dvi_9679

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TGATATAGCTTCGCATCAGACAGATTTTAGAAGAATCAGATCAGAATCAAAACGTGGCAGACGACGAATCGAAATGGAAAACGTCGGAAATCCATTGCGCAACTATGTGGTTCAATGGACCGCCATTTTTGTATCTAGAAGAATCGCAGTGGCCACACACGAAAACAGGCCCTGCAATAAATATGTTGTACCATTCTGAAGAACAATTCAATCACACGTCGTCCTGGAGATGTTTCATGCCGGATCTGCAG ************************************************...((((....(((((..((......))...))))).....((((((((.......(((((((...))))))).((((((........)))))))))))))))))).........((((...(((((((....)))))))....))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V116 male body	SRR060685 9xArg_0-2h_embryos_total	SRR060656 9x160_ovaries_total	SRR060663 160_0-2h_embryos_total	SRR060679 140x9_testes_total	SRR060684 140x9_0-2h_embryos_total	SRR060686 Argx9_0-2h_embryos_total
.............CATCAGACAGACTTTGGAAGA.........................................................................................................................................................................................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
.........................................................AAGACGACGAATCGAAAT................................................................................................................................................................................	18	1	2	0.50	1	0	1	0	0	0	0	0
....................................................................................................................................ATCTAGAAGAATCGCAGTGGC..................................................................................................	21	0	20	0.05	1	0	0	0	0	0	0	1
............................................................................................................................................................................................................................GTCCTGGAGTTGATTGATG............	19	3	20	0.05	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................ATCACACGTCGTCCTGGAGAT....................	21	0	20	0.05	1	0	0	0	0	1	0	0
.................................................................................................................................TGTATCTAGAAGAATCGCAGT.....................................................................................................	21	0	20	0.05	1	0	0	1	0	0	0	0
.................................................................................................................................................................................................................AATCACACGTCGTCCTGGAGA.....................	21	0	20	0.05	1	0	0	0	0	0	1	0

ACTATATCGAAGCGTAGTCTGTCTAAAATCTTCTTAGTCTAGTCTTAGTTTTGCACCGTCTGCTGCTTAGCTTTACCTTTTGCAGCCTTTAGGTAACGCGTTGATACACCAAGTTACCTGGCGGTAAAAACATAGATCTTCTTAGCGTCACCGGTGTGTGCTTTTGTCCGGGACGTTATTTATACAACATGGTAAGACTTCTTGTTAAGTTAGTGTGCAGCAGGACCTCTACAAAGTACGGCCTAGACGTC ************************************************...((((....(((((..((......))...))))).....((((((((.......(((((((...))))))).((((((........)))))))))))))))))).........((((...(((((((....)))))))....))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	SRR060663 160_0-2h_embryos_total	GSM1528803 follicle cells	M027 male body	SRR060668 160x9_males_carcasses_total	SRR060685 9xArg_0-2h_embryos_total	SRR060679 140x9_testes_total	SRR1106722 embryo_10-12h
...........................ATCTTCTTAGTCTAGTCTTAGTTTTG......................................................................................................................................................................................................	26	0	1	1.00	1	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GCTAAGTTAGTGTACAGCA.............................	19	2	2	0.50	1	0	0	1	0	0	0	0	0
.........................................................................TACCCTTTGCAGACTTTAG...............................................................................................................................................................	19	2	2	0.50	1	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................CGACGAAGTAAGGCCTAGAC...	20	3	4	0.25	1	1	0	0	0	0	0	0	0
..................................................TTGCATAGTCTGCTGCTCA......................................................................................................................................................................................	19	3	15	0.20	3	0	0	0	1	1	1	0	0
.......................................................................................................................CGCGATAACAACATAGATC.................................................................................................................	19	3	20	0.05	1	0	1	0	0	0	0	0	0
........................................................................................ATAGGTAACGCGTTG....................................................................................................................................................	15	1	20	0.05	1	0	0	0	0	0	0	0	1
..............................TTCTTAGTCTAGCCTTCT...........................................................................................................................................................................................................	18	3	20	0.05	1	0	0	0	0	0	0	1	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12958:659314-659564 +	dvi_9679	TGAT--ATAGC--TTCGCATCAGACAGATTTTAGAAGAATCAGAT------------------------CAGAATCAAAACGTGGCAGACGACGAATCGAAATGGAAAA---CGTCGGAAATCCATTGCGCAACTATGTGGTTCAATGGACCGCCATTTTTGTATCTAGAAGAATCGCAGTGGCCACAC-ACGAAAACAGGCCC---------TGC--AATAAATATGTTGTACCATTCTGAAGAACAATTCAATCACACGTCGTCCTGGAGATGTTTCATGCCGGATCTGCAG
droWil2	scf2_1100000006827:373-632 -		CG---------------TGTTGGAGAAATTCTAAAAGACTTTGACGTACTATCTTGGTGAT--------ATGATGCATAACGTTGCAGACGATGGCACGAAATGGGCAAAGATGCCAGACATGACCGGGAATTCAAGGTGGTTTGTTGGCCCGAGATTCTTGTATGAACAAGAGACACAATGGCCTATCATGGAGCAGAGCCCGAGCAAGA---CGAGTGAAAGTATCTTGAACCACGAGTAGAAAGTAAA-AAGGAA-------CTCTAGTTTGCATCACACCTGATCCGGAA
droAna3	scaffold_12947:1088840-1089118 -		C------------TACGAGTCGGAGAAATCCTGGAAGGATCGGAGATTGTCGATTGGCGCTGGATACCTTCGGAGCTTAATGTGGCGGACGAAGGAACCAAATGGACAAAAAACTGTGAAATGACCAGCTCGATAAGGTGGTTTACTGGTCCCGAATTCTTATTGCAGAACGAGTCAAGATGGCCGTCA-CAAATCGGAACCGCTGTGAGCTCCGA--TGATACACTGCTGTATCACGCATATATGGTGCGGATGGACCCGTCACCTATTGCCTCTATTATGCCAAATCCGCTA
droKik1	scf7180000297786:21960-22235 +		TGG--------CTTACGTATTGGAGAGATTCTTGAAGAATCTGAGATTGAAGATTGGCGCTGGGTACCTTCGGAACAGAATGTGGCGGATGAAAGGACCAAATGGACTAAGAATTGCGAAATAAACAGCTCAGGAAGATGGTTTACTGGCCCGGAATTTTTATTGCAG-------CTCAGTGGCCATCG-CGAACAGGAGTTCACATTAGTAGCGA--GTGTGAACTAATGTACCATGATGAGGAAACGTGGGTGAACAAGTCACCTTTTGATTCGATTATGCCGGATCCGTTG
droRho1	scf7180000776979:11098-11383 -		TG-----TAGCTTTACGAGTCGGAGAAATTCTTGAAGGCTCCGAAGTTGGTGAATGGCGCTGGGTACCCTCGGAACAAAATGTAGCAGACGATGGGACTAAACGAACAAAAAGTGTTGAGAGAAATAGTTCAATTCGATGGTTTTCCGGACTGAATTATCTGTTTCAAGATGAATCGGAGTGGCCACGC-GGAAATGAAATGTCTAAAACCAGAGA--AACTCAAGTATTGTACCACAAGGAGAAAATTAAGAAACAAATCTCGCCTTTGTCATGTGTAATGCCGGATTCACTA
droTak1	scf7180000413361:7012-7302 -		CGATTCGTAGCTTTGCGGGTCGGAGAAATTCTTGAAGGTTCCGAAGTTGGTGAATGGCGCTGGGTACCCTCGGAACTAAATGTAGCGGATGATGGTACAAAATGGTCAAAAGGTGTTGAGGTAAATAGTTCAATACGATGGTTTTCCGGACCGAATTATCTGTTGCAGGATGAGTCGGAGTGGCCACTC-GGAAAAGAAATATCTAAAGCCAGAGA--GACTCAAGTGTTGTACCACAAGGAGGAAAGTAAGAAACAGGTCTCGCCGCTGGCATCTGTTATGCCGGATCCATTA
droEre2	scaffold_4929:25547088-25547101 -		TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGATCTACAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

TGAT--ATAGC--TTCGCATCAGACAGATTTTAGAAGAATCAGAT------------------------CAGAATCAAAACGTGGCAGACGACGAATCGAAATGGAAAA---CGTCGGAAATCCATTGCGCAACTATGTGGTTCAATGGACCGCCATTTTTGTATCTAGAAGAATCGCAGTGGCCACAC-ACGAAAACAGGCCC---------TGC--AATAAATATGTTGTACCATTCTGAAGAACAATTCAATCACACGTCGTCCTGGAGATGTTTCATGCCGGATCTGCAG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...................................................................................................................................................................ATCTAGAAGAATCGCAGTGGC..............................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................ATCACACGTCGTCCTGGAGAT....................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TGTATCTAGAAGAATCGCAGT.................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................AATCACACGTCGTCCTGGAGA.....................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droWil2

CG---------------TGTTGGAGAAATTCTAAAAGACTTTGACGTACTATCTTGGTGAT--------ATGATGCATAACGTTGCAGACGATGGCACGAAATGGGCAAAGATGCCAGACATGACCGGGAATTCAAGGTGGTTTGTTGGCCCGAGATTCTTGTATGAACAAGAGACACAATGGCCTATCATGGAGCAGAGCCCGAGCAAGA---CGAGTGAAAGTATCTTGAACCACGAGTAGAAAGTAAA-AAGGAA-------CTCTAGTTTGCATCACACCTGATCCGGAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
............................................................................................TGGCACGAAATGGGCAAAGATGCCAGA...............................................................................................................................................................................	27	4	0.25	1	0	0	0	1	0
.............................................................................................................................................................TCTTGTATGAACAAGAGACACAATGGC..............................................................................................................	27	20	0.15	3	0	3	0	0	0
..........................................................................................................CAAAGATGCCAGACATGACCGGGAAT..................................................................................................................................................................	26	16	0.06	1	0	1	0	0	0
........................................................................................................................ATGACCGGGAATTCAAGGTGG.........................................................................................................................................................	21	16	0.06	1	0	0	0	0	1
..............................................................................................................GATGCCAGACATGACCGGGA....................................................................................................................................................................	20	17	0.06	1	0	1	0	0	0
.............................................................................................................AGATGCCAGACATGACCGG......................................................................................................................................................................	19	18	0.06	1	0	0	0	0	1
..................................................................................TTGCAGACGATGGCACGAAATG..............................................................................................................................................................................................	22	19	0.05	1	0	1	0	0	0
.............................................................................TAACGTTGCAGACGATGGCACGAAA................................................................................................................................................................................................	25	19	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................AGCCCGAGCAAGA---CGAGTGAAAG......................................................................	23	19	0.05	1	0	1	0	0	0
..................................................................................................................................ATTCAAGGTGGTTTGTTGGCCCGA............................................................................................................................................	24	19	0.05	1	0	1	0	0	0
................................................................................................................................GAATTCAAGGTGGTTTGTTGG.................................................................................................................................................	21	19	0.05	1	0	0	1	0	0
.............................................................................TAACGTTGCAGACGATGGCAC....................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................CTTGTATGAACAAGAGACACAATGGCC.............................................................................................................	27	20	0.05	1	0	1	0	0	0
................................................................................................................................................................TGTATGAACAAGAGACACAATGGCC.............................................................................................................	25	20	0.05	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................TTGCATCACACCTGATCCGGA.	21	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................TCTTGTATGAACAAGAGACACAATGGCC.............................................................................................................	28	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................GTATGAACAAGAGACACAATGG...............................................................................................................	22	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................TCTTGTATGAACAAGAGACACAATGG...............................................................................................................	26	20	0.05	1	0	1	0	0	0
................................................................................................................................................GTTGGCCCGAGATTCTTGTATGAACAAG..........................................................................................................................	28	20	0.05	1	0	1	0	0	0
...............................................................................................................................................TGTTGGCCCGAGATTCTTGTATGAAC.............................................................................................................................	26	20	0.05	1	0	0	0	1	0

droAna3

C------------TACGAGTCGGAGAAATCCTGGAAGGATCGGAGATTGTCGATTGGCGCTGGATACCTTCGGAGCTTAATGTGGCGGACGAAGGAACCAAATGGACAAAAAACTGTGAAATGACCAGCTCGATAAGGTGGTTTACTGGTCCCGAATTCTTATTGCAGAACGAGTCAAGATGGCCGTCA-CAAATCGGAACCGCTGTGAGCTCCGA--TGATACACTGCTGTATCACGCATATATGGTGCGGATGGACCCGTCACCTATTGCCTCTATTATGCCAAATCCGCTA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................................................TACCTTCGGAGCTTAATGTGGCGGAC............................................................................................................................................................................................................	26	13	0.23	3	3	0	0	0	0	0
......................................................................................................................................................................................GCCGTCA-CAAATCGGAACCGCTGTGAGC...................................................................................	28	5	0.20	1	1	0	0	0	0	0
.........................AAATCCTGGAAGGATCGGAGATTGT....................................................................................................................................................................................................................................................	25	5	0.20	1	1	0	0	0	0	0
.................................................................................................................................TCGATAAGGTGGTTTACTGGTCCCG............................................................................................................................................	25	6	0.17	1	1	0	0	0	0	0
................................................................................................................................................................TATTGCAGAACGAGTCAAGATGGCCGT...........................................................................................................	27	6	0.17	1	1	0	0	0	0	0
.......................................................................................................................................................................................................ACCGCTGTGAGCTCCGA--TGATACACT...................................................................	26	7	0.14	1	1	0	0	0	0	0
................................................................................................................................................................TATTGCAGAACGAGTCAAGATGGCCGC...........................................................................................................	27	7	0.14	1	0	1	0	0	0	0
............................................................................................................................................................TTCTTATTGCAGAACGAGTCAAGATGGC..............................................................................................................	28	7	0.14	1	0	1	0	0	0	0
............................TCCTGGAAGGATCGGAGATTGTC...................................................................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0	0
................................................................................................................................................................TATTGCAGAACGAGTCAAGATGGCC.............................................................................................................	25	7	0.14	1	1	0	0	0	0	0
.........................................................................................................................................................................................................CGCTGTGAGCTCCGA--TGATACACTGC.................................................................	26	7	0.14	1	1	0	0	0	0	0
.......................................................................................................................................................................................................ACCGCTGTGAGCTCCGA--TGATAC......................................................................	23	7	0.14	1	1	0	0	0	0	0
........................................CGGAGATTGTCGATTGGCGCTG........................................................................................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0	0
........................................................................................................................................................................AACGAGTCAAGATGGCCGTCA-CAA.....................................................................................................	24	8	0.13	1	1	0	0	0	0	0
......................................................TGGCGCTGGATACCTTCGGAGC..........................................................................................................................................................................................................................	22	16	0.13	2	1	1	0	0	0	0
......................................ATCGGAGATTGTCGATTGGCGCTGG.......................................................................................................................................................................................................................................	25	8	0.13	1	0	1	0	0	0	0
........................................................................GAGCTTAATGTGGCGGACGAAGG.......................................................................................................................................................................................................	23	9	0.11	1	1	0	0	0	0	0
.............................................ATTGTCGATTGGCGCTGGATACCTTC...............................................................................................................................................................................................................................	26	9	0.11	1	1	0	0	0	0	0
............................................................................................................................................................................AGTCAAGATGGCCGTCA-CAAA....................................................................................................	21	9	0.11	1	1	0	0	0	0	0
.............................................ATTGTCGATTGGCGCTGGATACCTTCG..............................................................................................................................................................................................................................	27	9	0.11	1	1	0	0	0	0	0
............................................GATTGTCGATTGGCGCTGGATACCTT................................................................................................................................................................................................................................	26	9	0.11	1	1	0	0	0	0	0
...........................................AGATTGTCGATTGGCGCTGGA......................................................................................................................................................................................................................................	21	9	0.11	1	1	0	0	0	0	0
...........................................AGATTGTCGATTGGCGCTGGATA....................................................................................................................................................................................................................................	23	9	0.11	1	1	0	0	0	0	0
..............................................................................................GAACCAAATGGACAAAAAACTGTGAAAT............................................................................................................................................................................	28	10	0.10	1	0	1	0	0	0	0
.....................................................................................................ATGGACAAAAAACTGTGAAATGAC.........................................................................................................................................................................	24	11	0.09	1	1	0	0	0	0	0
.....................................................................................................ATGGACAAAAAACTGTGAAATGACCAG......................................................................................................................................................................	27	11	0.09	1	1	0	0	0	0	0
.....................................................................................................ATGGACAAAAAACTGTGAAATGACCAGC.....................................................................................................................................................................	28	11	0.09	1	1	0	0	0	0	0
....................................................................................................AATGGACAAAAAACTGTGAAATGACC........................................................................................................................................................................	26	11	0.09	1	1	0	0	0	0	0
.....................................................................................................ATGGACAAAAAACTGTGAAATGACC........................................................................................................................................................................	25	11	0.09	1	0	1	0	0	0	0
.....................................................................................................ATGGACAAAAAACTGTGAAATGACCA.......................................................................................................................................................................	26	11	0.09	1	1	0	0	0	0	0
..............................................TTGTCGATTGGCGCTGGATACC..................................................................................................................................................................................................................................	22	12	0.08	1	1	0	0	0	0	0
..............................................TTGTCGATTGGCGCTGGATACCTTCG..............................................................................................................................................................................................................................	26	12	0.08	1	1	0	0	0	0	0
...............................................TGTCGATTGGCGCTGGATACCTTCGG.............................................................................................................................................................................................................................	26	12	0.08	1	1	0	0	0	0	0
..............................................TTGTCGATTGGCGCTGGATACCTTCGGA............................................................................................................................................................................................................................	28	12	0.08	1	1	0	0	0	0	0
................................................................TACCTTCGGAGCTTAATGTGGCG...............................................................................................................................................................................................................	23	13	0.08	1	1	0	0	0	0	0
..............................................................GATACCTTCGGAGCTTAATGTGGC................................................................................................................................................................................................................	24	13	0.08	1	1	0	0	0	0	0
............................................................TGGATACCTTCGGAGCTTAATGTGGCG...............................................................................................................................................................................................................	27	13	0.08	1	1	0	0	0	0	0
.............................................................GGATACCTTCGGAGCTTAATGTGGCGG..............................................................................................................................................................................................................	27	13	0.08	1	1	0	0	0	0	0
...........................................................CTGGATACCTTCGGAGCTTAATGTG..................................................................................................................................................................................................................	25	13	0.08	1	1	0	0	0	0	0
.............................................................GGATACCTTCGGAGCTTAATGT...................................................................................................................................................................................................................	22	13	0.08	1	1	0	0	0	0	0
......................................................TGGCGCTGGATACCTTCGGAGCTTAATG....................................................................................................................................................................................................................	28	14	0.07	1	1	0	0	0	0	0
...................................................GATTGGCGCTGGATACCTTCGGAGCT.........................................................................................................................................................................................................................	26	15	0.07	1	1	0	0	0	0	0
...................................................GATTGGCGCTGGATACCTTCGGA............................................................................................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0

droKik1

TGG--------CTTACGTATTGGAGAGATTCTTGAAGAATCTGAGATTGAAGATTGGCGCTGGGTACCTTCGGAACAGAATGTGGCGGATGAAAGGACCAAATGGACTAAGAATTGCGAAATAAACAGCTCAGGAAGATGGTTTACTGGCCCGGAATTTTTATTGCAG-------CTCAGTGGCCATCG-CGAACAGGAGTTCACATTAGTAGCGA--GTGTGAACTAATGTACCATGATGAGGAAACGTGGGTGAACAAGTCACCTTTTGATTCGATTATGCCGGATCCGTTG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TG-----TAGCTTTACGAGTCGGAGAAATTCTTGAAGGCTCCGAAGTTGGTGAATGGCGCTGGGTACCCTCGGAACAAAATGTAGCAGACGATGGGACTAAACGAACAAAAAGTGTTGAGAGAAATAGTTCAATTCGATGGTTTTCCGGACTGAATTATCTGTTTCAAGATGAATCGGAGTGGCCACGC-GGAAATGAAATGTCTAAAACCAGAGA--AACTCAAGTATTGTACCACAAGGAGAAAATTAAGAAACAAATCTCGCCTTTGTCATGTGTAATGCCGGATTCACTA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CGATTCGTAGCTTTGCGGGTCGGAGAAATTCTTGAAGGTTCCGAAGTTGGTGAATGGCGCTGGGTACCCTCGGAACTAAATGTAGCGGATGATGGTACAAAATGGTCAAAAGGTGTTGAGGTAAATAGTTCAATACGATGGTTTTCCGGACCGAATTATCTGTTGCAGGATGAGTCGGAGTGGCCACTC-GGAAAAGAAATATCTAAAGCCAGAGA--GACTCAAGTGTTGTACCACAAGGAGGAAAGTAAGAAACAGGTCTCGCCGCTGGCATCTGTTATGCCGGATCCATTA	Size	Hit Count	Total Norm	Total
No Reads

droEre2

TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGATCTACAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dvi_9679

scaffold_12958:659364-659514 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-37.3	-36.9	-36.9