ID:

dvi_9683

 Coordinate:

scaffold_12958:777087-777237 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.4 -28.3

Flybase annnotation

CDS [Dvir\GJ11166-cds]; exon [dvir_GLEANR_11131:1]; intron [Dvir\GJ11166-in]

Repeatable elements

NameClassFamilyStrand
BEL-4_DWil-I-intLTRPao-
BEL-4_DWil-LTRLTRPao-
mature
  1. scaffold_12815:396101-396116 +
  2. scaffold_12847:123467-123482 +
  3. dvi_9683  scaffold_12958:777163-777178 +
star

Sense Strand Reads

-------###########################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATACAATGTTCATTCATAGTCTGATGCAGACACGTCTCATTGAATGCGGTAAGTACCGAGTGTCTTCAACGATCACAATCCAATGTCCAATTCTAAACTCCTCAGTCCAATCGCAAAGAATCTCCTCACAGGAGGCACCAAAAATATGTTGGATATCGGCTGCGCCAGGTGCGGAGACCCAAACTGCCCGTAGATATGATGCGGCCTGCGGCGTGGTTACCTACCAAGGCAGCTTTGAGGGTTTCGCAC
**************************************************.......(((((((((......)).))).(((((((((...........(((((.((.....((.....)).....))...)))))...........))))))))).))))(((((...(((..((....))..)))...)))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 M047
female body
 SRR060681
Argx9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060678
9x140_testes_total
 M061
embryo
 SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060667
160_females_carcasses_total
 M028
head
 SRR060687
9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V116
male body		 M027
male body		 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR1106730
embryo_16-30h
 SRR060654
160x9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060688
160_ovaries_total
 SRR060673
9_ovaries_total
 SRR060671
9x160_males_carcasses_total
 SRR1106728
larvae
 SRR1106727
larvae
 SRR1106729
mixed whole adult body
 SRR060655
9x160_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR1106725
embryo_14-16h
 SRR1106722
embryo_10-12h
 SRR1106723
embryo_12-14h
 SRR1106726
embryo_14-16h
 SRR060657
140_testes_total
 V053
head
 SRR060658
140_ovaries_total
 SRR1106724
embryo_12-14h
 SRR1106713
embryo_0-2h
 SRR1106718
embryo_6-8h
 SRR1106720
embryo_8-10h
 SRR1106721
embryo_10-12h
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR1106712
embryo_0-2h
 SRR1106717
embryo_6-8h
 SRR1106719
embryo_8-10h
 SRR1106714
embryo_2-4h
 V047
embryo
..............................................................................................................................CTCACAGGAGGCACCA............................................................................................................. 16 0 3 154.67 464 431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 9 6 4 0 0 0 0 0 5 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................CCCCTCACAGGAGGCACCA............................................................................................................. 19 1 1 142.00 142 0 9 10 15 6 10 3 7 4 2 10 8 5 8 4 1 2 6 2 1 2 1 5 1 3 2 3 1 1 4 1 2 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCACAGGAGGCACCA............................................................................................................. 18 1 3 96.00 288 18 6 12 11 15 8 8 10 13 3 5 6 9 5 4 55 3 7 4 7 2 34 8 10 0 3 4 1 0 1 1 2 3 2 0 1 0 1 1 1 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCCCCTCACAGGAGGCACCA............................................................................................................. 20 1 1 66.00 66 0 5 7 1 3 3 5 2 1 4 2 2 2 1 6 0 1 0 4 3 2 0 0 1 2 1 0 4 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACCA............................................................................................................. 17 0 3 53.67 161 155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0
........................................................................................................................GTTCCCCTCACAGGAGGCACCA............................................................................................................. 22 3 1 43.00 43 0 3 4 2 2 1 2 2 0 1 0 0 6 4 1 0 3 1 2 2 3 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTCCCCTCACAGGAGGCACCA............................................................................................................. 21 2 1 39.00 39 0 3 9 5 1 0 3 3 5 0 0 3 1 0 0 0 2 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCTCCTCACAGGAGGCACCA............................................................................................................. 20 0 1 36.00 36 0 1 4 0 1 1 2 1 3 4 1 0 0 0 4 0 1 3 0 1 2 0 0 0 0 1 0 1 0 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCCCCTCACAGGAGGCACCA............................................................................................................. 20 2 2 36.00 72 0 10 6 2 2 4 2 6 4 6 3 4 2 1 1 0 3 1 3 0 1 2 0 0 0 1 3 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCACCA............................................................................................................. 18 0 3 27.67 83 2 2 8 7 12 6 1 3 3 2 2 1 3 1 0 0 3 2 3 7 0 0 4 1 0 1 0 1 1 0 1 2 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTTCTCACAGGAGGCACCA............................................................................................................. 19 2 4 27.00 108 0 9 12 1 9 17 0 0 3 0 2 2 0 6 3 0 3 0 5 1 6 0 0 0 3 5 5 4 0 1 0 1 1 3 0 0 0 3 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATCCTCACAGGAGGCACCA............................................................................................................. 19 1 3 20.67 62 5 18 5 0 1 1 1 3 4 3 1 0 0 1 0 0 2 3 0 1 0 0 4 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................CACCCCTCACAGGAGGCACCA............................................................................................................. 21 3 6 20.50 123 0 7 6 8 8 4 6 9 4 1 6 9 3 3 5 0 4 0 7 5 0 0 5 7 5 0 3 0 0 1 0 0 2 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACCCCTCACAGGAGGCACCA............................................................................................................. 20 2 3 16.00 48 0 5 4 3 5 1 3 1 1 4 0 1 0 6 2 0 0 0 1 1 0 0 3 0 0 1 2 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................CATCCCCTCACAGGAGGCACCA............................................................................................................. 22 2 1 11.00 11 0 0 0 1 0 1 2 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGCACC.............................................................................................................. 15 0 3 10.00 30 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACCC............................................................................................................. 17 1 4 8.00 32 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCTCACAGGGGGCACCA............................................................................................................. 19 2 1 7.00 7 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTCTCACAGGAGGCACCA............................................................................................................. 18 1 3 7.00 21 0 3 3 0 1 1 0 0 1 0 1 2 0 2 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCCTCACAGGAGGCACCA............................................................................................................. 19 2 4 6.25 25 1 8 1 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 3 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CCCCCCTCACAGGAGGCACCA............................................................................................................. 21 3 4 6.25 25 0 2 1 3 1 1 1 0 3 3 1 0 0 0 2 0 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTCTCACAGGAGGCACCA............................................................................................................. 19 2 4 6.25 25 0 3 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 5 0 0 0 1 2 0 1 0 0 0 0 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCACAGGGGGCACCA............................................................................................................. 18 2 5 6.20 31 0 0 1 1 3 1 0 0 0 1 0 1 0 0 1 7 1 0 1 0 0 2 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................CCCTCACAGGAGGCACC.............................................................................................................. 17 1 4 5.00 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 2 3 1 0 0 0 0 2 0 2 3 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0
........................................................................................................................GTTCTCCTCACAGGAGGCACCA............................................................................................................. 22 2 1 5.00 5 0 0 0 0 0 0 0 0 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCTCCCCTCACAGGAGGCACCA............................................................................................................. 22 3 2 4.50 9 0 1 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGCAGCA............................................................................................................. 16 1 10 3.80 38 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACC.............................................................................................................. 16 0 3 3.33 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0
.........................................................................................................................TTCCCCTCACAGGGGGCACCA............................................................................................................. 21 3 1 3.00 3 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATCCCCTCACAGGAGGCACCA............................................................................................................. 21 1 1 3.00 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTCCTCACAGGAGGCACCA............................................................................................................. 19 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCCCCTCACAGGGGGCACCA............................................................................................................. 20 2 1 3.00 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACCTCACAGGAGGCACCA............................................................................................................. 18 1 4 2.75 11 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AACCTCACAGGAGGCACCA............................................................................................................. 19 2 4 2.75 11 2 4 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCCCCA............................................................................................................. 17 1 3 2.67 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCACTCCTCACAGGAGGCACCA............................................................................................................. 22 3 6 2.17 13 0 1 0 0 0 0 2 1 0 3 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTCCTCACAGGAGGCACCA............................................................................................................. 19 1 3 2.00 6 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCACAGGAGGCACCA............................................................................................................. 15 0 3 2.00 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTTCCCCTCACAGGAGGCACCA............................................................................................................. 22 3 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTCCCTCACAGGAGGCACCA............................................................................................................. 20 2 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCGCCA............................................................................................................. 17 1 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCCCCTCACAGGGGGCACCA............................................................................................................. 20 3 6 1.17 7 0 1 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCTCCTCACAGGAGGCACCAC............................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCTCACAGGAGGCACCAA............................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTCCCCTCACAGGAGGCACC.............................................................................................................. 20 2 2 1.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCCCCTCACACGAGGCACCA............................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCCCCTCACTGGAGGCACCA............................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACCCCTCACAGGGGGCACCA............................................................................................................. 21 3 2 1.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CATCCCCTCGCAGGAGGCACCA............................................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CACCTCACAGGAGGCACCA............................................................................................................. 19 1 2 1.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCTCACAGGAGGCACC.............................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCCCCTCACAGGAGGCACCA............................................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GGTTCCCCTCACAGGAGGCACCA............................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GAGTTCCCTCACAGGAGGCACCA............................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGGGGCACCA............................................................................................................. 17 1 3 1.00 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................TCGCTCCTCACAGGAGGCACCA............................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGCATCA............................................................................................................. 16 1 7 0.86 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCACAGGAGGCACCC............................................................................................................. 18 2 5 0.80 4 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTTACAGGAGGCACCA............................................................................................................. 18 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCTCCA............................................................................................................. 17 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATCCTCACAGGGGGCACCA............................................................................................................. 19 2 3 0.67 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCACC.............................................................................................................. 17 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGGGGCACCA............................................................................................................. 16 1 3 0.67 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCACAGGAGGCACCAAAAAAA....................................................................................................... 21 1 3 0.67 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGCGGCACCA............................................................................................................. 16 1 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCCCTCCTCACAGGAGGCACCA............................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GATCCCCCTCACAGGAGGCACCA............................................................................................................. 23 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GTTCCCCTCACAGGAGGCACC.............................................................................................................. 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGTAGGCACCA............................................................................................................. 16 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCTCTCAGGAGGCACCA............................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTTTCTCACAGGAGGCACCA............................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCCCAGGAGGCACCA............................................................................................................. 16 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCTCCTCACAGGAGGCACCA............................................................................................................. 20 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACCCCTCACAGGAGGCACCA............................................................................................................. 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACCAC............................................................................................................ 18 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCACTCACAGGAGGCACCA............................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCACAGGAGGGACCA............................................................................................................. 18 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAACCCTCACAGGAGGCACCA............................................................................................................. 21 3 4 0.50 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACCTCACAGGGGGCACCA............................................................................................................. 18 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCCCACAGGAGGCACCA............................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCTCCC............................................................................................................. 17 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCTCTCACAGGAGGCACCA............................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCTCACAGGACGCACCA............................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACCCCTCACAGGGGGCACCA............................................................................................................. 20 3 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTTCTCACAGGAGGCACC.............................................................................................................. 18 2 5 0.40 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACAA............................................................................................................. 17 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACCTCACAGGAGGCACCC............................................................................................................. 18 2 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCTCACAGGAGGCACCA............................................................................................................. 17 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................TGCTCACAGGAGGCACCA............................................................................................................. 18 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTTACAGGAGGCACCAAAAA......................................................................................................... 21 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTAACAGGAGGCACCA............................................................................................................. 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTCTCACAGGAGGCACCAA............................................................................................................ 19 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGCACCAAAAA......................................................................................................... 20 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAAACCCTCACAGGAGGCACCA............................................................................................................. 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGCACCAAAA.......................................................................................................... 19 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCACCAA............................................................................................................ 19 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCACCAAA........................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGGGGCACCAAA........................................................................................................... 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCAAAGGAGGCACCA............................................................................................................. 17 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCCCTCACAGGAGGCACCA............................................................................................................. 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTCCCCTCGCAGGAGGCACCA............................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCTCACAGGAGGCACCAAAAA......................................................................................................... 21 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCTCCA............................................................................................................. 18 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCTGTCCTCACAGGAGGCACCA............................................................................................................. 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AATCCCTCACAGGAGGCACCA............................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGGACCA............................................................................................................. 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CATCTCACAGGAGGCACCA............................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGCCCTCACAGGAGGCACCA............................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCACAGGAGGCACGA............................................................................................................. 15 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCATCACAGGAGGCACCA............................................................................................................. 18 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACTCCTCACAGGAGGCACCA............................................................................................................. 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTTCCCTCACAGGAGGCACCA............................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGGGGCACCAA............................................................................................................ 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GATCCTCACAGGAGGCACCA............................................................................................................. 20 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AATTCCTCACAGGAGGCACCA............................................................................................................. 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAAACCTCACAGGAGGCACCA............................................................................................................. 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCTCACAGGAGGCACCATAA.......................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................ACTCACAGGAGGCACCA............................................................................................................. 17 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCCCACAGGAGGCACCA............................................................................................................. 18 2 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAAATATGTTGGATATCGGC......................................................................................... 20 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCATCA............................................................................................................. 18 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCTCCCCTCACAGGAGGCACC.............................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCACCAC............................................................................................................ 19 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTGACAGGAGGCACCA............................................................................................................. 18 2 8 0.25 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGAACCA............................................................................................................. 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTCCTAACAGGAGGCACCA............................................................................................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGCACCATTA.......................................................................................................... 21 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATCCTCAGAGGAGGCACCA............................................................................................................. 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGGAGGCACCACTA.......................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACACCCCTCACAGGAGGCACCA............................................................................................................. 22 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTCTCACAGGAGGCACCA............................................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCTATCCTCACAGGAGGCACCA............................................................................................................. 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATCCTCACAGGAGGCACCC............................................................................................................. 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACCCC............................................................................................................ 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TAAATCCTCACAGGAGGCACCA............................................................................................................. 22 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCAAAGGAGGCACCA............................................................................................................. 16 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGGGGCCCCA............................................................................................................. 17 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTTTCTCACAGGAGGCACCA............................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCACAGGGGGCACC.............................................................................................................. 17 2 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................CTCACCGGAGGCACCA............................................................................................................. 16 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCAGAGGAGGCACCA............................................................................................................. 18 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCACAGGAGGGACCC............................................................................................................. 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCACCATTAT......................................................................................................... 21 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AACTCACAGGAGGCACCA............................................................................................................. 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTCTCACAGGAGGCACC.............................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGATCCTCACAGGAGGCACCA............................................................................................................. 21 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCCTCACAGGGGGCACCA............................................................................................................. 19 3 17 0.12 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGGGGCACCC............................................................................................................. 17 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ATCTTGGCTACCGGCTGCGCCA.................................................................................. 22 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTCACAGCAGGCACCA............................................................................................................. 16 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCTCACAGGAGGCGCCC............................................................................................................. 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTAACAGGAGGCACC.............................................................................................................. 17 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACCCCTCACACGAGGCACCA............................................................................................................. 20 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CGAGCATAATCCAATGACC................................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................TCACCCGGGGCACCAAAAA......................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GTACCAGAAATAGGTTGGA................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCCTTCACAGGAGGCACCA............................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTCTCACAGGAGCCACCA............................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTCTCACAGGTGGCACCA............................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GGTTACCTAAGAAGGAAG................. 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AATCGCAAAGGAACTCTTC.......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCCTCACAGGAGGGACCC............................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTTCTCACAGGAGGCGCCA............................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AATATGTTACAAGTAAGTATCAGACTACGTCTGTGCAGAGTAACTTACGCCATTCATGGCTCACAGAAGTTGCTAGTGTTAGGTTACAGGTTAAGATTTGAGGAGTCAGGTTAGCGTTTCTTAGAGGAGTGTCCTCCGTGGTTTTTATACAACCTATAGCCGACGCGGTCCACGCCTCTGGGTTTGACGGGCATCTATACTACGCCGGACGCCGCACCAATGGATGGTTCCGTCGAAACTCCCAAAGCGTG
**************************************************.......(((((((((......)).))).(((((((((...........(((((.((.....((.....)).....))...)))))...........))))))))).))))(((((...(((..((....))..)))...)))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060672
9x160_females_carcasses_total
 V053
head
 V116
male body		 SRR060662
9x160_0-2h_embryos_total
 M027
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106724
embryo_12-14h
 SRR060679
140x9_testes_total
 SRR060667
160_females_carcasses_total
 SRR060657
140_testes_total
 SRR060687
9_0-2h_embryos_total
...........................................................................................................................GAGGAGTATCCCCCGTGCTT............................................................................................................ 20 3 5 0.80 4 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGGCAAATC............ 19 3 8 0.63 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGGCGGATC............ 19 3 8 0.38 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GAGGAGTATCCCCCGTGCT............................................................................................................. 19 3 11 0.36 4 0 0 2 0 0 0 1 0 0 0 0 0 0 1 0 0
......................................................................GGCTAGTGTTAGGTGGCAGGT................................................................................................................................................................ 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GAGGAGTATCCCCCGAGGTT............................................................................................................ 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AGAGGAGTATCCCCCGTG............................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGGCGGA.............. 17 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGGCGAATG............ 19 3 13 0.15 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGTCAGAT............. 18 3 20 0.15 3 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0
.......................................................................GCTCGTCTTACGTTACAGGTT............................................................................................................................................................... 21 3 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGTCGGATG............ 19 3 16 0.13 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAAATTTTAGGAGTCAGG............................................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGGCAAAAG............ 19 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GGTAGTGTTAGGTGGCAGGT................................................................................................................................................................ 20 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGGATGGTTCCGTCTAATG............ 19 3 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........ACAAGTAGTTATCAGACAAC............................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12958:777037-777287 + dvi_9683 TTATACAA-TGTTCATTCATAGT-----CTGATGCAGACACGTCT-CATTGAATGCGGTAAGTACCGAGTGTCTTCAAC-G-ATCA--CAATCCAATGTCCAATTCTAAACTCCTCAGTCCAATC-G-CAAAGAA-TCTCCTCACAGG---AGGCACCAAAAATATGTTGGATATCGGCTGCGCCAGGTGCGGAGACCCAAACTGCCCG-TAGATATGATGCGGCCTGCGGCGTGGTTACCTACC-AAGGCAGCTTTG--AGGGTTTCGCAC
droWil2 scf2_1100000000008:459-699 - TAA--CAGTTTTTCAGCCATAATGAACACCTACTCAAACACATCAACGTTAAAT---------------TGTACTCAACCGAATCGGTCTATCCACTGGC-AAT---CACCCTCTAAGTCCAATC-G-CCAAGATCATTCCTCCCGGGTTTCGGCACCAAAAATATGTTGGCTAACGGCTGCGCCCT-TGCGGAGCCCCAAACTGCTCGCTTTATATGATGCGGCCTTCGGA-TGATT-TCCACC-GAGGCGGCTTTGAGGCACTTGC----
droEle1 scf7180000489008:34186-34261 + CG-------------------------------------------------------------------------------------------------------------------------------CAACAGAAGTCTTCCGAGGTTTGGGCAACAAAAATGTGTTGGCTACTAGCTGCGTCTC-AACGGAGCCCCAATCT--------------------------------------------------------------------
droRho1 scf7180000774576:23327-23473 - TAAT-------------------------------------------------------------------------------------------------------------------CCACTCAGTCCAAGAGAAGTCTTCCCGGGTTTCGGCACCAA-AATGTGTTGGCTA-TGGCTGCGTACC-GACGGAGCCCCAATCTTCA-GCAAAATATGATGCGGCGCACAGAGTGATTATCCACCTGTGGCGACGTTG--GAAGTTCC----
droTak1 scf7180000412464:14432-14571 - CT--------------------------------------------------------------------------------------------------------------------------CAGTCCAAGAGAAGTCTTCCCGGGTTTCGGCACCAA-AATGTGTTGGCTG-TGGCTGCGTACC-GACGGAGCCCCAATCTTCA-GCAAAATATGATGCGGCGCACAGAGTGATTGTCCACCTGTGGCGGCGTTA--GAAGTTCC----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTATACAA-TGTTCATTCATAGT-----CTGATGCAGACACGTCT-CATTGAATGCGGTAAGTACCGAGTGTCTTCAAC-G-ATCA--CAATCCAATGTCCAATTCTAAACTCCTCAGTCCAATC-G-CAAAGAA-TCTCCTCACAGG---AGGCACCAAAAATATGTTGGATATCGGCTGCGCCAGGTGCGGAGACCCAAACTGCCCG-TAGATATGATGCGGCCTGCGGCGTGGTTACCTACC-AAGGCAGCTTTG--AGGGTTTCGCACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................CTCACAGG---AGGCACCA.................................................................................................................163154.6746400000000000000000000000000000000000000001000000000510006946010431
...........................................................................................................................................CCTCACAGG---AGGCACCA.................................................................................................................17353.6716100000000000000000000000000000000000000000000001010000101010010155
........................................................................................................................................TCTCCTCACAGG---AGGCACCA.................................................................................................................20136.0036001210100000000104110040033111040010012100000000000000000000020
..........................................................................................................................................TCCTCACAGG---AGGCACCA.................................................................................................................18327.67830021001101000012001111204233612381077332100000000000000000010002
............................................................................................................................................CTCACAGG---AGGCACC..................................................................................................................15310.00300000000000000000000000000000000000000000000000000000010120400022
...........................................................................................................................................CCTCACAGG---AGGCACCC.................................................................................................................1748.00320000000000000000000000000000000000000000000000000000000000000032
...........................................................................................................................................CCTCACAGG---AGGCACC..................................................................................................................1633.3310000000000000000000000000000000000000000000000100010001000030004
.........................................................................................................................................CTCCTCACAGG---AGGCACCA.................................................................................................................1913.003000000000000000000000000000000000000110100000000000000000000000
.............................................................................................................................................TCACAGG---AGGCACCA.................................................................................................................1532.006000000000000000000000000000000000000000000000000000010000100004
........................................................................................................................................TCTCCTCACAGG---AGGCACCAC................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................TCCTCACAGG---AGGCACC..................................................................................................................1730.672000000000000000000000000000000000000000000000000000000110000000
...........................................................................................................................................CCTCACAGG---AGGCACCAC................................................................................................................1840.502000000000000000000000000000000000000000000000000000000000000002
............................................................................................................................................CTCACAGG---AGGCACCAAAAA.............................................................................................................2030.331000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................CTCACAGG---AGGCACCAAAA..............................................................................................................1930.331000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................TCCTCACAGG---AGGCACCAA................................................................................................................1930.331000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................TCCTCACAGG---AGGCACCAAA...............................................................................................................2030.331001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AAAATATGTTGGATATCGGC.............................................................................................2040.251000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCCTCACAGG---AGGCACCAC................................................................................................................1940.251000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................CCTCACAGG---AGGCACCCC................................................................................................................1860.171000000000000000000000000000000000000000000000000000000000000001
droWil2
TAA--CAGTTTTTCAGCCATAATGAACACCTACTCAAACACATCAACGTTAAAT---------------TGTACTCAACCGAATCGGTCTATCCACTGGC-AAT---CACCCTCTAAGTCCAATC-G-CCAAGATCATTCCTCCCGGGTTTCGGCACCAAAAATATGTTGGCTAACGGCTGCGCCCT-TGCGGAGCCCCAAACTGCTCGCTTTATATGATGCGGCCTTCGGA-TGATT-TCCACC-GAGGCGGCTTTGAGGCACTTGC----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................CTCCCGGGTTTCGGCACCA.................................................................................................................19204.9098090800
..........................................................................TCAACCGAATCGGTCTATCCACTGGC-AA.........................................................................................................................................................................2811.00100100
.............................................................................................................................................TCCCGGGTTTCGGCACCG.................................................................................................................18200.8016140002
.....................................................................................................................................................................TGTTGGCTAACGGCTGCGCCCT-TGC.................................................................................25200.6513013000
............................................................................................................................C-G-CCAAGATCATTCCTCCCGGGTT..........................................................................................................................24200.45900090
....................................................................................................................................................................................................................................CGGA-TGATT-TCCACC-GAGGCGGCTT................25200.45909000
..............................................................................................................................................CCCGGGTTTCGGCACCAA................................................................................................................18200.30606000
.....................................................................................................................................................................TGTTGGCTAACGGCTGCGCCCT-TG..................................................................................24200.25500050
...........................................................................................................................TC-G-CCAAGATCATTCCTCCCGGGTTT.........................................................................................................................26200.20401030
..................................................................................................................................AAGATCATTCCTCCCGGGTTTCGGCAC...................................................................................................................27200.20404000
...................................................................................................................................................................TATGTTGGCTAACGGCTGCGCCCT-T...................................................................................25200.15302010
......................................................................................................................TCCAATC-G-CCAAGATCATTCCTCCCGGG............................................................................................................................28200.15303000
...................................................................................................................................................................................................................TTATATGATGCGGCCTTCGGA-TGATT-.................................26200.15300030
..................................................................................................................................AAGATCATTCCTCCCGGGTTTCGGCA....................................................................................................................26200.10202000
........................................................................................................................................................................TGGCTAACGGCTGCGCCCT-TGCGGAA.............................................................................26200.10200020
...................................................................................................................................AGATCATTCCTCCCGGGTTTCGGCA....................................................................................................................25200.10202000
............................................................................................................................C-G-CCAAGATCATTCCTCCCGGGTTTC........................................................................................................................26200.10202000
........................................................................................................................................................................TGGCTAACGGCTGCGCCCT-TGCGGAGT............................................................................27200.10200020
................................................................................................................................................................................................................................................CCACC-GAGGCGGCTTTGAGGCACT.......24200.10202000
...........................................................................................................................TC-G-CCAAGATCATTCCTCCCGGGTT..........................................................................................................................25200.10200020
.....................................................................................................................................................................TGTTGGCTAACGGCTGCGCCCT-T...................................................................................23200.10202000
.............................................................................................................................................TCCCGGGTTTCGGCACCAG................................................................................................................19200.10211000
..............................................................................................................................................................................................................TCGCTTTATATGATGCGGCCTTCGGA-.......................................26200.05101000
............................................................................................................................................CTCCCGGGTTTCGGCACCG.................................................................................................................19200.05101000
.......................................................................................................................................CATTCCTCCCGGGTTTCGGCACCA.................................................................................................................24200.05101000
TAA--CAGTTTTTCAGCCATAATGAACAC...................................................................................................................................................................................................................................................27200.05101000
............................................................................................................................................................................................................................................TT-TCCACC-GAGGCGGCTTTGAGG...........23200.05101000
...........................................................................................................................................................................................................................TGCGGCCTTCGGA-TGATT-TCCACC-GAG.......................27200.05100010
........................................................................................................................................................................................................................TGATGCGGCCTTCGGA-TGATT-.................................21200.05100010
........................................................................................................................................................................TGGCTAACGGCTGCGCCCT-TGCGGAGA............................................................................27200.05101000
............................................................................................................................................................................TAACGGCTGCGCCCT-TGCGG...............................................................................20200.05101000
...........................................................................................................................................................................CTAACGGCTGCGCCCT-TGCGGA..............................................................................22200.05101000
......................................................................................................................................TCATTCCTCCCGGGTTTCGGCACCAAAAA.............................................................................................................29200.05101000
...................................................................................................................................................................................TGCGCCCT-TGCGGAGCCCCAAAC.....................................................................23200.05101000
........................................................................................................................................................................................CCT-TGCGGAGCCCCAAACTGCT.................................................................22200.05101000
...................................................................................................................................................................TATGTTGGCTAACGGCTGCGCCCT-TTA.................................................................................27200.05101000
....................................................................................................................................GATCATTCCTCCCGGGTTTCGGCACC..................................................................................................................26200.05101000
............................................................................................................................C-G-CCAAGATCATTCCTCCCGGGTTTCG.......................................................................................................................27200.05101000
.............................................................................................................................................TCCCGGGTTTCGGCACCC.................................................................................................................18200.05100001
...........................................................................................................................TC-G-CCAAGATCATTCCTCCCGGGT...........................................................................................................................24200.05100001
................................................................................................................................................................................................................GCTTTATATGATGCGGCCTTCGGA-.......................................24200.05101000
.................................................................................................................................................GGGTTTCGGCACCAAAAATATGTTGG.....................................................................................................26200.05101000
.......................................................................................................................................................................................................................................A-TGATT-TCCACC-GAGGCGGCTTTGAG............26200.05101000
.........................................................................................................................................................................................................................................TGATT-TCCACC-GAGGCGGCTT................21200.05101000
...................................................................................................................................................................................................................................TCGGA-TGATT-TCCACC-GAGGCGGCTT................26200.05100100
......................................................................................................................................TCATTCCTCCCGGGTTTCGGCAC...................................................................................................................23200.05101000
....................................................................................................................................................................................................................................CGGA-TGATT-TCCACC-GAGGCGGCTTT...............26200.05101000
.......................................................................................................................................................CGGCACCAAAAATATGTTGGCTAACGG..............................................................................................27200.05101000
...................................................................................................................................................................................................................................TCGGA-TGATT-TCCACC-GAGGCGGCTTT...............27200.05101000
......................................................................................................................................................................GTTGGCTAACGGCTGCGCCCT-TGCGG...............................................................................26200.05101000
....................................................................................................................................GATCATTCCTCCCGGGTTTCGGCACCAAA...............................................................................................................29200.05101000
............................................................................................................................................CTCCCGGGTTTCGGCACC..................................................................................................................18200.05100001
......................................................................................................................................TCATTCCTCCCGGGTTTCGGCA....................................................................................................................22200.05100010
........................................................................................................................................................................TGGCTAACGGCTGCGCCCT-TGCGGA..............................................................................25200.05100010
.......................................................................................................................................................................................................AAACTGCTCGCTTTATATGATGCGGC...............................................26200.05100010
..................................................................................................................................AAGATCATTCCTCCCGGGTTTCGG......................................................................................................................24200.05101000
..............................................................................................................................................CCCGGGTTTCGGCACCTG................................................................................................................18200.05110000
..............................................................................................................................................CCCGGGTTTCGGCACCAAT...............................................................................................................19200.05101000
.........................................................................................................................................................................................................................................TGATT-TCCACC-GAGGCGGCTTTGAA............25200.05101000
.............................................................................................................................................................................................................................................T-TCCACC-GAGGCGGCTTTGAGGCACT.......26200.05110000
...............................................................................................................................................................................................................................................TCCACC-GAGGCGGCTTTGAGGCACTTA.....27200.05101000
.......................................................................................................................................................................................CCCT-TGCGGAGCCCCAAACTGCTCGC..............................................................26200.05100010
droEle1
CG-------------------------------------------------------------------------------------------------------------------------------CAACAGAAGTCTTCCGAGGTTTGGGCAACAAAAATGTGTTGGCTACTAGCTGCGTCTC-AACGGAGCCCCAATCT--------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TAAT-------------------------------------------------------------------------------------------------------------------CCACTCAGTCCAAGAGAAGTCTTCCCGGGTTTCGGCACCAA-AATGTGTTGGCTA-TGGCTGCGTACC-GACGGAGCCCCAATCTTCA-GCAAAATATGATGCGGCGCACAGAGTGATTATCCACCTGTGGCGACGTTG--GAAGTTCC----SizeHit CountTotal NormTotal
No Reads
droTak1
CT--------------------------------------------------------------------------------------------------------------------------CAGTCCAAGAGAAGTCTTCCCGGGTTTCGGCACCAA-AATGTGTTGGCTG-TGGCTGCGTACC-GACGGAGCCCCAATCTTCA-GCAAAATATGATGCGGCGCACAGAGTGATTGTCCACCTGTGGCGGCGTTA--GAAGTTCC----SizeHit CountTotal NormTotal
No Reads

Generated: 05/16/2015 at 09:53 PM