ID:

dvi_9549

 Coordinate:

scaffold_12932:1917538-1917688 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.4 -8.1

Flybase annnotation

exon [dvir_GLEANR_14947:3]; CDS [Dvir\GJ14707-cds]; intron [Dvir\GJ14707-in]; Antisense to intron [Dvir\GJ14882-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCTATTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGACGAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAGCGATGGGACCTATATACTCTAGCTGTATATAGGTAGCAATATATTGTATAATTCCAAATGCCCGCCACACACACTAAAATCAAACACACACACACACGCACACACACACACATTGTTGTAGTTGCAACAGCAAAGACTTGAATACACACACA
****************************************************..((...(((..((.(((.((((....)))).))))).)))......)).............***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 M061
embryo
 SRR060656
9x160_ovaries_total
 SRR060658
140_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 GSM1528803
follicle cells		 SRR060682
9x140_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
........................................................................................CAACTGATAAGCGATGGGACCTATAT......................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ACACACATTGTTGTGGTTGCA.......................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GCATTTGATCAGCTGATAAGC....................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTATTGGTGCCGTTACGGCAGTCGCC................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTAGTTGCAACAGCAAAGACT.............. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TGGTGCCGTTACGGCAGTCGC................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................AGTCGCCAGCAGGATGTGCGC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................CAACTGATAAGCGATGGGACCTATATA........................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................ATCAACTGATAAGCGATGGGACCTAT........................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................AAGCGACAGGTAACGACGAGTG............................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................ATCAACTGATAAGCGATGGGA................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TTGATCAACTGATAGGCGAT.................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AACGACGAGTGCGAATCACGTGCTG.............................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................ATCAACTGATGGGCGATGGGGC............................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................GATAAGCGATGGGACCTATAT......................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......GTGCCGTTACGGCAGTCGCCA............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CAGCAGGATGTGCGCAAGCGA............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TATTGGTGCCGTTACGGCAGTCGCCGG.............................................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACTGATAAGCGATGGGACCT............................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CGCAAGCGACAGGTAACGACGAGTGC........................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................ACAGGTGGCGACGAGTGCGAGT....................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CAACTGATAAGCGATGGGACC.............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TGCATTTGATCAACTGATAAGCGATG................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................CAGGCAGCGACGAGTGCGA......................................................................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................ATTCGATCAACTGATA.......................................................................................................................................................... 16 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................GCAAGAGGTGCGCAATCGAC........................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................GCAAGATGTGCACAATCGAC........................................................................................................................................................................................................... 20 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GCAGGAGGTGCACAATCGAC........................................................................................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................CAAACACACACACACACGCAC................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACACACACACACACGCACACACACA............................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGATAACCACGGCAATGCCGTCAGCGGTCGTCCTACACGCGTTCGCTGTCCATTGCTGCTCACGCTTAGTGCACGACGACGTAAACTAGTTGACTATTCGCTACCCTGGATATATGAGATCGACATATATCCATCGTTATATAACATATTAAGGTTTACGGGCGGTGTGTGTGATTTTAGTTTGTGTGTGTGTGTGCGTGTGTGTGTGTGTAACAACATCAACGTTGTCGTTTCTGAACTTATGTGTGTGT
*****************************************************************************************************************************************..((...(((..((.(((.((((....)))).))))).)))......)).............**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 M047
female body
 SRR060676
9xArg_ovaries_total
 V116
male body		 SRR060655
9x160_testes_total
 SRR060659
Argentina_testes_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060675
140x9_ovaries_total
 M028
head
 M061
embryo
 SRR060678
9x140_testes_total
...............................................................GCTTAGTGCAGGAAGACGTAA....................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTGATTTTAGTTTGTGTGTGT............................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CAACGTTGTCGTTTCTGAACT........... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................CTGTCCATTGCTGCTCACGCT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TGTCAGCGGTCGTCCTACA...................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GACGTAAACTAGTTGACTATT......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CGACGACGTAAACTAGTTGA.............................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GATTTTAGTTTGTGTGTGTGC.......................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CGCTGTCCGTTGCTGCTCACG........................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CTACCCTGGGTATATGAGGTC.................................................................................................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GTGTGTGTGTGTGTAACAACA................................. 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................ATCGACACATATCCAACGTTACA.............................................................................................................. 23 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GTGTGCGTGTGTGTGTGTGTA....................................... 21 0 20 0.30 6 0 0 0 5 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................CTGTGTTTGTGATTTTAGTTT.................................................................... 21 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................CGTTCTCGCTTCTGAACTTAC........ 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................GTGCGTGTGTGTGTGTGT........................................ 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................GTGTGTGCGTGTGTGTGT............................................ 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
.......................................................................................................................................................AGTTTGACGGGCGGTCTGTG................................................................................ 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TGAGATCGACTTATAGCCG...................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................AGTGCACGGCGACGTATA...................................................................................................................................................................... 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................GTGTGCGTGTGTGTGTGTG......................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................TGTGTGTGTGCGTGTGTGTGT............................................ 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CCGACGACGTAAACAAGT................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................TGTGTGCGTGTGTGTGTGTGTA....................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................TGTGCGTGTGTGTGTGTGTA....................................... 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12932:1917488-1917738 - dvi_9549 TCTATTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGACGAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAGCGATGG--------GACCT----A---------------------------------------------------------------------------TATACTC--TAGCTGTATAT------AGG-------TAGCAATATA---------------------------------------------------------------TTGTATAATTCCAAATGCCCGCCA----------------------------------------------------------------------------------------------------CACACACTAAAATCAAACACACACACAC----------------------------ACGCACACACAC---------------------------------------ACACATTGTTGTAGTTGCAAC--------------AGCAAA---------------------------------------GACTTGAATACACACACA
droMoj3 scaffold_6473:5479167-5479418 - TGTACTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGACGAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAGCGACGC---------ACCT----A---------------------------------------------------------------------------TATACTC--TAGCTGTATAT------AGG-------TAGTATCACA-------------------------------------------------------------TTCTGTAT-ATTCCAAATGCCCGCCA----------------------------------------------------------------------------------------------------CACA-------------CACACACACAC----------------------------AA--ACACA----CACACA----TAG------ACAACTAACATACACATGAACACATTGTTATAGGTGCAAC--------------AGCAAA------------------------------------------------GCACACACA
droGri2 scaffold_15203:1942416-1942664 + TGTACTGGTGCCGCTATGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACCACGAGTGCTAATCACGTGCTGCTGCATTTGATCAACTGATAAGTT-TGC---------ACCTATCTA---------------------------------------------------------------------------TATACTCTTTAATTGTATAT------AGG-------TA------------------------------------CGAAACACA-------------------CAACTTTATGTAT-ATTCCAAATGCCCGCCA----------------------------------------------------------------------------------------------------CACACA---AAATTAATC-----CTCA-AC---CCC-----------------------GACACACACA----CGCA--TAG------------------------------TTGCAGCAGTTGCAGC--------------AGCAAA---------------------------------------AAC---------TTTACA
droWil2 scf2_1100000004909:7107402-7107670 - TATATTGGTGTCGTTATGGTAGTCGTCAGCAGGATGTTCGCAAGCGACAGGTAACGACGAGTGCGAATCATGTGCTGCTGCATTTGATTAATTGATTTA------------------------ATCAACATACA--------CAAACGCCCACACACACACACACACACCTCATATACATACACATACAAACATTTTGTATACATATAAATTGTATGT------ATG-------TG------------------------------------TAAAAGAAA-------------------TAT-------------------------------------------------------------------------CAACA--------------------------------TTTATCAATTC-----------------------------------CT---TTC-----------------------GCC-TCCACA-----------------------------------TGCATTAATATGTTTAAGTATAGC--------------ACC------------------------------------------AAC---------TACACA
dp5 XL_group1e:8447872-8447972 - TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGCAAGCGACAGGTAACGACGAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_13:126208-126395 + TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGAAAGCGACAGGTAACGACGAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAACGGAGC--------A---------AGCAGCGGAGG--------CCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------CCCACACACAC----------------------------A--CACACACACA----CACAT--AGAGAGAGAGA-------------------------GAGAGAGAGAGA--------------AGGAA------------------------------------------------AACACACATA
droAna3 scaffold_12903:489109-489322 + dan_368 TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAACAAGTGCGAATCACGTGCTCCTGCACCTGATCAATTGATAAGCGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGCCACGCCCCCGTCACCAGCTGGGGGGATTCAAAAAAAAAAAAAAACAAAAAAAGCAGCG------------------------------------------------CCCAACATACA-------------CCTACACACAC----------------------------AG--ACACA----CACACACAC----------------------------------------------------------------------------------------------------------------------ACACACACA
droBip1 scf7180000395952:54102-54202 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAACAAGTGCGAATCATGTGCTCCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301542:306780-307086 + TCTATTGGTGTCGGTACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTACTGCACCTGATCAATTAATAGGCGGCGGAGCTCAGAC---------AGCCAGCAAAAA----GAAT--------------------------------------------------AATTATAT---------------AT------A--------------------------------------------------------TATATATCGCCGATTCGGAGAC-------------------------------------------------------------------------CAACATAATTGCCA----ATCCTCTTATCCCCTCCTCCTTCCCACCTC-----------------------------------CTGCTCCTGCGCCACTACCAACCCAACCA--TTCACATACA-----------------------------------TATATTGATTGTTATAGTTGCAGCATCCAAAAAAAAATAGTAAA---------------------------------------AACATAA-AACACATACA
droFic1 scf7180000454073:898521-898871 + TCTACTGGTGTCGATATGGGAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACCACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCGAAGT--------C---------AGCCGGCAAAAAACAAAAAA--------------------------------------------------AATTCTAC---------------AAAAAAAAAAACAGAAATGAAGAAAAGAATGAAGGCCAGGAGCAAAAAAAAAAGCA---------CATGAAGCTCCGACACAGAAAC-------------------------------------------------------------------------CCAAAT--TTGCCACACAACCACCTTCTTCTCCCTTTTCCCCCACCTC-----------------------------------CC---CCC-----------------------GCCACCCACA-----------------------------------TGCATTGATTGTTGTAGTTGCAGC--------------AGCAAAAAAAAGAAAGAAAATTCCTTAAAAAAAAGGCTATGTAAAAAC---------CACACA
droEle1 scf7180000491011:431144-431241 - TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000776513:17794-17894 + TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302041:1147320-1147420 - TGTACTGGTGTCGATACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414562:72044-72144 + TCTACTGGTGTCGATACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409008:512057-512158 - TCTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:14100346-14100444 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGAAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:13312173-13312271 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_20:704879-704977 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGTAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAACTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:15226958-15227128 - CTG--CGGCATCCTTTTACCAGGGAACGATAAAACTTACATGAGCTTGGAT-------------------------------------------------------------------------------------------------------------------------------------------------------CTC--TGGCAATATGC------AAA-------CAGTAATTGAATTAATGCCATGAGCCAAACGAAATGTT---------GA---------------------------------------------------------------------------------------------------------------------------------------------CCGAACCTACA-------------CCCACACTCAC----------------------------AC--CCACA----CACACACCCACAG------------------------------CCGC-GCAC---------------------------------------------------------------------CCACAGCCACACACC
droEre2 scaffold_4690:12830045-12830143 + TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGACTTGCGGAAGCGACAGGTAACGACGAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCTATTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGACGAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAGCGATGG--------GACCT----A---------------------------------------------------------------------------TATACTC--TAGCTGTATAT------AGG-------TAGCAATATA---------------------------------------------------------------TTGTATAATTCCAAATGCCCGCCA----------------------------------------------------------------------------------------------------CACACACTAAAATCAAACACACACACAC----------------------------ACGCACACACAC---------------------------------------ACACATTGTTGTAGTTGCAAC--------------AGCAAA---------------------------------------GACTTGAATACACACACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................CAACTGATAAGCGATGG--------GACCT----A---------------------------------------------------------------------------TAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000200000000000000000000000000
.CTATTGGTGCCGTTACGGCAGTCGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGTTGCAAC--------------AGCAAA---------------------------------------GACT..............2211.001000000000000000000000000001000000000000000000000000000000000000
.....TGGTGCCGTTACGGCAGTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................AGTCGCCAGCAGGATGTGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
........................................................................................CAACTGATAAGCGATGG--------GACCT----A---------------------------------------------------------------------------TATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................ATCAACTGATAAGCGATGG--------GACCT----A---------------------------------------------------------------------------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................AAGCGACAGGTAACGACGAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
......................................................................................ATCAACTGATAAGCGATGG--------GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................AACGACGAGTGCGAATCACGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................GATAAGCGATGG--------GACCT----A---------------------------------------------------------------------------TAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.......GTGCCGTTACGGCAGTCGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................CAGCAGGATGTGCGCAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................AACTGATAAGCGATGG--------GACCT----..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................CGCAAGCGACAGGTAACGACGAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................CAACTGATAAGCGATGG--------GACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
..............................................................................TGCATTTGATCAACTGATAAGCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACACACACAC----------------------------ACGCAC...............................................................................................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACACACACAC----------------------------ACGCACACACAC---------------------------------------A.................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGTACTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGACGAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAGCGACGC---------ACCT----A---------------------------------------------------------------------------TATACTC--TAGCTGTATAT------AGG-------TAGTATCACA-------------------------------------------------------------TTCTGTAT-ATTCCAAATGCCCGCCA----------------------------------------------------------------------------------------------------CACA-------------CACACACACAC----------------------------AA--ACACA----CACACA----TAG------ACAACTAACATACACATGAACACATTGTTATAGGTGCAAC--------------AGCAAA------------------------------------------------GCACACACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................C--TAGCTGTATAT------AGG-------TAGTATCACA-------------------------------------------------------------TTCT.......................................................................................................................................................................................................................................................................................................................................2911.001100000
......................................................CGACGAGTGCGAATCACGTGCTGCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................ATTTGATCAACTGATAAGCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
.............................CAGGATGTGCGCAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................CTC--TAGCTGTATAT------AGG-------TAGTATCAC.........................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................AGCAGGATGTGCGCAAGCGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
................................................................GAATCACGTGCTGCTGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................TGATCAACTGATAAGCGACGC---------ACCT----A---------------------------------------------------------------------------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......................................................................................................................................................................................................ATACTC--TAGCTGTATAT------AGG-------TAGT..............................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................GACAGGTAACGACGAGTGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
TGTACTGGTGCCGCTATGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACCACGAGTGCTAATCACGTGCTGCTGCATTTGATCAACTGATAAGTT-TGC---------ACCTATCTA---------------------------------------------------------------------------TATACTCTTTAATTGTATAT------AGG-------TA------------------------------------CGAAACACA-------------------CAACTTTATGTAT-ATTCCAAATGCCCGCCA----------------------------------------------------------------------------------------------------CACACA---AAATTAATC-----CTCA-AC---CCC-----------------------GACACACACA----CGCA--TAG------------------------------TTGCAGCAGTTGCAGC--------------AGCAAA---------------------------------------AAC---------TTTACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TATATTGGTGTCGTTATGGTAGTCGTCAGCAGGATGTTCGCAAGCGACAGGTAACGACGAGTGCGAATCATGTGCTGCTGCATTTGATTAATTGATTTA------------------------ATCAACATACA--------CAAACGCCCACACACACACACACACACCTCATATACATACACATACAAACATTTTGTATACATATAAATTGTATGT------ATG-------TG------------------------------------TAAAAGAAA-------------------TAT-------------------------------------------------------------------------CAACA--------------------------------TTTATCAATTC-----------------------------------CT---TTC-----------------------GCC-TCCACA-----------------------------------TGCATTAATATGTTTAAGTATAGC--------------ACC------------------------------------------AAC---------TACACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............GTTATGGTAGTCGTCAGCAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
....................................................................................................................................................................................ACACATACAAACATTTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...........................AGCAGGATGTTCGCAAGCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
............GTTATGGTAGTCGTCAGCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
......................................CGCAAGCGACAGGTAACGACGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...ATTGGTGTCGTTATGGTAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.........GTCGTTATGGTAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................AGGATGTTCGCAAGCGACAGGTAACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.ATATTGGTGTCGTTATGGTAGTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.................................................................................................................................................................................CATACACATACAAACATTTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTATCAATTC-----------------------------------CT---TTC-----------------------GCC-TC............................................................................................................................................2011.00101000
..........................CAGCAGGATGTTCGCAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...............ATGGTAGTCGTCAGCAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........................................AGCGACAGGTAACGACGAGTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
.....TGGTGTCGTTATGGTAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...........CGTTATGGTAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...ATTGGTGTCGTTATGGTAGTCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
dp5
TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGCAAGCGACAGGTAACGACGAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GTACGGTAGCCGCCAGCAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.GTACTGGTGCCGGTACGGTAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................AGCCGCCAGCAGGATGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................AGCGACAGGTAACGACGAGTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
............................................................................GCTCCATCTGATTAACTGATAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................CGCCAGCAGGATGTCCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGAAAGCGACAGGTAACGACGAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAACGGAGC--------A---------AGCAGCGGAGG--------CCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------CCCACACACAC----------------------------A--CACACACACA----CACAT--AGAGAGAGAGA-------------------------GAGAGAGAGAGA--------------AGGAA------------------------------------------------AACACACATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................CGAAAGCGACAGGTAACGACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................TAAACGGAGC--------A---------AGCAGCGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................ATCACGTGCTGCTCCATCTGATTAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--AGAGAGAGAGA-------------------------GAGAGAGA.................................................................................21200.051001000
droAna3
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAACAAGTGCGAATCACGTGCTCCTGCACCTGATCAATTGATAAGCGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGCCACGCCCCCGTCACCAGCTGGGGGGATTCAAAAAAAAAAAAAAACAAAAAAAGCAGCG------------------------------------------------CCCAACATACA-------------CCTACACACAC----------------------------AG--ACACA----CACACACAC----------------------------------------------------------------------------------------------------------------------ACACACACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................GAATCACGTGCTCCTGCACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....CTGGTGCCGCTACGGAAGTCGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.....................GTCGTCAGCAGGATCTGCGCAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................AGCGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGCCACGCCCCC.....................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................TCAATTGATAAGCGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATG...............................................................................................................................................................................................................................................................................................................................2111.001000010
.........GCCGCTACGGAAGTCGTCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............CTACGGAAGTCGTCAGCAGGATCTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...............................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAACAAAAAAAGCA.......................................................................................................................................................................................................................................................................2220.501010000
..............................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAACAAAAA............................................................................................................................................................................................................................................................................18200.153030000
...........................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAACAAAAA............................................................................................................................................................................................................................................................................21200.153030000
...........................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAACAAAAAAA..........................................................................................................................................................................................................................................................................23200.051010000
..............................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAACAAAAAAAG.........................................................................................................................................................................................................................................................................21200.051010000
droBip1
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAACAAGTGCGAATCATGTGCTCCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCTATTGGTGTCGGTACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTACTGCACCTGATCAATTAATAGGCGGCGGAGCTCAGAC---------AGCCAGCAAAAA----GAAT--------------------------------------------------AATTATAT---------------AT------A--------------------------------------------------------TATATATCGCCGATTCGGAGAC-------------------------------------------------------------------------CAACATAATTGCCA----ATCCTCTTATCCCCTCCTCCTTCCCACCTC-----------------------------------CTGCTCCTGCGCCACTACCAACCCAACCA--TTCACATACA-----------------------------------TATATTGATTGTTATAGTTGCAGCATCCAAAAAAAAATAGTAAA---------------------------------------AACATAA-AACACATACASizeHit CountTotal NormTotal
No Reads
droFic1
TCTACTGGTGTCGATATGGGAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACCACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCGAAGT--------C---------AGCCGGCAAAAAACAAAAAA--------------------------------------------------AATTCTAC---------------AAAAAAAAAAACAGAAATGAAGAAAAGAATGAAGGCCAGGAGCAAAAAAAAAAGCA---------CATGAAGCTCCGACACAGAAAC-------------------------------------------------------------------------CCAAAT--TTGCCACACAACCACCTTCTTCTCCCTTTTCCCCCACCTC-----------------------------------CC---CCC-----------------------GCCACCCACA-----------------------------------TGCATTGATTGTTGTAGTTGCAGC--------------AGCAAAAAAAAGAAAGAAAATTCCTTAAAAAAAAGGCTATGTAAAAAC---------CACACASizeHit CountTotal NormTotal
No Reads
droEle1
TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGTACTGGTGTCGATACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTACTGGTGTCGATACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGAAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..TACTGGTGCCGCTACGGAAGTCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....TGGTGCCGCTACGGAAGTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010100100000
...................AAGTCGTCAGCAGGATCTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........GCCGCTACGGAAGTCGTCAGCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010000000
....CTGGTGCCGCTACGGAAGTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000
..............................................................................TGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2113.0030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................AAGCGACAGGTAACGACGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000
...............................................................CCAATCACGTGCTGCTGCACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGCAGGATCTGCGAAAGCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000
.....TGGTGCCGCTACGGAAGTCGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000
.......................CGTCAGCAGGATCTGCGAAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..TACTGGTGCCGCTACGGAAGTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGCCGCTACGGAAGTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000
..........................................................................CTGCTGCACCTGATCAATTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CGACGAGTGCCAATCACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000
...................................................TAACGACGAGTGCCAATCACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CTACGGAAGTCGTCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................CAGCAGGATCTGCGAAAGCGACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..TACTGGTGCCGCTACGGAAGTCGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......GTGCCGCTACGGAAGTCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................GTCGTCAGCAGGATCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................TCAGCAGGATCTGCGAAAGCGACAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................GTCAGCAGGATCTGCGAAAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCCAATCACGTGCTGCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAACGACGAGTGCCAATCACGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............TACGGAAGTCGTCAGCAGGATCTGCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCAGCAGGATCTGCGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ACGTGCTGCTGCACCTGATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTACTGGTGCCGCTACGGAAGTCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGCCGCTACGGAAGTCGTCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................AAGTCGTCAGCAGGATCTGCGAAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTGGTGCCGCTACGGAAGTCGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............CTACGGAAGTCGTCAGCAGGATCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGCAGGATCTGCGAAAGCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCGAAAGCGACAGGTAACGACGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................GCGAAAGCGACAGGTAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCGACAGGTAACGACGAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........GCCGCTACGGAAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........GCCGCTACGGAAGTCGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTACTGGTGCCGCTACGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGTGCCGCTACGGAAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................CAGCAGGATCTGCGAAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCAGGATCTGCGAAAGCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................AGCGACAGGTAACGACGAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................GACGAGTGCCAATCACGTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGTGCCGCTACGGAAGTCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......GGTGCCGCTACGGAAGTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................CGAAAGCGACAGGTAACGACGAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................TGCGAAAGCGACAGGTAACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGTGCCGCTACGGAAGTCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................ACGAGTGCCAATCACGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................TCAGCAGGATCTGCGAAAGCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GTCGTCAGCAGGATCTGCGAAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................TCACGTGCTGCTGCACCTGATCAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAGTCGTCAGCAGGATCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................GAAGTCGTCAGCAGGATCTGCGAAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCAGCAGGATCTGCGAAAGCGACAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......GTGCCGCTACGGAAGTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.GTACTGGTGCCGCTACGGAAGTCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCTACGGAAGTCGTCAGCAGGATCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CGAGTGCCAATCACGTGCTGCTGCACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....CTGGTGCCGCTACGGAAGTCGTCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............CTACGGAAGTCGTCAGCAGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
................CGGAAGTCGTCAGCAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..............................AGGATCTGCGGAAGCGACAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
............................................................GTGCCAATCACGTGCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
..........................................AGCGACAGGTAACGACGAGTGCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
............................GCAGGATCTGCGGAAGCGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
droSec2
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGTAAGCGACAGGTAACGACGAGTGCCAATCACGTGCTGCTGCACCTGATCAACTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CAGCAGGATCTGCGTAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.................................................................AATCACGTGCTGCTGCACCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.......GTGCCGCTACGGAAGTCGTCAGCAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
droYak3
CTG--CGGCATCCTTTTACCAGGGAACGATAAAACTTACATGAGCTTGGAT-------------------------------------------------------------------------------------------------------------------------------------------------------CTC--TGGCAATATGC------AAA-------CAGTAATTGAATTAATGCCATGAGCCAAACGAAATGTT---------GA---------------------------------------------------------------------------------------------------------------------------------------------CCGAACCTACA-------------CCCACACTCAC----------------------------AC--CCACA----CACACACCCACAG------------------------------CCGC-GCAC---------------------------------------------------------------------CCACAGCCACACACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGACTTGCGGAAGCGACAGGTAACGACGAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................AGCAGGACTTGCGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..............TACGGAAGTCGTCAGCAGGACTTGCGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000001
..............................AGGACTTGCGGAAGCGACAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................................GACTTGCGGAAGCGACAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/19/2015 at 03:34 PM