ID:

dvi_9572

 Coordinate:

scaffold_12932:2080582-2080732 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.2

Flybase annnotation

exon [dvir_GLEANR_15126:2]; CDS [Dvir\GJ14895-cds]; intron [Dvir\GJ14895-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
TART_DVLINEJockey+
mature
  1. scaffold_12855:2679918-2679940 +
  2. scaffold_12855:7141561-7141583 +
  3. scaffold_12875:939446-939468 -
  4. scaffold_12875:1460718-1460740 -
  5. scaffold_12928:5301772-5301794 -
  6. dvi_9572  scaffold_12932:2080627-2080649 +
  7. scaffold_12970:4563522-4563544 +
  8. scaffold_12970:11409407-11409429 -
  9. scaffold_13047:4022474-4022496 +
  10. scaffold_13049:1263121-1263143 +
  11. scaffold_13049:16323369-16323391 +
  12. scaffold_13049:21522999-21523021 -
star
  1. scaffold_12472:642677-642695 +
  2. scaffold_12822:3716979-3716997 +
  3. scaffold_12855:4632392-4632410 +
  4. scaffold_12875:154078-154096 +
  5. scaffold_12875:1881652-1881670 +
  6. scaffold_12875:5867600-5867618 +
  7. scaffold_12875:17112354-17112372 -
  8. scaffold_12928:4846324-4846342 +
  9. scaffold_12932:393540-393558 +
  10. dvi_9572  scaffold_12932:2080582-2080600 +
  11. scaffold_12963:8333054-8333072 +
  12. scaffold_12963:11103015-11103033 +
  13. scaffold_12963:11432026-11432044 +
  14. scaffold_12970:3812225-3812243 +
  15. scaffold_13047:1338296-1338314 -
  16. scaffold_13047:12020779-12020797 +
  17. scaffold_13047:15454510-15454528 -
  18. scaffold_13049:6899950-6899968 +
  19. scaffold_13049:16325833-16325851 +
  20. scaffold_13049:17211002-17211020 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACCATCATCTCCACAGAGGTGAACTGCGTAACTACTGCCATTCTCAGCAGCAGCAGCAGTAGCAGCAACCACAACAAGAACAACAGTAATATTAGAAGCAACAGCAGCAGCAGCAGCCACAGCACCAGCAGCAGCCACAGCAACTGTCACGATCCTGATGCAGAGCACGGCGAAGACACAGCCGGCGTTCACAGTTCCAACCAAAAGCTCAGCAACAATAATAGCCAGGAAGATATAAATCCTAGCGAGA
**************************************************((.((.((.((.((..................................)).)).)).)).))......************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 SRR060671
9x160_males_carcasses_total
 M047
female body
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060656
9x160_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060670
9_testes_total
...........................................................................CAACAACCACAGTAATATTAGA.......................................................................................................................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................ATCATGATGCAGAGGATGGCGA............................................................................. 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................CAGCAGCCAAAGCACGAGCAGCAGC................................................................................................................... 25 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................GAAGCAACAGCAGCAGCAGCAGC..................................................................................................................................... 23 0 12 0.08 1 0 0 0 0 1 0 0 0 0 0
......................................................................................GTAATATGAGAAGCAACACT................................................................................................................................................. 20 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................GCAACAGCAGCAGCAGCAGC..................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................GAAGCAACAGCAGCAGCAG......................................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................GATATAAACCCTAGCGTAA 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.................................................AGCAGCAGCAGTAGCAGCA....................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................GCAACAGCAGCAGCAGCAGCCA................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..................................................GCAGCAGCAGTAGCAGCAA...................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

ATGGTAGTAGAGGTGTCTCCACTTGACGCATTGATGACGGTAAGAGTCGTCGTCGTCGTCATCGTCGTTGGTGTTGTTCTTGTTGTCATTATAATCTTCGTTGTCGTCGTCGTCGTCGGTGTCGTGGTCGTCGTCGGTGTCGTTGACAGTGCTAGGACTACGTCTCGTGCCGCTTCTGTGTCGGCCGCAAGTGTCAAGGTTGGTTTTCGAGTCGTTGTTATTATCGGTCCTTCTATATTTAGGATCGCTCT
*************************************************************************************************************************************((.((.((.((.((..................................)).)).)).)).))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 M027
male body		 SRR060669
160x9_females_carcasses_total
 V047
embryo
 M047
female body
....................................................................................................................................................................................TCGGCCGCAAGTGTCCGGGTT.................................................. 21 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................CCGAAAGTCTCAAGGTTG................................................. 18 2 6 0.50 3 0 3 0 0 0
.........................................AAGAATCTTTGTCGTCGTCATC............................................................................................................................................................................................ 22 3 5 0.20 1 0 0 1 0 0
........................................................................................................................................................................................TCGCAAGTGGCAACGTTGG................................................ 19 3 15 0.07 1 0 0 0 1 0
....................................................................GGGTGTTGTTCTTGTTGTGAT.................................................................................................................................................................. 21 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12932:2080532-2080782 + dvi_9572 TACCATCATCTCCACAGAG-----GTGAACTGCG------------------------TAACTACTGCC-----------ATTC------TCAGCAGCA------------GC---------AGCAGTAGCAG---CAAC----------------------------------------------------------CAC------A---AC---AAGAACAACAGTA---------------AT---------ATTAGA---------------------------------------------------AGC---------------------------AACAGCAGCA---------------------------------------------------------------------------------------------------GCAGCAGCCACAGCACCAGCAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGCAACTGTCACGATCCTGATGCAGAGCACGGCGAAGACACAGCCGGCGTTCACAGTTCCAACC--------------------------------------------------------------A-----------------AAAGC-----------------------------TCA-------------------------GCAACAATAATAGCC---------------------AGGAAGATATAAATCCTAGCGAG---------------------------A
droMoj3 scaffold_6473:5645854-5646086 + CACCATCATCTCCACGGAA-----GTGAACTGCG------------------------TCACGACTGCC-----------ATAC------TCAGTCACA------------GC---------AAGAGCAACAG---CAGC-------------------------------------------------------------------A---GC---AGCAGTAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCGGCAGCGGCAGCGGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCAACTGTCACGATCCTGATGCCGAGCCGGGGCCGGACACAGCGAACGCACACAGCTCCAACCAAAGT------------------------CCG-----GGCCAGA-----AGC--------------------------------------------------------------AC-------------------------------------A---------GCG------GCCATCCGGAGGACAGCAAACTCGTCGAG---------------------------A
droGri2 scaffold_15203:6437996-6438246 - CACCATCATCTCAACGGAG-----GTGAACTGCG------------------------TAACTACTGCC-----------ATAC------TCAGCAGCA------------GC---------AACAGCAACAG---CAAC-------------------------------------------------------------------A---AT---ACAAATAACAATA---------------AA---------AAAAGG---------------------------------------------------AGC---------------------------G------------------------------------------------------------------------------------------------------------ATAGCAGCAGCAGCGTCAGCAGCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGCAACGGCCCCGATCCGGATACGGAGCACGTGGCAGACACAGCAGCCGCACTCAGTCCAAATCACAAT------------------------CGA-----AATCATC-----AGC--------------------------------------------------------------ACA-------------------------ACAATAGTA---------------------GCAATCAGGAGGATATCAATCCCAGCGAA---------------------------C
droWil2 scf2_1100000003789:1832-2088 - CAACAACAGCAACAACAAC-----TGCAGCAGCA------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCAGCAACAATGGCAGCAACAACAACAGCAACAACAACTGCAGCAG------------------C------------A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGCAACAGCAGCAACAACAGCAGCAACAACAAC---------------------AGCAGCA-------------------------------------------------------GC----------AACAGCAGCATCAG----------------------------------CAA---------------CAGCAACAG--------------------C------------------AGCAGC------GAATGCAACAGCAACAG------------------------------------------------------------------CAACAGCAGCA-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AATTGCAGC------------AACAAC---------------------AACAACAGCAGCAGCAAC---------------------------A
dp5 XR_group6:2742766-2742984 + TACCAAAAACAACAAATGA-----GTGGAATGCACTGCCCATAAAAGC-----------TT--AAAGCA-----------ACAAAAT---------------------------------------GCAACAG---CAAC----------------------------------------------------------AAC------A---AC---TGT---AAAAACAAGA------------AC------------------------------------------------------------AGCAACAGCAACAGCAACAGCAAAAACAAC---------------------AACATTAGCA-------------------------------------------------------GC----------A-------------------------------------------------------------------ACAACACCATAATTTGTATACAAAACGC------------------AA------AAGAAGAAGAAACAGCAGCAGCGCAGCAGCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------AAA-------------------------GCAGCAATG---------------------ACA---------------------GAC---------GTGA----------------A
droPer2 scaffold_4:6848891-6849125 - GGCGATC----CAGCAGCAGGCGATCCAGCAGC------------------------------ATCACC-----------A------------------------------------------------GCAT---CTC-CAGCAGCAACATCATCATCAGCAGCAGCATCAGGCG------------------------------------------C---A------G------------------C---AGC------------------AGGCAC---------------------------AGCAACAGCAGCAGCAACAGCAGGCTCAGCAGC---------------------------------AGG------------CTC-------------------------------AGC----------AACAGCAACAACAA----------------------------------CAG---CAG---------CAACAACAGC--------------------------------------AACAAC------AACAGCAACAACAGCAG--CAA-------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC------------AGCAGCAACAACAACAGCA-GC-----AACAGAAGCTAAAGC--A---------------------------G
droAna3 scaffold_12929:976938-977163 + CAACAACAGCTGCAA-------------------------------------------------------------------------------------------------------------CAGCAACAG---CAGC-------------------------------------------------------------------A---AC---TGCAACAACAGCA---------------AC---------TCCAGC---------------------------------------------------AGCAGCAGCAGCAGC------------AGCAGCAACAACAGCAACAGC------A------A---------------------------------ATGGTGGTGC-------------------------------CAC-------------------------------------------------CAGCTCCACCACAACCTGCACCACCGC--C------------------ACC-------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAACCAAA--------------------------------------------------------------------------------GATAGTGAATACTTTTACGGAAATCCCCGGCACCACGGGCGTTGGCAGCTCCTATGCCA-----------------AGG---------------------AGCAGCAGCAGCAGCAAC----------------------------
droBip1 scf7180000395450:370800-371030 - CAACGACAACAGCGCCGAC-----AGCCTCTGC--------------------------AGGTGCCGCCGCTCTGACGGGG-AACAG------------GCAACAGCAACATCAGC------AGCAACAGCAG---CAGC-------------------------------------------------------------------A---GC------A------------------------A------------------------------------------------------------------CATTACCAGCAACAGA------AAC---AGCAGCAGCAGCAGCAACATC---------------------------------------CACTTCAGA-------AC-------------------------------CAC-------------------------------------------------CAGCAACATCA-------------------------------------------CAAGAGTGCG--------------------------------------------------------------------------------------------------------------------------GCAGATGCGGCGC---------ATCACTTCCATAAC------------------------CCG--------------------CTCAGC-------------------------AA-------------------------------------------------------------TA------------------------------CACAGTGCAATGAAGTAAATCCC---------------------------A
droKik1 scf7180000302414:738120-738348 + CAGCAGCATCTCCAGGCGG-----CGGCCCAG---------------------------------------------------------------------------------------------------------------CAGCATCTCCAAG------------------------CTCAGCAGCAGCAGCAGCAGGCGCAGCAAGC------GCA---GCAGCA---------------GC------------------------------------------------------------------------AGCAAC---------------------------------ATCCACACCA---------------------------------------------------------------------------------------------------------------------------------------GCAACACCA-------------------------------------------TCAGGCAGCGGCAGCAGCGGCGG--CAGCAGCAGC---------------------------------------------------------------------------------------------------------------------ATTGCATCATCAAAGCATGCTGTTGACCTCGCCGGGTCTGCCG-----CCCCAGC-----ATG--------------------------------------------------------------CC-------------------------------------A---------TTA------GCCTGCCGCCCGGCGGTAATCCTGGCCAG---------------------------A
droFic1 scf7180000453438:44419-44651 - CAGCAACAGCGACAGGATC-----AGCAGCAGCA------------------------GCAACAGCA--------------------------------------------------------------ACAG----------------------G------------------------ATCAGCAGCAGCAGCAACAACAACAGCAATC------GCA---------A------------------C---AGG------------------AGTC---------------------GGGAC---AACAGCAACAGCAGCAGCAAC---------------------------------------------AAAATCAGCAGCAGCAGCAGCAACAGGA--------------------------------------TCATCAGCAG----------------------------------------CAG---------CAGCAACAAC--------------------------------------AACAAC------AA------------------------------------------------------------------TCGCAACAGCAACAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------G-----------------C------------------------------------------------------AACAGCAGC------------AGCAAG---------------------AACAGAAACCACAGCCAA---------------------------A
droEle1 scf7180000491356:120783-120996 - CACCAGCAACAGCAGCAAC-----A--------------------------------------------------------------------------------------------------------TCAG---CAA-CAGCAGCAACATCTGCAGCAGCAGCAACATCAGCAA------------------------------------------C---A------G------------------C---AGC------------------A---AC---------------------------ACCATCAGCAGCAACAACAGCAGCAACACCATC---------------------AGCAGCA-------------------------------------------------------GC----------AGCAACACCATCAG---------------------------------------------------------------------------------CAGCAGCAACACCATCA------G------------------------------------------------------------------------------------------CAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------G-----------------C------------------------------------------------------AACACCACC------------AACAGC---------------------AACAGCAGCAGCAGCAACAACTCACCAGCAATATGAGC-------C
droRho1 scf7180000780001:4656-4910 - CAGCAATTTCTTCAGCAAC-----AGCAACTGCA------------------------ACAGCAATTTC-----------A------------------------------------------------ACTT---CCA-CAGCAGCAACAACAAC------------------------TTCAGCAG------------------CAACAGC------A------------------------ACTTCAGCAGC------------------A---AC---------------------------AGCAATTGCAGCAGCAACAACAACTTCAGCAAC---------------------------------AGA----------------------------------------TCCTGCAGC----------AACAGCAACTTCAA----------------------------------CAA---------------CAG---------GTCCT--------------------------TCAACAGCAGC------AACTGCAACACCCACAG--CAA----------------------------------------------CTGCA------------------ACT-----------------------------------------------------------------------------------------------------------------------------C-----------------C------------------------------------------------------CA---CAGC------------AACCTC---------AGCT-TC-----------CGCAGCAGCAAC--------AGCAAGAATTACCTCTGATT
droBia1 scf7180000297348:312428-312664 - TACCACAAGCACCACAGGC-----ACCACAAACA------------------------TCACAAGCATC-----------AA----TCCAACCACAGCAGCAACAGCAACAGCAAC------AG----------------------------------------------------------------------------------CAACA------GCA---ACAGCA---------------AC------AGCAAC------------------------------------------------------AGCAAC------------------------A------------------------------------------------------------------------------------------------------------GCAACAGCAACAGCAACAGCAACAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAACCGCTGCACCCTAAAG---------------AACAGAACTTTCACTTCCAGTTCCCA------------------------------------------------------C--------CAACCAACTAGCCTCATATAGAAA-----------------------------TAC-------------------------ACAGCAAAAGTATAT---------------------AGTAAAATATATAT------------------------------------C
droTak1 scf7180000415703:375803-376038 - CACGAGCATTTCCGGCAAC-----AATAGT---C----CCT-----------------CGGGAACGGCTTCATTAACGGGA----------------------CAGCAGCAGCAGC------AGCAGCAACAT---CAGC-------------------------------------------------------------------A---AC---ACCCC------------------------------------------------------------------------------------------CACCAGCAACATCAGC------------AACACCAGCAGCAGCAACACG---------------------------------------CAGCCTCG-------------------ACCACGCCAGTGCC---------------------------------------------AATTAACAGCTGCC-------------------------------------------------------------------------------------------------CCACGCCCACAGGACACAGCCCCCT-------------------TAGCAGCAGCAACA-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AACAACAGC------------AACAAT---------------------AATAACAATAATAGCAGC---------------------------A
droEug1 scf7180000409154:183597-183878 + CAGCAACAACAACTTCATG-----GTCAGACGCA--G-CCATTAACGCCAGCTATTCA------ACACC-----------AAAT------TCAGCAACA------------GC---------A------TCAG---GCC-CAGCAGCACCATCAAGCACAGCAGCAACATCAGCCA------------------------------------------C---A------A------------------C---AAC------------------A---GAACCAAAACCAGCCACAGCTGAGCC---A------------GCAAC---------------------------------ATCATTCTCAGCAACAACATC---------------------AGGTTCAGA-------AA-------------------------------------------------------------------------------------------------------------------CAGCTTCAGGCTCA------G-CAACAGTTCA-----------------------------------------------------ACCAACACCAGGCACATCAGCAAATTCAGCCTCAGCA-----------------------------------------------------------------------------------------------------------------------------G-----------------C------------------------------------------------------AGCAGTTGA------------ACCAGC---------------------AACAACAATCACAGC--A---------------------------A
dm3 chr2L:12352016-12352263 + TC--------TGCACGCGG-----ATAAACTAAG------------------------CGGCAA----------------------TTCACCAG------------CAGCAGCAGC------AGCA---ACTGGAGCAGC-------------------AGCAGCAACATCAGAGG---------------------------------------------------------------------C---------AACAGC------------AGTAGC---------------------------ATCCGCAGCAGCAGCAACAACAATGCTTGCAAC---------------------------------GGC----------------------------------------ACCTGTTGCCCATGTTGCTAATGGC---------------------------------------------AA-CAACAGCAATTCGAGTGCCGGCAG-----------------C------------------AGCAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------ACCACAGC------------------------CTC----------------------------------------------------------------------------------------------------------TACAGC------------AATAA---------------------CAATTTAAATACAGGCAAC---------------------------A
droSim2 2r:4706797-4707029 - CCATGA--TCTTCACTCGG-----AC-AGCAG----------------------------------------------------CAG------------CCAACAGCAGCAGCAGC------AGCAGCAACAG---CAGC----------------------------------------------------------AGC------A---GC---AACACCAGCAGCA---------------GC---------ATCAGCAGCAACAGCAACG---GACGCAGACCAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTCAGCCGACGC-------------------------------------------------------------------------------------------------------AGCAGCAACACTACACCCACGACCACAGCACAGTGCATCCC-------------------GAGCAGCA--------------------------------------------------GGTGCCCA-------------------------------------------------------------------CCTACAT-----------------AGAGC-----------------------------TGA-------------------------CCAACAGCAA---------------------TCGTCCAGCGGCCCTAGGTTC---CGAG---------------------------A
droSec2 scaffold_0:12659270-12659491 - CACCCC----TCCTCGGGGTCCGAATAAAAAGCG-----------------CAAATAA------ATA-----------------------TGAG------------CAGCAGCAGTAGTTGCATGAGCAACAG---CAGC-------------------------------------------------------------------A---GT---AGTTGCAGCAGCAACAGCAGCAGTAGTTG------------------------------------------------------------------CTGCAGCAGCAGCAGC------AAT---------------------AGCAGAAGCA---------------------------------------------------------------------------------------------------------------------------------------GCAACAAG-------------------C------------------CG------AAGCAAAACAAACAACAATGG--CAACAGCAG---------------------------------------------------------------------------------------------------------------------GAAGGCCAAAACAAAAC------------------------CCA--------------------GCCAGG-----------------------------------------------------------------------------------------------------------------------------AATACAAAGCCAAACAAA---------------------------A
droYak3 v2_chrUn_1139:3693-3914 + CACATACAAAACTACAAAG-----GGGAACTGCA------------------------AAACTTCTCAC-----------AC--CAG------------AAAAAAGCAGCAGCGGT------GGCAGCTACAG---CAAC-------------------------------------------------------------------A---ACAACAAT---ACCAGCG---------------GT---------ACCAGC---------------------------------------------------GGC---------------------------AACAACTGCAGCAAC---------------AGC----------------------------------------GCCTG--------------------------------------------TACCAGCGGCAGCAACGGCAA-------------------------------------------------------------------G---------------------CGG--CAACAGCAGC---------------------------------------------------------------------------------------------------------------------ATAA-----CCAGAAA------------------------CCAAAAGACG-------------T--------TGGCAAACAAACCG----------------------------------------CG-------------------------ACGAC------------------------------------AA--AAAAAGCAAGAGGG---------------------------A
droEre2 scaffold_4784:17155620-17155869 + CAGCCTCACCCATTCCGCC-----AGCAACGACA------------------------ACACTACA---------------------------C------------CAGCAACATC------AGCA------------AC-------------------------------------------------AACAGCAACAACTGC---A---AC---ACCAACAGCAGCA---------------GC------------------------------------------------------------------------AGCAGCAGC---------------A------------------------------------------------------------------------------------------------------------GTACCAGCAACATCAGCAGCAACTGC--------AG-CAGCAACAACACCAACACCAACACTATCT-----------------------------------G------------------------------------------------------------------------------------------CAACAGCAGCA--------------------------------ACAGACCCTGCCA----------------CCGCCAC------------------------CCATACAACACCAGCAATACAAC--------------------------------------------------------------ACA-------------------------GCGGCCATA---------------------ACG-CCCACATACCAACAACTCCAACAGC---------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TACCATCATCTCCACAGAG-----GTGAACTGCG------------------------TAACTACTGCC-----------ATTC------TCAGCAGCA------------GC---------AGCAGTAGCAG---CAAC----------------------------------------------------------CAC------A---AC---AAGAACAACAGTA---------------AT---------ATTAGA---------------------------------------------------AGC---------------------------AACAGCAGCA---------------------------------------------------------------------------------------------------GCAGCAGCCACAGCACCAGCAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGCAACTGTCACGATCCTGATGCAGAGCACGGCGAAGACACAGCCGGCGTTCACAGTTCCAACC--------------------------------------------------------------A-----------------AAAGC-----------------------------TCA-------------------------GCAACAATAATAGCC---------------------AGGAAGATATAAATCCTAGCGAG---------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................GA---------------------------------------------------AGC---------------------------AACAGCAGCA---------------------------------------------------------------------------------------------------GCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.081000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GC---------------------------AACAGCAGCA---------------------------------------------------------------------------------------------------GCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GA---------------------------------------------------AGC---------------------------AACAGCAGCA---------------------------------------------------------------------------------------------------GCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................AGCA------------GC---------AGCAGTAGCAG---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GC---------------------------AACAGCAGCA---------------------------------------------------------------------------------------------------GCAGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000010000000000000000000000000000000000000000000000
................................................................................................GCA------------GC---------AGCAGTAGCAG---CAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
CACCATCATCTCCACGGAA-----GTGAACTGCG------------------------TCACGACTGCC-----------ATAC------TCAGTCACA------------GC---------AAGAGCAACAG---CAGC-------------------------------------------------------------------A---GC---AGCAGTAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCGGCAGCGGCAGCGGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCAACTGTCACGATCCTGATGCCGAGCCGGGGCCGGACACAGCGAACGCACACAGCTCCAACCAAAGT------------------------CCG-----GGCCAGA-----AGC--------------------------------------------------------------AC-------------------------------------A---------GCG------GCCATCCGGAGGACAGCAAACTCGTCGAG---------------------------ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................AGCAGTAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
............................................................................................................................GAGCAACAG---CAGC-------------------------------------------------------------------A---GC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAGCGGCAGCGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCGGCAGCGGCAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.................................................................................................................................ACAG---CAGC-------------------------------------------------------------------A---GC---AGCAGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
.................................................................................................................................................................................................................................AGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCGGCAGCGGCAGCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
..........................................................................................................................AAGAGCAACAG---CAGC-------------------------------------------------------------------A---GC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
droGri2
CACCATCATCTCAACGGAG-----GTGAACTGCG------------------------TAACTACTGCC-----------ATAC------TCAGCAGCA------------GC---------AACAGCAACAG---CAAC-------------------------------------------------------------------A---AT---ACAAATAACAATA---------------AA---------AAAAGG---------------------------------------------------AGC---------------------------G------------------------------------------------------------------------------------------------------------ATAGCAGCAGCAGCGTCAGCAGCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGCAACGGCCCCGATCCGGATACGGAGCACGTGGCAGACACAGCAGCCGCACTCAGTCCAAATCACAAT------------------------CGA-----AATCATC-----AGC--------------------------------------------------------------ACA-------------------------ACAATAGTA---------------------GCAATCAGGAGGATATCAATCCCAGCGAA---------------------------CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAACAACAGCAACAACAAC-----TGCAGCAGCA------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCAGCAACAATGGCAGCAACAACAACAGCAACAACAACTGCAGCAG------------------C------------A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGCAACAGCAGCAACAACAGCAGCAACAACAAC---------------------AGCAGCA-------------------------------------------------------GC----------AACAGCAGCATCAG----------------------------------CAA---------------CAGCAACAG--------------------C------------------AGCAGC------GAATGCAACAGCAACAG------------------------------------------------------------------CAACAGCAGCA-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AATTGCAGC------------AACAAC---------------------AACAACAGCAGCAGCAAC---------------------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................AACAATGGCAGCAACAACAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
...............................................................................................AACA------------------------------ACAG---CAA-CAGCAGCAACAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.35707000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCATCAG----------------------------------CAA---------------CAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAAC---------------------------A19200.20400040
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGC------------AACAAC---------------------AACAACAGC.....................................24100.20202000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AACAAC---------------------AACAACAGCAGCA.................................20200.20400040
...........................................................................................................................................................................................................................A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
.................................A------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
.....................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAAC---------------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
...............................................................................................AACA------------------------------ACAG---CAA-CAGCAGCAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGC------------AACAAC---------------------AACAACAG......................................23100.10101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AATTGCAGC------------AACAAC---------------------AACAACAGC.....................................27100.10101000
............................................................................................................................................................................................................................................................................................................AACAACAGCAACAGCAGCAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
.............................................................................................................................................................................CAACAACTGCAGCAG------------------C------------A---------A------------------C---AAT------------------TGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.................................A------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
...........................................................................................................................................................................................................................A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
..................................................................A--------------------------GCAACA------------------------------ACAG---CAA-CAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
............CAACAAC-----TGCAGCAGCA------------------------ACAATTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
...................................................................................................................................................AACAATGGCAGCAACAACAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
...............................................................TGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
....................................................................................................................................................................................................................................................................................A---------------------GCAACAACAGCAACAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
.................................................................................................................................................................................................................................................................................TGCA---------------------GCAACAACAGCAACAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGC------------AACAAC---------------------AACA..........................................19130.08100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG------------------------------------------------------------------CAACAGCAGCA-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AATT..........................................................................................25160.06100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAACAG------------------------------------------------------------------CAACAGCAGC.....................................................................................................................................................................................................................................................................................................24170.06101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAG----------------------------------CAA---------------CAGCAACAG--------------------C------------------AG............................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
........................................................................................................................................................TGGCAGCAACAACAACAGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....ACAGCAACAACAAC-----TGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................AG---CAA-CAGCAGCAACAATGGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................TGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............CAACAAC-----TGCAGCAGCA------------------------ACAATTGCA--------------------------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
...............................................................................................................................................................AACAACAACAGCAACAACAACTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...............................................................TGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................TTGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..............................................................................................................................................................................AACAACTGCAGCAG------------------C------------A---------A------------------C---AAT------------------TG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.................................................................................................................................................................................................................................................................................TGCA---------------------GCAACAACAGCAACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................................................................................................................................AACAACTGCAGCAG------------------C------------A---------A------------------C---AAT------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................................................................................................................................................................................................................T------------------TGCA---------------------GCAACAACAGCAACAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..........AACAACAAC-----TGCAGCAGCA------------------------AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.AACAACAGCAACAACAAC-----TGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.................................A------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---CAA-C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................TGGCAGCAACAACAACAGCAACAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..................................................................................................................................................CAACAATGGCAGCAACAACAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
................................................................................................................................................AGCAACAATGGCAGCAACAACAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..............................................................TTGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAAC---------------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
....................................................................................................................................................ACAATGGCAGCAACAACAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
CAACAACAGCAACAACAAC-----TGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...........................................................................................................................................................................................................................A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................AACAGCAACAACAACTGCAGCAG------------------C------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
......................................................................................................................................................AATGGCAGCAACAACAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................CAGCAGCAACAATGGCAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................AACAACAACAGCAACAACAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................................................................................................................................................GGCAGCAACAACAACAGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.................................A------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---CAA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............................................................................................................................................AGCAGCAACAATGGCAGCAACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..............................................................................................CAACA------------------------------ACAG---CAA-CAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------AACAACAGCAGCAGCAA.............................21200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------CAA---------------CAGCAACAG--------------------C------------------AGCA..........................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
........................................................................................................................................................TGGCAGCAACAACAACAGCAACAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
....AACAGCAACAACAAC-----TGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
................................CA------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---CAA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------AACAAC---------------------AACAACAGCAGCAGCA..............................24200.05101000
.........................................................................................................................................................GGCAGCAACAACAACAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
......................................................................................................................................................................ACAGCAACAACAACTGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AACAAC---------------------AACAACAGCAGCAGC...............................22200.05101000
..............................................................................................................................................................................................................................................................T------------------TGCA---------------------GCAACAACAGCAACAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................................................................................................AACAACAACAGCAACAACAACTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAACAAC---------------------AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.............................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAACAACAAC---------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................................................................................................................................................................................................A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............................................................................................................................................................................CAACAACTGCAGCAG------------------C------------A---------A------------------C---AAT------------------TGCA---------------------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
......................................................................................................................................................AATGGCAGCAACAACAACAGCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.................................................................................................CA------------------------------ACAG---CAA-CAGCAGCAACAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
....................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................................................C------------A---------A------------------C---AAT------------------TGCA---------------------GCAACAACAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.................................A------------------------ACAATTGCA--------------------------GCAACA------------------------------ACAG---C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............AACAAC-----TGCAGCAGCA------------------------ACAATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
............................................................................................................................................................................................................................................................AAT------------------TGCA---------------------GCAACAACAGCAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................AACAACAACTGCAGCAG------------------C------------A---------A------------------C---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..................................................................................................................................................................AACAACAGCAACAACAACTGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............AACAAC-----TGCAGCAGCA------------------------ACAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................................................................................................................................................................................................................................................................................................................ACAACAAC---------------------AGCAGCA-------------------------------------------------------GC----------AACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AATTGCAGC------------AACAAC---------------------AACAG.........................................23200.05101000
........................................................................................................................................................................AGCAACAACAACTGCAGCAG------------------C------------A---------A------------------C---A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
......................................................................................................................................................AATGGCAGCAACAACAACAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
....................................................................................................................................................ACAATGGCAGCAACAACAACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
....................................................................................................................................................................CAACAGCAACAACAACTGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
....................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAAC---------------------AGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.................................................................................................................................................................CAACAACAGCAACAACAACTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................AGCAACAACAACAGCAACAACAACTGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
............................................................AATTGCA--------------------------GCAACA------------------------------ACAG---CAA-CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.............................................................................................................................................................................................................................................................................................................................................AACAAC---------------------AGCAGCA-------------------------------------------------------GC----------AACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------------------------------------------CAACAGCAGCA-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AATTG.........................................................................................20200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAG------------------------------------------------------------------CAACAGCAGC.....................................................................................................................................................................................................................................................................................................21200.05100001
.................................................................................................................................................................................................................................................................................TGCA---------------------GCAACAACAGCAACAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
......................................................................................................................................................AATGGCAGCAACAACAACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
dp5
TACCAAAAACAACAAATGA-----GTGGAATGCACTGCCCATAAAAGC-----------TT--AAAGCA-----------ACAAAAT---------------------------------------GCAACAG---CAAC----------------------------------------------------------AAC------A---AC---TGT---AAAAACAAGA------------AC------------------------------------------------------------AGCAACAGCAACAGCAACAGCAAAAACAAC---------------------AACATTAGCA-------------------------------------------------------GC----------A-------------------------------------------------------------------ACAACACCATAATTTGTATACAAAACGC------------------AA------AAGAAGAAGAAACAGCAGCAGCGCAGCAGCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------AAA-------------------------GCAGCAATG---------------------ACA---------------------GAC---------GTGA----------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................C------------------------------------------------------------AGCAACAGCAACAGCAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
droPer2
GGCGATC----CAGCAGCAGGCGATCCAGCAGC------------------------------ATCACC-----------A------------------------------------------------GCAT---CTC-CAGCAGCAACATCATCATCAGCAGCAGCATCAGGCG------------------------------------------C---A------G------------------C---AGC------------------AGGCAC---------------------------AGCAACAGCAGCAGCAACAGCAGGCTCAGCAGC---------------------------------AGG------------CTC-------------------------------AGC----------AACAGCAACAACAA----------------------------------CAG---CAG---------CAACAACAGC--------------------------------------AACAAC------AACAGCAACAACAGCAG--CAA-------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC------------AGCAGCAACAACAACAGCA-GC-----AACAGAAGCTAAAGC--A---------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................ATCCAGCAGC------------------------------ATCACC-----------A------------------------------------------------GCAT---CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................CAGCAACATCATCATCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.402200000
................................................................................................................................................AGCAACATCATCATCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------AACAGCAACAACAGCAG--CAA-------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.........................................................................................2650.201010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAG--CAA-------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.........................................................................................2390.111010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--CAA-------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC------------AGCAGCAACA...............................................................22200.102002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------AACAGCAACAACAGCAG--C..............................................................................................................................................................................................................................................................................................................................................................................23110.091001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAG--CAA-------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................21200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAA----------------------------------CAG---CAG---------CAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGCA-G....................................................20200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AGCAGCAACAACAACAGCA-GC-----..............................................22200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA----------------------------------CAG---CAG---------CAACAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGCA-GC-----AACA..........................................22200.051001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------------AGCAGCAACAACAACAGCA-GC-----A.............................................26200.051001000
droAna3
CAACAACAGCTGCAA-------------------------------------------------------------------------------------------------------------CAGCAACAG---CAGC-------------------------------------------------------------------A---AC---TGCAACAACAGCA---------------AC---------TCCAGC---------------------------------------------------AGCAGCAGCAGCAGC------------AGCAGCAACAACAGCAACAGC------A------A---------------------------------ATGGTGGTGC-------------------------------CAC-------------------------------------------------CAGCTCCACCACAACCTGCACCACCGC--C------------------ACC-------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAACCAAA--------------------------------------------------------------------------------GATAGTGAATACTTTTACGGAAATCCCCGGCACCACGGGCGTTGGCAGCTCCTATGCCA-----------------AGG---------------------AGCAGCAGCAGCAGCAAC----------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATGCCA-----------------AGG---------------------AGCAGCAGC.....................................2111.001001000
...................................................................................................................................................................................................................................................................................................................................................................ACAGC------A------A---------------------------------ATGGTGGTGC-------------------------------CAC-------------------------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................GC-------------------------------------------------------------------A---AC---TGCAACAACAGCA---------------AC---------TCCAGC---------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGAATACTTTTACGGAAATCCC.......................................................................................................................2611.001010000
......................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAACAGC------A------A---------------------------------ATGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................AACAACAGCA---------------AC---------TCCAGC---------------------------------------------------AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGGCGTTGGCAGCTCCTATGCC........................................................................................2411.001000001
..................................................................................................................................................................................................................................GCA---------------AC---------TCCAGC---------------------------------------------------AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.202200000
.................................................................................................................................................................................................................................AGCA---------------AC---------TCCAGC---------------------------------------------------AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141100000
.............................................................................................................................AGCAACAG---CAGC-------------------------------------------------------------------A---AC---TGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141000100
....................................................................................................................................................................................................................................A---------------AC---------TCCAGC---------------------------------------------------AGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141000001
....................................................................................................................................................................................................................................A---------------AC---------TCCAGC---------------------------------------------------AGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000100
.................................................................................................................................................................................................................................................................................................................................AGCAGC------------AGCAGCAACAACAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---------------------AGCAGCAGCAGCAGCAAC----------------------------20100.101010000
.....................................................................................................................................................................................................................................................C---------TCCAGC---------------------------------------------------AGCAGCAGCAGCAGC------------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.101100000
....................................................................................................................................................................................................................................................AC---------TCCAGC---------------------------------------------------AGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091000001
............CAA-------------------------------------------------------------------------------------------------------------CAGCAACAG---CAGC-------------------------------------------------------------------A---AC---T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071100000
.....................................................................................................................................................................................................................................................C---------TCCAGC---------------------------------------------------AGCAGCAGCAGCAGC------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.071010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------AGCAGCAGCAGCAGCAAC----------------------------19170.061010000
................................................................................................................................................................................................................................................................................................................................CAGCAGC------------AGCAGCAACAACAGCAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27170.061100000
.................................................................................................................................................................................................................................................................................................................................AGCAGC------------AGCAGCAACAACAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
...................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAGCAACAGC------A------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................................................................................................................................................................................................................................GC------------AGCAGCAACAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.............................................................................................................................................................................................................................................................................................................................CAGCAGCAGC------------AGCAGCAACAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.................................................................................................................................................................................................................................................................................................................................AGCAGC------------AGCAGCAACAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
...................................................................................................................................................................................................................................................................GC---------------------------------------------------AGCAGCAGCAGCAGC------------AGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
...................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAGCAACAGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
..............................................................................................................................................................................................................................................................................................................................AGCAGCAGC------------AGCAGCAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
....................................................................................................................................................................................................................................................................C---------------------------------------------------AGCAGCAGCAGCAGC------------AGCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
....................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAACAGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................AGC------------AGCAGCAACAACAGCAACAGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
............CAA-------------------------------------------------------------------------------------------------------------CAGCAACAG---CAGC-------------------------------------------------------------------A---AC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
........................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGC------------AGCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droBip1
CAACGACAACAGCGCCGAC-----AGCCTCTGC--------------------------AGGTGCCGCCGCTCTGACGGGG-AACAG------------GCAACAGCAACATCAGC------AGCAACAGCAG---CAGC-------------------------------------------------------------------A---GC------A------------------------A------------------------------------------------------------------CATTACCAGCAACAGA------AAC---AGCAGCAGCAGCAGCAACATC---------------------------------------CACTTCAGA-------AC-------------------------------CAC-------------------------------------------------CAGCAACATCA-------------------------------------------CAAGAGTGCG--------------------------------------------------------------------------------------------------------------------------GCAGATGCGGCGC---------ATCACTTCCATAAC------------------------CCG--------------------CTCAGC-------------------------AA-------------------------------------------------------------TA------------------------------CACAGTGCAATGAAGTAAATCCC---------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
CAGCAGCATCTCCAGGCGG-----CGGCCCAG---------------------------------------------------------------------------------------------------------------CAGCATCTCCAAG------------------------CTCAGCAGCAGCAGCAGCAGGCGCAGCAAGC------GCA---GCAGCA---------------GC------------------------------------------------------------------------AGCAAC---------------------------------ATCCACACCA---------------------------------------------------------------------------------------------------------------------------------------GCAACACCA-------------------------------------------TCAGGCAGCGGCAGCAGCGGCGG--CAGCAGCAGC---------------------------------------------------------------------------------------------------------------------ATTGCATCATCAAAGCATGCTGTTGACCTCGCCGGGTCTGCCG-----CCCCAGC-----ATG--------------------------------------------------------------CC-------------------------------------A---------TTA------GCCTGCCGCCCGGCGGTAATCCTGGCCAG---------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CAGCAACAGCGACAGGATC-----AGCAGCAGCA------------------------GCAACAGCA--------------------------------------------------------------ACAG----------------------G------------------------ATCAGCAGCAGCAGCAACAACAACAGCAATC------GCA---------A------------------C---AGG------------------AGTC---------------------GGGAC---AACAGCAACAGCAGCAGCAAC---------------------------------------------AAAATCAGCAGCAGCAGCAGCAACAGGA--------------------------------------TCATCAGCAG----------------------------------------CAG---------CAGCAACAAC--------------------------------------AACAAC------AA------------------------------------------------------------------TCGCAACAGCAACAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------G-----------------C------------------------------------------------------AACAGCAGC------------AGCAAG---------------------AACAGAAACCACAGCCAA---------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
CACCAGCAACAGCAGCAAC-----A--------------------------------------------------------------------------------------------------------TCAG---CAA-CAGCAGCAACATCTGCAGCAGCAGCAACATCAGCAA------------------------------------------C---A------G------------------C---AGC------------------A---AC---------------------------ACCATCAGCAGCAACAACAGCAGCAACACCATC---------------------AGCAGCA-------------------------------------------------------GC----------AGCAACACCATCAG---------------------------------------------------------------------------------CAGCAGCAACACCATCA------G------------------------------------------------------------------------------------------CAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------G-----------------C------------------------------------------------------AACACCACC------------AACAGC---------------------AACAGCAGCAGCAGCAACAACTCACCAGCAATATGAGC-------CSizeHit CountTotal NormTotal
No Reads
droRho1
CAGCAATTTCTTCAGCAAC-----AGCAACTGCA------------------------ACAGCAATTTC-----------A------------------------------------------------ACTT---CCA-CAGCAGCAACAACAAC------------------------TTCAGCAG------------------CAACAGC------A------------------------ACTTCAGCAGC------------------A---AC---------------------------AGCAATTGCAGCAGCAACAACAACTTCAGCAAC---------------------------------AGA----------------------------------------TCCTGCAGC----------AACAGCAACTTCAA----------------------------------CAA---------------CAG---------GTCCT--------------------------TCAACAGCAGC------AACTGCAACACCCACAG--CAA----------------------------------------------CTGCA------------------ACT-----------------------------------------------------------------------------------------------------------------------------C-----------------C------------------------------------------------------CA---CAGC------------AACCTC---------AGCT-TC-----------CGCAGCAGCAAC--------AGCAAGAATTACCTCTGATTSizeHit CountTotal NormTotal
No Reads
droBia1
TACCACAAGCACCACAGGC-----ACCACAAACA------------------------TCACAAGCATC-----------AA----TCCAACCACAGCAGCAACAGCAACAGCAAC------AG----------------------------------------------------------------------------------CAACA------GCA---ACAGCA---------------AC------AGCAAC------------------------------------------------------AGCAAC------------------------A------------------------------------------------------------------------------------------------------------GCAACAGCAACAGCAACAGCAACAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAACCGCTGCACCCTAAAG---------------AACAGAACTTTCACTTCCAGTTCCCA------------------------------------------------------C--------CAACCAACTAGCCTCATATAGAAA-----------------------------TAC-------------------------ACAGCAAAAGTATAT---------------------AGTAAAATATATAT------------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
CACGAGCATTTCCGGCAAC-----AATAGT---C----CCT-----------------CGGGAACGGCTTCATTAACGGGA----------------------CAGCAGCAGCAGC------AGCAGCAACAT---CAGC-------------------------------------------------------------------A---AC---ACCCC------------------------------------------------------------------------------------------CACCAGCAACATCAGC------------AACACCAGCAGCAGCAACACG---------------------------------------CAGCCTCG-------------------ACCACGCCAGTGCC---------------------------------------------AATTAACAGCTGCC-------------------------------------------------------------------------------------------------CCACGCCCACAGGACACAGCCCCCT-------------------TAGCAGCAGCAACA-----------------------------------------------------------------------------------------------------------------------------A-----------------C------------------------------------------------------AACAACAGC------------AACAAT---------------------AATAACAATAATAGCAGC---------------------------ASizeHit CountTotal NormTotal
No Reads
droEug1
CAGCAACAACAACTTCATG-----GTCAGACGCA--G-CCATTAACGCCAGCTATTCA------ACACC-----------AAAT------TCAGCAACA------------GC---------A------TCAG---GCC-CAGCAGCACCATCAAGCACAGCAGCAACATCAGCCA------------------------------------------C---A------A------------------C---AAC------------------A---GAACCAAAACCAGCCACAGCTGAGCC---A------------GCAAC---------------------------------ATCATTCTCAGCAACAACATC---------------------AGGTTCAGA-------AA-------------------------------------------------------------------------------------------------------------------CAGCTTCAGGCTCA------G-CAACAGTTCA-----------------------------------------------------ACCAACACCAGGCACATCAGCAAATTCAGCCTCAGCA-----------------------------------------------------------------------------------------------------------------------------G-----------------C------------------------------------------------------AGCAGTTGA------------ACCAGC---------------------AACAACAATCACAGC--A---------------------------ASizeHit CountTotal NormTotal
No Reads
dm3
TC--------TGCACGCGG-----ATAAACTAAG------------------------CGGCAA----------------------TTCACCAG------------CAGCAGCAGC------AGCA---ACTGGAGCAGC-------------------AGCAGCAACATCAGAGG---------------------------------------------------------------------C---------AACAGC------------AGTAGC---------------------------ATCCGCAGCAGCAGCAACAACAATGCTTGCAAC---------------------------------GGC----------------------------------------ACCTGTTGCCCATGTTGCTAATGGC---------------------------------------------AA-CAACAGCAATTCGAGTGCCGGCAG-----------------C------------------AGCAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------ACCACAGC------------------------CTC----------------------------------------------------------------------------------------------------------TACAGC------------AATAA---------------------CAATTTAAATACAGGCAAC---------------------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGTTGCTAATGGC---------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------ACCACAGC------------------------CT......................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------ACCACA..................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................AGCAGC-------------------AGCAGCAACATCAGAGG---------------------------------------------------------------------C---------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GC----------------------------------------ACCTGTTGCCCATGTTGCTAATGGC---------------------------------------------AA-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCCGCAGCAGCAGCAACAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGAGTGCCGGCAG-----------------C------------------..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCCATGTTGCTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGTGCCGGCAG-----------------C------------------AGCAGC------AAC...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTGCCGGCAG-----------------C------------------AG............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGC---------------------------------------------AA-CAACAGCAATTCGAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGAGTGCCGGCAG-----------------C------------------AGC...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................C------AGCA---ACTGGAGCAGC-------------------AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGCAGCAACATCAGAGG---------------------------------------------------------------------C---------AA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------ACCAC...................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAG------------------------------------------------------------------CA------AC.....................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCGGCAG-----------------C------------------AGCAGC------A.................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGC---------------------------------------------AA-CAACAGCAATTTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACAGCAACAGCAGCAG------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------ACCACAGC------------------------........................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AGCAGC------AACAGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.......................................................................................................................................GCAGC-------------------AGCAGCAACATCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
...............................................................A----------------------TTCACCAG------------CAGCAGCAGT------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CCGCAGCAGCAGCAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAG-----------------C------------------AGCAGC------AACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................19170.0610000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------A......................................................................................................................................................................................................................................................................................................26180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AACAGCAACAGCAGCAG------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAGCAG------------------------------------------------------------------CA------AC.....................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------C------------------AGCAGC------AACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------........................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCAG------------CAGCAGCAGC------AGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------AC......................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................AGCAGC-------------------AGCAGCAACATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCAG------------CAGCAGCAGC------AGCA---AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CCAG------------CAGCAGCAGC------AGCA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-----------------C------------------AGCAGC------AACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-----------------C------------------AGCAGC------AACAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------A......................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AGCAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------A..............................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------AC......................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AACAGCAACAGCAGCAG------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------.......................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AGCAGC------AACAGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-----------------C------------------AGCAGC------AACAGCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGCAGCAGCAGCAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................TCACCAG------------CAGCAGCAGC------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------AACAGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AGCAGC------AACAGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................CACCAG------------CAGCAGCAGC------AGCA---A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAG------------------------------------------------------------------CA------A......................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAG------------CAGCAGCAGC------AGCA---AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------AC.....................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACAGCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------........................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAGCAG------------------------------------------------------------------CA------ACA------------------------------------------------------------........................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCATGA--TCTTCACTCGG-----AC-AGCAG----------------------------------------------------CAG------------CCAACAGCAGCAGCAGC------AGCAGCAACAG---CAGC----------------------------------------------------------AGC------A---GC---AACACCAGCAGCA---------------GC---------ATCAGCAGCAACAGCAACG---GACGCAGACCAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTCAGCCGACGC-------------------------------------------------------------------------------------------------------AGCAGCAACACTACACCCACGACCACAGCACAGTGCATCCC-------------------GAGCAGCA--------------------------------------------------GGTGCCCA-------------------------------------------------------------------CCTACAT-----------------AGAGC-----------------------------TGA-------------------------CCAACAGCAA---------------------TCGTCCAGCGGCCCTAGGTTC---CGAG---------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC-------------------------------------------------------------------------------------------------------AGCAGCAACACTACA...............................................................................................................................................................................................................................................................................................................................................................1821.50300000300000000000
....................................................................................................................................................................................................................................................................CAGCAACAGCAACG---GACGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.....................................................................................................................................................................................................................................................................AGCAACAGCAACG---GACGCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...........TCACTCGG-----AC-AGCAG----------------------------------------------------CAG------------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
droSec2
CACCCC----TCCTCGGGGTCCGAATAAAAAGCG-----------------CAAATAA------ATA-----------------------TGAG------------CAGCAGCAGTAGTTGCATGAGCAACAG---CAGC-------------------------------------------------------------------A---GT---AGTTGCAGCAGCAACAGCAGCAGTAGTTG------------------------------------------------------------------CTGCAGCAGCAGCAGC------AAT---------------------AGCAGAAGCA---------------------------------------------------------------------------------------------------------------------------------------GCAACAAG-------------------C------------------CG------AAGCAAAACAAACAACAATGG--CAACAGCAG---------------------------------------------------------------------------------------------------------------------GAAGGCCAAAACAAAAC------------------------CCA--------------------GCCAGG-----------------------------------------------------------------------------------------------------------------------------AATACAAAGCCAAACAAA---------------------------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CACATACAAAACTACAAAG-----GGGAACTGCA------------------------AAACTTCTCAC-----------AC--CAG------------AAAAAAGCAGCAGCGGT------GGCAGCTACAG---CAAC-------------------------------------------------------------------A---ACAACAAT---ACCAGCG---------------GT---------ACCAGC---------------------------------------------------GGC---------------------------AACAACTGCAGCAAC---------------AGC----------------------------------------GCCTG--------------------------------------------TACCAGCGGCAGCAACGGCAA-------------------------------------------------------------------G---------------------CGG--CAACAGCAGC---------------------------------------------------------------------------------------------------------------------ATAA-----CCAGAAA------------------------CCAAAAGACG-------------T--------TGGCAAACAAACCG----------------------------------------CG-------------------------ACGAC------------------------------------AA--AAAAAGCAAGAGGG---------------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGCGGCAGCAACGGCAA-------------------------------------------------------------------G---------------------CGG--C..............................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEre2
CAGCCTCACCCATTCCGCC-----AGCAACGACA------------------------ACACTACA---------------------------C------------CAGCAACATC------AGCA------------AC-------------------------------------------------AACAGCAACAACTGC---A---AC---ACCAACAGCAGCA---------------GC------------------------------------------------------------------------AGCAGCAGC---------------A------------------------------------------------------------------------------------------------------------GTACCAGCAACATCAGCAGCAACTGC--------AG-CAGCAACAACACCAACACCAACACTATCT-----------------------------------G------------------------------------------------------------------------------------------CAACAGCAGCA--------------------------------ACAGACCCTGCCA----------------CCGCCAC------------------------CCATACAACACCAGCAATACAAC--------------------------------------------------------------ACA-------------------------GCGGCCATA---------------------ACG-CCCACATACCAACAACTCCAACAGC---------------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......CACCCATTCCGCC-----AGCAACGACA------------------------AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
......................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------GTACCAGCAACATCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAC--------------------------------------------------------------ACA-------------------------GCGGCCATA---------------------AC.......................................................2111.0010000100
....................................................................................................................................................................................................................................A---------------GC------------------------------------------------------------------------AGCAGCAGC---------------A------------------------------------------------------------------------------------------------------------GTACCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.6721000010
...............................................................................................................................................................................................................A---AC---ACCAACAGCAGCA---------------GC------------------------------------------------------------------------AGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.5021000100
..........................................................................................................................................................................................................GC---A---AC---ACCAACAGCAGCA---------------GC------------------------------------------------------------------------AGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000100
.................................................................................................................ATC------AGCA------------AC-------------------------------------------------AACAGCAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000
...............................................................................................................................................................................................................A---AC---ACCAACAGCAGCA---------------GC------------------------------------------------------------------------AGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2511000000
...........................................................................................................................................................................................................................AACAGCAGCA---------------GC------------------------------------------------------------------------AGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040004000
.........................................................................................................................................................................................................................CCAACAGCAGCA---------------GC------------------------------------------------------------------------AGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..............................................................................................................................................................................................................................AGCAGCA---------------GC------------------------------------------------------------------------AGCAGCAGC---------------A------------------------------------------------------------------------------------------------------------GTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010

Generated: 05/19/2015 at 03:56 PM