dvi_9645

Name	Class	Family	Strand
Helitron-1N1_DVir	RC	Helitron	+

Species	Coordinate	ID	Alignment
droVir3	scaffold_12952:216807-217057 -	dvi_9645	GGCTAGATCGACTCGGCTATGGGTGCTGATCAAGAATATGT----ATACTTTATGGGGTCGAAG-ATGCTTCCTTCTGCCTGTTACATACATTTGGATTTTGCACAAATACAATATATCCTTAT-ACCCATTTTTAATGGGTTCAGGGTATAAAAATTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCTTT-----AT-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAAA-GTTTGGCA
droMoj3	scaffold_6540:3563978-3564194 -		GGCTATATCGACTCAGCTCGTCGTCCTGATCAAGAATATAT----ATACTTTATGGGGTCTGCG-ATGATTCCTTCTGCCTGTTACATACT-------TTTC-ACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAAAAATATTTA----------TA--CA------------------------------------------------------------TTCATT-----A-------------------------------------------TCTTAAACATGTCT------CAAGAT------------------------------------------------------------------------------------------------------------AACAATA---------------------------------------GA------------------------------------------CAAC-AA-TAAT------------AGT----------------------------------------------------ATGGTAAAAAG-ATT----T
droGri2	scaffold_15245:15655042-15655283 -		GGCTATATCGACTCAGCTGTTGATCGTGATTAAGAATATACATATATACTTAATGTGGTCAGAG-ATGCTCCCTTTTGCTTGTTACATAGA-------TTTGCACAAAACCATTATACGCTGTT-ACTCATTCTCAATGGGTTCAGGGCATACAAATAAATTT-------CATA--CATCGACGGCAAGTTAAAAAATTG---------------------------ATT--G---C-------------CTTT-------------TT------------------------CATTTAACTTATTT------CA--------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------CTATTCAACTT--------------------TT-----TAGC-----------------------------------------------------------TAACGAAAGAT-A-----TT
droWil2	scf2_1100000004909:11328261-11328487 -		GGCTAGATCGACTCGGTTGTTGATCCTGATCAAGAATATAT----ATACTTTGTGGGGTCGGAG-ATGCTTCCTTCTGCCTGTTACATACA-------TTTTGGCGACTTTAATATACCATTTC-ACCC------TATGGGTGTATGGTATAAAAATTGATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TTTT------------TCTTGCATAAGATTAGTTTCATTTTGCGCAGTGTAAAGCAACATACGCACACAAGCAA-G------T
dp5	4_group3:3079631-3079865 -		GGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATAT----ATACTTTATGGGGTCGGAA-ACGATTCCTTCTGGACGTTACACACATACACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTATCGGCTATAAAAATCTGTAATTTCTCCG--------------------------------------CCAA--AGCA---------GT-CAG-------------CTATTGT---CACGGTATCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAGCTTTCGTCA-CG----------------------------------------------------------CTGC--------------AT-------------------------------------------CAGACACTAGA-GTTTGG-C
droPer2	scaffold_103:63941-64175 +		GGCTTAATCGACTCGGCTATTGATGCTGATCAAGAATATAT----ATACTTTATGGGGTCGGAA-ACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTATCGGGTATAAAAATGCTCT-------GAT-AGT--G------------------------------------------------AAG-CGTTAGTCTGATT-----AA-----------------------------------GTTATTGCATGAAAGCTGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------CGGCGGG-AAGT------------AGTGCC-------------------------------------------------TAAATGTACAA-ATCTGGCA
droAna3	scaffold_13089:221302-221527 +		GCTCATATCGACTCAGGAGGTGATCTTGATCAAGAATATAT----TTACTTTATAGGGTCGGCG-ATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATCATAATACCCTCT-------------GC-----AAGGGTATAAAAATATACT-------GATTAGT--GTAAGA----------------------------------G--------------AATG-------------------------------------------------------------------TCT------GAATA-------------------------------------TAATA-TT-------------------------------------------------------------------------CTCTA-----------------------------TCATGTTTTTATACCCTTGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGCCAAAAGT-GTGTGTTA
droBip1	scf7180000396137:9528-9736 -		GCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAG-ATGTCTCCTTCACTGCGTTGCACACT-------TTTGGACAAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAATGAAACA-------G-----------------------------CTCGCTCGGATAA---------------AA-CG----------------------------------------------------------------------------------------TTTTATTGGACTGACGC-------------------------------------------------------------------------------------CTTAACATAATCGTTCTA-------------------------------------------------------------------------------------CG-----TTGC-----------------------------------------------------------TAAATAAAGAC-GTTTA--G
droKik1	scf7180000302189:4318-4535 +		GGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAA-ACGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTGC--------------------AAGGGTATAAAAATTATATTT-----G---AGTTAAT---TTCGACAA-------------------------------------GC-CG-------------------------------------------CTGTTTTAATGTCATTACATTAAATTAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CT------------------------------------------CAGATAA-AGGA------------ACCGCTTT-----------------------------------------------TAGATAAAAAA-GA----TT
droFic1	scf7180000449635:10197-10419 +		ACATTTTTCGACTCAGCTGGTGATGCTGATCAAGAATATAT----ATACTTTATGGGGTCTAAG-GTGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTTTT-GCTC------TGC-----AAGGGTATACAAATCAAATTT----------------------------------------------TACAGGA-G--------AAG-CTTTTCCT--------TTATTTT-------------CGTATTTCGGT-----------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTG---------------------------------------TG--------------------CGAT----------------------TGCAGTATTTCCATGC-----------------------------------------------------------AAATGAAAAAAAATT---TG
droEle1	scf7180000491008:1885948-1886162 +		GGCTAGATCGACTCGCCTAGTGATGCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAG-ATGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTCT-------------GC-----AAGGGTATAAACATAAATTC-------GG----------------------------------------------------------------------------------------------------------------------------------TGTCCTGGGCTTAGATTTGTTTTACTTTAGTTACAC---------------------------------------------------------------------------------------CCATTTTTA---------------------------------------AG--------------------CTGT----------------------TAT-ATAT-----ACC-----------------------------------------------------------TAAACTAACAA-GCCTTACA
droRho1	scf7180000770886:420-657 -		GGCTAGATCGACTCGGCTAGTGATCCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAA-ACGCTTCCTTCTACCTGTTACATACT-------TTTGCACGAATACAATATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAAGTTATGTT-------G------TTGCCCGCAACTAGAAA-CTG-CCTG----------------------------------------------------------------------------------GTCTGT-------------------------A-------------------------------------CAATA-TT-------------------------------------------------------ATTAATATTATTTTTGCATCGCA-------------------------------------------------------------------------------------GA-----TGTT------------ATATAAAA-----------------------------------------AAAAGTAAT-GTTGGGCG
droBia1	scf7180000302075:5100421-5100637 +		GGCTGGATCGGCTCGGCTAGTGATCCTGATCAACAACATAT----ATACTTTATGGGGACGGAA-ACGCTTCCTTCTACCTGTTACATACT-------TTCCGACAAATCTACTGTACCCTTTT-GCTC------TACGAGTTACGGGTATAATAACAACTT-------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTATTCATTATA-------------------------------------------------------------------------------------CA-----TTTT------------TCATAAGA----CATGTTCAGATTGACAAAGTAGAA-GCTC------CAAATTAAAAA-G-------
droTak1	scf7180000413633:7934-8163 +		GGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAATATAT----ATACTTTATGGGGTCGGAA-ACGCTTCCTTCTAGCTGTTACATACT-------TTTGCACGAATCTAATATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAATATAATGT----------------------------------------------TAA---------------AATTT--------TTCACCCTATTGTTCTTATG------------------------------------GG--------------------------------------------------------------------------------------------------------------------------------AGCTATC----------------------------------GGCA-CGCGCTTTTACCCT-------------------------------AATCAA-GGGT------------AAT----------------------------------------------------CAAATAATAAG-ATTTG--G
droEug1	scf7180000408193:10115-10351 +		GGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAAAAAGCTTCCTTCTATCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAATTACAAACG--------TGC--CAAAAT----------------------------------AAACTTCTAAAACTA-------------------------------------------TTA--------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATCTAC------------------------------CATATTACA-----------------CA-------AGCACTAACTACG---------------TGCATGAAATGTCTG-----------------------------------------------GAG-TCCAAA-----CGGTA
dm3	chrX:22326287-22326500 +		GGCCAGGTCGACTCCGCTGTTGATTCTGATCAAGAATATAT----AAACTTTATATAGTCGGAA-TAGCTTCCTTCTGCTGGTTATATACT-------TTTCGACGAATCTAGTGCACTTTTTA-ACTC------TATGAGTAAGGGGTATAATGAACTCCA-------GAT-------------------------TTA---------------------------ATC-CG-----------------TTTTCCTAATT---------------------------------------GTTGTCTTCGGGACAAGCTTGCT------------------------------------------------------------------------------------------------------------TT-------A--------------------------------C-----------------------------------------------------A-----T--T-----------------------------------------------------------TTATAAAAAAA-ATTTAACT
droSim2	x:125385-125624 +		GGCCAGATCGTCTCGGTTATTGATCCTGATCAAAAATATTT----TTACTTTATATTGTCTTAA-ACGCTTTCTATTGTCTGTTACACACT-------TTTCAAATAATCTAATATACCCTTTT-ACTC------TACGAGTAACGGGTACAAATAACGGGTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAAAGATGAAATTGATTACTGGTTGATAAACATGACACTA-TCGTCAC-TTTATACTTCTTA-------------------------------------------------------------------------------------CT-----TTTT------------TTATATAAAAAATTTATTTGAA----------------------------------------T-GAA
droSec2	scaffold_42:123981-124200 +		GGCTAGATCGACTCGGCTATTGATC------GGCTAT-TGA----CTACTTTATGTAGTCGGAA-ACGTTTCCTTCTGCCTGTTACATACT-------TTTCAACGAATCTAGTATACTCTAT--AC---------------------TATAAAGAGCTGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGATACAATGGTAACGCATTTATCGGTGCAGATATATCGTTTCTTTATCAGGTATCATTACAGAGAAGGCGG-------------------------------------------------------------------------------------------------------------------------------------GAT------------ACT----------------------------------------------------GACCGGAAAAC-GTATAG-C
droYak3	v2_chrUn_5405:194286-194521 +		GGTCATATCGACTCGGCTATTGGTCCTGATCAAGAATATAT----ATACTTTATATGGTCGGAA-ACCCTTCCTTCTGCCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAATCACTC-------GAA--------------------------------------CAG--AGCA---------GA-CACT--------------------------------------------------------------------------------------CT------------------------------------------------------------------------------------------------------------GT-------------------ACTTAACTGAATTCTGGTTAAAGTTATTATA---------AAGGTAT----------------------TATAATATACTGATCG-----------------------------------------------------------TAAGAAAACAA-AGTTGGCA
droEre2	scaffold_4929:20673339-20673553 +		GGCCAGTTCGACTCAATTATTGATTCTGATTCAGAATATAT--ATGTACTTTATATGGTCGGAA-ATGCTTTCTTCTACCTGTTACATATT-------TTTCAACGAATCTAGTATACCCTTTT-ACTT------C---AGTAACGGGTATAAAAAGAGAGA----------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACGCTA-TAGTCCCATTTCTCGACTATCAGATACCCGTTA--------------------CT------------------------------------------CAGCTAA-TGGT------------AGT----------------------------------------------------GCAATGAAAAA-AT-----T

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

GGCTAGATCGACTCGGCTATGGGTGCTGATCAAGAATATGT----ATACTTTATGGGGTCGAAG-ATGCTTCCTTCTGCCTGTTACATACATTTGGATTTTGCACAAATACAATATATCCTTAT-ACCCATTTTTAATGGGTTCAGGGTATAAAAATTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCTTT-----AT-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAAA-GTTTGGCA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.......................................................................................TACATTTGGATTTTGCACAAATACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	10.80	216	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	216	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTC.......................................................................................................................................................................................................................................................................................................................................................................................	27	5	8.40	42	0	0	0	0	0	6	0	0	0	2	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	24	0	0	2	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AGATCGACTCGGCTATGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-ATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	5.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	5	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAGATCGACTCGGCTATGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	4.50	9	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	3.00	6	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................TTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCT.............................................................................................................................................................................................................................................................................................................................................................................................	26	2	3.00	6	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TGCTGATCAAGAATATGT----ATACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	2.60	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	39	1	4	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................	24	5	2.60	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	6	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-ATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	2.50	5	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGT----ATACTTTATGGGGTCGAAG-ATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................	27	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCT.............................................................................................................................................................................................................................................................................................................................................................................................	25	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	2.33	7	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATT.........................................................................................................................................................................................................................................................................................................................................................................................	25	5	2.20	11	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	7	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GATCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AGATCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TCGACTCGGCTATGGGTGCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................T-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATC..........................................................................................................................................................................................	26	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................TTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGC..............................................................................................................................................................................................................................................................................................................................................................................................	25	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAGATCGACTCGGCTATGGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGGTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TATGGGTGCTGATCAAGAATATGT----ATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAGATCGACTCGGCTATGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGGTGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	1.50	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................AAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------AC.........................................................................	27	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................TTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTG............................................................................................................................................................................................................................................................................................................................................................................................	27	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGT----ATACTTTATGGGGTCGAAG-ATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTATGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	1.40	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	22	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................	23	5	1.20	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......ATCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GATCGACTCGGCTATGGGTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	1.00	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TATGGGTGCTGATCAAGAATATGT----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TATGT----ATACTTTATGGGGTCGAAG-ATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TCGACTCGGCTATGGGTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CA.................................................................................................	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TTCAGGGTATAAAAATTGGATACTT---GA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GACTCGGCTATGGGTGCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-ATGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................TTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CG...............................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTG............................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGGGTGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................T-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCAG.............................................................................................	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GCTATGGGTGCTGATCAAGAATATGT----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TCGACTCGGCTATGGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TATGGGTGCTGATCAAGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................ATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CA.................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TCGACTCGGCTATGGGTGCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TAAAAATTGGATACTT---GAT-------------CG----------------------ATAC-----A---------....................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AGATCGACTCGGCTATGGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAA...........	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAGATCGACTCGGCTATGGGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAA.............	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................ACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTC.......................................................................................................................................................................................................................................................................................................................................................................................	26	5	0.80	4	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-ATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	0.75	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TATGT----ATACTTTATGGGGTCGAAG-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TCAGGGTATAAAAATTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCAAGAATATGT----ATACTTTATGGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTATGGGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.65	13	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	3	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAGATCGACTCGGCTATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	0.60	3	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTT........................................................................................................................................................................................................................................................................................................................................................................................	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GTGCTGATCAAGAATATGT----ATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	7	0.57	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................TTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTT........................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TATGT----ATACTTTATGGGGTCGAAG-AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TCAGGGTATAAAAATTGGATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TT-----AT-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------.............................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................TA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------.............................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AGATCGACTCGGCTATGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGATACTT---C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTT............................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------AT...........................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................CAGGGTATAAAAATTGGATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................GGGTATAAAAATTGGATACTT---GAT-------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................CTTT-----AT-------------------------------------------CTTA--CCTATCT-TAGCACAAGC..........................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................CT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGC...............................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATC..........................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAA............	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................AGGGTATAAAAATTGGATACTT---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................GGTATAAAAATTGGATACTT---GAT-------------CG----------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TATGT----ATACTTTATGGGGTCGAAG-ATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAA..........	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................T-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCT.........................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................TA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTT.......................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGGATACTT---GA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................AGGGTATAAAAATTGGATACTT---GAT-------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TTAATGGGTTCAGGGTATAAAAATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------AC.........................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................AATTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-C................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAAA-GTTT....	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TTCAGGGTATAAAAATTGGATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAAA-GTT.....	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................TTGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-C................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................GCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------AC.........................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAAA-GTT.....	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------C...................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TGGGTTCAGGGTATAAAAATTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TATAAAAATTGGATACTT---GAT-------------CG----------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................AT-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATC..........................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAAA-GTT.....	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ATGT----ATACTTTATGGGGTCGAAG-ATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAATAAAAA..........	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TCAGGGTATAAAAATTGGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................TA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATC..........................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TGGATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CG...............................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................TTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------.............................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................TCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGCA..............................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTA---------------------------------------CG------------------------------------------CAGCAGA-AGGT------------ACT----------------------------------------------------CAAA................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................CAGGGTATAAAAATTGGATACTT---GA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................T---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCG......................................................................................................................................................................................................................................................................................................................................................................................	24	6	0.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TT-----AT-------------------------------------------CTTA--CCTATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATC..........................................................................................................................................................................................	29	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TATCT-TAGCACAAGCT------------------------------------------------------------------------------------------------------------ATCTTTA---------------------------------------CG------------------------------------------CAGC...............................................................................................	29	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................ATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................	25	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................	26	5	0.40	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTATGGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................TT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTC.......................................................................................................................................................................................................................................................................................................................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTTCAGGGTATAAAAATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................AT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCTTT-----...............................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................T---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCTTT-----AT-------------------------------------------..................................................................................................................................................................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGGGTGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TGGGTTCAGGGTATAAAAATTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................G-CGCTGATTTCTTT-----AT-------------------------------------------CTTA--CCTATC......................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................T-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCTTT-----AT-------------------------------------------C.................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AATATGT----ATACTTTATGGGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................TAATGGGTTCAGGGTATAAAAATTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAGATCGACTCGGCTATGGGTGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................T-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCTTT-----AT-------------------------------------------CTT...............................................................................................................................................................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TGCTGATCAAGAATATGT----ATACTTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCAAGAATATGT----ATACTTTATGGGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GTGCTGATCAAGAATATGT----ATACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGT----ATACTTTATGGGGTCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAAG-ATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TGTTACATACATTTGGATTTTGCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................ATATGT----ATACTTTATGGGGTCGAAG-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................GT----ATACTTTATGGGGTCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................CGCTGATTTCTTT-----AT-------------------------------------------CTTA--CCTATC......................................................................................................................................................................................................................................................................................................................	25	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................AATGGGTTCAGGGTATAAAAATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................TT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCT......................................................................................................................................................................................................................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................TT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCG......................................................................................................................................................................................................................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................ATACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCT.............................................................................................................................................................................................................................................................................................................................................................................................	22	5	0.20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAGATCGACTCGGCTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	10	0.20	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAGATCGACTCGGCTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	10	0.20	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTG............................................................................................................................................................................................................................................................................................................................................................................................	22	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACTT---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTTCG......................................................................................................................................................................................................................................................................................................................................................................................	28	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TCAGGGTATAAAAATTGGATAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................T---GAT-------------CG----------------------ATAC-----A---------GG-CGCTGATTT........................................................................................................................................................................................................................................................................................................................................................................................	22	6	0.17	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TGCTGATCAAGAATATGT----ATACTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTATGGGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GTGCTGATCAAGAATATGT----ATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCAAGAATATGT----ATACTTTATGGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TGGGGTCGAAG-ATGCTTCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TGTTACATACATTTGGATTTTGCACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TCGACTCGGCTATGGGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GTGCTGATCAAGAATATGT----ATACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	14	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TATCCTTAT-ACCCATTTTTAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................TCCTTAT-ACCCATTTTTAATGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGATCAAGAATATGT----ATACTTTATGGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................AATGGGTTCAGGGTATAAAAATTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................GAATATGT----ATACTTTATGGGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TATGT----ATACTTTATGGGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCAAGAATATGT----ATACTTTATGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTATGGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................CTTTATGGGGTCGAAG-ATGCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGATCAAGAATATGT----ATACTTTATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................CGAAG-ATGCTTCCTTCTGCCTGTTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................ATCAAGAATATGT----ATACTTTATGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCAAGAATATGT----ATACTTTATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TGCTGATCAAGAATATGT----ATACTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTTAATGGGTTCAGGGTATAAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................ATATGT----ATACTTTATGGGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................ACAAATACAATATATCCTTAT-ACCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................CATTTTTAATGGGTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGATCAAGAATATGT----ATACTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TACTTTATGGGGTCGAAG-ATGCTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................ATACAATATATCCTTAT-ACCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CAAGAATATGT----ATACTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................GAATATGT----ATACTTTATGGGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AATATGT----ATACTTTATGGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TGGGGTCGAAG-ATGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................ATCAAGAATATGT----ATACTTTATGGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTATGGGGTCGAAG-ATGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GGCTATATCGACTCAGCTCGTCGTCCTGATCAAGAATATAT----ATACTTTATGGGGTCTGCG-ATGATTCCTTCTGCCTGTTACATACT-------TTTC-ACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAAAAATATTTA----------TA--CA------------------------------------------------------------TTCATT-----A-------------------------------------------TCTTAAACATGTCT------CAAGAT------------------------------------------------------------------------------------------------------------AACAATA---------------------------------------GA------------------------------------------CAAC-AA-TAAT------------AGT----------------------------------------------------ATGGTAAAAAG-ATT----T	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.......TCGACTCAGCTCGTCGTCCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0

droGri2

GGCTATATCGACTCAGCTGTTGATCGTGATTAAGAATATACATATATACTTAATGTGGTCAGAG-ATGCTCCCTTTTGCTTGTTACATAGA-------TTTGCACAAAACCATTATACGCTGTT-ACTCATTCTCAATGGGTTCAGGGCATACAAATAAATTT-------CATA--CATCGACGGCAAGTTAAAAAATTG---------------------------ATT--G---C-------------CTTT-------------TT------------------------CATTTAACTTATTT------CA--------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------CTATTCAACTT--------------------TT-----TAGC-----------------------------------------------------------TAACGAAAGAT-A-----TT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

GGCTAGATCGACTCGGTTGTTGATCCTGATCAAGAATATAT----ATACTTTGTGGGGTCGGAG-ATGCTTCCTTCTGCCTGTTACATACA-------TTTTGGCGACTTTAATATACCATTTC-ACCC------TATGGGTGTATGGTATAAAAATTGATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TTTT------------TCTTGCATAAGATTAGTTTCATTTTGCGCAGTGTAAAGCAACATACGCACACAAGCAA-G------T	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTTTGCGCAGTGTAAAGCAACA........................	26	20	3.90	78	0	12	0	66	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTTGCGCAGTGTAAAGCAACA........................	25	20	1.35	27	0	0	0	27	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAACATACGCACACAAGCAA-G------.	25	20	0.25	5	0	0	0	5	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATTTTGCGCAGTGTAAA..............................	21	20	0.15	3	0	0	0	3	0
................................................................................................................................................................TC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TTTT------------...................................................................	26	20	0.10	2	0	2	0	0	0
.........................................................................................................................................................AAATTGATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------..........................................................................................	27	20	0.10	2	0	0	0	2	0
........................................................................................................................................................................................................................................G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TTTT------------TCT................................................................	27	20	0.10	2	0	2	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCATTTTGCGCAGTGTAAAGCA...........................	26	20	0.05	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TTTT------------TCTTG..............................................................	24	20	0.05	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGCAGTGTAAAGCAACATACGCA..................	27	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................C----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TTT................................................................................	24	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTGCGCAGTGTAAAGCA...........................	21	20	0.05	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTGCGCAGTGTAAAGCAACATA......................	26	20	0.05	1	0	0	0	1	0
..........................................................................................................................................................AATTGATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------T.........................................................................................	27	20	0.05	1	0	1	0	0	0
........................................................................................................................................................AAAATTGATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------..........................................................................................	28	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................TGATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----...................................................................................	25	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGCAGTGTAAAGCAACA........................	21	20	0.05	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCATTTTGCGCAGTGTAAA..............................	23	20	0.05	1	0	0	0	1	0
..............................................................................................................................................................GATC----------------------------------------------------------------------G-------------------------------------------CTG---------------------------------------------------------------------------------------------------------------------------------------------------C-TTTGTTTTCTCTA-------------------------------------------------------------------------------------TC-----TT.................................................................................	26	20	0.05	1	0	1	0	0	0
................................................................................................................................C------TATGGGTGTATGGTATAAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0

dp5

GGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATAT----ATACTTTATGGGGTCGGAA-ACGATTCCTTCTGGACGTTACACACATACACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTATCGGCTATAAAAATCTGTAATTTCTCCG--------------------------------------CCAA--AGCA---------GT-CAG-------------CTATTGT---CACGGTATCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAGCTTTCGTCA-CG----------------------------------------------------------CTGC--------------AT-------------------------------------------CAGACACTAGA-GTTTGG-C	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................................................CGATTCCTTCTGGACGTTACACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	5.10	102	0	102	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................TCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAGCTTTCGTCA-CG----------------------------------------------------------C..................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	4	0	0
............................................................................................................................................................TCTGTAATTTCTCCG--------------------------------------CCAA--AGCA---------G...................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	2	0	0
..................................................................................................TTACCACAAATCTAATATACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	1.85	37	0	37	0	0	0	0	0	0	0	0
....................................................................................................................................................................TTCTCCG--------------------------------------CCAA--AGCA---------GT-CAG-------------CTATTG...........................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................T---CACGGTATCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAGCTTTCG...................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................TTTCTCCG--------------------------------------CCAA--AGCA---------GT-CAG-------------CTA..............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................TGAGTATCGGCTATAAAAATCTGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
...................................................................................................................................................................TTTCTCCG--------------------------------------CCAA--AGCA---------GT-CAG-------------CTATTG...........................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................T---CACGGTATCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAGCTTTC....................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................GAGTATCGGCTATAAAAATCTGTAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................TCTGTAATTTCTCCG--------------------------------------CCAA--AGCA---------GT-CAG-------------.................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TATCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAGCTTTCGTCA-CG----------------------------------------------------------C..................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TTGAGTATCGGCTATAAAAATCTGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................TGGGGTCGGAA-ACGATTCCTTCTGGACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	20	0.30	6	0	0	6	0	0	0	0	0	0	0
...................................................TATGGGGTCGGAA-ACGATTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.30	6	0	6	0	0	0	0	0	0	0	0
...........................................................CGGAA-ACGATTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.30	6	0	0	0	0	0	0	0	6	0	0
................................................CTTTATGGGGTCGGAA-ACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.20	4	0	4	0	0	0	0	0	0	0	0
...........................................................................................TACACTTTTACCACAAATCTAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0
............................................................................TGGACGTTACACACATACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.....................................................TGGGGTCGGAA-ACGATTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................TACCACAAATCTAATATACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0	0	0	0	0	0
................................................CTTTATGGGGTCGGAA-AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...........................................................CGGAA-ACGATTCCTTCTGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0	0	0	0
......................................................................TCCTTCTGGACGTTACACACATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0
...................................................TATGGGGTCGGAA-ACGATTCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..........................................................TCGGAA-ACGATTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0	0	0	0
.....................................ATAT----ATACTTTATGGGGTCGGAA-ACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	1	0	0	0
......................................................................TCCTTCTGGACGTTACACACATACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TTCTGGACGTTACACACATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

GGCTTAATCGACTCGGCTATTGATGCTGATCAAGAATATAT----ATACTTTATGGGGTCGGAA-ACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTATCGGGTATAAAAATGCTCT-------GAT-AGT--G------------------------------------------------AAG-CGTTAGTCTGATT-----AA-----------------------------------GTTATTGCATGAAAGCTGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------CGGCGGG-AAGT------------AGTGCC-------------------------------------------------TAAATGTACAA-ATCTGGCA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................TTCCTTCTGGACGTTACACACATCCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	20	0.10	2	0	2	0	0	0	0
....................TGATGCTGATCAAGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
...TTAATCGACTCGGCTATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
............................................................GGAA-ACGATTCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
.......................................AT----ATACTTTATGGGGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	1	0

droAna3

GCTCATATCGACTCAGGAGGTGATCTTGATCAAGAATATAT----TTACTTTATAGGGTCGGCG-ATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATCATAATACCCTCT-------------GC-----AAGGGTATAAAAATATACT-------GATTAGT--GTAAGA----------------------------------G--------------AATG-------------------------------------------------------------------TCT------GAATA-------------------------------------TAATA-TT-------------------------------------------------------------------------CTCTA-----------------------------TCATGTTTTTATACCCTTGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGCCAAAAGT-GTGTGTTA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGC................	25	20	0.30	6	0	6	0	0	0	0
........................................................................CTTCACTGCGTTGCACACT-------TTTGACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.25	5	5	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGCC...............	26	20	0.20	4	0	4	0	0	0	0
.CTCATATCGACTCAGGAGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGC................	24	20	0.10	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGCC...............	25	20	0.10	2	0	2	0	0	0	0
....ATATCGACTCAGGAGGTGATCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
..TCATATCGACTCAGGAGGTGATCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
....................................................................................................TGACCAAAATCATAATACCCTCT-------------GC-----C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0
.......................................................................................................CCAAAATCATAATACCCTCT-------------GC-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
...............GGAGGTGATCTTGATCAAGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.....TATCGACTCAGGAGGTGATCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAATT------------------------------T-----------------------------------------------------------TGGCCAAAAGT-GTG.....	24	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTATAATT------------------------------T-----------------------------------------------------------TGGCCAAAAGT-GC......	26	20	0.05	1	0	1	0	0	0	0
..TCATATCGACTCAGGAGGTGATCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..TCATATCGACTCAGGAGGTGATCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGGGTATTATAATT------------------------------T-----------------------------------------------------------TGGCG...............	25	20	0.05	1	0	0	1	0	0	0
....ATATCGACTCAGGAGGTGATCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	1
......................................................................................ACACT-------TTTGACCAAAATCATAATACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
...........................................................................................................AATCATAATACCCTCT-------------GC-----AAGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0

droBip1

GCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAG-ATGTCTCCTTCACTGCGTTGCACACT-------TTTGGACAAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAATGAAACA-------G-----------------------------CTCGCTCGGATAA---------------AA-CG----------------------------------------------------------------------------------------TTTTATTGGACTGACGC-------------------------------------------------------------------------------------CTTAACATAATCGTTCTA-------------------------------------------------------------------------------------CG-----TTGC-----------------------------------------------------------TAAATAAAGAC-GTTTA--G	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAA-ACGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTGC--------------------AAGGGTATAAAAATTATATTT-----G---AGTTAAT---TTCGACAA-------------------------------------GC-CG-------------------------------------------CTGTTTTAATGTCATTACATTAAATTAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CT------------------------------------------CAGATAA-AGGA------------ACCGCTTT-----------------------------------------------TAGATAAAAAA-GA----TT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ACATTTTTCGACTCAGCTGGTGATGCTGATCAAGAATATAT----ATACTTTATGGGGTCTAAG-GTGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTTTT-GCTC------TGC-----AAGGGTATACAAATCAAATTT----------------------------------------------TACAGGA-G--------AAG-CTTTTCCT--------TTATTTT-------------CGTATTTCGGT-----------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTG---------------------------------------TG--------------------CGAT----------------------TGCAGTATTTCCATGC-----------------------------------------------------------AAATGAAAAAAAATT---TG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GGCTAGATCGACTCGCCTAGTGATGCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAG-ATGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTCT-------------GC-----AAGGGTATAAACATAAATTC-------GG----------------------------------------------------------------------------------------------------------------------------------TGTCCTGGGCTTAGATTTGTTTTACTTTAGTTACAC---------------------------------------------------------------------------------------CCATTTTTA---------------------------------------AG--------------------CTGT----------------------TAT-ATAT-----ACC-----------------------------------------------------------TAAACTAACAA-GCCTTACA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GGCTAGATCGACTCGGCTAGTGATCCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAA-ACGCTTCCTTCTACCTGTTACATACT-------TTTGCACGAATACAATATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAAGTTATGTT-------G------TTGCCCGCAACTAGAAA-CTG-CCTG----------------------------------------------------------------------------------GTCTGT-------------------------A-------------------------------------CAATA-TT-------------------------------------------------------ATTAATATTATTTTTGCATCGCA-------------------------------------------------------------------------------------GA-----TGTT------------ATATAAAA-----------------------------------------AAAAGTAAT-GTTGGGCG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GGCTGGATCGGCTCGGCTAGTGATCCTGATCAACAACATAT----ATACTTTATGGGGACGGAA-ACGCTTCCTTCTACCTGTTACATACT-------TTCCGACAAATCTACTGTACCCTTTT-GCTC------TACGAGTTACGGGTATAATAACAACTT-------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTATTCATTATA-------------------------------------------------------------------------------------CA-----TTTT------------TCATAAGA----CATGTTCAGATTGACAAAGTAGAA-GCTC------CAAATTAAAAA-G-------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAATATAT----ATACTTTATGGGGTCGGAA-ACGCTTCCTTCTAGCTGTTACATACT-------TTTGCACGAATCTAATATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAATATAATGT----------------------------------------------TAA---------------AATTT--------TTCACCCTATTGTTCTTATG------------------------------------GG--------------------------------------------------------------------------------------------------------------------------------AGCTATC----------------------------------GGCA-CGCGCTTTTACCCT-------------------------------AATCAA-GGGT------------AAT----------------------------------------------------CAAATAATAAG-ATTTG--G	Size	Hit Count	Total Norm	Total
No Reads

droEug1

GGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATAT----ATACTTTATAGGGTCGGAAAAAGCTTCCTTCTATCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAATTACAAACG--------TGC--CAAAAT----------------------------------AAACTTCTAAAACTA-------------------------------------------TTA--------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATCTAC------------------------------CATATTACA-----------------CA-------AGCACTAACTACG---------------TGCATGAAATGTCTG-----------------------------------------------GAG-TCCAAA-----CGGTA	Size	Hit Count	Total Norm	Total
No Reads

dm3

GGCCAGGTCGACTCCGCTGTTGATTCTGATCAAGAATATAT----AAACTTTATATAGTCGGAA-TAGCTTCCTTCTGCTGGTTATATACT-------TTTCGACGAATCTAGTGCACTTTTTA-ACTC------TATGAGTAAGGGGTATAATGAACTCCA-------GAT-------------------------TTA---------------------------ATC-CG-----------------TTTTCCTAATT---------------------------------------GTTGTCTTCGGGACAAGCTTGCT------------------------------------------------------------------------------------------------------------TT-------A--------------------------------C-----------------------------------------------------A-----T--T-----------------------------------------------------------TTATAAAAAAA-ATTTAACT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................................................................................................................................................TATAATGAACTCCA-------GAT-------------------------TTA---------------------------ATC-CG-----------------T.............................................................................................................................................................................................................................................................................................................................................................................	26	1	79.00	79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	5	7	27	11	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
..................................................TTATATAGTCGGAA-TAGCTTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	36.00	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	4	0	4	2	0	0	0	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTATATAGTCGGAA-TAGCTTCCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	16.00	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTATATAGTCGGAA-TAGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................T-------TTTCGACGAATCTAGTGCACTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	6	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TAATGAACTCCA-------GAT-------------------------TTA---------------------------ATC-CG-----------------T.............................................................................................................................................................................................................................................................................................................................................................................	24	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.........GACTCCGCTGTTGATTCTGATCAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TTATATAGTCGGAA-TAGCTTCCTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................CTGATCAAGAATATAT----A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGATCAAGAATATAT----AAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TTCTGATCAAGAATATAT----A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

GGCCAGATCGTCTCGGTTATTGATCCTGATCAAAAATATTT----TTACTTTATATTGTCTTAA-ACGCTTTCTATTGTCTGTTACACACT-------TTTCAAATAATCTAATATACCCTTTT-ACTC------TACGAGTAACGGGTACAAATAACGGGTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAAAGATGAAATTGATTACTGGTTGATAAACATGACACTA-TCGTCAC-TTTATACTTCTTA-------------------------------------------------------------------------------------CT-----TTTT------------TTATATAAAAAATTTATTTGAA----------------------------------------T-GAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................TACCCTTTT-ACTC------TACGAGTAACGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	1.15	23	0	0	0	0	0	0	0	0	6	17	0	0	0	0	0	0	0
...........................................................................................................................T-ACTC------TACGAGTAACGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...........................................................................................................................T-ACTC------TACGAGTAACGGGTACAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	11	0.18	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
...........................................................................................................................T-ACTC------TACGAGTAACGGGTACAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	7	0.14	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................TTTT-ACTC------TACGAGTAACGGGTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	16	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..............................................................................................................................CTC------TACGAGTAACGGGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	14	0.07	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................TTT-ACTC------TACGAGTAACGGGTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	17	0.06	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................CTTTT-ACTC------TACGAGTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TT-ACTC------TACGAGTAACGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TACCCTTTT-ACTC------TACGAGTAACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................TATACCCTTTT-ACTC------TACGAGTAACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

GGCTAGATCGACTCGGCTATTGATC------GGCTAT-TGA----CTACTTTATGTAGTCGGAA-ACGTTTCCTTCTGCCTGTTACATACT-------TTTCAACGAATCTAGTATACTCTAT--AC---------------------TATAAAGAGCTGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGATACAATGGTAACGCATTTATCGGTGCAGATATATCGTTTCTTTATCAGGTATCATTACAGAGAAGGCGG-------------------------------------------------------------------------------------------------------------------------------------GAT------------ACT----------------------------------------------------GACCGGAAAAC-GTATAG-C	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...................................................................................................TTCAACGAATCTAGTATACTCTAT--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0
.......TCGACTCGGCTATTGATC------GGCTAT-TGA----C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	2	0.50	1	1	0	0	0
..................................................................CGTTTCCTTCTGCCTGTTACATACT-------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0
.....................................................................TTCCTTCTGCCTGTTACATACT-------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.25	5	5	0	0	0
.................................................................ACGTTTCCTTCTGCCTGTTACATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	0.25	1	1	0	0	0
...............................................................A-ACGTTTCCTTCTGCCTGTTACATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	4	0.25	1	1	0	0	0
..................................................................................................TTTCAACGAATCTAGTATACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	18	0.06	1	1	0	0	0
....AGATCGACTCGGCTATTGATC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0

droYak3

GGTCATATCGACTCGGCTATTGGTCCTGATCAAGAATATAT----ATACTTTATATGGTCGGAA-ACCCTTCCTTCTGCCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTT-ACTC------TACGAGTAACGGGTATAAAAATCACTC-------GAA--------------------------------------CAG--AGCA---------GA-CACT--------------------------------------------------------------------------------------CT------------------------------------------------------------------------------------------------------------GT-------------------ACTTAACTGAATTCTGGTTAAAGTTATTATA---------AAGGTAT----------------------TATAATATACTGATCG-----------------------------------------------------------TAAGAAAACAA-AGTTGGCA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................................................TCCTTCTGCCTGTTACATACT-------TTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.60	12	0	12	0	0	0	0	0	0	0	0	0
.............................................................................................................................ACTC------TACGAGTAACGGGTATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.55	11	0	11	0	0	0	0	0	0	0	0	0
....................................................................................................TCAACGAATCTAGTATACCCTTTT-AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.25	5	0	5	0	0	0	0	0	0	0	0	0
...........................................................................................................................T-ACTC------TACGAGTAACGGGTATAAAAATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
.......................TCCTGATCAAGAATATAT----ATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
....ATATCGACTCGGCTATTGGTCCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
......................................................ATGGTCGGAA-ACCCTTCCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................TGGTCGGAA-ACCCTTCCTTCTGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............TCGGCTATTGGTCCTGATCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................GTCGGAA-ACCCTTCCTTCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................TACATACT-------TTTCAACGAATCTAGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................TGGTCGGAA-ACCCTTCCTTCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................ACCCTTCCTTCTGCCTGTTACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................TGGTCGGAA-ACCCTTCCTTCTGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0

droEre2

GGCCAGTTCGACTCAATTATTGATTCTGATTCAGAATATAT--ATGTACTTTATATGGTCGGAA-ATGCTTTCTTCTACCTGTTACATATT-------TTTCAACGAATCTAGTATACCCTTTT-ACTT------C---AGTAACGGGTATAAAAAGAGAGA----------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACGCTA-TAGTCCCATTTCTCGACTATCAGATACCCGTTA--------------------CT------------------------------------------CAGCTAA-TGGT------------AGT----------------------------------------------------GCAATGAAAAA-AT-----T	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..................................................................................................TTTCAACGAATCTAGTATACCCTTTT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.25	5	0	0	0	0	0	0	5

-20.8	-20.3	-19.9	-19.9

dvi_9645

scaffold_12952:216857-217007 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

CCGATCTAGCTGAGCCGATACCCACGACTAGTTCTTATACATATGAAATACCCCAGCTTCTACGAAGGAAGACGGACAATGTATGTAAACCTAAAACGTGTTTATGTTATATAGGAATATGGGTAAAAATTACCCAAGTCCCATATTTTTAACCTATGAACTAGCTATGTCCGCGACTAAAGAAATAGAATGGATAGAATCGTGTTCGATAGAAATGCGTCGTCTTCCATGAGTTTATTTTTTCAAACCGT *******************************************************************.......(((.((.((.......(((((((((((...((((((.....))))))..))))))))....)))....................)).)).)))********************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060675 140x9_ovaries_total	SRR060670 9_testes_total	SRR060674 9x140_ovaries_total	SRR060679 140x9_testes_total	SRR060673 9_ovaries_total	SRR060686 Argx9_0-2h_embryos_total	M047 female body	SRR060687 9_0-2h_embryos_total	SRR060676 9xArg_ovaries_total	SRR060678 9x140_testes_total	SRR060685 9xArg_0-2h_embryos_total	SRR060684 140x9_0-2h_embryos_total	SRR060657 140_testes_total	SRR060677 Argx9_ovaries_total	SRR060688 160_ovaries_total	M027 male body	GSM1528803 follicle cells	SRR060662 9x160_0-2h_embryos_total	SRR060681 Argx9_testes_total	SRR060682 9x140_0-2h_embryos_total	SRR060654 160x9_ovaries_total	SRR060656 9x160_ovaries_total	SRR060658 140_ovaries_total	SRR060659 Argentina_testes_total	SRR060680 9xArg_testes_total	SRR060683 160_testes_total
..................................................................GGAAGACGGACAATGTATGTAAACCT...............................................................................................................................................................	26	0	20	2.25	45	0	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................CTACGAAGGAAGACGGACAATGTATG......................................................................................................................................................................	26	0	20	2.25	45	28	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................AAGGAAGACGGACAATGTATGTAAACCT...............................................................................................................................................................	28	0	20	1.60	32	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................AAGACGGACAATGTATGTAAACCT...............................................................................................................................................................	24	0	20	1.40	28	0	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................AGACGGACAATGTATGTAAACCT...............................................................................................................................................................	23	0	20	1.20	24	0	0	0	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................GAAGACGGACAATGTATGTAAACCT...............................................................................................................................................................	25	0	20	1.20	24	0	0	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GAGCCGATACCCACGACTAGTTCTT.......................................................................................................................................................................................................................	25	0	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................GACGGACAATGTATGTAAACCT...............................................................................................................................................................	22	0	20	0.70	14	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTTATATAGGAATATGGGTAAAAATT........................................................................................................................	26	0	16	0.44	7	0	0	1	0	0	0	1	0	0	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TTATATAGGAATATGGGTAAAAATT........................................................................................................................	25	0	16	0.38	6	0	0	0	2	0	0	0	0	1	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................TGTTATATAGGAATATGGGTAAAAATT........................................................................................................................	27	0	16	0.38	6	0	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	0
..................................................................GGAAGACGGACAATGTATGTAAAC.................................................................................................................................................................	24	0	20	0.35	7	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TATATAGGAATATGGGTAAAAATT........................................................................................................................	24	0	16	0.25	4	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................ACGAAGGAAGACGGACAATGTATG......................................................................................................................................................................	24	0	20	0.25	5	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................GAAGGAAGACGGACAATGTATG......................................................................................................................................................................	22	0	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................GGACAATGTATGTAAACCTAA.............................................................................................................................................................	21	0	20	0.15	3	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCAGCTTCTACGAAGGAAGACGGACAAT...........................................................................................................................................................................	28	0	20	0.15	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
..............................................................................................................ATAGGAATATGGGTAAAAATT........................................................................................................................	21	0	16	0.13	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................AGACGGACAATGTATGTAAACCTAAA............................................................................................................................................................	26	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................GGAAGACGGACAATGTATGTA....................................................................................................................................................................	21	0	20	0.10	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................CGGACAATGTATGTAAACCT...............................................................................................................................................................	20	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
......TAGCTGAGCCGATACCCAAGACT..............................................................................................................................................................................................................................	23	1	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................GTGTTCGATAGACACGCGTA..............................	20	3	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................GTTATATAGGAATATGGGTAAAAATTACC.....................................................................................................................	29	0	15	0.07	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................ATATAGGAATATGGGTAAAAATT........................................................................................................................	23	0	16	0.06	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................ATATAGGAATATGGGTAAAAAT.........................................................................................................................	22	0	18	0.06	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................GTGTTTATGTTATATAGGAATATGGGT...............................................................................................................................	27	0	18	0.06	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................GCTTCTACGAAGGAAGACGGACAATGT.........................................................................................................................................................................	27	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................AGTTATATAGGAATATGGGTAAAAATT........................................................................................................................	27	1	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GACAATGTATGTAAACCTAAAACGTGT......................................................................................................................................................	27	0	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ATTACCCAAGTCCCATATTTTTAA...................................................................................................	24	0	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................GAAGGAAGACGGACAATGTATGTAA...................................................................................................................................................................	25	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AAAAATTACCCAAGTCCCATATTTT......................................................................................................	25	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................CTTCTACGAAGGAAGACGGACAAT...........................................................................................................................................................................	24	0	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTTATATAGGAATATGAGTAAAAATT........................................................................................................................	26	1	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................TATGTTAAATAGGAATATGGGTAAAAAT.........................................................................................................................	28	1	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................AAGGAAGACGGACAATGTATGT.....................................................................................................................................................................	22	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................GTTTATGTTATATAGGAATATGGGTA..............................................................................................................................	26	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................GCTTCTACGAAGGAAGACGGACAATG..........................................................................................................................................................................	26	0	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TTATATAGGAATATAGGTA..............................................................................................................................	19	1	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TTCTACGAAGGAAGACGGACAATGTA........................................................................................................................................................................	26	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................AGACGGACAATGTATGTAAAC.................................................................................................................................................................	21	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................AGGAATATGGGTAAAAATT........................................................................................................................	19	0	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................ACGAAGGAAGACGGACAATGT.........................................................................................................................................................................	21	0	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................CTTCTACGAAGGAAGACGGACAATG..........................................................................................................................................................................	25	0	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................CGAAGGAAGACGGACAATGTATGTA....................................................................................................................................................................	25	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCAGCTTCTACGAAGGAAGACGGA...............................................................................................................................................................................	24	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.................................CTTATACATATGAAATACCCCAGC..................................................................................................................................................................................................	24	0	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GATACCCACGACTAGTTCTTATAT...................................................................................................................................................................................................................	24	1	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
................................................................AAGGAAGACGGACAATGT.........................................................................................................................................................................	18	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................................................TACGAAGGAAGACGGACAATGT.........................................................................................................................................................................	22	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.........................................................TTCTACGAAGGAAGACGGACAATGTATG......................................................................................................................................................................	28	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................TGTTATATAGGATTATGGGTAAAAATT........................................................................................................................	27	1	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................CGAAGGAAGACGGACAATGT.........................................................................................................................................................................	20	0	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TTTATGTTATATAGGAATATGGCTA..............................................................................................................................	25	1	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................AAGGAAGACGGACAATGTAT.......................................................................................................................................................................	20	0	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TCCCCAAGTCCCATATTTTTAAC..................................................................................................	23	1	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................AGGAAGACGGACAATGTATGTAAAC.................................................................................................................................................................	25	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.........................................................TTCTACGAAGGAAGACGGACAAT...........................................................................................................................................................................	23	0	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................AGACGGACAATGTATGTAAACCTA..............................................................................................................................................................	24	0	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0