dvi_9700

Name	Class	Family	Strand
BEL-1_DPer-I-int	LTR	Pao	+

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GATCTTCTTCGCCCCGTCCGACATCAAAGTTAAGCAATCCTACACAAGACGTAAGGCGCTTTCCCAAATCACCAGGTTGTTAAATCCAGCGGGGTGTTTATCTCCATTCGTGGCCCGTTCTAATATCTTCATGCAAGAAATCTGGTTTTATGATCTGAGTTGGGATGGAAAGAATTCCTCGAGAGCTATGCTACTCTCAACAAAATACTCAACGCCAGATGGGTTCAATTTTCCCCTCAGACAAAAATGCA ************************************************...(((..((((((....((((((((((((.(((.((((((((....................))))........((((.....))))...)))).))))))))))).)).))...))))))....))).(((((........)))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	SRR060687 9_0-2h_embryos_total	SRR060679 140x9_testes_total	GSM1528803 follicle cells	SRR060672 9x160_females_carcasses_total	SRR060655 9x160_testes_total	SRR060671 9x160_males_carcasses_total	V047 embryo
......................................................................................................................................................................................................................................TTCCCCTCAGACAAAAATGCA	21	0	1	1.00	1	1	0	0	0	0	0	0	0
.......................................................................................................................................AGAGATCTGGTTTTATGATCTGAGTTG.........................................................................................	27	1	1	1.00	1	0	1	0	0	0	0	0	0
..............................................................................................................................CTTCATGCAAGAAATCTGGTTGC......................................................................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0
.............................................................................................................................TTTTCATGCAAGAAATCTGGT.........................................................................................................	21	1	2	0.50	1	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................AATTTTCCCCTCGGAC.........	16	1	3	0.33	1	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................TACGCGAGCTGGGTTCAAT......................	19	3	7	0.14	1	0	0	0	0	0	1	0	0
..........................................................CTTGGCCAAATCACCAGCTT.............................................................................................................................................................................	20	3	8	0.13	1	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................TTCAATTTTCTCCTCGGACC........	20	3	8	0.13	1	1	0	0	0	0	0	0	0
..............................................................................................................................................................GTTGTGATGCAAAGAATT...........................................................................	18	2	18	0.06	1	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................AATTTTCTCCTCAGACC........	17	2	20	0.05	1	0	0	0	1	0	0	0	0
............................................CAAAAGGTCAGGCGCTTTC............................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	1	0	0	0
.....................................................................CACCACCTTCTTAAATCCA...................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................................ACAAACTACTCAAGGGCAGA................................	20	3	20	0.05	1	0	0	1	0	0	0	0	0

CTAGAAGAAGCGGGGCAGGCTGTAGTTTCAATTCGTTAGGATGTGTTCTGCATTCCGCGAAAGGGTTTAGTGGTCCAACAATTTAGGTCGCCCCACAAATAGAGGTAAGCACCGGGCAAGATTATAGAAGTACGTTCTTTAGACCAAAATACTAGACTCAACCCTACCTTTCTTAAGGAGCTCTCGATACGATGAGAGTTGTTTTATGAGTTGCGGTCTACCCAAGTTAAAAGGGGAGTCTGTTTTTACGT ************************************************...(((..((((((....((((((((((((.(((.((((((((....................))))........((((.....))))...)))).))))))))))).)).))...))))))....))).(((((........)))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060657 140_testes_total	SRR060675 140x9_ovaries_total	SRR060659 Argentina_testes_total	SRR1106729 mixed whole adult body	SRR060687 9_0-2h_embryos_total	M027 male body	SRR060666 160_males_carcasses_total	SRR060658 140_ovaries_total
.........................................................CGGTAGGGTTTAGTGGTCC...............................................................................................................................................................................	19	2	1	2.00	2	2	0	0	0	0	0	0	0
.........................................................CGGTAGGGTTTAGTGGTC................................................................................................................................................................................	18	2	2	1.50	3	3	0	0	0	0	0	0	0
............................CAATTCGTTAGGATGTGTTCTGCATTC....................................................................................................................................................................................................	27	0	1	1.00	1	0	1	0	0	0	0	0	0
........................................................GCGGTAGGGTTTAGTGGTCCG..............................................................................................................................................................................	21	3	2	0.50	1	0	0	1	0	0	0	0	0
.....................................................TCCGCGAGAGGGTTTA......................................................................................................................................................................................	16	1	4	0.25	1	0	0	0	1	0	0	0	0
.........................................................CGTTAGGGTTTAGTGGTC................................................................................................................................................................................	18	2	6	0.17	1	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................ATGAGTTGTGGTATACCCT...........................	19	3	15	0.13	2	0	1	0	0	0	0	0	1
.............................................................CGGGTTTAGTGGTAGAACAA..........................................................................................................................................................................	20	3	8	0.13	1	0	0	0	0	0	1	0	0
..............................................................GGGTTTAGTGGTAGAACAAC.........................................................................................................................................................................	20	3	13	0.08	1	0	0	0	0	0	0	1	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12958:1076358-1076608 +	dvi_9700	GATCTT-CTTCGCCCCGTCCGACATCAAAGTTAAGCAATCCTACACAAGACGTAAGGCGCTTTCCCAAATCACCAGGTTG--TTAAATCCAGCGGGGTGTTTATCTCCATTCGTGGCCCGTTCTAATATCTTCATGCAAGAAATCTGGTTTTATGATCTGAGTTGGGATG-------------------------------GAAAGAATTCCT-CG-AGAGCTATGCTACTCTCAACAAAATACTCAACGCCAGATGGGTTCAATTTTCCCCTCAGACAAAAATGCA
droMoj3	scaffold_6498:2448676-2448904 -		TATTTT-TTTCGCCCCC--TGACATTCCTCTCCAGGAGTCCTACACAAAAAGGTCGGTCCTTTCACAGATCGCCAAGTTG--TTCGACCCTGCAATGTGGCTGGCACCCTTTGTCATTCGTGCAAAAATATTTATGCAAGCGCTCTGGCTACGCGGTTTAGATTGGGACCAACCTCTGCCTGGTG-----------------------------------------------------ATATTCGTGTGCCTCGCTGGGTACACTTCCAACCTCGAGCCACTATTCA
droGri2	scaffold_13404:5880-6056 -		----------------------------------------------------------------------------------------------GGATGGTTAGCTACAGTGATCGTTCGGGCCAAGATTGTCATGCAGGAAATATGGCTTCATTATCTAAGCTGGAATGATACACTTCCACAAGAGCTACTTCATCGTTGTCACGGCATCC----------------ATACTGAGAGAAATCTGCATATCAAGATAGATAAATTTCGAACCCGCTGCAAGTGTGCA
droWil2	scf2_1100000004962:131078-131326 +		CTTCTT-CTTCACCGTAGCGGACCA----TTGAAGGAGCCGATCTCCAAGAGGCATGTTCTGTCCCATATCACTAAACTC--TTCGACCCCGCTGGCTGGCTAGCCCCATTTGTTATTCGAGCGAAGATATTCATGCAGCAAATCTGGTTAACCGAACTGGGCTGGGATGAC-----------------------------GCTCGAATTCCT-GC-AGGATTACCCAGGCCTCAGTCAACTCCGCATCCCCCATTGGCTAAACACCAGCGATACTCTCTCGTGAGA
dp5	Unknown_group_514:250-530 -		GATTTT--TTTGTCCCTCCCGAGTTAGTACCTGAGTCGTCATACACCAAGCGAGCAGTTCTGTCCCAGATCGCAAGGCTG--TTCGACCCCGCGGGGTGGTTGGCCCCATTCATTGTCCGGCCCAAGATCTTCATGCAAGAAATCTGGTTGCAGGACCTGGGATGGGACGATGAGCTTCCAAGCGAGATGCGCCAGCGCTGGCAAAGTTTCCT-GC-GGAGCTACTCCGCTCTCGACCAAATCCATATTCCAAGATGGGTCGGCTCCCGGCCAGCGGTAAAAGTCGA
droPer2	scaffold_5842:952-1189 -		GTTTTTTTTTCGTCCCTCCCGAGTTAGCGCCTGAGTCGTCATACACCAAGCGAGCAGTTCTGTCCCAGATCGCAAGGCTG--TTCGACCCCGCGGGGTGGTTGGCCCCATTCATTGTCCGGTCCAAGATCTTCATGCAAGAAATCTGGTTGCAGGACCTGGGATGGGACGATGAGCTTCCAAGCGAGATGCACCAGCGCTGGCAAAGTTTTCCTGC-GGAGCTACTCCGCTCTCGACCAAA----------------------------------------------
droAna3	scaffold_13469:614897-615173 +		ATTTTT-CTTCGTCCCGTCCGATATTACTCCAAAGGCAGTCCTCAGTAAACGGGAGGTACTGTCCCAAATTGCAAGACTT--TTTGACCCGGCAGGATGGCTGGCACCTTTCGTGATCCGAGCAAAAATCTTTATGCAGGAGATTTGGCTCCAGCAGCTGGGTTGGGACGATCCACTCCCTGCTGAT-----GGGAAAATGGAACGAATTTCT-TA-TGAGCTTTCCTACTATAAACCAAATCCGAATTCCGAGATGGGTGAAATTTGGTCCACAATCCAAAGTTCA
droBip1	scf7180000393553:655-900 +		ATTCTT-TTTTGTCCCGCCAGAATTGACTTCCGGCTCGGTTTTCACGAATCGTCAAGTCCTCTCCCAAATTGCCAAATTG--TACGATCCAGCAGGTTGGCTCGCTCCTTTCATTGTTCGGGCAAAAATGTTCATGCAAGACATTTGGCTTCTGGATCTAGGGTGGGATGACGCCCTCCCTCAAGATTTCTGTCAGCGATGGGTTGACTTCCT-AA-AGAATTACTCGTT------------------------------------CCGACCACACCTAAAGGTCGA
droKik1	scf7180000297788:503-775 +		GTTCTA-TTTTGTCCCAACAGAGGTCACCATTCAGGCAAACTATTCGAAACGCGATGTCTTATCCCAAATCGCGAAGTTG--TTCGACCCAGCTGGGTGGCTCTCCCCATTTGTGGTTCAGGCCAAAATCCTGATGCAGGATATCTGGTATC--------GAATGGGATGAGTTTCTTCCTGCAGA-CTACTACATCGCTGGCATGATTTCCT-TC-GGAGCTACAGTTTCCTCCACCAAGTTCGCATCCCGCGCTGGGTACATTTTCAACCGGGTGTACAAGTCCA
droFic1	scf7180000453082:10577-10852 +		GTTTTT-CTTCGTTCCCCCAGATCTACCCACAGAAATCTCCCCCACAAAACGCCAGGTGCTTTCCCAAATCGCCAAACTG--TTTGATCCGGCAGGCTGGCTCGCTCCATTTGTTGTGTGTGCCAAGATCTTTATGCAAGAGATTTGGCTTCAGGAGCTGGGGTGGGACGATAAGCTGCCATCTGAGCTGTGCCAAAGGTGGCACAGTTTTCT-TC-AAAGCTATTCGATCCTTGATCAGGTCCGGATTCGAAGATGGGTTTCCTGTCGCCCAGA------ATTTCG
droEle1	scf7180000487556:15176-15414 -		GTTCTT-TTTCCTGCCGAGGGAAATTTCTCTTCAAACAGACT-------ACTAGAGGTTTTATCCCAGATAGCTAAGCTG--TTTGATCCAGCAGGATGGTTATCGCCTTTCGTCATCCGGGCCAAATTTTTCATGCAAGAAATTTGATTGCTGGAGTTAAGCTGG------------------------------------CATGATTTTCT-TA-AAGGGTATCCAGCCCTGAAGAAGATTCGCATTCCAAGATGGGTGCGATTTCTTCCAGCAGCGAAACTGCA
droRho1	scf7180000777424:10577-10830 +		GTTTTT-CTTCGTCCCACTAGCGTTGACAACGGAAATCTCCCCCACAAAACGGCAGGTCGTTTCCCAAATTGCCAAGCTG--TTTGATCCAGCAGGCTGGCTAGCTCCATTTGTTGTATGTGCCAAAATCTTTATGCAAGAGATTTGGTTTCAGGAGCTAGGGTGGGACGATGAACTTGCAACTGAGCTGTGCCAAAGGTGGCGCGACTTTCT-TC-AAAGTTACTCGGTCCTAGATCAGGTCCGAATTCCAAGATGGG----------------------------
droBia1	scf7180000297893:1062-1298 +		GTTCTT-CTTCGTCCCACCAGATCTAGCAACGTAAATCTCCCCCGAGAAACGCGAAGTCCTTTCCCAAATTGTCAAGTTG--TTCGATCTCGCAGGCTGGCTCGCTACATTTGTTGTGTGTTCCAAAATCTTTATGCAAGAGATTTGGCTTTG---------------------------------GCTGTGCCAAAGGTGAAACAGCTTCCT-CC-AGAGCTATTCGGTCCTATACCAGGTCAGAATACCAACATGGGATTTCATTCGTCCAGA------------
droTak1	scf7180000411255:12721-13003 -		GTTTTT-CTTCGCCCCTCCAGACCTATCCAACGAAGCCACGCTCACGAAACGTCATGTTCTTTCCCAAATCGCCAAGCTG--TTTGATCCAGCAGGCTGGCTCGCTCCTTTCGTGGTCTGTGCCAAGATTTTCATGCAGGAGATCTGGCTTCATGATCTTGGGTGGGATGATGAACTCCCAATTGAACTGTGCCAAAAGTGGCGTGATTTTCT-ACAAAAGCTACTCGGTCCTAGATCAAGTCCGAATTCCCAGATGGGTTTCTTTCCGCCCTGAGTTCCGAGTCGA
droEug1	scf7180000408753:1958-2239 +		ATTCTA-CTTCGTGCCGCCAGAAATAGTGGTGGAACCCTCCTTTACAAAGCGGGAGGTGTTGTCCCAAATCGCGAGGTTG--TTTGATCCAGCCGGATGGCTCGCTCCGTTTATAATACGTTCCAAAATGTTTATGCAGGAGATTTGGCTACAAGATTTCAGCTGGGATGATAAGCTTCCCAGCGAAATGAGTCAGAGGTGGCAGGCGTTTCT-TC-ATGAGTATTCCGACCTCAACCAGATCCGCGTCCCGAGATGGGTCTGTTTTCAGCCTGAGATCAAAGTGGC
dm3	chr2R:2331053-2331315 +		ATTCTT-CTTCGTTCCGCCAGAGTTGGCTATCGAAACGTCCTTTACAAAACGCCAAGTCCTGTCCCAAATTGCCAAATTG--TTCGACCCTGCCGGCTGGTTAGCACCGTTTATCGTTCGAGCCAAAATTTTCATGCAGGAGATTTGGCTGCAGGAACTTGGGTGGGACGAAAACATTCCAAATGAGCTTTTTCAGCGATGGCTGAATTTTCT-TC-AAAGTTATTCAGTGTCAGAGCAGATACGCATTCCACGCTGGCTATCGTTTC-------------------
droSim2	node_95717:1624-1877 +		ATTCTT-CTTCGTCCCGCCAGAGTTGGCTATCGAAATGTCCTTTACAAAACGCCAAGTCCTGTTCCAAATTGCCAAATTG--TTCGACCCTGCAGGCTGGTTAGCGCCGTTTATCGTTCGAGCTAAAATTTTCATGCAGGAGATTTGGCTGCAGGAGCTTGGGTGGGACGA----------------------------TGGCTTAATTTTCT-CC-AAAGTTATTCGGTTTTAGAGCAGATACGCATTCCACGCTGGCTATCGTTTCGTCCAGATTTCAAGGTCGA
droSec2	scaffold_96:1947-2188 +		ATTCTT-CTTCGTCCCGCCAGAGTTGGCTATCGAAACGTCCTTTACAAAACGCCAAGTCCTGTCCCAAATTGCCAAATTG--TTCGACCCTGCAGGCTGGTTAGCGCCGTTTATCGTTCGAGCTAAAATTTTCATGCAGGAGATTTGGCTGCAGGAGCTTGGGTGGGACGAAAACATTCCAAATGAGCTTTTTCAGCGATGGCTTAATTTTCT-CC-AAAGTTATTCAGTTTTAGAGCAGATACGCA----------------------------------------
droYak3	v2_chrUn_003:65997-66257 +		GTTTTT-CTTCACTCCTGCAGAATTGACCTCGGGGTCGTCGTTCTCAAAGCGTCAAGTCCTTTCCCAAATTGCCAAGCTA--TTCGATCCAGCCGGCTGTCTAGCCCCCTTCATTGTCCGGACAAAGATGTTTATGCAGGACATTTGGCTTAAGGATCTAGGCTGGG-CGATGTCCTCCCTCAAGAATTCTGCAAGAGATGAATTGACTTCCG-GG-AAAATTACTCGGCGCTCGATCAGATCCACTTTCCCA--------------------CACTTGAAAATAGA
droEre2	scaffold_4744:4528-4758 -		ATTCTA-TTTCGTCCCTCCTGAAAAAGCTTTGGAACCCCCA------------AATTTTTTGTCCCAAATCTCCGGGTTTCTTTCGATCCTGCCGGGTTGCTCGCTCTGTTCATCATCCGTTCCAAAATGTTCATGCAGGAGATTTGGTTGCGGGACTTAGGCTGGGACAT----------------------------------TCGTTCAT-AG-ATGACTATTCCGGCCTCAACCAGATCCGTGTTCCGAGATGGGTCTGGTATCAGCCTGAAGA-------AA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

GATCTT-CTTCGCCCCGTCCGACATCAAAGTTAAGCAATCCTACACAAGACGTAAGGCGCTTTCCCAAATCACCAGGTTG--TTAAATCCAGCGGGGTGTTTATCTCCATTCGTGGCCCGTTCTAATATCTTCATGCAAGAAATCTGGTTTTATGATCTGAGTTGGGATG-------------------------------GAAAGAATTCCT-CG-AGAGCTATGCTACTCTCAACAAAATACTCAACGCCAGATGGGTTCAATTTTCCCCTCAGACAAAAATGCA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..........................................................................................................................................................................................................................................................................TTCCCCTCAGACAAAAATGCA	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGC.......................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TATTTT-TTTCGCCCCC--TGACATTCCTCTCCAGGAGTCCTACACAAAAAGGTCGGTCCTTTCACAGATCGCCAAGTTG--TTCGACCCTGCAATGTGGCTGGCACCCTTTGTCATTCGTGCAAAAATATTTATGCAAGCGCTCTGGCTACGCGGTTTAGATTGGGACCAACCTCTGCCTGGTG-----------------------------------------------------ATATTCGTGTGCCTCGCTGGGTACACTTCCAACCTCGAGCCACTATTCA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACGCGG...................................................................................................................................	28	4	4.75	19	19	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTAC.......................................................................................................................................	24	8	4.63	37	33	1	0	0	3	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACGC.....................................................................................................................................	26	6	2.67	16	9	0	0	0	7	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCT.........................................................................................................................................	22	9	2.44	22	11	0	0	0	11	0
................................................................................................................................TATTTATGCAAGCGCTCTGGC..........................................................................................................................................	21	9	2.22	20	13	0	0	0	4	3
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCC...........................................................................................................	22	13	1.77	23	15	0	0	0	8	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCT..........................................................................................................	23	11	1.73	19	14	0	0	0	5	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACGCG....................................................................................................................................	27	6	1.50	9	9	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACG......................................................................................................................................	25	8	1.38	11	11	0	0	0	0	0
......................................TCCTACACAAAAAGGTCGGTCCTTT................................................................................................................................................................................................................................	25	6	1.33	8	3	0	0	0	5	0
......................................TCCTACACAAAAAGGTCGGTCCTTTCAC.............................................................................................................................................................................................................................	28	3	1.00	3	3	0	0	0	0	0
......................................TCCTACACAAAAAGGTCGGTCC...................................................................................................................................................................................................................................	22	6	1.00	6	5	0	0	0	1	0
......................................TCCTACACAAAAAGGTCGGTCCTT.................................................................................................................................................................................................................................	24	6	1.00	6	4	0	0	0	2	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTG.........................................................................................................	24	11	0.91	10	9	0	0	0	1	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTGG........................................................................................................	25	11	0.82	9	3	4	0	0	1	1
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTGGTG-----------------------------------------------------A................................................	28	11	0.73	8	7	0	0	0	1	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTGGTG-----------------------------------------------------.................................................	27	11	0.73	8	7	0	0	0	1	0
.................................................................................................................................ATTTATGCAAGCGCTCTGGCTACGC.....................................................................................................................................	25	6	0.67	4	4	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGG...........................................................................................................................................	20	9	0.67	6	6	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTA........................................................................................................................................	23	9	0.56	5	4	0	0	0	1	0
............................................................................................................................................................TTTAGATTGGGACCAACCTCTGCC...........................................................................................................	24	13	0.54	7	3	0	0	0	4	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGC............................................................................................................	21	13	0.54	7	5	0	0	0	2	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACGCGGT..................................................................................................................................	29	4	0.50	2	2	0	0	0	0	0
......................................TCCTACACAAAAAGGTCGGTCCTTTC...............................................................................................................................................................................................................................	26	6	0.50	3	2	0	0	0	1	0
.................................................................................................................................ATTTATGCAAGCGCTCTGGCTACGCGG...................................................................................................................................	27	4	0.50	2	2	0	0	0	0	0
......................................TCCTACACAAAAAGGTCGGTCCT..................................................................................................................................................................................................................................	23	6	0.50	3	1	0	0	0	2	0
............................................................................................................................................................TTTAGATTGGGACCAACCTCTGCCTGG........................................................................................................	27	11	0.45	5	2	0	0	0	2	1
.................................................................................................................................ATTTATGCAAGCGCTCTGGCTAC.......................................................................................................................................	23	8	0.38	3	3	0	0	0	0	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTGGT.......................................................................................................	26	11	0.36	4	2	0	0	0	2	0
......................................TCCTACACAAAAAGGTCGGTCCTTTCA..............................................................................................................................................................................................................................	27	3	0.33	1	1	0	0	0	0	0
......................................TCCTACACAAAAAGGTCGGTCCTTC................................................................................................................................................................................................................................	25	6	0.33	2	1	0	0	0	1	0
.................................................................................................................................ATTTATGCAAGCGCTCTGGCTACGCG....................................................................................................................................	26	6	0.33	2	2	0	0	0	0	0
.............................................................................................................................................................TTAGATTGGGACCAACCTCTGC............................................................................................................	22	13	0.31	4	4	0	0	0	0	0
.............................................................................................................................................................TTAGATTGGGACCAACCTCTGCCTGG........................................................................................................	26	11	0.27	3	2	0	0	0	1	0
...............CC--TGACATTCCTCTCCAGGAGTCCT.....................................................................................................................................................................................................................................................	25	8	0.25	2	0	0	0	0	2	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACGCGGC..................................................................................................................................	29	4	0.25	1	0	0	0	0	1	0
......................................................CGGTCCTTTCACAGATCGCC.....................................................................................................................................................................................................................	20	8	0.25	2	2	0	0	0	0	0
.................................................................................................................................ATTTATGCAAGCGCTCTGG...........................................................................................................................................	19	9	0.22	2	2	0	0	0	0	0
.......................................CCTACACAAAAAGGTCGGTCCTTTCACA............................................................................................................................................................................................................................	28	5	0.20	1	1	0	0	0	0	0
............CCCCC--TGACATTCCTCTCCAGGAGTCC......................................................................................................................................................................................................................................................	27	5	0.20	1	1	0	0	0	0	0
.................................AGGAGTCCTACACAAAAAGGTCGG......................................................................................................................................................................................................................................	24	5	0.20	1	1	0	0	0	0	0
........................................CTACACAAAAAGGTCGGTCCTTTCACC............................................................................................................................................................................................................................	27	5	0.20	1	1	0	0	0	0	0
..............CCC--TGACATTCCTCTCCAGGAGT........................................................................................................................................................................................................................................................	23	5	0.20	1	0	0	0	0	1	0
..............CCC--TGACATTCCTCTCCAGGAGTCC......................................................................................................................................................................................................................................................	25	5	0.20	1	1	0	0	0	0	0
.................................AGGAGTCCTACACAAAAAGGTCGGTCC...................................................................................................................................................................................................................................	27	5	0.20	1	1	0	0	0	0	0
......................................TCCTACACAAAAAGGTCGGTCCTTG................................................................................................................................................................................................................................	25	6	0.17	1	1	0	0	0	0	0
...................................................................................................................................TTATGCAAGCGCTCTGGCTACGCGG...................................................................................................................................	25	6	0.17	1	1	0	0	0	0	0
..................................................................................................................................TTTATGCAAGCGCTCTGGCTACGCGG...................................................................................................................................	26	6	0.17	1	1	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACGCGCC..................................................................................................................................	29	6	0.17	1	1	0	0	0	0	0
.....................................GTCCTACACAAAAAGGTCGGTCC...................................................................................................................................................................................................................................	23	6	0.17	1	1	0	0	0	0	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCC..........................................................................................................	23	13	0.15	2	0	0	0	0	2	0
......................................................................................................................................TGCAAGCGCTCTGGCTACGCGGTT.................................................................................................................................	24	7	0.14	1	1	0	0	0	0	0
...........................CTCTCCAGGAGTCCTACACAAAAAAA..........................................................................................................................................................................................................................................	26	7	0.14	1	1	0	0	0	0	0
..............................TCCAGGAGTCCTACACAAAAAGGTC........................................................................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	1	0
...............................................................................................................................ATATTTATGCAAGCGCTCTGGCTAC.......................................................................................................................................	25	8	0.13	1	1	0	0	0	0	0
........................................CTACACAAAAAGGTCGGTCCTTT................................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACT......................................................................................................................................	25	8	0.13	1	1	0	0	0	0	0
............................................................................................................................................CGCTCTGGCTACGCGGTT.................................................................................................................................	18	8	0.13	1	1	0	0	0	0	0
...............CC--TGACATTCCTCTCCAGGAGT........................................................................................................................................................................................................................................................	22	8	0.13	1	0	0	0	0	1	0
...............CC--TGACATTCCTCTCCAGGAGTCC......................................................................................................................................................................................................................................................	24	8	0.13	1	0	0	0	0	1	0
.......................................CCTACACAAAAAGGTCGGTCCT..................................................................................................................................................................................................................................	22	8	0.13	1	1	0	0	0	0	0
....................................................................................................................................................CTACGCGGTTTAGATTGGGAC......................................................................................................................	21	8	0.13	1	1	0	0	0	0	0
.......................................CCTACACAAAAAGGTCGGTCCTTT................................................................................................................................................................................................................................	24	8	0.13	1	1	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCTACA......................................................................................................................................	25	8	0.13	1	1	0	0	0	0	0
....................................................................................................................................................CTACGCGGTTTAGATTGGGA.......................................................................................................................	20	8	0.13	1	0	0	0	0	1	0
........................................................................................................................................................GCGGTTTAGATTGGGACCAA...................................................................................................................	20	8	0.13	1	1	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTGGCA.........................................................................................................................................	22	9	0.11	1	1	0	0	0	0	0
.................................................................................................................................ATTTATGCAAGCGCTCTGGCTA........................................................................................................................................	22	9	0.11	1	1	0	0	0	0	0
....................................................................................................................................TATGCAAGCGCTCTGGCTACGC.....................................................................................................................................	22	9	0.11	1	1	0	0	0	0	0
.................................................................................................................................ATTTATGCAAGCGCTCTGGCT.........................................................................................................................................	21	9	0.11	1	1	0	0	0	0	0
.........................................................TCCTTTCACAGATCGCCAAGTTG--TT...........................................................................................................................................................................................................	25	10	0.10	1	0	0	0	0	1	0
........................................................................CCAAGTTG--TTCGACCCTGC..................................................................................................................................................................................................	19	10	0.10	1	0	0	0	0	1	0
.........................................................................CAAGTTG--TTCGACCCTGC..................................................................................................................................................................................................	18	10	0.10	1	1	0	0	0	0	0
................................................................................................................................TATTTATGCAAGCGCTCTG............................................................................................................................................	19	10	0.10	1	1	0	0	0	0	0
.............................................................TTCACAGATCGCCAAGTTG--TTCGACCC.....................................................................................................................................................................................................	27	10	0.10	1	0	0	0	0	1	0
.............................................................................................................................................................TTAGATTGGGACCAACCTCTGCCT..........................................................................................................	24	11	0.09	1	0	0	0	0	1	0
................................................................ACAGATCGCCAAGTTG--TTCGA........................................................................................................................................................................................................	21	11	0.09	1	0	0	0	0	0	1
.............................................................................................................................................................TTAGATTGGGACCAACCTCTGCCTG.........................................................................................................	25	11	0.09	1	1	0	0	0	0	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTGGC.......................................................................................................	26	11	0.09	1	0	0	0	0	1	0
...............................................................................................................................................................AGATTGGGACCAACCTCTGCCTGG........................................................................................................	24	11	0.09	1	1	0	0	0	0	0
..............................................................TCACAGATCGCCAAGTTG--TTCGACCC.....................................................................................................................................................................................................	26	11	0.09	1	1	0	0	0	0	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCTA.........................................................................................................	24	11	0.09	1	0	0	0	0	1	0
....................................................................................................................................TATGCAAGCGCTCTGGCTAC.......................................................................................................................................	20	11	0.09	1	1	0	0	0	0	0
............................................................................................................................................................TTTAGATTGGGACCAACCTCTGCCTG.........................................................................................................	26	11	0.09	1	1	0	0	0	0	0
............................................................................................................................................................TTTAGATTGGGACCAACCTCTGCCT..........................................................................................................	25	11	0.09	1	1	0	0	0	0	0
.............................................................................................................................................................TTAGATTGGGACCAACCTCTGCC...........................................................................................................	23	13	0.08	1	0	0	0	0	1	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTG.............................................................................................................	20	13	0.08	1	1	0	0	0	0	0
............................................................................................................................................................TTTAGATTGGGACCAACCTCTGC............................................................................................................	23	13	0.08	1	1	0	0	0	0	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCA...........................................................................................................	22	13	0.08	1	0	0	0	0	1	0
............................................................................................................................................................TTTAGATTGGGACCAACCTCTGCCA..........................................................................................................	25	13	0.08	1	1	0	0	0	0	0
..............................................................................................................................................................TAGATTGGGACCAACCTCTGCCA..........................................................................................................	23	14	0.07	1	1	0	0	0	0	0

droGri2

----------------------------------------------------------------------------------------------GGATGGTTAGCTACAGTGATCGTTCGGGCCAAGATTGTCATGCAGGAAATATGGCTTCATTATCTAAGCTGGAATGATACACTTCCACAAGAGCTACTTCATCGTTGTCACGGCATCC----------------ATACTGAGAGAAATCTGCATATCAAGATAGATAAATTTCGAACCCGCTGCAAGTGTGCA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

CTTCTT-CTTCACCGTAGCGGACCA----TTGAAGGAGCCGATCTCCAAGAGGCATGTTCTGTCCCATATCACTAAACTC--TTCGACCCCGCTGGCTGGCTAGCCCCATTTGTTATTCGAGCGAAGATATTCATGCAGCAAATCTGGTTAACCGAACTGGGCTGGGATGAC-----------------------------GCTCGAATTCCT-GC-AGGATTACCCAGGCCTCAGTCAACTCCGCATCCCCCATTGGCTAAACACCAGCGATACTCTCTCGTGAGA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................CATATCACTAAACTC--TTCGACCCCG...................................................................................................................................................................................................	25	2	2.00	4	0	4	0	0	0
.................................................................CATATCACTAAACTC--TTCGACCCCGC..................................................................................................................................................................................................	26	2	1.50	3	0	3	0	0	0
........................................................................................................................................................................TGAC-----------------------------GCTCGAATTCCT-GC-AGGATT................................................................	24	2	1.00	2	0	0	0	2	0
...................................................................................................................................................................TGGGATGAC-----------------------------GCTCGAATTCCT-G........................................................................	22	2	1.00	2	0	2	0	0	0
............................................................................................................................AAGATATTCATGCAGCAAATCTGGT..........................................................................................................................................	25	6	0.83	5	0	4	0	1	0
...................................................................................................................................TCATGCAGCAAATCTGGTTAACCGAAC.................................................................................................................................	27	10	0.60	6	0	0	0	6	0
.....................................................................................................................................................TAACCGAACTGGGCTGGGATGAC-----------------------------GC....................................................................................	25	9	0.56	5	0	2	0	3	0
.........................................................................................................................................................................................................................................................................CCAGCGATACTCTCTCGTGAGA	22	2	0.50	1	0	1	0	0	0
.................................................................CATATCACTAAACTC--TTCGACCCCGCT.................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
........................................................................................................................................................................................................................................TCAGTCAACTCCGCATCCCCCATTGGC............................	27	2	0.50	1	0	1	0	0	0
..........................................................................................................................................................GAACTGGGCTGGGATGAC-----------------------------GCTCGAATC.............................................................................	27	2	0.50	1	0	1	0	0	0
............CCGTAGCGGACCA----TTGAAGGAGCCG......................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	1	0
...................................................................................................................................................................TGGGATGAC-----------------------------GCTCGAATTCCT-GC-......................................................................	23	2	0.50	1	0	0	0	1	0
...........................................................CTGTCCCATATCACTAAACTC--TTCGAC.......................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
.TTCTT-CTTCACCGTAGCGGACCA----T.................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	1	0	0
..........CACCGTAGCGGACCA----TTGAAGGAG.........................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
...........................................................................................................................................................................................................................................GTCAACTCCGCATCCCCCATTGGC............................	24	2	0.50	1	0	1	0	0	0
........................................................................................................................................................................TGAC-----------------------------GCTCGAATTCCT-GC-AGGAT.................................................................	23	2	0.50	1	0	0	0	1	0
.................................................................CATATCACTAAACTC--TTCGACCCCGT..................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0
...............................................................CCCATATCACTAAACTC--TTCGACCC.....................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0
...........ACCGTAGCGGACCA----TTGAAGGAGCCG......................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................CTAAACACCAGCGATACTCTCTCGTGAG.	28	2	0.50	1	0	1	0	0	0
............CCGTAGCGGACCA----TTGAAGGAGCCGA.....................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0
...................................................................................................................................................................TGGGATGAC-----------------------------GCTCGAATTCCT-GC-AGGA..................................................................	27	2	0.50	1	0	0	0	1	0
..............................TGAAGGAGCCGATCTCCAAGAGGCATT......................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	1	0
.................................................................CATATCACTAAACTC--TTCGACCC.....................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0
..............................................................................................................................................................TGGGCTGGGATGAC-----------------------------GCTCGAATTCCT-G........................................................................	27	2	0.50	1	0	1	0	0	0
.................................................................CATATCACTAAACTC--TTCGACC......................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0
............................................................................................................................AAGATATTCATGCAGCAAATCTGG...........................................................................................................................................	24	20	0.35	7	0	6	0	1	0
........TTCACCGTAGCGGACCA----TTGAA.............................................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................GCTAAACACCAGCGATACTCTCTCG.....	25	6	0.33	2	0	2	0	0	0
............CCGTAGCGGACCA----TTGAAA............................................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0
.............................................................................................TGGCTGGCTAGCCCCATTTGTTATTCG.......................................................................................................................................................................	27	4	0.25	1	0	1	0	0	0
.............................................................................................TGGCTGGCTAGCCCCATTTGTTATTCGA......................................................................................................................................................................	28	4	0.25	1	0	1	0	0	0
...........................................................................................................CATTTGTTATTCGAGCGAAGATAT............................................................................................................................................................	24	8	0.25	2	0	2	0	0	0
.....................................................................................................................................................TAACCGAACTGGGCTGGGATGAC-----------------------------GCT...................................................................................	26	9	0.22	2	0	2	0	0	0
.....................................................................................................................................................TAACCGAACTGGGCTGGGATGAC-----------------------------GCTC..................................................................................	27	9	0.22	2	1	1	0	0	0
...................................................................................................................................TCATGCAGCAAATCTGGTTAACCGA...................................................................................................................................	25	10	0.20	2	0	1	0	1	0
..............................................................................................................................................................................................................AATTCCT-GC-AGGATTACCCAGG.........................................................	22	20	0.20	4	0	4	0	0	0
...................................................................................................................................TCATGCAGCAAATCTGGTTAACCG....................................................................................................................................	24	10	0.20	2	0	0	0	2	0
.....................................................................................................TAGCCCCATTTGTTATTCGAGCG...................................................................................................................................................................	23	6	0.17	1	0	1	0	0	0
.............................................................................................................................AGATATTCATGCAGCAAATCTGGT..........................................................................................................................................	24	6	0.17	1	0	1	0	0	0
.................................................................................................................................................TGGTTAACCGAACTGGGCTGGGATGA....................................................................................................................	26	6	0.17	1	0	0	0	1	0
.TTCTT-CTTCACCGTAGCGGACC.......................................................................................................................................................................................................................................................................	22	20	0.15	3	0	3	0	0	0
...............................................................................................................................................................................................................................................................TGGCTAAACACCAGCGATACTCTCT.......	25	7	0.14	1	0	1	0	0	0
.................................................................................................TGGCTAGCCCCATTTGTTATTCGAGCGTT.................................................................................................................................................................	29	7	0.14	1	0	1	0	0	0
................................................................................................................................TATTCATGCAGCAAATCTGGT..........................................................................................................................................	21	7	0.14	1	0	1	0	0	0
..............................................................................................................................................................................................................................TACCCAGGCCTCAGTCAACTCCGC.........................................	24	16	0.13	2	0	2	0	0	0
...............................................................................................................................................................................................................................................................TGGCTAAACACCAGCGATACTCT.........	23	8	0.13	1	0	1	0	0	0
......................................................................................................................................................AACCGAACTGGGCTGGGATGAC-----------------------------GC....................................................................................	24	9	0.11	1	0	0	0	1	0
......................................................................................................................................................................................................................................CCTCAGTCAACTCCGCATCCCCC..................................	23	18	0.11	2	0	2	0	0	0
........................................................................................................................................................CCGAACTGGGCTGGGATGAC-----------------------------GCT...................................................................................	23	10	0.10	1	0	1	0	0	0
....................................................................................................................................CATGCAGCAAATCTGGTTAACCGAACT................................................................................................................................	27	10	0.10	1	0	1	0	0	0
.....................................................................................................................................................TAACCGAACTGGGCTGGGATGAC-----------------------------......................................................................................	23	10	0.10	1	0	0	0	1	0
.....................................................................................................................................................TAACCGAACTGGGCTGGGATGAC-----------------------------G.....................................................................................	24	10	0.10	1	0	1	0	0	0
...................................................................................................................................TCATGCAGCAAATCTGGTTAACCGAA..................................................................................................................................	26	10	0.10	1	0	1	0	0	0
........................................................................................................................................................CCGAACTGGGCTGGGATGAC-----------------------------GCTC..................................................................................	24	10	0.10	1	0	1	0	0	0
......................................................................................................................................................AACCGAACTGGGCTGGGATGAC-----------------------------T.....................................................................................	23	11	0.09	1	0	0	0	1	0
...................................................................................................................................TCATGCAGCAAATCTGGTTAACCGAT..................................................................................................................................	26	11	0.09	1	0	0	0	1	0
.....................................................................................................................................ATGCAGCAAATCTGGTTAACCGAACC................................................................................................................................	26	12	0.08	1	0	0	0	1	0
......................................................................................................................................TGCAGCAAATCTGGTTAACCGAACT................................................................................................................................	25	13	0.08	1	0	1	0	0	0
.................................................................................................................................................................................................................................CCAGGCCTCAGTCAACTCCGCATCC.....................................	25	16	0.06	1	0	1	0	0	0
.........................................................................TAAACTC--TTCGACCCCGCTGGCTGGC..........................................................................................................................................................................................	26	17	0.06	1	0	0	0	1	0
...................................................................................TCGACCCCGCTGGCTGGCTAGCCCCAT.................................................................................................................................................................................	27	17	0.06	1	0	1	0	0	0
...............................................................................................................................................................................................................................ACCCAGGCCTCAGTCAACTCCGCA........................................	24	17	0.06	1	0	1	0	0	0
.........................................................................TAAACTC--TTCGACCCCGCTGGCTGG...........................................................................................................................................................................................	25	17	0.06	1	0	1	0	0	0
.....................................................................................................................................................................................................................................GCCTCAGTCAACTCCGCATCCCCC..................................	24	18	0.06	1	0	1	0	0	0
......................................................................................................................................................................................................................................CCTCAGTCAACTCCGCATCCCC...................................	22	18	0.06	1	0	1	0	0	0
.....................................................................................................................................................................................................................................GCCTCAGTCAACTCCGCATCCC....................................	22	18	0.06	1	0	1	0	0	0
.......................................................................................................................................................................................................................................CTCAGTCAACTCCGCATCCC....................................	20	19	0.05	1	0	1	0	0	0
..........................................................................AAACTC--TTCGACCCCGCTGGCT.............................................................................................................................................................................................	22	20	0.05	1	0	0	0	1	0
......................................................................................................................................................AACCGAACTGGGCTGGGATGA....................................................................................................................	21	20	0.05	1	0	0	0	1	0
......................................................................................................................................................................................................................................CCTCAGTCAACTCCGCATCC.....................................	20	20	0.05	1	0	0	0	1	0
...........................................................................AACTC--TTCGACCCCGCTGGCTGG...........................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................................................................................CCAGGCCTCAGTCAACTCCGCAT.......................................	23	20	0.05	1	0	1	0	0	0
..........................................................................................CGCTGGCTGGCTAGCCCCATTTGT.............................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................TAACCGAACTGGGCTGGGA.......................................................................................................................	19	20	0.05	1	0	1	0	0	0
............................................................................................................................AAGATATTCATGCAGCAAATCTG............................................................................................................................................	23	20	0.05	1	0	1	0	0	0
..........................................................................AAACTC--TTCGACCCCGCTGGCTGGCT.........................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0
.......................................................................................................................................................................................................................C-AGGATTACCCAGGCCTCAGT..................................................	21	20	0.05	1	0	1	0	0	0
..........................................................................AAACTC--TTCGACCCCGCTGGCTGG...........................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
...........................................................................AACTC--TTCGACCCCGCTGGCTGGCT.........................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0

dp5

GATTTT--TTTGTCCCTCCCGAGTTAGTACCTGAGTCGTCATACACCAAGCGAGCAGTTCTGTCCCAGATCGCAAGGCTG--TTCGACCCCGCGGGGTGGTTGGCCCCATTCATTGTCCGGCCCAAGATCTTCATGCAAGAAATCTGGTTGCAGGACCTGGGATGGGACGATGAGCTTCCAAGCGAGATGCGCCAGCGCTGGCAAAGTTTCCT-GC-GGAGCTACTCCGCTCTCGACCAAATCCATATTCCAAGATGGGTCGGCTCCCGGCCAGCGGTAAAAGTCGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGC.......................................................................................................................................	23	11	19.45	214	0	177	6	2	8	0	0	19	2	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	23	12	18.50	222	1	220	0	0	0	0	1	0	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGCGAGA...................................................................................................	25	11	17.27	190	0	62	0	0	0	0	3	58	67	0
......................................................CAGTTCTGTCCCAGATCGCAAGGC.................................................................................................................................................................................................................	24	11	17.18	189	0	184	2	0	1	1	1	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGG..................................................................................................................................................................................................................	23	13	14.15	184	0	184	0	0	0	0	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--TT...........................................................................................................................................................................................................	25	12	13.17	158	0	152	1	0	0	0	3	2	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTC.....................	21	14	11.29	158	0	146	6	0	4	0	2	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--T............................................................................................................................................................................................................	24	12	10.67	128	0	119	1	0	2	0	6	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGG.................	25	14	10.07	141	0	135	0	0	0	0	4	2	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTG........................................................................................................................................	22	11	9.82	108	0	100	2	0	0	0	3	1	2	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGCCAG...........................................................................................	24	9	9.33	84	0	84	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATGCGC..............................................................................................	24	9	7.56	68	0	26	5	0	1	0	4	24	8	0
.........................................................TTCTGTCCCAGATCGCAAGGCT................................................................................................................................................................................................................	22	12	6.92	83	0	74	0	0	1	0	7	1	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCC....................	22	14	6.14	86	0	79	4	0	1	0	2	0	0	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATGCGCC.............................................................................................	25	9	5.44	49	0	39	2	0	1	0	1	1	5	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGGC................	26	14	5.21	73	0	72	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCG..................	24	14	4.93	69	0	62	1	0	0	0	3	3	0	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATGC................................................................................................	22	9	4.56	41	0	14	3	0	7	1	0	10	6	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCT......................	20	14	4.21	59	1	52	5	0	0	0	1	0	0	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATGCG...............................................................................................	23	9	3.89	35	0	19	0	0	1	0	1	13	1	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATGCGCCAG...........................................................................................	27	8	3.88	31	0	21	0	0	0	0	0	10	0	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGCCAGC..........................................................................................	25	8	3.88	31	0	29	2	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCA......................................................................................................................................	24	11	3.36	37	0	36	0	0	0	0	0	1	0	0
......................................................CAGTTCTGTCCCAGATCGCAAG...................................................................................................................................................................................................................	22	13	3.15	41	0	41	0	0	0	0	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--TTC..........................................................................................................................................................................................................	26	12	2.92	35	0	35	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGCGAG....................................................................................................	24	11	2.82	31	0	11	0	0	1	0	0	8	11	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCAG.....................................................................................................................................	25	11	2.64	29	0	21	1	0	0	0	0	7	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGCGAGATG.................................................................................................	27	11	2.64	29	0	1	0	0	0	0	0	20	8	0
......................................................CAGTTCTGTCCCAGATCGCAAGGCT................................................................................................................................................................................................................	25	11	2.45	27	0	26	0	0	0	0	1	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	26	11	2.45	27	0	26	0	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCC...................	23	14	2.43	34	0	33	1	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTCCC.............................................................................................................................................................................................................................	23	8	2.38	19	0	19	0	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAGCAGT.....................................................................................................................................................................................................................................	23	6	2.33	14	0	1	0	0	0	0	0	9	4	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGCCAGCGC........................................................................................	27	8	2.25	18	0	18	0	0	0	0	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGC.................................................................................................................................................................................................................	21	12	2.25	27	0	22	1	0	1	0	3	0	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGCCAG...........................................................................................	25	9	2.22	20	0	20	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCAGG....................................................................................................................................	26	11	2.09	23	0	21	0	0	0	0	0	1	1	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGCC.............................................................................................	22	10	2.00	20	0	20	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGC.......................	19	14	2.00	28	0	25	3	0	0	0	0	0	0	0
.......................................................AGTTCTGTCCCAGATCGCAAGGC.................................................................................................................................................................................................................	23	11	1.82	20	0	20	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATGCGCCA............................................................................................	26	8	1.75	14	0	13	0	0	0	0	0	1	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGCC.............................................................................................	23	10	1.60	16	0	14	2	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTCC..............................................................................................................................................................................................................................	22	8	1.50	12	0	11	0	0	0	0	1	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCAGGA...................................................................................................................................	27	11	1.45	16	0	16	0	0	0	0	0	0	0	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGC..............................................................................................	21	10	1.40	14	0	10	0	0	2	0	2	0	0	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGCCAGCG.........................................................................................	26	8	1.38	11	0	11	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTT.........................................................................................................................................	21	11	1.36	15	0	15	0	0	0	0	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGC.......................................................................................................................................	22	12	1.25	15	0	15	0	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTCCCAG...........................................................................................................................................................................................................................	25	8	1.25	10	0	9	0	0	0	0	1	0	0	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCGCCA............................................................................................	23	9	1.22	11	0	11	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TCCT-GC-GGAGCTACTCCGCTCTCGACC.................................................	27	5	1.20	6	0	6	0	0	0	0	0	0	0	0
....................................................................................................................................................................GGGACGATGAGCTTCCAAGCGAGA...................................................................................................	24	11	1.18	13	0	10	0	0	0	0	0	0	3	0
...................................TCGTCATACACCAAGCGAGCAG......................................................................................................................................................................................................................................	22	6	1.17	7	0	1	0	0	0	0	0	5	1	0
.......................................................AGTTCTGTCCCAGATCGCAAGG..................................................................................................................................................................................................................	22	13	1.15	15	0	15	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGCGAGAA..................................................................................................	26	11	1.09	12	1	7	1	0	0	0	0	1	2	0
..........................................................TCTGTCCCAGATCGCAAGGCTG--TT...........................................................................................................................................................................................................	24	12	1.08	13	0	13	0	0	0	0	0	0	0	0
..........................................................TCTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	22	12	1.08	13	0	13	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGT.................	25	14	1.07	15	0	11	1	0	1	0	2	0	0	0
............................................................................................................................................................................................TGCGCCAGCGCTGGCAAAGTTTCCT-GC-......................................................................	27	8	1.00	8	0	7	0	0	0	0	1	0	0	0
................TCCCGAGTTAGTACCTGAGTCG.........................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....TT--TTTGTCCCTCCCGAGTTAGTACC................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTA.....................	21	14	0.93	13	0	13	0	0	0	0	0	0	0	0
..........................................................TCTGTCCCAGATCGCAAGGCTG--T............................................................................................................................................................................................................	23	12	0.92	11	0	11	0	0	0	0	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAGGACC.................................................................................................................................	28	12	0.92	11	1	10	0	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTC...............................................................................................................................................................................................................................	21	8	0.88	7	0	7	0	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTCCCA............................................................................................................................................................................................................................	24	8	0.88	7	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTT.....................	21	14	0.86	12	0	12	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGG........................	18	14	0.86	12	0	9	2	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGGCCA..............	28	14	0.86	12	0	12	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCAGGAC..................................................................................................................................	28	11	0.82	9	0	9	0	0	0	0	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGG..................................................................................................................................................................................................................	20	14	0.79	11	0	9	0	0	0	0	2	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAGCTACTC............................................................	26	9	0.78	7	0	6	0	0	1	0	0	0	0	0
................................................................CCAGATCGCAAGGCTG--TTCGACCCCGC..................................................................................................................................................................................................	27	12	0.75	9	0	0	0	0	0	0	0	8	1	0
.......................................................AGTTCTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	25	11	0.73	8	0	8	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGGCC...............	27	14	0.71	10	0	10	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAGCTACT.............................................................	25	9	0.67	6	0	4	2	0	0	0	0	0	0	0
.............................................................................................................................................................................AGCTTCCAAGCGAGATGCGCCAG...........................................................................................	23	9	0.67	6	0	6	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGCCA............................................................................................	24	9	0.67	6	0	6	0	0	0	0	0	0	0	0
..........................................................TCTGTCCCAGATCGCAAGGCTG--TTC..........................................................................................................................................................................................................	25	12	0.67	8	0	7	0	0	0	0	0	0	1	0
.......................................................AGTTCTGTCCCAGATCGCAAGGCT................................................................................................................................................................................................................	24	11	0.64	7	0	7	0	0	0	0	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGGCTG--T............................................................................................................................................................................................................	27	11	0.64	7	0	7	0	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTCCCAGA..........................................................................................................................................................................................................................	26	8	0.63	5	0	5	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGC..............................................................................................	22	10	0.60	6	0	6	0	0	0	0	0	0	0	0
..........................................................TCTGTCCCAGATCGCAAGGCT................................................................................................................................................................................................................	21	12	0.58	7	0	7	0	0	0	0	0	0	0	0
......................................................................................................................................TGCAAGAAATCTGGTTGCAGGACC.................................................................................................................................	24	12	0.58	7	0	4	1	0	0	0	0	0	2	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTG........................................................................................................................................	21	12	0.58	7	0	7	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCTC.....................	20	14	0.57	8	0	8	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTCCAAGCGAGATGCGCCAGCGCTGG.....................................................................................	26	8	0.50	4	0	4	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGCCAGC..........................................................................................	26	8	0.50	4	0	4	0	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAGCAGTTC...................................................................................................................................................................................................................................	25	6	0.50	3	0	0	0	1	0	0	0	2	0	0
...................................................................................................................................TCATGCAAGAAATCTGGTTGCAGGACC.................................................................................................................................	27	12	0.50	6	0	5	0	0	0	0	0	0	1	0
..............................CTGAGTCGTCATACACCAAGCGAGC........................................................................................................................................................................................................................................	25	6	0.50	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAGCTAC..............................................................	24	10	0.50	5	0	4	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TACTCCGCTCTCGACCAAAT.............................................	20	6	0.50	3	0	3	0	0	0	0	0	0	0	0
........................................................................CAAGGCTG--TTCGACCCCGCGGG...............................................................................................................................................................................................	22	12	0.50	6	0	2	0	0	0	0	0	2	2	0
......................................TCATACACCAAGCGAGCAGTTCTGTC...............................................................................................................................................................................................................................	26	6	0.50	3	0	0	0	0	0	0	0	3	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGG...........................................................................................................................................	19	13	0.46	6	0	3	0	0	0	0	0	0	3	0
.........................................................................................................................................................................GATGAGCTTCCAAGCGAGATG.................................................................................................	21	11	0.45	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCTCCCGG.................	24	14	0.43	6	0	6	0	0	0	0	0	0	0	0
........................................................GTTCTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	24	12	0.42	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................TGCAAGAAATCTGGTTGCAGGAC..................................................................................................................................	23	12	0.42	5	0	5	0	0	0	0	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAG.....................................................................................................................................	24	12	0.42	5	0	5	0	0	0	0	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAGG....................................................................................................................................	25	12	0.42	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGT..........................................................................................................................................	20	12	0.42	5	0	3	0	0	0	0	1	0	1	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--TTCG.........................................................................................................................................................................................................	27	12	0.42	5	0	5	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CCT-GC-GGAGCTACTCCGCTCTCGACC.................................................	26	5	0.40	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................TGCGCCAGCGCTGGCAAAGTTTCCT-G........................................................................	26	8	0.38	3	0	3	0	0	0	0	0	0	0	0
................................................................................................................................TCTTCATGCAAGAAATCTGGTTGC.......................................................................................................................................	24	11	0.36	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CATATTCCAAGATGGGTCGGC.......................	21	14	0.36	5	0	2	0	0	0	0	0	3	0	0
.................................................................................................TGGTTGGCCCCATTCATTGTCCG.......................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................TGAGTCGTCATACACCAAGCGAGC........................................................................................................................................................................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAGCAGA.....................................................................................................................................................................................................................................	23	6	0.33	2	0	0	0	0	0	0	0	2	0	0
........................................................GTTCTGTCCCAGATCGCAAGGC.................................................................................................................................................................................................................	22	12	0.33	4	0	4	0	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAGCAGTTCT..................................................................................................................................................................................................................................	26	6	0.33	2	0	0	0	0	0	0	0	2	0	0
...................................TCGTCATACACCAAGCGAGCAGTTCTG.................................................................................................................................................................................................................................	27	6	0.33	2	0	1	0	0	0	0	0	1	0	0
.................................AGTCGTCATACACCAAGCGAGCAGT.....................................................................................................................................................................................................................................	25	6	0.33	2	0	0	0	0	0	0	0	2	0	0
............................................................TGTCCCAGATCGCAAGGCTG--TTCG.........................................................................................................................................................................................................	24	12	0.33	4	0	2	0	0	0	0	0	1	1	0
........................................................GTTCTGTCCCAGATCGCAAGGCTG--T............................................................................................................................................................................................................	25	12	0.33	4	0	4	0	0	0	0	0	0	0	0
................................................................CCAGATCGCAAGGCTG--TTCGACCC.....................................................................................................................................................................................................	24	12	0.33	4	0	1	0	0	0	0	0	3	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAGGA...................................................................................................................................	26	12	0.33	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................TGGTTGGCCCCATTCATTGTCC........................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TACTCCGCTCTCGACCAAATCCATAT.......................................	26	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCTTCCAAG........................................................................................................	25	13	0.31	4	0	3	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAGCT................................................................	22	10	0.30	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................ATGAGCTTCCAAGCGAGATGCGCC.............................................................................................	24	10	0.30	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAGCTA...............................................................	23	10	0.30	3	0	2	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCTCCCG..................	23	14	0.29	4	0	4	0	0	0	0	0	0	0	0
................................................................................................................................TCTTCATGCAAGAAATCTGGTTG........................................................................................................................................	23	11	0.27	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAGC.................................................................	21	11	0.27	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGCGA.....................................................................................................	23	11	0.27	3	0	1	0	0	0	0	0	0	2	0
.......................................................AGTTCTGTCCCAGATCGCAAGGCTG--T............................................................................................................................................................................................................	26	11	0.27	3	0	3	0	0	0	0	0	0	0	0
.....................................................GCAGTTCTGTCCCAGATCGCAAGGC.................................................................................................................................................................................................................	25	11	0.27	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................GGGACGATGAGCTTCCAAGCGAG....................................................................................................	23	11	0.27	3	0	3	0	0	0	0	0	0	0	0
............................................................TGTCCCAGATCGCAAGGCTG--TT...........................................................................................................................................................................................................	22	12	0.25	3	0	3	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTCCAAGCGAGATGCGCCAGCGCTG......................................................................................	25	8	0.25	2	0	1	0	0	0	0	1	0	0	0
...................................................................................................................................TCATGCAAGAAATCTGGTTGCAGG....................................................................................................................................	24	12	0.25	3	0	3	0	0	0	0	0	0	0	0
................................................................CCAGATCGCAAGGCTG--TTCGACCCCG...................................................................................................................................................................................................	26	12	0.25	3	0	1	0	0	0	0	0	2	0	0
...................................................................................................................................TCATGCAAGAAATCTGGTTGCAGGAC..................................................................................................................................	26	12	0.25	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................TGCGCCAGCGCTGGCAAAGTT..............................................................................	21	8	0.25	2	0	2	0	0	0	0	0	0	0	0
................................................................CCAGATCGCAAGGCTG--TTCGACCCC....................................................................................................................................................................................................	25	12	0.25	3	0	0	0	0	0	0	0	3	0	0
....................................................................................................................................................................................AAGCGAGATGCGCCAGCGCTG......................................................................................	21	8	0.25	2	0	2	0	0	0	0	0	0	0	0
...........................................CACCAAGCGAGCAGTTCTGTCCCAGATC........................................................................................................................................................................................................................	28	8	0.25	2	0	2	0	0	0	0	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--TTT..........................................................................................................................................................................................................	26	12	0.25	3	0	3	0	0	0	0	0	0	0	0
............................................................TGTCCCAGATCGCAAGGCTG--TTCGA........................................................................................................................................................................................................	25	12	0.25	3	0	1	0	0	0	0	0	0	2	0
...................................................................................................................................................................................CAAGCGAGATGCGCCAGCGCTGGC....................................................................................	24	8	0.25	2	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGCCAGCGC........................................................................................	28	8	0.25	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTCCAAGCGAGATGCGCCAGC..........................................................................................	21	8	0.25	2	0	2	0	0	0	0	0	0	0	0
..............................................................TCCCAGATCGCAAGGCTG--TTCGACC......................................................................................................................................................................................................	25	12	0.25	3	0	2	0	0	0	0	0	1	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCTTCCA..........................................................................................................	23	13	0.23	3	0	2	0	0	0	0	1	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGGA.................................................................................................................................................................................................................	24	13	0.23	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGC.......................................................................................................	21	13	0.23	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCAAAGTTTCCT-GC-GGAG..................................................................	20	13	0.23	3	0	2	0	0	0	0	1	0	0	0
........................................................................................................................................................................CGATGAGCTTCCAAGCGAGATGCGC..............................................................................................	25	9	0.22	2	0	1	0	0	0	0	0	1	0	0
........................................................................................................................................................................CGATGAGCTTCCAAGCGAGATGC................................................................................................	23	9	0.22	2	0	0	1	0	0	0	0	1	0	0
........................................................................................................................................................................CGATGAGCTTCCAAGCGAGATGCGCC.............................................................................................	26	9	0.22	2	0	0	0	0	0	0	2	0	0	0
...................................................................................................................................................................................................................................................CATATTCCAAGATGGGTCGGCT......................	22	14	0.21	3	0	1	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................................................................TCCAAGATGGGTCGGCTCCCGG.................	22	14	0.21	3	0	0	0	0	0	0	1	2	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCT......................	19	14	0.21	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCTCC....................	21	14	0.21	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCTCCCGGC................	25	14	0.21	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GGCAAAGTTTCCT-GC-GGAGCTAC..............................................................	23	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCAA.....................	21	15	0.20	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................T-GC-GGAGCTACTCCGCTCTCGACC.................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TCCT-GC-GGAGCTACTCCGCTCTCGAC..................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................T-GC-GGAGCTACTCCGCTCTCGACCAA...............................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TTCCT-GC-GGAGCTACTCCGCTCTCGACC.................................................	28	5	0.20	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TTCCT-GC-GGAGCTACTCCGCTCTCGAC..................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................GAGCTTCCAAGCGAGATGCG...............................................................................................	20	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TCCT-GC-GGAGCTACTCCGCTCTC.....................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TCCT-GC-GGAGCTACTCCGCTCTCG....................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................AAGGCTG--TTCGACCCCGCGGGGTGGT..........................................................................................................................................................................................	26	11	0.18	2	0	0	0	0	0	0	0	1	1	0
........................................................................CAAGGCTG--TTCGACCCCGCGGGGTGGT..........................................................................................................................................................................................	27	11	0.18	2	0	1	0	0	0	0	0	1	0	0
........................................................................CAAGGCTG--TTCGACCCCGCGGGGTGG...........................................................................................................................................................................................	26	11	0.18	2	0	2	0	0	0	0	0	0	0	0
.........................................................................AAGGCTG--TTCGACCCCGCGGGGTGGTT.........................................................................................................................................................................................	27	11	0.18	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................CGATGAGCTTCCAAGCGAGATA.................................................................................................	22	11	0.18	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGT.......................................................................................................................................	23	11	0.18	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................GGATGGGACGATGAGCTTCCAAGCGAGA...................................................................................................	28	11	0.18	2	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................................................................AGCTACTCCGCTCTCGACCAAATC............................................	24	6	0.17	1	0	0	1	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAG.........................................................................................................................................................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTC.........................................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..................................GTCGTCATACACCAAGCGAG.........................................................................................................................................................................................................................................	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAGGAC..................................................................................................................................	27	12	0.17	2	0	2	0	0	0	0	0	0	0	0
......................................TCATACACCAAGCGAGCAGTTCTG.................................................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................CTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAGCAGTTCTGTC...............................................................................................................................................................................................................................	29	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................CTGTCCCAGATCGCAAGGCTG--T............................................................................................................................................................................................................	22	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..................................GTCGTCATACACCAAGCGAGC........................................................................................................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...............................................................CCCAGATCGCAAGGCTG--TTCGACC......................................................................................................................................................................................................	24	12	0.17	2	0	0	0	0	0	0	0	2	0	0
...............................TGAGTCGTCATACACCAAGCGAGCA.......................................................................................................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................CGTCATACACCAAGCGAGCAG......................................................................................................................................................................................................................................	21	6	0.17	1	0	0	0	0	0	0	0	0	1	0
............................................................TGTCCCAGATCGCAAGGCTG--TTCGAC.......................................................................................................................................................................................................	26	12	0.17	2	0	1	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................TCCT-GC-GGAGCTACTCCGCTCTCGAAA.................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................TCGTCATACACCAAGCGAGCA.......................................................................................................................................................................................................................................	21	6	0.17	1	0	0	0	0	0	0	0	1	0	0
...........................................................CTGTCCCAGATCGCAAGGCTG--TTC..........................................................................................................................................................................................................	24	12	0.17	2	0	1	0	0	1	0	0	0	0	0
..............................CTGAGTCGTCATACACCAAGCGAGCA.......................................................................................................................................................................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................CGACCCCGCGGGGTGGTTGGCCCCA..................................................................................................................................................................................	25	12	0.17	2	0	2	0	0	0	0	0	0	0	0
...............................TGAGTCGTCATACACCAAGCGAGCAG......................................................................................................................................................................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................AGTCGTCATACACCAAGCGAGC........................................................................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
................................GAGTCGTCATACACCAAGCGAGCAGT.....................................................................................................................................................................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--TAAA.........................................................................................................................................................................................................	27	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCTTCCT..........................................................................................................	23	13	0.15	2	0	2	0	0	0	0	0	0	0	0
.......................................................AGTTCTGTCCCAGATCGCAAG...................................................................................................................................................................................................................	21	13	0.15	2	0	2	0	0	0	0	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGCA.....................................................................................................................................................................................................................	20	13	0.15	2	0	2	0	0	0	0	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGT..................................................................................................................................................................................................................	23	13	0.15	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCTTCCAAGA.......................................................................................................	26	13	0.15	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................TCTGGTTGCAGGACCTGGGATGG.........................................................................................................................	23	13	0.15	2	0	1	0	0	1	0	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCTTC............................................................................................................	21	13	0.15	2	0	0	0	0	0	0	1	0	1	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAG........................................................................................................	20	13	0.15	2	0	2	0	0	0	0	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAA....................................................................................................................................................................................................................	21	13	0.15	2	0	2	0	0	0	0	0	0	0	0
...................................................................................TCGACCCCGCGGGGTGGTTGG.......................................................................................................................................................................................	21	13	0.15	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGC...............................................................................................................	18	14	0.14	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGT.......................	18	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.........................................TACACCAAGCGAGCAGTTCTGTCCC.............................................................................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ATATTCCAAGATGGGTCGGCTCC....................	23	14	0.14	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGCTCCC...................	22	14	0.14	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CATATTCCAAGATGGGTCGG........................	20	14	0.14	2	0	0	0	0	0	0	0	1	1	0
......................................................................................................................................................................................................................................................ATTCCAAGATGGGTCGGC.......................	18	14	0.14	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................CCTGGGATGGGACGATGAGC...............................................................................................................	20	14	0.14	2	0	0	0	0	0	0	0	0	2	0
.........................................TACACCAAGCGAGCAGTTCTGTC...............................................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
...............................TGAGTCGTCATACACCAAGCGA..........................................................................................................................................................................................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGGCCAG.............	29	14	0.14	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CCATATTCCAAGATGGGTCGGCT......................	23	14	0.14	2	0	1	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CATATTCCAAGATGGGTCGGCTCCCGGC................	28	14	0.14	2	0	0	0	0	0	0	0	2	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCTCCCGGCCAA.............	29	14	0.14	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCT..............................................................................................................	19	14	0.14	2	0	1	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................TTCCAAGATGGGTCGGCTCCCGG.................	23	14	0.14	2	0	0	0	0	0	0	0	2	0	0
.....................................................................................................................................................................................................................................................TATTCCAAGATGGGTCGGCC......................	20	14	0.14	2	0	0	2	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ATATTCCAAGATGGGTCGGC.......................	20	14	0.14	2	0	0	0	0	1	0	1	0	0	0
...................................................................................................................................................................................................................................................CATATTCCAAGATGGGTCGGCTCCC...................	25	14	0.14	2	0	1	0	0	0	0	1	0	0	0
.............................................................................................................................................................................AGCTTCCAAGCGAGATGCGCCAGC..........................................................................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCGCCAGCGCTGGCAAAGTTTCCT-G........................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................CAAGCGAGATGCGCCAGCGCTGG.....................................................................................	23	8	0.13	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CTCCGCTCTCGACCAAATCCA..........................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTCCAAGCGAGATGCGCCAGCGC........................................................................................	23	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TCCAAGCGAGATGCGCCAGCGCT.......................................................................................	23	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGAGCTTCCAAGCGAGATGCGCCAGCG.........................................................................................	27	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................CCAAGCGAGATGCGCCAGCGT........................................................................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0

droPer2

GTTTTTTTTTCGTCCCTCCCGAGTTAGCGCCTGAGTCGTCATACACCAAGCGAGCAGTTCTGTCCCAGATCGCAAGGCTG--TTCGACCCCGCGGGGTGGTTGGCCCCATTCATTGTCCGGTCCAAGATCTTCATGCAAGAAATCTGGTTGCAGGACCTGGGATGGGACGATGAGCTTCCAAGCGAGATGCACCAGCGCTGGCAAAGTTTTCCTGC-GGAGCTACTCCGCTCTCGACCAAA----------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................CAGTTCTGTCCCAGATCGCAAGG..................................................................................................................................................................................................................	23	20	1.00	20	0	20	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGC.......................................................................................................................................	23	20	0.45	9	0	9	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTG........................................................................................................................................	22	20	0.45	9	0	9	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCA......................................................................................................................................	24	20	0.30	6	0	6	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGGCT................................................................................................................................................................................................................	25	20	0.30	6	0	6	0	0	0	0
.................................................................................................................................CTTCATGCAAGAAATCTGGTTGCAGG....................................................................................................................................	26	20	0.25	5	0	5	0	0	0	0
...................................................................................................................................................................TGGGACGATGAGCTTCCAAGCGAGA...................................................................................................	25	20	0.20	4	0	4	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCTG--.............................................................................................................................................................................................................	23	20	0.20	4	0	4	0	0	0	0
................TCCCGAGTTAGCGCCTGAGTCG.........................................................................................................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0	0
................................................................................................................................................................GGATGGGACGATGAGCTTCC...........................................................................................................	20	20	0.10	2	2	0	0	0	0	0
.........................................................................AAGGCTG--TTCGACCCCGCGGT...............................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAGG....................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
..................................................................................................................TGTCCGGTCCAAGATCTTCATGCA.....................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................TGGGATGGGACGATGAGCTTCCAAGC.......................................................................................................	26	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................CAAGATCTTCATGCAAGAAATCTGGT..........................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................TTCATGCAAGAAATCTGGTTGC.......................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
................................GAGTCGTCATACACCAAGCGAG.........................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
........................TAGCGCCTGAGTCGTCATACACCAAGC............................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGC......................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
.................................................GCGAGCAGTTCTGTCCCAGATCGCAAAA..................................................................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0
.........................................................TTCTGTCCCAGATCGCAAGGCC................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGGCTG--TT...........................................................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0
................TCCCGAGTTAGCGCCTGAGTCGTCA......................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
................TCCCGAGTTAGCGCCTGAGTCGT........................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0
......................................................CAGTTCTGTCCCAGATCGCAAGGC.................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
..................................................................................................................................TTCATGCAAGAAATCTGGTTGCAGGACC.................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0

droAna3

ATTTTT-CTTCGTCCCGTCCGATATTACTCCAAAGGCAGTCCTCAGTAAACGGGAGGTACTGTCCCAAATTGCAAGACTT--TTTGACCCGGCAGGATGGCTGGCACCTTTCGTGATCCGAGCAAAAATCTTTATGCAGGAGATTTGGCTCCAGCAGCTGGGTTGGGACGATCCACTCCCTGCTGAT-----GGGAAAATGGAACGAATTTCT-TA-TGAGCTTTCCTACTATAAACCAAATCCGAATTCCGAGATGGGTGAAATTTGGTCCACAATCCAAAGTTCA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

ATTCTT-TTTTGTCCCGCCAGAATTGACTTCCGGCTCGGTTTTCACGAATCGTCAAGTCCTCTCCCAAATTGCCAAATTG--TACGATCCAGCAGGTTGGCTCGCTCCTTTCATTGTTCGGGCAAAAATGTTCATGCAAGACATTTGGCTTCTGGATCTAGGGTGGGATGACGCCCTCCCTCAAGATTTCTGTCAGCGATGGGTTGACTTCCT-AA-AGAATTACTCGTT------------------------------------CCGACCACACCTAAAGGTCGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GTTCTA-TTTTGTCCCAACAGAGGTCACCATTCAGGCAAACTATTCGAAACGCGATGTCTTATCCCAAATCGCGAAGTTG--TTCGACCCAGCTGGGTGGCTCTCCCCATTTGTGGTTCAGGCCAAAATCCTGATGCAGGATATCTGGTATC--------GAATGGGATGAGTTTCTTCCTGCAGA-CTACTACATCGCTGGCATGATTTCCT-TC-GGAGCTACAGTTTCCTCCACCAAGTTCGCATCCCGCGCTGGGTACATTTTCAACCGGGTGTACAAGTCCA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GTTTTT-CTTCGTTCCCCCAGATCTACCCACAGAAATCTCCCCCACAAAACGCCAGGTGCTTTCCCAAATCGCCAAACTG--TTTGATCCGGCAGGCTGGCTCGCTCCATTTGTTGTGTGTGCCAAGATCTTTATGCAAGAGATTTGGCTTCAGGAGCTGGGGTGGGACGATAAGCTGCCATCTGAGCTGTGCCAAAGGTGGCACAGTTTTCT-TC-AAAGCTATTCGATCCTTGATCAGGTCCGGATTCGAAGATGGGTTTCCTGTCGCCCAGA------ATTTCG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GTTCTT-TTTCCTGCCGAGGGAAATTTCTCTTCAAACAGACT-------ACTAGAGGTTTTATCCCAGATAGCTAAGCTG--TTTGATCCAGCAGGATGGTTATCGCCTTTCGTCATCCGGGCCAAATTTTTCATGCAAGAAATTTGATTGCTGGAGTTAAGCTGG------------------------------------CATGATTTTCT-TA-AAGGGTATCCAGCCCTGAAGAAGATTCGCATTCCAAGATGGGTGCGATTTCTTCCAGCAGCGAAACTGCA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GTTTTT-CTTCGTCCCACTAGCGTTGACAACGGAAATCTCCCCCACAAAACGGCAGGTCGTTTCCCAAATTGCCAAGCTG--TTTGATCCAGCAGGCTGGCTAGCTCCATTTGTTGTATGTGCCAAAATCTTTATGCAAGAGATTTGGTTTCAGGAGCTAGGGTGGGACGATGAACTTGCAACTGAGCTGTGCCAAAGGTGGCGCGACTTTCT-TC-AAAGTTACTCGGTCCTAGATCAGGTCCGAATTCCAAGATGGG----------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GTTCTT-CTTCGTCCCACCAGATCTAGCAACGTAAATCTCCCCCGAGAAACGCGAAGTCCTTTCCCAAATTGTCAAGTTG--TTCGATCTCGCAGGCTGGCTCGCTACATTTGTTGTGTGTTCCAAAATCTTTATGCAAGAGATTTGGCTTTG---------------------------------GCTGTGCCAAAGGTGAAACAGCTTCCT-CC-AGAGCTATTCGGTCCTATACCAGGTCAGAATACCAACATGGGATTTCATTCGTCCAGA------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GTTTTT-CTTCGCCCCTCCAGACCTATCCAACGAAGCCACGCTCACGAAACGTCATGTTCTTTCCCAAATCGCCAAGCTG--TTTGATCCAGCAGGCTGGCTCGCTCCTTTCGTGGTCTGTGCCAAGATTTTCATGCAGGAGATCTGGCTTCATGATCTTGGGTGGGATGATGAACTCCCAATTGAACTGTGCCAAAAGTGGCGTGATTTTCT-ACAAAAGCTACTCGGTCCTAGATCAAGTCCGAATTCCCAGATGGGTTTCTTTCCGCCCTGAGTTCCGAGTCGA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

ATTCTA-CTTCGTGCCGCCAGAAATAGTGGTGGAACCCTCCTTTACAAAGCGGGAGGTGTTGTCCCAAATCGCGAGGTTG--TTTGATCCAGCCGGATGGCTCGCTCCGTTTATAATACGTTCCAAAATGTTTATGCAGGAGATTTGGCTACAAGATTTCAGCTGGGATGATAAGCTTCCCAGCGAAATGAGTCAGAGGTGGCAGGCGTTTCT-TC-ATGAGTATTCCGACCTCAACCAGATCCGCGTCCCGAGATGGGTCTGTTTTCAGCCTGAGATCAAAGTGGC	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATTCTT-CTTCGTTCCGCCAGAGTTGGCTATCGAAACGTCCTTTACAAAACGCCAAGTCCTGTCCCAAATTGCCAAATTG--TTCGACCCTGCCGGCTGGTTAGCACCGTTTATCGTTCGAGCCAAAATTTTCATGCAGGAGATTTGGCTGCAGGAACTTGGGTGGGACGAAAACATTCCAAATGAGCTTTTTCAGCGATGGCTGAATTTTCT-TC-AAAGTTATTCAGTGTCAGAGCAGATACGCATTCCACGCTGGCTATCGTTTC-------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................................TTCT-TC-AAAGTTATTCAGTGTCAGA...................................................	25	1	2075.00	2075	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	20	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	13	6	0	0	8	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	5	0	5	17	0	0	0	0	0	0	0	1	0	10	1	0	0	0	0	0	0	0	0	0	1	2	0	3	0	4	1	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	9	0	45	7	1	0	1	45	33	19	3	2	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	3	0	4	0	63	2	0	3	0	5	0	0	0	0	0	3	9	0	1	0	1	0	0	0	0	0	1	0	0	0	104	12	176	22	620	173	118	58	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	85	14	0	19	0	0	0	0	0	0	0	0	0	0	0	0	66	47	139	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCT-TC-AAAGTTATTCAGTGTCAGAGC.................................................	27	1	1863.00	1863	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	6	1	8	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	6	0	8	0	0	0	0	78	0	21	5	1	0	0	11	12	2	2	1	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	0	0	3	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	142	23	37	14	681	355	118	49	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	91	8	0	3	0	0	0	0	0	0	0	0	0	0	0	0	31	12	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCAGTGTCAGAGCAGA..............................................	25	1	937.00	937	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	63	63	38	0	1	73	84	86	42	1	50	100	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	2	40	0	0	0	0	4	1	67	0	0	0	0	0	0	6	0	2	0	6	0	0	0	0	0	0	0	0	0	9	0	12	8	37	20	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	2	88	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCT-TC-AAAGTTATTCAGTGTCAGAG..................................................	26	1	365.00	365	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	2	12	1	14	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	11	1	0	0	0	5	10	3	0	1	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	2	0	1	0	0	0	0	2	0	0	0	0	0	0	0	1	6	2	0	1	0	0	0	0	0	0	0	0	0	0	13	9	23	3	64	24	7	19	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	19	7	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCAGTGTCAGAGCA................................................	23	1	363.00	363	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	44	28	56	0	0	14	25	15	9	0	14	51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	2	28	0	0	0	0	8	0	22	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCT-TC-AAAGTTATTCAGTGTCAGAGCA................................................	28	1	341.00	341	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	17	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	3	0	1	0	1	0	1	0	1	1	10	3	0	0	19	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	17	0	0	3	36	21	4	1	2	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	9	7	0	4	0	10	0	0	0	0	0	2	3	0	3	0	0	0	0	0	0	0	0	0	0	0	8	0	4	1	24	8	5	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCT-TC-AAAGTTATTCAGTGTCAG....................................................	24	1	282.00	282	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	6	3	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	11	1	0	0	0	12	2	2	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	2	0	15	0	0	1	0	3	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	9	1	11	3	59	15	12	10	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	9	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................................................................................CAGGAGATTTGGCTGCAGGAACTT...............................................................................................................................	24	20	5.95	119	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	2	1	8	0	0	4	1	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	9	8	0	0	1	3	2	2	3	3	0	0	0	6	0	0	0	9	0	0	0	0	1	0	1	0	1	1	0	0	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0
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.........................................................................CAAATTG--TTCGACCCTGCCGGCTGG...........................................................................................................................................................................................	25	20	2.95	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	8	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	4	1	17	9	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TTCATGCAGGAGATTTGGCTG........................................................................................................................................	21	20	2.95	59	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	7	30	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................GGAGATTTGGCTGCAGGAACTTGGG............................................................................................................................	25	20	2.95	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	10	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0
..............................................................TCCCAAATTGCCAAATTG--TTCGACCC.....................................................................................................................................................................................................	26	20	2.85	57	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................CAGGAGATTTGGCTGCAGGAACT................................................................................................................................	23	20	2.85	57	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	3	0	0	0	0	1	0	0	0	2	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	4	0	1	0	4	0	0	0	0	0	0	8	0	0	0	0	0	0	1	0	2	0	1	0	4	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSim2

ATTCTT-CTTCGTCCCGCCAGAGTTGGCTATCGAAATGTCCTTTACAAAACGCCAAGTCCTGTTCCAAATTGCCAAATTG--TTCGACCCTGCAGGCTGGTTAGCGCCGTTTATCGTTCGAGCTAAAATTTTCATGCAGGAGATTTGGCTGCAGGAGCTTGGGTGGGACGA----------------------------TGGCTTAATTTTCT-CC-AAAGTTATTCGGTTTTAGAGCAGATACGCATTCCACGCTGGCTATCGTTTCGTCCAGATTTCAAGGTCGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCAGA..............................................	25	2	725.00	1450	0	0	0	0	0	0	2	1098	30	318	0	0	2	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCAGATA............................................	27	2	282.50	565	0	0	0	0	0	0	3	461	2	99	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCAG...............................................	24	2	140.50	281	0	0	0	0	0	0	1	196	5	79	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................TATCGTTTCGTCCAGATTTCAAGGT...	25	5	112.40	562	0	0	3	1	0	0	196	91	162	67	22	0	16	4	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACGC................................	24	8	84.13	673	0	0	0	9	608	0	3	2	1	2	21	1	16	10	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACGCT...............................	25	8	65.50	524	0	4	7	11	160	0	7	3	2	0	306	19	4	1	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCCA...................................	27	3	62.33	187	0	0	0	0	0	0	7	3	4	1	0	0	155	17	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGGA.......................................................................................................................	25	4	49.25	197	0	0	0	1	0	0	84	60	32	5	14	0	1	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATT......................................	24	3	48.67	146	0	0	0	0	0	0	10	0	6	0	0	0	94	36	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTC.....................................	25	3	46.00	138	0	1	0	0	0	0	3	1	7	3	0	0	96	27	0	0	0
.......................................................................................................................................................................................................TGGCTTAATTTTCT-CC-AAAGTTATTCGG..........................................................	28	1	36.00	36	0	0	0	0	0	0	5	0	18	13	0	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGG........................................................................................................................	24	4	36.00	144	0	0	4	1	0	0	51	40	30	6	9	2	0	1	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCAGAT.............................................	26	2	36.00	72	0	0	0	0	0	0	0	63	0	9	0	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGCCAAA..................................................................................................................................................................................................................	25	1	33.00	33	0	0	0	0	4	0	3	4	20	1	1	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGA.......................................................................................................................	24	4	32.50	130	0	0	2	0	0	0	42	44	25	7	6	0	4	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCAT.......................................	23	3	32.33	97	0	0	0	0	0	0	3	1	2	2	0	0	57	32	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGA.......................................................................................................................	23	4	28.00	112	0	0	2	0	0	0	37	19	22	4	18	0	6	4	0	0	0
........TTCGTCCCGCCAGAGTTGGCTATCGA.............................................................................................................................................................................................................................................................	26	4	26.25	105	0	0	0	4	64	0	1	1	7	7	21	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCTTAATTTTCT-CC-AAAGTTATTCGGT.........................................................	29	1	26.00	26	0	0	0	0	0	0	4	3	16	3	0	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTG..........................................................................................................................	22	4	25.00	100	0	0	0	2	0	0	24	21	15	14	22	0	0	2	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGCTTG..............................................................................................................................	27	5	23.40	117	0	0	0	0	0	0	0	0	0	0	0	0	102	15	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCATGC......................................................................................................................................................	25	4	23.00	92	0	0	1	15	16	0	2	1	2	5	50	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGG.........................................................................................................................	23	4	23.00	92	0	1	1	2	0	0	19	24	19	6	14	4	1	1	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCATGCA.....................................................................................................................................................	26	4	23.00	92	0	0	1	15	24	0	1	5	5	7	34	0	0	0	0	0	0
....................................................................................................................................................................................................................T-CC-AAAGTTATTCGGTTTTAGAGCAGA..............................................	27	2	22.50	45	0	0	0	0	0	0	20	4	17	3	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCC....................................	20	8	21.25	170	0	0	0	0	170	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGAC......................................................................................................................	25	4	19.50	78	0	0	0	0	0	0	24	28	13	4	2	0	5	2	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCA................................................	23	2	18.50	37	0	0	0	0	0	0	0	20	1	14	0	0	2	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGAC......................................................................................................................	24	4	18.50	74	0	0	0	0	0	0	12	2	23	1	13	0	22	1	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTC.....................................	19	8	17.13	137	0	0	0	0	136	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCAC..................................	22	8	17.13	137	0	0	0	0	136	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGAT...........	21	5	16.60	83	0	0	0	0	62	0	0	0	1	1	11	0	8	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGG........................................................................................................................	23	4	16.00	64	0	0	0	0	0	0	15	19	13	5	11	0	1	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGCCAAAT.................................................................................................................................................................................................................	26	1	16.00	16	0	0	0	1	6	0	1	1	3	1	2	0	1	0	0	0	0
....TT-CTTCGTCCCGCCAGAGTTGGCTAT................................................................................................................................................................................................................................................................	26	5	15.40	77	0	0	0	0	0	0	6	7	14	15	8	0	23	4	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACGCTGG.............................	27	8	14.25	114	0	0	0	5	0	0	23	16	35	27	5	1	2	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCATGCAGG...................................................................................................................................................	28	4	14.00	56	0	0	2	9	0	0	6	7	23	6	3	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGGAC......................................................................................................................	26	4	13.50	54	0	0	0	1	0	0	17	20	4	2	6	0	4	0	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGA............	20	5	12.60	63	0	0	0	0	31	0	8	3	10	7	3	0	1	0	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGCT................................................................................................................................	25	5	12.40	62	0	0	0	0	0	0	0	0	3	0	0	0	56	3	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGG....................................................................................................................................................................................................................................................................	25	5	12.40	62	0	0	0	1	0	0	4	21	6	18	10	0	2	0	0	0	0
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTTGGG............................................................................................................................	26	4	12.00	48	0	0	0	0	0	0	1	0	0	0	5	0	33	9	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGATTTCAAGGT...	29	5	11.80	59	0	0	0	0	0	0	36	5	18	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GGCTATCGTTTCGTCCAGATTTC........	23	5	11.80	59	0	0	0	0	58	0	0	0	1	0	0	0	0	0	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGC...................................................................................................................................................................................................................................................................	26	5	11.20	56	0	0	0	3	0	0	5	3	5	8	14	0	12	6	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACGCTG..............................	26	8	11.13	89	0	2	11	3	0	0	0	1	0	1	61	5	4	1	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGGCTGG...........................................................................................................................................................................................	28	5	11.00	55	0	0	0	1	11	0	10	3	3	24	0	0	3	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCC....................................	26	3	11.00	33	0	0	0	0	0	0	2	0	2	1	0	0	20	8	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACG.................................	23	8	10.75	86	0	0	0	4	64	0	2	3	0	1	11	0	1	0	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGCTAT................................................................................................................................................................................................................................................................	29	4	10.75	43	0	0	0	0	0	0	3	5	2	5	3	0	25	0	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATT......................................	18	8	10.50	84	0	0	0	0	68	0	0	0	0	0	16	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGT...........................................................................................................................	21	4	10.25	41	0	0	0	0	0	0	6	4	14	9	8	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGACGA----------------------------........................................................................................	27	4	10.25	41	0	0	0	0	0	0	7	7	10	2	0	0	13	2	0	0	0
.........................................................TCCTGTTCCAAATTGCCAAATTG--TT...........................................................................................................................................................................................................	25	1	10.00	10	0	0	0	0	0	0	0	2	0	8	0	0	0	0	0	0	0
...................................................................................TCGACCCTGCAGGCTGGTTAGCGCCGTT................................................................................................................................................................................	28	5	9.80	49	0	0	0	4	0	0	3	3	0	0	24	0	13	2	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGCTA.................................................................................................................................................................................................................................................................	28	5	9.60	48	0	0	0	2	0	0	1	2	2	8	6	0	27	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTG..........................................................................................................................	20	4	9.25	37	0	0	0	0	0	0	9	11	5	1	10	0	1	0	0	0	0
...................................................................................TCGACCCTGCAGGCTGGTTAGCGCCG..................................................................................................................................................................................	26	5	9.20	46	0	0	0	0	9	0	0	0	0	0	24	0	13	0	0	0	0
...................................................................................TCGACCCTGCAGGCTGGTTAGCGCCGT.................................................................................................................................................................................	27	5	9.00	45	0	0	0	0	0	0	1	2	0	0	10	0	31	1	0	0	0
...........................................................................................................................................................................................................TTAATTTTCT-CC-AAAGTTATTCGGTT........................................................	26	1	9.00	9	0	0	0	0	0	0	3	0	4	2	0	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGCCAA...................................................................................................................................................................................................................	24	1	9.00	9	0	0	0	0	2	0	0	2	3	0	1	0	0	1	0	0	0
................................................................CCAAATTGCCAAATTG--TTCGAC.......................................................................................................................................................................................................	22	8	9.00	72	0	0	0	0	36	36	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCA...................................	21	8	9.00	72	0	0	0	0	68	0	0	0	0	0	2	0	0	2	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGGCTG............................................................................................................................................................................................	27	5	8.80	44	0	0	0	1	0	0	1	3	3	28	0	0	7	1	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGACGA----------------------------........................................................................................	26	4	8.75	35	0	0	0	0	0	0	1	2	4	0	0	0	26	2	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACGCTGGC............................	28	8	8.63	69	0	0	0	9	0	0	21	10	19	4	5	0	1	0	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTG...................................................................................................................................................................................................	21	10	8.10	81	0	0	0	0	38	38	2	1	0	1	0	0	0	1	0	0	0
.........................................................TCCTGTTCCAAATTGCCAAATTG--TTCGA........................................................................................................................................................................................................	28	1	8.00	8	0	0	0	0	0	0	0	6	0	2	0	0	0	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTT............................................................................................................................................................	19	4	8.00	32	0	0	0	0	32	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGG........................................................................................................................	22	4	8.00	32	0	0	0	0	0	0	8	3	8	0	11	1	1	0	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGCTT...............................................................................................................................	26	5	7.80	39	0	0	0	0	0	0	0	0	0	0	0	0	33	6	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	25	6	7.67	46	0	0	0	0	0	0	2	3	8	29	1	0	3	0	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGATTTCAAGG....	28	5	7.60	38	0	0	0	1	0	0	16	2	14	2	0	0	2	1	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTCA.........................................................................................................................................................	24	4	7.50	30	0	0	0	0	0	0	0	0	1	0	0	0	24	5	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGG.........................................................................................................................	21	4	7.25	29	0	0	0	0	0	0	5	3	8	2	9	1	1	0	0	0	0
................................................................................................................................................................................................................................................................GGCTATCGTTTCGTCCAGATTTCAAGGT...	28	5	7.20	36	0	0	0	0	0	0	17	5	11	3	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCCACGCTGGCTATCGTTTCGTCCAGA............	27	5	7.00	35	0	0	0	0	0	0	13	10	7	5	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TTCGGTTTTAGAGCAGATACGCAT.......................................	24	3	7.00	21	0	0	0	0	0	0	9	1	6	0	0	0	4	1	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGCCAAATT................................................................................................................................................................................................................	27	1	7.00	7	0	0	0	2	0	0	0	0	4	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................TGGCTTAATTTTCT-CC-AAAGTTATTCGGTT........................................................	30	1	7.00	7	0	0	0	0	0	0	3	0	3	1	0	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGG.........................................................................................................................	22	4	6.50	26	0	0	0	0	0	0	7	4	9	4	2	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGT...........................................................................................................................	19	4	6.50	26	0	0	0	0	0	0	3	1	4	4	14	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................TCCAGATTTCAAGGTCGA	18	5	6.20	31	0	0	0	0	31	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGCCAAATTG--.............................................................................................................................................................................................................	28	1	6.00	6	0	0	0	2	0	0	2	0	2	0	0	0	0	0	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	26	6	6.00	36	0	0	0	0	0	0	0	1	5	24	0	0	6	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGCCAAATTG--T............................................................................................................................................................................................................	29	1	6.00	6	0	0	1	1	0	0	3	0	1	0	0	0	0	0	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTCAT........................................................................................................................................................	25	4	6.00	24	0	0	0	0	0	0	0	0	0	0	0	0	18	6	0	0	0
..TCTT-CTTCGTCCCGCCAGAGTTGGCTA.................................................................................................................................................................................................................................................................	27	5	5.80	29	0	0	0	0	0	0	4	2	2	5	2	0	14	0	0	0	0
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTTGG.............................................................................................................................	25	5	5.80	29	0	0	0	0	0	0	0	0	0	1	0	0	19	9	0	0	0
...................................................................................................................................................................................................................................................................TATCGTTTCGTCCAGATTTCAAGG....	24	5	5.80	29	0	0	2	0	0	0	4	5	6	7	5	0	0	0	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGGCT.............................................................................................................................................................................................	26	6	5.67	34	0	0	0	0	0	0	3	4	7	18	0	0	2	0	0	0	0
....TT-CTTCGTCCCGCCAGAGTTGGCTA.................................................................................................................................................................................................................................................................	25	6	5.67	34	0	0	0	3	0	0	3	2	0	6	6	0	13	1	0	0	0
...................................................................................TCGACCCTGCAGGCTGGTTAGCGCC...................................................................................................................................................................................	25	5	5.60	28	0	0	0	1	18	0	3	0	0	0	4	0	2	0	0	0	0
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTTG..............................................................................................................................	24	5	5.60	28	0	0	0	0	0	0	0	0	0	1	2	0	20	5	0	0	0
..TCTT-CTTCGTCCCGCCAGAGTTGGCTAT................................................................................................................................................................................................................................................................	28	4	5.50	22	0	0	0	0	0	0	0	2	0	4	2	0	14	0	0	0	0
..................................................................................TTCGACCCTGCAGGCTGGTTAGCGCCG..................................................................................................................................................................................	27	5	5.40	27	0	0	0	1	0	0	1	0	2	0	15	0	8	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTT.....................................	25	3	5.33	16	0	0	0	0	0	0	0	0	0	0	0	0	13	3	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCA........................................	22	3	5.33	16	0	0	0	0	0	0	1	0	0	0	0	0	13	2	0	0	0
..............................................................................................................................................................................................................................TATTCGGTTTTAGAGCAGATACGCAT.......................................	26	3	5.33	16	0	0	0	0	0	0	7	0	5	0	0	0	3	1	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCATGCAGGA..................................................................................................................................................	29	4	5.00	20	0	0	0	2	0	0	6	8	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGGCTTAATTTTCT-CC-AAAGTTATT.............................................................	25	4	5.00	20	0	0	0	4	0	0	3	3	4	1	4	1	0	0	0	0	0
.................................................................................................................................................................................................................................................TACGCATTCCACGCTGGCTATCGT......................	24	8	5.00	40	0	0	11	0	0	0	6	7	6	8	2	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTG.......................................................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAATTTTCT-CC-AAAGTTATTCGGT.........................................................	24	1	5.00	5	0	0	0	0	0	0	1	0	3	0	0	0	1	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGT........................................................................................................................	24	4	4.75	19	0	0	0	0	0	0	5	8	6	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TAGAGCAGATACGCATTC.....................................	18	8	4.50	36	0	0	0	0	0	36	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCCACGCTGGCTATCGTTTC...................	20	8	4.38	35	0	0	0	0	33	0	0	0	1	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TACGCATTCCACGCTGGCTATCGTT.....................	25	8	4.38	35	0	0	0	3	0	0	4	9	1	12	6	0	0	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCATG.......................................................................................................................................................	24	4	4.25	17	0	0	0	1	0	0	2	1	2	4	7	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGACG.....................................................................................................................	25	4	4.25	17	0	0	0	0	0	0	1	0	1	0	0	0	14	1	0	0	0
..................................................................................TTCGACCCTGCAGGCTGGTTAGCGCCGT.................................................................................................................................................................................	28	5	4.20	21	0	0	0	0	0	0	1	0	0	0	0	0	19	1	0	0	0
.......................................................................................................................................................................................................................................................TTCCACGCTGGCTATCGTTTCGTCCAGA............	28	5	4.20	21	0	0	0	0	0	0	5	14	1	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CCACGCTGGCTATCGTTTCGTC................	22	8	4.13	33	0	0	0	0	33	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................TGGTTAGCGCCGTTTATCGTTCGAGC....................................................................................................................................................................	26	8	4.13	33	0	0	0	1	0	0	5	6	10	9	1	0	1	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTT...........................................................................................................................................................	20	4	4.00	16	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGATTTCAAG.....	27	5	4.00	20	0	0	0	1	0	0	7	0	10	2	0	0	0	0	0	0	0
...........................................TACAAAACGCCAAGTCCTGTTCCAAA..........................................................................................................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGC.................................................	22	2	4.00	8	0	0	0	0	0	0	0	5	0	3	0	0	0	0	0	0	0
..................................................................................TTCGACCCTGCAGGCTGGTTAGCGCC...................................................................................................................................................................................	26	5	4.00	20	0	0	3	1	9	0	2	0	0	0	2	1	2	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGGT.......................................................................................................................	25	4	4.00	16	0	0	0	0	0	0	4	7	4	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCAGAA.............................................	26	2	4.00	8	0	0	0	0	0	0	0	5	0	3	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................CAGATACGCATTCCACGCTGGC............................	22	9	3.89	35	0	0	0	0	0	35	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGG............................................................................................................................	20	4	3.75	15	0	0	2	0	0	0	1	0	3	2	7	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTG..........................................................................................................................	21	4	3.75	15	0	0	0	0	0	0	8	5	1	0	1	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGT.......................................................................................................................	23	4	3.75	15	0	0	0	0	0	0	5	2	2	1	5	0	0	0	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGCTTGG.............................................................................................................................	28	5	3.60	18	0	0	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0
.................................................................CAAATTGCCAAATTG--TTCGA........................................................................................................................................................................................................	20	10	3.60	36	0	0	0	0	36	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................TATCGTTTCGTCCAGATTTCAAGGTC..	26	4	3.50	14	0	0	0	0	0	0	3	2	3	2	3	0	1	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCAT........................................................................................................................................................	23	4	3.50	14	0	0	0	2	8	0	0	0	2	0	2	0	0	0	0	0	0
....................................................................................................................................................................................................................T-CC-AAAGTTATTCGGTTTTAGAGCAGATA............................................	29	2	3.50	7	0	0	0	0	0	0	6	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCA....................................	26	3	3.33	10	0	0	0	0	0	0	0	0	0	0	0	0	9	1	0	0	0
....................................................................................................................................CATGCAGGAGATTTGGCTGC.......................................................................................................................................	20	9	3.33	30	0	0	0	0	30	0	0	0	0	0	0	0	0	0	0	0	0
........................TGGCTATCGAAATGTCCTTTACAAAACG...........................................................................................................................................................................................................................................	28	1	3.00	3	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................CGGTTTTAGAGCAGATACGCATTCCA...................................	26	3	3.00	9	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0
............................................................................................................................................................................................................TAATTTTCT-CC-AAAGTTATTCGGTT........................................................	25	1	3.00	3	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAATTTTCT-CC-AAAGTTATTCGGT.........................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
...........................................TACAAAACGCCAAGTCCTGTTCCAA...........................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTT...............................................................................................................................	23	5	3.00	15	0	0	0	0	0	0	0	0	0	0	1	0	9	5	0	0	0
..TCTT-CTTCGTCCCGCCAGAGTTGGC...................................................................................................................................................................................................................................................................	25	5	3.00	15	0	0	1	2	0	0	0	1	1	4	4	0	2	0	0	0	0
................................................................................................................................................................................................................................................................GGCTATCGTTTCGTCCAGATTTCAAGG....	27	5	2.80	14	0	0	0	0	0	0	7	0	6	1	0	0	0	0	0	0	0
...................................................................................TCGACCCTGCAGGCTGGTTAGCGT....................................................................................................................................................................................	24	5	2.80	14	0	0	0	1	0	0	0	1	0	1	10	0	0	1	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGT.......................................................................................................................	24	4	2.75	11	0	0	0	0	0	0	6	3	0	1	1	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGACG.....................................................................................................................	26	4	2.75	11	0	0	0	0	0	0	3	4	0	0	0	0	4	0	0	0	0
................................................................................................................................TTTTCATGCAGGAGATTTGGCTGC.......................................................................................................................................	24	9	2.67	24	0	0	3	4	0	0	3	0	0	3	10	0	1	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCCAC..................................	28	3	2.67	8	0	0	1	0	0	0	0	0	0	1	0	0	6	0	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGG...............................................................................................................................................................................................	24	6	2.67	16	0	0	0	0	0	0	1	1	5	8	0	0	1	0	0	0	0
................................................................................................................................................................................................................................TTCGGTTTTAGAGCAGATACGCATT......................................	25	3	2.67	8	0	0	0	0	0	0	0	1	0	0	0	0	7	0	0	0	0
................................................................................................................................................................................................................................TTCGGTTTTAGAGCAGATACGCATTCCA...................................	28	3	2.67	8	0	0	0	0	0	0	2	0	0	0	0	0	5	1	0	0	0
..................................................................................TTCGACCCTGCAGGCTGGTTAGCGC....................................................................................................................................................................................	25	5	2.60	13	0	0	0	3	0	0	1	2	0	0	0	0	4	3	0	0	0
.........................................................................................................................................................................................................................AAAGTTATTCGGTTTTAGAGCAGA..............................................	24	2	2.50	5	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGAA......................................................................................................................	24	4	2.50	10	0	0	0	0	0	0	0	2	1	1	3	0	3	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGTT.......................................................................................................................	24	4	2.50	10	0	0	0	0	0	0	5	2	1	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGATT..........	22	5	2.40	12	0	0	0	0	0	0	6	0	4	0	2	0	0	0	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGCTA...............................................................................................................................	26	5	2.40	12	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0
..................................................................................TTCGACCCTGCAGGCTGGTTAGCGCCGTT................................................................................................................................................................................	29	5	2.40	12	0	0	0	0	0	0	1	0	0	0	2	0	9	0	0	0	0
..........................................................................................................................................................................................................................................................CACGCTGGCTATCGTTTCGTCCAGA............	25	5	2.40	12	0	0	0	0	0	0	6	3	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TAGAGCAGATACGCATTCCACGCTGGC............................	27	8	2.38	19	0	0	0	0	0	0	3	3	4	3	5	0	1	0	0	0	0
..............................................................................................................................................................................................................................TATTCGGTTTTAGAGCAGATACGCA........................................	25	3	2.33	7	0	0	0	0	0	0	0	0	1	1	0	0	5	0	0	0	0
......................................................................................................................................................................................................................................TTTAGAGCAGATACGCATTCCACGCTGG.............................	28	3	2.33	7	0	0	0	0	0	0	3	2	1	1	0	0	0	0	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCA.................................................................................................................................................................................................	23	6	2.17	13	0	0	0	0	0	0	2	3	4	4	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................GATACGCATTCCACGCT...............................	17	9	2.11	19	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTAGAGCAGATACGCATTCCACA.................................	23	8	2.00	16	0	0	0	1	12	0	0	0	0	0	2	0	1	0	0	0	0
.....................................................................................................................................................TGCAGGAGCTTGGGTGGGACGA----------------------------........................................................................................	22	4	2.00	8	0	0	0	0	0	0	0	0	1	0	0	1	4	2	0	0	0
..................CAGAGTTGGCTATCGAAATGTCCTT....................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................TATCGTTTCGTCCAGA............	16	5	2.00	10	0	0	0	0	0	0	5	3	1	1	0	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGAT......................................................................................................................	24	4	2.00	8	0	0	0	0	0	0	1	2	1	0	1	0	2	1	0	0	0
....................................................CCAAGTCCTGTTCCA............................................................................................................................................................................................................................	15	1	2.00	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................AGGAGCTTGGGTGGGACGA----------------------------TGGCTTA.................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..........................................................................................................CCGTTTATCGTTCGAGCT...................................................................................................................................................................	18	4	2.00	8	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGCTTA..............................................................................................................................	27	5	2.00	10	0	0	0	0	0	0	0	0	0	0	0	0	8	2	0	0	0
.................................................................................................................................................................................................................TTCT-CC-AAAGTTATTCGGTTTTAGAGC.................................................	27	2	2.00	4	0	0	1	0	0	0	0	0	2	1	0	0	0	0	0	0	0
ATTCTT-CTTCGTCCCGCCAGAGTT......................................................................................................................................................................................................................................................................	24	5	2.00	10	0	0	0	0	0	0	0	5	0	4	1	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATT........................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGCT.............................................................................................................................................................................................	27	6	2.00	12	0	0	0	0	0	0	1	3	1	7	0	0	0	0	0	0	0
....................................TGTCCTTTACAAAACGCCAAGTCCTGT................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAATTGC......................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
....................................................CCAAGTCCTGTTCCAAA..........................................................................................................................................................................................................................	17	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.................................................................................................................TCGTTCGAGCTAAAATTTTCATGC......................................................................................................................................................	24	4	2.00	8	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0
............................TATCGAAATGTCCTTTACAAAACGCCA........................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
............................................................TGTTCCAAATTGCCAAATTG--TTCGACCC.....................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
..............CCGCCAGAGTTGGCTATCGAAATG.........................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGATA..........	22	5	2.00	10	0	0	0	0	0	0	6	0	2	0	2	0	0	0	0	0	0
......................................................................................................................................................................................................................................TTTAGAGCAGATACGCATTCCACGCT...............................	26	3	2.00	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTCCACGCTGGCTATCGTTTCGTC................	24	8	2.00	16	0	0	1	0	0	0	2	4	4	4	0	0	1	0	0	0	0
..............................TCGAAATGTCCTTTACAAAACGCCAAGA.....................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................T-CC-AAAGTTATTCGGTTTTAGAGCAG...............................................	26	2	2.00	4	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGA...................................................	20	2	2.00	4	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0
........................................................................................CCTGCAGGCTGGTTAGCGCCG..................................................................................................................................................................................	21	5	1.80	9	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGCT..................................................................................................................................................................................................................................................................	27	5	1.80	9	0	0	0	0	0	0	0	1	0	3	3	0	1	1	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGCTGG...........................................................................................................................................................................................	29	5	1.80	9	0	0	0	0	0	0	3	1	3	2	0	0	0	0	0	0	0
...................................................................................TCGACCCTGCAGGCTGGTTAGCGC....................................................................................................................................................................................	24	5	1.80	9	0	0	0	1	0	0	1	0	0	0	2	0	5	0	0	0	0
...........GTCCCGCCAGAGTTGGCTATCGAAA...........................................................................................................................................................................................................................................................	25	4	1.75	7	0	0	0	0	0	0	1	0	4	2	0	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGG............................................................................................................................	18	4	1.75	7	0	0	0	0	0	0	0	0	1	0	5	1	0	0	0	0	0
...........GTCCCGCCAGAGTTGGCTATCGA.............................................................................................................................................................................................................................................................	23	4	1.75	7	0	0	0	0	0	0	4	0	2	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCCACGCTGGCTATCGTTTCGTC................	23	8	1.75	14	0	0	0	0	0	0	2	2	6	2	1	0	1	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGT........................................................................................................................	23	4	1.75	7	0	0	0	0	0	0	3	2	2	0	0	0	0	0	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGT...........................................................................................................................	20	4	1.75	7	0	0	0	1	0	0	1	3	1	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCCAT..................................	28	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGGCA.............................................................................................................................................................................................	26	6	1.67	10	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGG...............................................................................................................................................................................................	25	6	1.67	10	0	0	0	0	0	0	1	2	3	3	0	0	1	0	0	0	0
..............................................................................TG--TTCGACCCTGCAGGCTGGTTAGCGCCGT.................................................................................................................................................................................	30	5	1.60	8	0	0	0	0	0	0	0	1	0	0	0	0	7	0	0	0	0
........................................................................................................................................................................................................................................................TCCACGCTGGCTATCGTTTCGTCC...............	24	7	1.57	11	0	0	0	0	0	0	3	2	4	2	0	0	0	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAAT..............................................................................................................................................................	17	4	1.50	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGGAA......................................................................................................................	26	4	1.50	6	0	0	0	1	0	0	2	1	1	0	0	0	1	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGGACG.....................................................................................................................	27	4	1.50	6	0	0	0	0	0	0	3	0	0	0	0	0	2	1	0	0	0
...............................................................................................................TATCGTTCGAGCTAAAATTTTCATG.......................................................................................................................................................	25	4	1.50	6	0	0	0	0	0	0	0	0	4	0	2	0	0	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATTTTCATGCAG....................................................................................................................................................	27	4	1.50	6	0	0	0	1	0	0	0	0	2	1	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTCCACGCTGGCTATCGTTTCGT.................	23	8	1.50	12	0	0	0	0	0	0	1	3	4	4	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TTTTCT-CC-AAAGTTATTCGGTTTTAGAGC.................................................	29	2	1.50	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
...............................................................................................................TATCGTTCGAGCTAAAATTTTCATGC......................................................................................................................................................	26	4	1.50	6	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAGCAGATTT...........................................	28	2	1.50	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTT...........................................................................................................................................................	22	4	1.50	6	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0
........TTCGTCCCGCCAGAGTTGGCTATCGAAA...........................................................................................................................................................................................................................................................	28	4	1.50	6	0	0	0	0	0	0	2	0	1	0	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCGGTTTTAGAG..................................................	21	2	1.50	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................T-CC-AAAGTTATTCGGTTTTAGAGCA................................................	25	2	1.50	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
......................................................................................................................................................................................................................CC-AAAGTTATTCGGTTTTAGAGCAGA..............................................	26	2	1.50	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCT-CC-AAAGTTATTCGGTTTTAGAGCAGA..............................................	30	2	1.50	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGGCTATCGTTTCGTCCAGATTTCAA......	26	5	1.40	7	0	0	0	0	0	0	2	0	0	1	1	0	1	2	0	0	0
............................................................................................................................................................................................................................................GCAGATACGCATTCCA...................................	16	8	1.38	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
.........................................................................................................................................................................................................................................AGAGCAGATACGCATTCCACGCTGGC............................	26	8	1.38	11	0	0	0	0	0	0	1	2	2	3	3	0	0	0	0	0	0
......................................................................................................................................................................................................................................TTTAGAGCAGATACGCATTCCACGCTGGC............................	29	3	1.33	4	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCT....................................	26	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCATTCCT...................................	27	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
.................................................................................................................................................................................................................................TCGGTTTTAGAGCAGATACGCAA.......................................	23	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
........................................................................................................................................................................................................................................................TCCACGCTGGCTATCGTTTCGTCCA..............	25	6	1.33	8	0	0	0	0	0	0	1	0	2	0	4	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................TTCCACGCTGGCTATCGTTTCGTCC...............	25	7	1.29	9	0	0	0	0	0	0	0	1	3	3	2	0	0	0	0	0	0
........................................................................................................................................CAGGAGATTTGGCTGCAGGAGCTTGGG............................................................................................................................	27	4	1.25	5	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGACT.....................................................................................................................	26	4	1.25	5	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................TCGAGCTAAAATTTTCATGCAGGAGA................................................................................................................................................	26	4	1.25	5	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGTT.......................................................................................................................	25	4	1.25	5	0	0	0	0	0	0	2	1	1	0	0	0	1	0	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTC..........................................................................................................................................................	23	4	1.25	5	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTCATG.......................................................................................................................................................	26	4	1.25	5	0	0	0	0	0	0	0	0	1	0	0	0	1	3	0	0	0
.........................................................................................................................................................................................................................................AGAGCAGATACGCATTCCA...................................	19	8	1.25	10	0	0	0	0	0	0	0	0	1	0	9	0	0	0	0	0	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGGACA.....................................................................................................................	25	4	1.25	5	0	0	0	0	0	0	1	1	1	0	0	0	2	0	0	0	0
........................................................................................................................................................................................................................................TAGAGCAGATACGCATTCCACGCT...............................	24	8	1.25	10	0	0	0	0	0	0	0	1	0	0	9	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TACGCATTCCACGCTGGCTATCGTTT....................	26	8	1.25	10	0	0	0	1	0	0	0	2	1	3	2	0	1	0	0	0	0
................................................................................................................ATCGTTCGAGCTAAAATT.............................................................................................................................................................	18	4	1.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGA...........................................................................................................................	21	4	1.25	5	0	0	0	0	0	0	1	1	1	1	1	0	0	0	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTT......................................................................................................................................................................................................................................................................	23	5	1.20	6	0	0	0	0	0	0	0	1	0	2	0	0	3	0	0	0	0
.....T-CTTCGTCCCGCCAGAGTTGGCTAT................................................................................................................................................................................................................................................................	25	5	1.20	6	0	0	0	0	0	0	1	0	0	0	1	0	4	0	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGT.......................................................................................................................................................................................................................................................................	22	5	1.20	6	0	0	0	0	0	0	1	0	1	1	1	0	2	0	0	0	0

droSec2

ATTCTT-CTTCGTCCCGCCAGAGTTGGCTATCGAAACGTCCTTTACAAAACGCCAAGTCCTGTCCCAAATTGCCAAATTG--TTCGACCCTGCAGGCTGGTTAGCGCCGTTTATCGTTCGAGCTAAAATTTTCATGCAGGAGATTTGGCTGCAGGAGCTTGGGTGGGACGAAAACATTCCAAATGAGCTTTTTCAGCGATGGCTTAATTTTCT-CC-AAAGTTATTCAGTTTTAGAGCAGATACGCA----------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........................................TTACAAAACGCCAAGTCCTGTCC..............................................................................................................................................................................................................................	23	20	6.80	136	0	0	136	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	26	20	4.00	80	80	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTCATGCA.....................................................................................................................................................	28	20	1.50	30	26	0	4	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCAG...........................................................................................	24	20	1.35	27	27	0	0	0
..........................................................................................................................................................................................................................AAGTTATTCAGTTTTAGAGCAGA..............................................	23	20	0.90	18	4	0	14	0
..........................................................................................................................................................................................................................AAGTTATTCAGTTTTAGAGCAGATA............................................	25	20	0.60	12	0	1	7	4
..........................................TTACAAAACGCCAAGTCCTGT................................................................................................................................................................................................................................	21	20	0.55	11	0	0	11	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGC...................................................................................................................................................................................................................................................................	26	20	0.50	10	10	0	0	0
..........................................TTACAAAACGCCAAGTCCTG.................................................................................................................................................................................................................................	20	20	0.50	10	0	0	10	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCA.................................................................................................................................................................................................	23	20	0.40	8	7	0	1	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGG........................................................................................................................	24	20	0.35	7	0	0	7	0
..........................................TTACAAAACGCCAAGTCCTGTCCC.............................................................................................................................................................................................................................	24	20	0.35	7	0	0	0	7
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTTGGG............................................................................................................................	26	20	0.35	7	7	0	0	0
...........................................TACAAAACGCCAAGTCCTGTCC..............................................................................................................................................................................................................................	22	20	0.30	6	6	0	0	0
.........................................................................................................................................................................................................................AAAGTTATTCAGTTTTAGAGCAGA..............................................	24	20	0.30	6	3	2	0	1
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGG............................................................................................................................	20	20	0.25	5	4	0	0	1
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGG...............................................................................................................................................................................................	25	20	0.25	5	0	0	5	0
..................................................................................TTCGACCCTGCAGGCTGGTTAGCGCCGT.................................................................................................................................................................................	28	20	0.20	4	3	0	1	0
................................................................................................................................................................................TTCCAAATGAGCTTTTTCAGCGATGGC....................................................................................	27	20	0.20	4	0	0	4	0
........TTCGTCCCGCCAGAGTTGGCTATCGA.............................................................................................................................................................................................................................................................	26	20	0.20	4	4	0	0	0
...............................................................................................................TATCGTTCGAGCTAAAATTTTCATGC......................................................................................................................................................	26	20	0.20	4	4	0	0	0
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTTGG.............................................................................................................................	25	20	0.20	4	4	0	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGG...............................................................................................................................................................................................	24	20	0.20	4	3	0	0	1
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGGA.......................................................................................................................	25	20	0.15	3	2	0	0	1
..........................................................................................................................................................................................................................AAGTTATTCAGTTTTAGAGCAGAT.............................................	24	20	0.15	3	2	0	1	0
...........................................................................................................................TAAAATTTTCATGCAGGAGATTTGGC..........................................................................................................................................	26	20	0.15	3	3	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTCA.........................................................................................................................................................	24	20	0.15	3	0	0	2	1
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGCT.............................................................................................................................................................................................	27	20	0.15	3	3	0	0	0
.......................................................................GCCAAATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	24	20	0.10	2	2	0	0	0
......................................................................................................................................TGCAGGAGATTTGGCTGCAGGAGC.................................................................................................................................	24	20	0.10	2	1	0	1	0
...............................................................................................................TATCGTTCGAGCTAAAATTTTCATGCA.....................................................................................................................................................	27	20	0.10	2	2	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGG.........................................................................................................................	22	20	0.10	2	2	0	0	0
...................................................................................................................................................................TGGGACGAAAACATTCCAAATGAGC...................................................................................................	25	20	0.10	2	2	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGA.......................................................................................................................	24	20	0.10	2	0	0	2	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGG.........................................................................................................................	23	20	0.10	2	0	0	2	0
..............................................................................TG--TTCGACCCTGCAGGCTGGTTAGCGC....................................................................................................................................................................................	27	20	0.10	2	2	0	0	0
...............................................................................................................................................TTTGGCTGCAGGAGCTTGG.............................................................................................................................	19	20	0.10	2	2	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGCTA.................................................................................................................................................................................................................................................................	28	20	0.10	2	2	0	0	0
..................................................................................................................................TTCATGCAGGAGATTTGGCTGCAGG....................................................................................................................................	25	20	0.10	2	2	0	0	0
.TTCTT-CTTCGTCCCGCCAGAGTTGGCTAT................................................................................................................................................................................................................................................................	29	20	0.10	2	2	0	0	0
......................GTTGGCTATCGAAACGTCCTTT...................................................................................................................................................................................................................................................	22	20	0.10	2	0	0	0	2
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGT...........................................................................................................................	21	20	0.10	2	0	0	2	0
....................................................................................................................................................CTGCAGGAGCTTGGGTGGGAC......................................................................................................................	21	20	0.05	1	0	0	0	1
............TCCCGCCAGAGTTGGCTATCGAAACG.........................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0
..........................................................................AAATTG--TTCGACCCTGCAGGCTGGT..........................................................................................................................................................................................	25	20	0.05	1	0	0	1	0
.............................................CAAAACGCCAAGTCCTGTCCCAAAT.........................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
.............................................................................................................TTTATCGTTCGAGCTAAAATTTTCATG.......................................................................................................................................................	27	20	0.05	1	1	0	0	0
.............CCCGCCAGAGTTGGCTATCGAAACGT........................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCA............................................................................................	23	20	0.05	1	0	1	0	0
......................................................................TGCCAAATTG--TTCGACCCTGCAGGCT.............................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAG................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0
.......................................................................................................................................................................................................................C-AAAGTTATTCAGTTTTAGAGC.................................................	22	20	0.05	1	0	0	1	0
........................................................................................................................................................................CGAAAACATTCCAAATGAGCTTTTT..............................................................................................	25	20	0.05	1	0	0	1	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCAGCGA........................................................................................	27	20	0.05	1	0	0	1	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGCTGG...........................................................................................................................................................................................	29	20	0.05	1	1	0	0	0
.............................................................................TTG--TTCGACCCTGCAGGCTGGTTAGC......................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
............................TATCGAAACGTCCTTTACAAAACGCC.........................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.....................................................................................................TAGCGCCGTTTATCGTTCGAGCTAAAAT..............................................................................................................................................................	28	20	0.05	1	1	0	0	0
.........................................................................................................................................................................................................................AAAGTTATTCAGTTTTAGAGCAGAT.............................................	25	20	0.05	1	1	0	0	0
.........................................................................CAAATTG--TTCGACCCTGCAGGCTGGT..........................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
...........................................................................AATTG--TTCGACCCTGCAGGCTGGT..........................................................................................................................................................................................	24	20	0.05	1	0	0	1	0
............................................................................................................................................................................................TTTTTCAGCGATGGCTTAATTTTCT-.........................................................................	25	20	0.05	1	1	0	0	0
............TCCCGCCAGAGTTGGCTATCGAAACGTT.......................................................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0
...............................................................................................................................ATTTTCATGCAGGAGATTTGGT..........................................................................................................................................	22	20	0.05	1	1	0	0	0
..........................................................................................................................................................................................................................AAGTTATTCAGTTTTAGAGCA................................................	21	20	0.05	1	1	0	0	0
............................................................TGTCCCAAATTGCCAAATTG--TTCGACCC.....................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0
...........................................TACAAAACGCCAAGTCCTGTC...............................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGGACG.....................................................................................................................	26	20	0.05	1	0	0	1	0
..............................................................................TG--TTCGACCCTGCAGGCTGGTT.........................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
..........................................TTACAAAACGCCAAGTCCTGTCCCAAAG.........................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0
.........................................................................................................................................AGGAGATTTGGCTGCAGGAGCTTGGGT...........................................................................................................................	27	20	0.05	1	1	0	0	0
...........................................................................................................................................................................................................................AGTTATTCAGTTTTAGAGCAGATA............................................	24	20	0.05	1	1	0	0	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCAGCA.........................................................................................	26	20	0.05	1	1	0	0	0
..................................................................AAATTGCCAAATTG--TTCGACCCTGC..................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
..................................................................................................................................................GGCTGCAGGAGCTTGGGTGGG........................................................................................................................	21	20	0.05	1	0	0	1	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTG..........................................................................................................................	21	20	0.05	1	1	0	0	0
........................................................................CCAAATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
..........................................TTACAAAACGCCAAGTCCTGTCCCA............................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0
.............................................CAAAACGCCAAGTCCTGTCC..............................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0
..............................................................................................................................AATTTTCATGCAGGAGATTTG............................................................................................................................................	21	20	0.05	1	1	0	0	0
....TT-CTTCGTCCCGCCAGAGTT......................................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0
................................................................................................................................................................................................TCAGCGATGGCTTAATTTTCT-CC-A.....................................................................	24	20	0.05	1	1	0	0	0
.............................................................................TTG--TTCGACCCTGCAGGCTGGTTA........................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.......................................................................................................................................................................ACGAAAACATTCCAAATGAGC...................................................................................................	21	20	0.05	1	0	0	0	1
............TCCCGCCAGAGTTGGCTATCG..............................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0
..............................................................................................................TTATCGTTCGAGCTAAAATTTTCATG.......................................................................................................................................................	26	20	0.05	1	0	0	1	0
...................................................................................................................................TCATGCAGGAGATTTGGCTGC.......................................................................................................................................	21	20	0.05	1	1	0	0	0
.......................................................................................................................................................................................TGAGCTTTTTCAGCGATGGCTTAATT..............................................................................	26	20	0.05	1	1	0	0	0
................................................................................................................................................TTGGCTGCAGGAGCTTGGGTGGG........................................................................................................................	23	20	0.05	1	1	0	0	0
.....................................................................................................................................................TGCAGGAGCTTGGGTGGGACG.....................................................................................................................	21	20	0.05	1	1	0	0	0
........................................................................................................................................CAGGAGATTTGGCTGCAGGAGCTT...............................................................................................................................	24	20	0.05	1	0	0	1	0
.......................................................................GCCAAATTG--TTCGACCCTGCAGGCTG............................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
..........................................................................AAATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	21	20	0.05	1	1	0	0	0
.......................................................................................................................................................................................................................C-AAAGTTATTCAGTTTTAGAGCAGATA............................................	27	20	0.05	1	1	0	0	0
....TT-CTTCGTCCCGCCAGAGTTGGCTATC...............................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
...............................................................................................................................ATTTTCATGCAGGAGATTTGGC..........................................................................................................................................	22	20	0.05	1	0	0	1	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCAGT..........................................................................................	25	20	0.05	1	0	1	0	0
...................................................................................................................................TCATGCAGGAGATTTGGC..........................................................................................................................................	18	20	0.05	1	1	0	0	0
ATTCTT-CTTCGTCCCGCCAGAGT.......................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0
.................................................................................................................................................TGGCTGCAGGAGCTTGGGTGGG........................................................................................................................	22	20	0.05	1	0	0	0	1
.........................................................................................................................................................................................................................AAAGTTATTCAGTTTTAGAGCAGATA............................................	26	20	0.05	1	0	0	0	1
...............................................................................................................................................TTTGGCTGCAGGAGCTTGGGTGGT........................................................................................................................	24	20	0.05	1	0	0	1	0
...........................................................................................................................................................AGCTTGGGTGGGACGAAAACA...............................................................................................................	21	20	0.05	1	0	0	0	1
.........................................................................................................................................................................................................................AAAGTTATTCAGTTTTAGAGCA................................................	22	20	0.05	1	0	0	1	0
.........................................................................CAAATTG--TTCGACCCTGCAGGCTG............................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTC.............................................................................................	22	20	0.05	1	1	0	0	0
.....................................................................TTGCCAAATTG--TTCGACCCTGCAGGCTG............................................................................................................................................................................................	28	20	0.05	1	0	0	1	0
.................................................ACGCCAAGTCCTGTCCCA............................................................................................................................................................................................................................	18	20	0.05	1	1	0	0	0
...............................................................................................................TATCGTTCGAGCTAAAATTTTCATG.......................................................................................................................................................	25	20	0.05	1	1	0	0	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCAGCGAT.......................................................................................	28	20	0.05	1	0	0	1	0
...........................................................................AATTG--TTCGACCCTGCAGGC..............................................................................................................................................................................................	20	20	0.05	1	0	0	1	0
...........................................................................................................................................................................................................................AGTTATTCAGTTTTAGAGCAGA..............................................	22	20	0.05	1	1	0	0	0
.......................................................................................................................................................................ACGAAAACATTCCAAATGAGCTT.................................................................................................	23	20	0.05	1	1	0	0	0
..........................................TTACAAAACGCCAAGTCCTGTCCCAAAT.........................................................................................................................................................................................................................	28	20	0.05	1	0	0	1	0
.................................................................................................................................................................................TCCAAATGAGCTTTTTCAGCGATG......................................................................................	24	20	0.05	1	1	0	0	0
.............................................................................................................................................................................ACATTCCAAATGAGCTTTTTCAG...........................................................................................	23	20	0.05	1	1	0	0	0
............................................................................................................................................................................AACATTCCAAATGAGCTTTTTCAGCGATG......................................................................................	29	20	0.05	1	1	0	0	0
.....T-CTTCGTCCCGCCAGAGTTGGCTATC...............................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0
.................................................................................................TGGTTAGCGCCGTTTATCGTTCGAGC....................................................................................................................................................................	26	20	0.05	1	0	0	0	1

droYak3

GTTTTT-CTTCACTCCTGCAGAATTGACCTCGGGGTCGTCGTTCTCAAAGCGTCAAGTCCTTTCCCAAATTGCCAAGCTA--TTCGATCCAGCCGGCTGTCTAGCCCCCTTCATTGTCCGGACAAAGATGTTTATGCAGGACATTTGGCTTAAGGATCTAGGCTGGG-CGATGTCCTCCCTCAAGAATTCTGCAAGAGATGAATTGACTTCCG-GG-AAAATTACTCGGCGCTCGATCAGATCCACTTTCCCA--------------------CACTTGAAAATAGA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................TCGATCCAGCCGGCTGTCTAGCCCC...................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................AATTACTCGGCGCTCGATCAGATC............................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TCCCTCAAGAATTCTGCAAGAGATG......................................................................................	25	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0

droEre2

ATTCTA-TTTCGTCCCTCCTGAAAAAGCTTTGGAACCCCCA------------AATTTTTTGTCCCAAATCTCCGGGTTTCTTTCGATCCTGCCGGGTTGCTCGCTCTGTTCATCATCCGTTCCAAAATGTTCATGCAGGAGATTTGGTTGCGGGACTTAGGCTGGGACAT----------------------------------TCGTTCAT-AG-ATGACTATTCCGGCCTCAACCAGATCCGTGTTCCGAGATGGGTCTGGTATCAGCCTGAAGA-------AA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dvi_9700

scaffold_12958:1076408-1076558 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads