTATTCGTATTCGTGTT.................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................GTGTATTCGTAATCGTGTTCATATT.............................................................................. 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGTGTTCATATTTGTAAAGATTATAAC............................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GGGAAATTGTATTGAATCGTGT................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TATATATATATATATCACTGTAT......................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATAC............................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CGTATTCGTGTTCATATTTGTAAAG....................................................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGGGTATTCGTATTCGTGTTCATAT............................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GTATTCGTGTTCATATTTGTAAAGAGT.................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GTGGGTGGGAAATTGTATT............................................................................................................ 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATATTTG............................................................................ 28 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATTTGTAAAGATTATAACATTTGTTTCT..................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GAATCGTGTATTCGTATTCGTGTTCATA................................................................................ 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTGTATTCGTTTTCGTGTTCATATT.............................................................................. 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCGTGTATTCGTATTCGTCTTCATATT.............................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGGTGGGAAATTGTATTGAATCGT..................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATATATATATATCACTGTATAGGTATC.................................................................................................................................. 28 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTTCATATTTGTAAAGATTA................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATCGTGTATTCGTATTCGTG...................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TCGTGTATTCGTATTCGCGTTCATATT.............................................................................. 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AATCGTGTATTCGTATTCGTGTTCATATT.............................................................................. 29 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTGTCTTCGTATTCGTGTTCATATT.............................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................CGTGTATTAGTATTCGTGTTCATATT.............................................................................. 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGTGTTCATACTTGTAAAGATTAT.................................................................. 24 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGACAGGGGGAAACCATCT 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATTCGTGTTCATATTTGTAAAGATTA................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTATTCGTGTTC................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGGTGGGAAATTGTATTGAAT........................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GTATTCGTGTTCATATTTGTAAAGATT.................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ATATATATATCACTATATAGGTATC.................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GGAAATTGTATTGAATCGTGTAT................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTCTTCGTATTCGTGTTCATATT.............................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AAATTGTATTGAATCGTGTATTCGTAT........................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCGTGTTCATATTTGTAAAGATTAT.................................................................. 26 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATATATATATATCACTGTATAGCT..................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTAATCGTGTTCATATT.............................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGGTGGGAAATTGTATTGAATCGTGTA.................................................................................................. 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGGTGGGAAATTGTATTGAATCG...................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTGC................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTGTATTGAATCGTGTATTCGTA............................................................................................ 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTTGTATTCGTGTTCATGTT.............................................................................. 26 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ATATTCGTGTTCATATTTGTAAAGATT.................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTTCATATTTGTAAAGATT.................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATCGTGTATTCGTATTCGTGTTCATACT.............................................................................. 28 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTGTATTGAATCGTGTATTCG.............................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CGTATTCGTGTTCATATT.............................................................................. 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AATCGTGTATTCGTATTCGTGT..................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TATTCGTGTTCATATTTGTAAAGATTC................................................................... 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCTTATTCGTGTTCATATT.............................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTATGCGTGTTCAT................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CTTGAATCGTGTATTCGTATTCGTGT..................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGGGAAATTGTATTGAATCGTG.................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GAATCGTGTATTCGTATTCGT....................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTAGCTGTAACCAGTTCTAGTTT.................. 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGGGTGGGCACTTGTATTGAATCGT..................................................................................................... 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GAATCGTGTATTCGTATTCGTGTTCAT................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTATTCGTATTCGTGTTCAT................................................................................. 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTG...................................................................................... 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCGTGTTCATATTTGTAAAGATT.................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAAATTGTATTGAATCGTGTA.................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................CGTGTTCATATTTGCAAAGATTATA................................................................. 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGGGTGGGAAATTGTATTGAATCGTGT................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATATATATCACTGTATAGGTAT................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................ATGTATATATATATATATAT................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................TGTATTGCATCGTGTATTCGTATTCGTGT..................................................................................... 29 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AATTGAATCGTGTATTCGTATTCGTGT..................................................................................... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GTATTCGTATTCGTGTTCATATTTGTAA......................................................................... 28 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATAACATTTGTTTCTCGAACCACTATTC........................................ 28 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GGGAAATTGTATTGAATCGTGTAT................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CTGTATTCGTATTCGTGTTCATATT.............................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGGGTATTCGTATTCGTGTTCATATT.............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GTATTCGTGTTCATATTAGTAAAGATT.................................................................... 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTTGTAAAGATTATAACATTTG.......................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTGTATTCGTATTCGTGTTCATAT............................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTGTATTCGTATTCGTGTTCATAGT.............................................................................. 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TATATATATATCACTGTATAGGTATCA................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................GTGGGAAATTGTATTGAATCGTGTATT................................................................................................ 27 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GGAAATTGTATTGAATCG...................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CGTATTCGTGTTCATATTT............................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CCTGTATTCGTATTCGTGTTCATATT.............................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CGTATTCGTGTTCATATTTGTAAAGATT.................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12958:1197349-1197599 - dvi_9705 TAAGATTGGCAGA--CAGCGAGTCCCATGCATATTTCATATAATTGCAGCAGGTATAATAGAAAATTAATATTATTTCTTATGCAATACATATATATATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------TAACTTAGCACATAAGCATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGTAAACAAAG--------------AGCATGGTGATAAGATCGACATTGGTCAAGTTCAAAC-----TGTCC---CCCTTTGGTAGA
droMoj3 scaffold_5550:1-149 + TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAC--------------------ATATCCATAGTCG-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------TAACTTAGCACATAAGCATAAGCACAATTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGTAAACAAAG--------------AGCCTGGTGATAACATCGACATTGGTCAAGATCAAAC-----TGTCC---CCCTTTGGTAGA
droGri2 scaffold_14906:13568120-13568269 - TAAGATTGGCAGA--CAACGAACTCCATGCGTATTTCACATCATCGCAGCAGGTAAAATTTTAAATTACTAAATATTTTGTAGCAATAAATGGAATTCTAAA-----------------------------------------------------------AAGAGATTGGT--------------------AGCTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTTTAT------------TACTACGCTA---TAGCATAGATTA
droWil2 scf2_1100000004909:3934903-3935046 + GCAAACTAACAAAGACAGTTCAAGTTTAATGTATTTCGTACCTTTGAATAACATTAAAA------------------------------------ATA--AAACCAAACAAAATATATACAT------------------------------------ACATATATAGTGAC--------------------TTAAATGGAAACTTGTGCAC---------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------ATTTGT--------------------------------------------------------------------------TAA---AATT---GGCAATTAAGTA
dp5 2:18279587-18279742 - TAAAATCGGAAAG--CAGCGAGTACCCTGCGTATTTCACATTATTGCTGCAGGTAAATTT-----------------------------------------------------------------------TACTTTTTAA--------------------TAATCAATAACAATTCTATAATTCTCTTTATAAAACTCTAGT----------------------------------------------------------------GAC-TTAGAACCTATT-C--------CTGTTAAAGA------TGAAT----------------------------------------------------------------------------------------------------------------------------------------TGGACATA------------------------------------------------------------------------AACATAA
droPer2 scaffold_3:647284-647472 - TAAAATCGGAAAG--CAGCGAGTACCCTGCGTATTTCACATTATTGCTGCAGGTAAATTT-----------------------------------------------------------------------TACTTTTTAA--------------------TAATCAATAACAATTCTATAATTCTCTTTATAAAACTCTAGT----------------------------------------------------------------GAC-TTAGAACCTATT-C--------CTGTT----------------------------------------------------------------------------------------------------------------------AAATTAAATTAATATT--------AAAT-AGACTTAT---------------------------------------------GAAAAATGT-----TGAC-CTTTT---TAATGTTGAAAA
droAna3 scaffold_12947:943495-943608 + ATATATAC---------------------------------------------------------------------------------------GTATATA-----------------------------------------------------------TATATAGTAAC--------------------ATATTCACTCTCA-------------------------------------------------------------------------CACCCAT--------CTGCT-AATA--------TCCAATTACTGCAGCATAAATATTTTGGT-------------------------------------------------------------------G------------------------ATCCATTA----AAGTCAAGTAAACA------------------------------------------------------------------------AATAACA
droBip1 scf7180000396745:36093-36185 + ATATATAA--------------------------------------------------------------------------------------TATATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGCATTATACATAAA----CTATGTAAATGTCCACACACCCACACACTCAC-ACATAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATT
droKik1 scf7180000302461:129598-129649 + CAAAATTGGCAAA--CAGCGAATACCCTGTGTCTTCCATATAATTGCTGCTGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000451635:1232-1342 - ATTTATAAT-------------------------------------------------------------------------ATAATATATTGATTTATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGCAC--CACATAAA----CTATGTACATGTCTACACACCCATACACTCAC-ACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCTAATACT
droEle1 scf7180000491047:78844-78916 + TAAAATTGGTAAA--CAGCGAGTTCCATGCGTCTTCCATATAATCGCTGCAGGTAGGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAATA------------------------------------------------------------------------AAAATTA
droRho1 scf7180000761624:4341-4644 + GTGATTTCC-GTA----------------TTTATTT-ATTTTGTTCAACCAATTCTAGTGTGAACATCACATTATTTATTATT------------------------------------------------------GCGTGAACATTAAATACCGTGATATATATAGTAAC--------------------ATACCCACACCCA--CATATCCACCACATAAAGTAACATACACACACCCACATACCTACCACATAAACA-----------------TATTTAC--------ATTA------CGCATTTGTC---------------------------A--------------------------CACCCAAAATCATCGGCTCCCAAGAGTCGCCAATTAATATA------------------------AACATC--CTC-TTGAGTTATAAACAAATGAATAAACCCCAAATTGTCGGCTCCCACG--------------------AC-----TGACC---AATTTATGTAAA
droBia1 scf7180000297011:1483-1600 - AAATAATTT-ATA--TAAT---------------------------------------------------------------TTTTTATATATTTATATATA-----------------------------------------------------------TATATATTTAT--------------------ATATTCAATA---------------------------------------------------------------------------------------TAAT-----------------------------------------------T-------------------------------------------------------------------AATTTAATTTAATTTATA-----------------T-----------ATATA------------------------------TGAATAATAT------------ATTAATAATT---AAGTATTATAAA
droTak1 scf7180000413341:9235-9363 - GCAAGTTTAA------------------------------------------------TTAAAAATTACAATAAAATACAATAAAATATATAAAAATAT--------------------------------AAATATATAA--------------------AAAAAAATAATAATAATAAAAATATTTTAAAAAAACTATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATAT------------ATAAA---TA---AAAAAATAAATA
droEug1 scf7180000409724:7877-8031 + TATAAAAAAGA-------------------------------------------------------------------------------AAAATATATACA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGTA---CACATACT---CCTATGCACATGTCCACACACCTCCACT----------------TTAGTCAT-A-------------AGCAAAAT-----------------------------------------------A-------------------------------------------------------------------TAGAT--------------------------------------------------------ACCATTATGTAAACT---TAATCGACCATGGAAAATAC------------CCA---GACCTTTATAAA
dm3 chr3L:23832562-23832754 - AAAATA------------------------------------------------------------------------------------TATATATATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAAGTC--CCTAA----GACTTAAGCATATGCCTACATACTAATACACTTACAACATATACACCCCAATACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--ATACCAGAAAG------------AATAAGATTGTTAAAAAAACCCCAATTCTAG------------ATAAG--TCA---CCCACTGGTAGA
droSim2 node_93509:16-99 - ACTAATATT-ATA--TGAT---------------------------------------------------------------TATGTATGTACATATATATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGCCACTTCCATTATTT
droSec2 scaffold_52:59668-59825 + ATATATATTAAAT---ATA---------------------------------------------------------------------------TATACAAATATATATTAAATAT--------------------------------------------------------------------------------ATATACAAATATATATAAA---TATATATAAATATATATACAAATATATA---------------TATAAATAC-A-------------TATACAAT-----------------------------------------------A-------------------------------------------------------------------TACATAATATATATAATA-----------------T-----------AT-------------------------------AATTAATTATAT------------AAAAA-TAAT---AATAATAATAAA
droYak3 v2_chrUn_5270:419-573 + TTAAACTGCCATA--CAACTATATGT---------------------------------------------------------------------ATG--TAATTATATTAAATATGTATAT------------------------------------GCATATATTACCAA--------------------TTCAATG----------CATATA---TGTATGTACATATATATACACATGTAT-----------------------------------------------T-----------------------------------------------ATTCTTCACTTTTTATTGTACCTTGTTATTAAC-AA----------------------------------------------------------------------------------------------------------------------------------------------TCAA---AAACTTAATTAT
droEre2 scaffold_4770:75181-75410 - ATATATATCTATA----------TA---------------------------------------------------------------------TATA--CACATATATA--ATATATATAATATATATATAATTATATATATACATAATATATAAATATATATATAGTAGC--------------------ATATGTACCATAG--TATAA----CACTTTGTCACACACACACACAG-TACATATGTACCACTTGATCA-----------------CACCCAC--------CCAA------TCCATTTACCCCAACACATAAGTCAGAT------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGCGACAATAACAATTTCG----------------------------GCCGCGTTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TAAGATTGGCAGA--CAGCGAGTCCCATGCATATTTCATATAATTGCAGCAGGTATAATAGAAAATTAATATTATTTCTTATGCAATACATATATATATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------TAACTTAGCACATAAGCATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGTAAACAAAG--------------AGCATGGTGATAAGATCGACATTGGTCAAGTTCAAAC-----TGTCC---CCCTTTGGTAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGT...............................26136.00360000000080001000000000000325000000014030000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAG................................25110.0010000000001000100000000000002000001022010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTGATAAGA...............................................2619.009004110000001000000000000000000000000110000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGATCGACATTGGTCAAGT...............................2316.006000000003000100000002000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGTT..............................2715.005000000000000000000000000002000001011000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGTGATAAGATCGACATTGGTCAAG................................2815.005000000000000200000000000000000100002000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAAGTTC.............................2814.004000000000000000000000000001000000001020000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAA.................................2413.003000000000000100000000000101000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTC----TAATATTGTAAACAAAG--------------AGCA..........................................................2813.003000000000000000000000000000200000000100000000000000000000000000
.................................................................................................................................................................................................TATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------....................................................................................................................................................................................................................................2832.337006100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTGATAAGATC.............................................2812.002002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTGATAAGAT..............................................2712.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAAGATCGACATTGGTCAAG................................2612.002000000200000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATTGTAAACAAAG--------------AGCATGGTGA....................................................2621.503000000000000000000001000000000000000200000000000000000000000000
.....................................................................................................................................................................................................CATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------TAAC................................................................................................................................................................................................................................2821.503000000000000000000000000100000000000020000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTCAAAC-----TGTCC---CCCTTTGG....2431.334003100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTGATAAG................................................2511.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAACAAAG--------------AGCATGGTGATAAGAT..............................................2811.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAAGATCGACATTGGTC...................................2311.001000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAAAG--------------AGCATGGTGATAAGA...............................................2411.001001000000000000000000000000000000000000000000000000000000000000
............A--CAGCGAGTCCCATGCATATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGATAAGATCGACATTGGTC...................................2411.001000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTC----TAATATTGTAAACAAAG--------------AGCAT.........................................................2911.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTGATAAGATA.............................................2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCA..................................2311.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATGGTGATAAGATCGAC..........................................2011.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATGGTGATAAGATCGACATTGG.....................................2511.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAAAG--------------AGCATGGTGATAAG................................................2311.001000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAG--------------AGCATGGTGATAAGATC.............................................2311.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATAAGATCGACATTGGTCAT.................................2411.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGTGATAAGATCGACATTGGT....................................2411.001000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATAAGATCGACATTGGTCAAGT...............................2711.001000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAG--------------AGCATGGTGATAAGAT..............................................2211.001000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAG--------------AGCATGGTGATAAGATCGACA.........................................2811.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTGATAA.................................................2421.002001000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TA...........................................................................................26200.8016000020000000000000000000009000000050000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCAAGTTCAAAC-----TGTCC---CCCTT.......2640.753003000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTCAAAC-----TGTCC---CCCTTTGGTA..2630.672001100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................C--------------------ATATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTT................................................................................................................................................................................................................................................2530.672000000000000000000000000000200000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATTGTAAACAAAG--------------AGCATGGTG.....................................................2520.501000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCAAGTTCAAAC-----TGTCC---CCCT........2540.502002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAACAAAG--------------AGCATGGTGATA..................................................2420.501000000000001000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTAAACAAAG--------------AGCATGGTG.....................................................2420.501000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAACAAAG--------------AGCATGGTGATC..................................................2420.501000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCATGGTG.....................................................2020.501000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACATTGGTCAAGTTCAAAC-----TGTCC---C...........2730.331000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................TATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------T...................................................................................................................................................................................................................................2930.331000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACATTGGTCAAGTTCAAAC-----TGT.................2430.331001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTCAAAC-----TGTCC---CCCTTTGGTAG.2730.331001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGAC--------------------ATATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------....................................................................................................................................................................................................................................................2430.331000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTCAAAC-----TGTCC---CCCTTTGGTAGA2830.331001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................ATATCCATAGTCT-------------------------------------------------------------------------CACCC..............................................................................................................................................................................................................................................................1830.331001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................ATATCCATAGTCT-------------------------------------------------------------------------CACCCAC--------CCTT................................................................................................................................................................................................................................................2430.331000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCAAAC-----TGTCC---CCCTTTGGT...2430.331001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACATTGGTCAAGTTCAAAC-----TGTCC---............2630.331000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTTCAAAC-----TGTCC---CCCTTTGGTA..2730.331001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCAAGTTCAAAC-----TGTCC---CCC.........2440.251001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTTCAAAC-----TGTCC---CCCT........2140.251000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCAAGTTCAAAC-----TGTCC---CCCTA.......2650.201001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................C--------------------ATATCCATAGTCT-------------------------------------------------------------------------CACCCAG--------....................................................................................................................................................................................................................................................2150.201000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAA..........................................................................................27200.153000000000000000000000000030000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAGCATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----.............................................................................................27200.153003000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACA.....................................................................................................20200.102000000000000000000000000020000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGT....................................................................................26200.102000000000000000000000000000010010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................ATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AAC......................................................................................................18200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAAT.........................................................................................28200.051000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AGCATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AAC......................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAAT.........................................................................................22200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATT......................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TAATATTGTAAACAAAG--------------AGC...........................................................21200.051100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATTT..................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGT....................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................T-AACA------TAACTTAGCACATAAGC...................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----TAATATTGTAAACAAAG--------------AG............................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................TATATAGTGAC--------------------ATATCCATAG...............................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AGCATAAGCACAAGTAT-------------------------------------------------------------------A------------------------AACATT...................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAAGTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGTAA..................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
droMoj3
TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAC--------------------ATATCCATAGTCG-------------------------------------------------------------------------CACCCAC--------CCTTT-AACA------TAACTTAGCACATAAGCATAAGCACAATTAT-------------------------------------------------------------------A------------------------AACATTTC----TAATATTGTAAACAAAG--------------AGCCTGGTGATAACATCGACATTGGTCAAGATCAAAC-----TGTCC---CCCTTTGGTAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACAAAG--------------AGCCTGGTGATAAC................................................2511.001100000
droGri2
TAAGATTGGCAGA--CAACGAACTCCATGCGTATTTCACATCATCGCAGCAGGTAAAATTTTAAATTACTAAATATTTTGTAGCAATAAATGGAATTCTAAA-----------------------------------------------------------AAGAGATTGGT--------------------AGCTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTTTAT------------TACTACGCTA---TAGCATAGATTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GCAAACTAACAAAGACAGTTCAAGTTTAATGTATTTCGTACCTTTGAATAACATTAAAA------------------------------------ATA--AAACCAAACAAAATATATACAT------------------------------------ACATATATAGTGAC--------------------TTAAATGGAAACTTGTGCAC---------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------ATTTGT--------------------------------------------------------------------------TAA---AATT---GGCAATTAAGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
TAAAATCGGAAAG--CAGCGAGTACCCTGCGTATTTCACATTATTGCTGCAGGTAAATTT-----------------------------------------------------------------------TACTTTTTAA--------------------TAATCAATAACAATTCTATAATTCTCTTTATAAAACTCTAGT----------------------------------------------------------------GAC-TTAGAACCTATT-C--------CTGTTAAAGA------TGAAT----------------------------------------------------------------------------------------------------------------------------------------TGGACATA------------------------------------------------------------------------AACATAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TAAAATCGGAAAG--CAGCGAGTACCCTGCGTATTTCACATTATTGCTGCAGGTAAATTT-----------------------------------------------------------------------TACTTTTTAA--------------------TAATCAATAACAATTCTATAATTCTCTTTATAAAACTCTAGT----------------------------------------------------------------GAC-TTAGAACCTATT-C--------CTGTT----------------------------------------------------------------------------------------------------------------------AAATTAAATTAATATT--------AAAT-AGACTTAT---------------------------------------------GAAAAATGT-----TGAC-CTTTT---TAATGTTGAAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATATATAC---------------------------------------------------------------------------------------GTATATA-----------------------------------------------------------TATATAGTAAC--------------------ATATTCACTCTCA-------------------------------------------------------------------------CACCCAT--------CTGCT-AATA--------TCCAATTACTGCAGCATAAATATTTTGGT-------------------------------------------------------------------G------------------------ATCCATTA----AAGTCAAGTAAACA------------------------------------------------------------------------AATAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................TAGTAAC--------------------ATATTCACTCTCA-------------------------------------------------------------------------CACCCAT--------C...................................................................................................................................................................................................................................................2811.001010000
droBip1
ATATATAA--------------------------------------------------------------------------------------TATATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGCATTATACATAAA----CTATGTAAATGTCCACACACCCACACACTCAC-ACATAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTSizeHit CountTotal NormTotal
No Reads
droKik1
CAAAATTGGCAAA--CAGCGAATACCCTGTGTCTTCCATATAATTGCTGCTGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATTTATAAT-------------------------------------------------------------------------ATAATATATTGATTTATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGCAC--CACATAAA----CTATGTACATGTCTACACACCCATACACTCAC-ACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCTAATACTSizeHit CountTotal NormTotal
No Reads
droEle1
TAAAATTGGTAAA--CAGCGAGTTCCATGCGTCTTCCATATAATCGCTGCAGGTAGGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAATA------------------------------------------------------------------------AAAATTASizeHit CountTotal NormTotal
No Reads
droRho1
GTGATTTCC-GTA----------------TTTATTT-ATTTTGTTCAACCAATTCTAGTGTGAACATCACATTATTTATTATT------------------------------------------------------GCGTGAACATTAAATACCGTGATATATATAGTAAC--------------------ATACCCACACCCA--CATATCCACCACATAAAGTAACATACACACACCCACATACCTACCACATAAACA-----------------TATTTAC--------ATTA------CGCATTTGTC---------------------------A--------------------------CACCCAAAATCATCGGCTCCCAAGAGTCGCCAATTAATATA------------------------AACATC--CTC-TTGAGTTATAAACAAATGAATAAACCCCAAATTGTCGGCTCCCACG--------------------AC-----TGACC---AATTTATGTAAASizeHit CountTotal NormTotal
No Reads
droBia1
AAATAATTT-ATA--TAAT---------------------------------------------------------------TTTTTATATATTTATATATA-----------------------------------------------------------TATATATTTAT--------------------ATATTCAATA---------------------------------------------------------------------------------------TAAT-----------------------------------------------T-------------------------------------------------------------------AATTTAATTTAATTTATA-----------------T-----------ATATA------------------------------TGAATAATAT------------ATTAATAATT---AAGTATTATAAASizeHit CountTotal NormTotal
No Reads
droTak1
GCAAGTTTAA------------------------------------------------TTAAAAATTACAATAAAATACAATAAAATATATAAAAATAT--------------------------------AAATATATAA--------------------AAAAAAATAATAATAATAAAAATATTTTAAAAAAACTATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATAT------------ATAAA---TA---AAAAAATAAATASizeHit CountTotal NormTotal
No Reads
droEug1
TATAAAAAAGA-------------------------------------------------------------------------------AAAATATATACA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAGTA---CACATACT---CCTATGCACATGTCCACACACCTCCACT----------------TTAGTCAT-A-------------AGCAAAAT-----------------------------------------------A-------------------------------------------------------------------TAGAT--------------------------------------------------------ACCATTATGTAAACT---TAATCGACCATGGAAAATAC------------CCA---GACCTTTATAAASizeHit CountTotal NormTotal
No Reads
dm3
AAAATA------------------------------------------------------------------------------------TATATATATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAAGTC--CCTAA----GACTTAAGCATATGCCTACATACTAATACACTTACAACATATACACCCCAATACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--ATACCAGAAAG------------AATAAGATTGTTAAAAAAACCCCAATTCTAG------------ATAAG--TCA---CCCACTGGTAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAACCCCAATTCTAG------------ATAAG--T.................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCCCAATTCTAG------------ATAAG--TCA---CC..........26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAAGT.............................................................................................................................................................................................................................................................................................................................................2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGATGTATCCAACA-----------------G--ATACCAGAAA.................................................................................28150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACA-----------------G--ATACCAGAAAG------------A...................................................................20150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAACA-----------------G--ATACCAGAAAG------------A...................................................................21150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACA-----------------G--ATACCAGAAAG------------AATAAG..............................................................25150.1320000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TATATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAAG..............................................................................................................................................................................................................................................................................................................................................2880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCC...................................................................................................................23190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................A-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCA..................................................................................................................25190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................ACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCA..................................................................................................................19190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGGATGTATCCAACA-----------------G--A..........................................................................................20190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110
...............................................................................................................................................................................................................................................................................A-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------..............................................................................................28190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--AT.........................................................................................24190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--ATAC.......................................................................................26190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATGTATCCAACA-----------------G--ATACCAGA...................................................................................25190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................T-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--...........................................................................................21190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------CTCCGGATGTATCCAAC................................................................................................................18190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--ATACC......................................................................................29190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................T-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--ATACC......................................................................................26190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATC....................................................................................................................25190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................A-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAA.................................................................................................................26190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAA.................................................................................................................23190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--...........................................................................................20190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................ACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--ATACC......................................................................................28190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATTCTAG------------ATAAG--TCA---CCCAC.......23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAG------------AATAAGATTGTTAAAAAAACCCC.............................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAAACCCCAATTCTAG------------ATAAG--..................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------AATAAGATTGTTAAAAAAACCCCAAT..........................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CCTACATACTAATACACTTACAACATA........................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AAGCATATGCCTACATACTAATA.....................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----------------G--ATACCAGAAAG------------AATA................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGATTGTTAAAAAAACCCCAA...........................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TA-----------------------------------------------------------TATATAGTGAC--------------------ATATCCATAAGTC--..........................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------AATAAGATTGTTAAAAAAACCCCA............................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGTTAAAAAAACCCCAATTCTAG------------A........................29200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCTAG------------ATAAG--TCA---CCCA........21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTAAAAAAACCCCAATTCTAG------------.........................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAACCCCAATTCTAG------------ATAAG--TC................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CCAATACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATA........................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-----------------G--ATACCAGAAAG------------AATAAG..............................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
..............................................................................................................................................................................................................................................................................................ATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTA......................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TACAACATATACACCCCAATA............................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AC--------------------ATATCCATAAGTC--CCTAA----G................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AATACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGT.......................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................A-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGT.......................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTACAACATATACACCCCAATACA..........................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAAACCCCAATTCTAG------------ATAAG--TC................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG------------AATAAGATTGTTAAAAAAACCCCA............................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----------------G--ATACCAGAAAG------------AATAAGAT............................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................................................................AA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGT.......................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCAGAAAG------------AATAAGATTG..........................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTAAAAAAACCCCAATTC........................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TACACCCCAATACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------C................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCTAG------------ATAAG--TCA---CCCACTGG....25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------CTCCGGATGTATCCAACC-----------------..............................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCCCAATTCTAG------------ATAAG--TCA---CC..........25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTAG------------ATAAG--TCA---CCCACTGGTA..26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATTCTAG------------ATAAG--TCA---CCCACTGGT...27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGT.......................................................................................................................23200.1020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGATTGTTAAAAAAACCC..............................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGATGTATCCAACA-----------------G--ATACCAGAA..................................................................................27150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATCCAACA-----------------G--ATACCAGAAAG------------AA..................................................................26150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCAACA-----------------G--ATACCAGAAAG------------AA..................................................................23150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATGTATCCAACA-----------------G--ATACCAGAAA.................................................................................27150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACA-----------------G--ATACCAGAAAG------------AATAA...............................................................24150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTATCCAACA-----------------G--ATACCAGAAA.................................................................................25150.0710000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAACA-----------------G--ATACCAGAAAG------------AATAAGAT............................................................28150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCAACA-----------------G--ATACCAGAAAG------------AATAAGAT............................................................29150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGATGTATCCAACA-----------------G--ATACCAGAAA.................................................................................26150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACA-----------------G--ATACCAGAAAG------------AAT.................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATA-----------------------------------------------------------TATATAGTGAC--------------------ATATCC...................................................................................................................................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATT....................................................................................................................27180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCC...................................................................................................................27180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ACAA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCA..................................................................................................................28180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................CT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACC-----------------..............................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AA-------------CATACACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTAT.....................................................................................................................23190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--AA.........................................................................................26190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ACT-----------------------------------------------A-------------------------------------------------------------------CTCCGGATGTATCCAACA-----------------G--AA.........................................................................................25190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGATGTATCCAACA-----------------G--ATAC.......................................................................................20190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
droSim2
ACTAATATT-ATA--TGAT---------------------------------------------------------------TATGTATGTACATATATATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGCCACTTCCATTATTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................24193.426500020014254164000000
..................................................................................................................................................................................................................................................................................................................................................................................CCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGCCACTTCCATTA...2133.00900009000000000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GG........................................................................................................................................................................23192.1641000021023680001000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................24102.1021000000116130000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCC.....................................................................................................................................................................24201.45290001001016200000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTC......................................................................................................................................................................25181.1120000000811001000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTC......................................................................................................................................................................23200.9519000000140032000000
........................................................................................................................................................................TGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGC..............27130.69900000011241000000
....................................................................................................TA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GG........................................................................................................................................................................25110.64700000012400000000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------G.........................................................................................................................................................................25100.60600000003003000000
....................................................................................................TA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTC......................................................................................................................................................................27100.50500000013100000000
..................................................................................................TATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................2460.50300000010000020000
....................................................................................................TA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................26110.36400000021000010000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-A..................................................................................................................................................................24200.35700000003130000000
..................................................................................................TATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GG........................................................................................................................................................................2760.33200000001100000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------...................27200.25500000005000000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-...................................................................................................................................................................25200.25500000020021000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................22200.20400000020000002000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................23100.20200000002000000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------C..................26200.20400000031000000000
.................................................................................................ATATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................2550.20100000001000000000
................................................................................................TATATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................2650.20100000001000000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCC.....................................................................................................................................................................26170.18300010001010000000
..................................................................................................TATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................2560.17100000000010000000
....................................................................................................TA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................23120.17200000000110000000
..................................................................................................TATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................2860.17100000001000000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------...................25200.15300000012000000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------C..................28200.15300000012000000000
.....................................................................................................A-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................22150.13200000000001001000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------C..................30150.13200000011000000000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................24100.10100000001000000000
....................................................................................................TA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCC.....................................................................................................................................................................28100.10100000001000000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------AA.................27200.10200000000020000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------G.........................................................................................................................................................................22200.10200000001010000000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................24110.09100000000001000000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGGC................................................................................................................................................................................................................................................................................................................................................23120.08100000000000010000
...................................................................................................ATA-----------------------------------------------------------TATATAGTGAC--------------------GTATTTGG.................................................................................................................................................................................................................................................................................................................................................22120.08100000000001000000
.........................................................................................................................................................................GAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGC..............26130.08100000000001000000
........................................................................................................................................................................TGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAG...............26130.08100000001000000000
..........................................................................................................................................................................AC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGCA.............26140.07100000000001000000
.................................................................................................................................................................................................TATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAGCCACT..........26150.07100000000001000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------...................29150.07100000001000000000
...................................................................................................................................................................................................TTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CCAG...............19170.06100000000001000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCT.....................................................................................................................................................................24200.05100000010000000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-A..................................................................................................................................................................26200.05100000000010000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................18200.05100000001000000000
........................................................................................................................................................................TGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-...................................................................................................................................................................20200.05100000000100000000
....................................................................................................................................................................ATAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................17200.05100000000010000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTC......................................................................................................................................................................21200.05100000000100000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GG........................................................................................................................................................................21200.05100000000000010000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCG.....................................................................................................................................................................24200.05100000010000000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................21200.05100000001000000000
.........................................................................................................................................................................GAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-A..................................................................................................................................................................20200.05100000000001000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGG................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CC.................27200.05100000001000000000
...................................................................................................................................................................TATAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------CC.................29200.05100000000001000000
.....................................................................................................................................................................TAGTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCCA-AA----------------------------------------------------------------------------------------------------------------------------------------------A..................26200.05100000001000000000
.......................................................................................................................................................................GTGAC--------------------GTATTTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................18200.05100000000001000000
.................................................................................................................................................................TATATAGTGAC--------------------GTATTTGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................21200.05100000001000000000
droSec2
ATATATATTAAAT---ATA---------------------------------------------------------------------------TATACAAATATATATTAAATAT--------------------------------------------------------------------------------ATATACAAATATATATAAA---TATATATAAATATATATACAAATATATA---------------TATAAATAC-A-------------TATACAAT-----------------------------------------------A-------------------------------------------------------------------TACATAATATATATAATA-----------------T-----------AT-------------------------------AATTAATTATAT------------AAAAA-TAAT---AATAATAATAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTAAACTGCCATA--CAACTATATGT---------------------------------------------------------------------ATG--TAATTATATTAAATATGTATAT------------------------------------GCATATATTACCAA--------------------TTCAATG----------CATATA---TGTATGTACATATATATACACATGTAT-----------------------------------------------T-----------------------------------------------ATTCTTCACTTTTTATTGTACCTTGTTATTAAC-AA----------------------------------------------------------------------------------------------------------------------------------------------TCAA---AAACTTAATTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.TAAACTGCCATA--CAACTATATGT---------------------------------------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.40202000000000
.TAAACTGCCATA--CAACTATATGT---------------------------------------------------------------------ATG--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20101000000000
TTAAACTGCCATA--CAACTATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20101000000000
.TAAACTGCCATA--CAACTATATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20100100000000
TTAAACTGCCATA--CAACTATATGT---------------------------------------------------------------------ATG--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.20101000000000
.................................................................................................................................................................................................TCAATG----------CATATA---TGTATGTACATATATA...............................................................................................................................................................................................................................................................................................................2860.17101000000000
............................................................................................................................................................................................................................TATGTACATATATATACACATGTAT-----------------------------------------------.....................................................................................................................................................................................................................................................2560.17101000000000
..........................................................................................................................................................................................................................................TACACATGTAT-----------------------------------------------T-----------------------------------------------ATTCTTCACTTTT........................................................................................................................................................................................2560.17101000000000
................................................................................................................................................................................................................................TACATATATATACACATGTAT-----------------------------------------------T-----------------------------------------------ATT..................................................................................................................................................................................................2560.17101000000000
droEre2
ATATATATCTATA----------TA---------------------------------------------------------------------TATA--CACATATATA--ATATATATAATATATATATAATTATATATATACATAATATATAAATATATATATAGTAGC--------------------ATATGTACCATAG--TATAA----CACTTTGTCACACACACACACAG-TACATATGTACCACTTGATCA-----------------CACCCAC--------CCAA------TCCATTTACCCCAACACATAAGTCAGAT------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGCGACAATAACAATTTCG----------------------------GCCGCGTTAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGCGACAATAACAAT..........................................27200.3577000000
.................................................................................................................................................................................................................................................................................................................................TAAGTCAGAT------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGCGACA..................................................28200.3066000000
................................................................................................................................................................................................................................................................................................................................ATAAGTCAGAT------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGCGA....................................................27200.1533000000
.................................................................................................................................................................................................................................................................................................................................TAAGTCAGAT------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGC......................................................24200.1022000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACAATAACAATTTCG----------------------------GCCGCG....25200.0511000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTGGCGACAATAACAATTTCG----------------------------GCCG......28200.0511000000
....................................................................................................................................................................................................................................................TATGTACCACTTGATCA-----------------CACCCAC--------CC..................................................................................................................................................................................................................................................26200.0511000000
.....................................................................................................................................................................................................................................................................................................................................TCAGAT------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCTCTTGGCGA....................................................22200.0511000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTCTTGGCGACAATAACAATT.........................................25200.0511000000

Generated: 05/16/2015 at 10:08 PM