ID:

dvi_9479

 Coordinate:

scaffold_12932:1320243-1320393 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.9 -12.6 -12.3

Flybase annnotation

exon [dvir_GLEANR_14970:1]; CDS [Dvir\T-cp1-cds]; intron [Dvir\T-cp1-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGCAGGATGTGATGCGCACCAATTTGGGACCAAAAGGCACAGTTAAAATGTGAGTACCTTAACTTAAATCTGAGTTTAGAGCACGGCTCCTGCGCGTGCATAAGGATTTGAGGGTTAAAATAATCGCAGCGTTATTATTAACAAACATTTTGCGACAGCTGCGCTGCCGCAGCCGCTGCCCAATTGAGGTTAAAACCGTCGAATAGCGGCATGCGTCATCGAGCGACTGAGATGGCAATAGCGCATGTAG
******************************************************************((((((..((.....(((((((....)).)))))))..))))))......*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 V116
male body		 SRR060687
9_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060654
160x9_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060681
Argx9_testes_total
 M028
head
........................................................................................................................................................................................................................TCATCGAGCGACTGAGATGGC.............. 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TTTAGAGCACGGCTCCTGCGCTA......................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACTGAGATGGCAGTGGCGCAT.... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CATCGAGCGACTGGGATGGCA............. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.TGCAGGATGTGATGCGCACC...................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATTTGGGACCAAAAGGCACA................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GTATGTGATGCGCACCAATTTGG............................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ACAAACATTTTGCGACGGCTGC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AAATCTGAGTTTGGAGCACGG.................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GTGATGCGCACCAATTTGGGACC........................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......ATGTGATGCGCACCAATTTGG............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGTGATGCGCACCAATTTGGGACCAAA........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGTGATGCGCACCAATTTGGGACC........................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........TGTGATGCGCACCAATTTGGGA............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GATGTGATGCGCACCAATTTGGG.............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.TGCAGGATGTGATGCGCACCAATTTGG............................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATTTGGGACCAAAAGGCACAGT............................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................GCACCAATTTGGGACCAAAAGGCACAG................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AAATCTGAGTTTAGAGCACGG.................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAGCGGCATGCGTCATCGAGC.......................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GCAGGATGTGATGCGCACCAATTTGG............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACTGAGATGGCAATGGCGCATG... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CGTGCATAAGGATTTGAGGGT....................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CCGTCGAATAGCGGCATGCG................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..GCAGGATGTGATGCGCACCAC.................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CGCTGCCCAATTGAGGTTGGA........................................................ 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................TGAGCACGTTAACTTAAA...................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
TTGCAGGATGGTATGCGCC........................................................................................................................................................................................................................................ 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................GATTAGAGGGTTCAAGTAA............................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AACGTCCTACACTACGCGTGGTTAAACCCTGGTTTTCCGTGTCAATTTTACACTCATGGAATTGAATTTAGACTCAAATCTCGTGCCGAGGACGCGCACGTATTCCTAAACTCCCAATTTTATTAGCGTCGCAATAATAATTGTTTGTAAAACGCTGTCGACGCGACGGCGTCGGCGACGGGTTAACTCCAATTTTGGCAGCTTATCGCCGTACGCAGTAGCTCGCTGACTCTACCGTTATCGCGTACATC
***************************************************************************************************************************************((((((..((.....(((((((....)).)))))))..))))))......****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060677
Argx9_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V053
head
 V047
embryo
 V116
male body		 SRR060659
Argentina_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060683
160_testes_total
 SRR060675
140x9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106728
larvae
....................................................................................................................................................................................................................ACGCAGTAGCTCGCTGACTCT.................. 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATGGGGTTGAATTTAGACTC................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGGCAGCTTATCGCCGTACG.................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTTATCGCCGTACGCAGTA............................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................ACGTATTCCTAAACTCGCAAT..................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TACGCGTGGTTAAACCCTGGT.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CGGCGTCGGCGACGGGTTAAC................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GCGACGGGTTAACTCCAATTT........................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CGCCGTACGCAGTAGCTCGCT........................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCGCCGTACGCAGTAGCTCGC......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATGGAATTGAATTTAGACT................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AACTTCAAATTTGGCAGC................................................. 18 2 4 0.75 3 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ATTGTTTGTATTACGCTGTCG........................................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................ACGCGCACGTTTTCCTAGATT........................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGGAGCTCGATGACTCTACA............... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................ACAGGGCTGTCGACGCGACGG.................................................................................. 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................AGCTCCAAATTTGGCATCT................................................ 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................GGAGCTCGATGACTCTACA............... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................CCGCAATAATAATTGTTGGCAA..................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AGCTCCAAATTTGGCAGAT................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ATCTTCAAATTTGGCAGC................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................TCATGCAATTGAATTTACC................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................AGCTACAAATTTGGCAGC................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12932:1320193-1320443 - dvi_9479 TTGCAGGATGTGATGCGCACCAATTTGGGACCAAAAGGCACAGTTAAAATGTGAGTAC-CTTAACTTAAATCT----GAGTTTAGAGCACGGCTCCTGCG------------------------------CGTGCATA-AG-GATTTGA------GGGTTAAAATA-ATCGCAGCGTTAT------TA-TTAACAAACATT-TTGCGACAGCTGCG-----CTGCCGCAGCCGCTGCCCAATTGAGGTTAAAACCGTC------------GAATAGCGGCATGCGTCATCGAGC--------GACTGAGATG-----GC---AATAGCGC--A---TGTAG
droMoj3 scaffold_6473:15138883-15139139 - CTGCAGGATGTGATGCGAACCAATTTGGGACCGAAAGGCACAGTTAAAATGTGAGTAC-ATTAATTAAAATAT----GCATTTAAAGCATGACTTTAGTG------------------------------CATGCATA-GGGCATTAAA------A--TCTTACT------CAAAGTAAGCATTGTAA-TTAACAAACTTT-TTCGGACATCTGTG-----CG------GCCGCTACTCGAGTGAGGTTAAAATCGGTCTTGTTGCTTTTGCATAGCGGCATGCGTCATCGAGCG--A------CTGAGACA-----GC---AATATCGT--A---TTTAG
droGri2 scaffold_14853:7065065-7065323 - TTGCAGGATGTAATGCGCACCAATTTGGGGCCAAAGGGAACAGTCAAAATGTGAGTAA-CTTCAATTAAATGT----TAGTTTATAGCACGTTGCCCGCACAT------------------------------CCG-CAAG-------GATTGCAG--CCCAGG-C-----GCACTCACCATCGCGAGATTAACAAACAT-TTAGCGACAGCTGCG-----CT------GTCGCCGCACAAGTGAGGTTAAATCCGTTCCGGCTG-TAGTGAAGAGCGGCATGCGTCATCGCGAG--A------CTGAGATA-----GCAATAATATCGC--A---TTTAG
droWil2 scf2_1100000004909:9569851-9570077 + TTGCAGGATGTAATGCGTACGAATTTGGGTCCCAAAGGCACGGTTAAAATGTAAGTGCAAATAGAATAATTGT--------TTATTTACTACCAA-CAAATAGCTACGACAGAGAATATGGGCTATATAC---C-ATT-TACAATT-AA------A--TA---------------------------A-GAAATAT-CAATTTAATGACAGCTGCCGTCTACTGCGGCGGCATATGTC-AATTGAGGTTAGAAACGACAA---------CAAACAGCGGCATGCGTCAT----------------------------------------------------
dp5 XL_group1e:325704-325943 - CTGCAGGATGTGATGCGCACCAACCTGGGTCCCAAGGGAACAGTAAAAATGTAAGTAA-CTG----------CCTTTATTACTGTGAC--------ATCCTAG------------------------------CCA-C-------CAGAGTTTAAA--TTCATT-AGC---GACAGAACACAGTCG-A-AAAACATGCAT-TCAGAAACAGATGCCGT-----------GCCCCGTGATGTTTAAGGTTAGAAACGAACT---------GCAATAGCGGCATGCGTCATCGTGCC--A----G-CTGAC--GGTACTG-T--AGAACCGCAGA---ACTAG
droPer2 scaffold_30:898055-898294 + CTGCAGGATGTGATGCGCACCAACCTGGGTCCCAAGGGAACAGTAAAAATGTAAGTAA-CTG----------CCTTTATTACTGTGAC--------ATCCTAG------------------------------CCA-C-------CAGAGTTTAAA--TTCATT-AGC---GACAGAACACAGTCG-A-AAAACATGCAT-TCAGAAACAGATGCCGT-----------GCCCCGTGATGTTTAAGGTTAGAAACGAACT---------GCAATAGCGGCATGCGTCATCGTGCC--A----G-CTGAC--GGTACTG-T--AGAACCACAGA---ACTAG
droAna3 scaffold_13335:459804-460029 + CTCCAGGATGTGATGCGCACCAATCTGGGTCCCAAGGGCACAGTGAAGATGTAAGTAG-CTCCAAATCC---CTA------CTATTACTTCCATTT--------------------------CCACCGTG---T-GGA-TGCACTTTCA------C--TCAAAAG------TCGGTGGAAAATGGGTA-AAAACATGCCTTTTGACGACAGCTGCG-------------GCAACTGCCAGTTTGAGGTTAGGAACGAAG--------------TAGCGGCATGCGTCATCGTTGGGGG----GAAAGAGATG----------------------------G
droBip1 scf7180000396794:61773-61998 + CTCCAGGATGTGATGCGCACCAATCTGGGTCCCAAGGGCACAGTCAAGATGTAAGTGG-CTGCAAATCC---TTA------CTATTACTTCCATTT--------------------------CCACCATG---T-GGG-TATAGTTTCA------C--TCAAAAT------TTGGCGTAAAACGGGTA-AAAACATGCAATTTGGCGACAGCTGCG-------------GCAACGGCCAGTTTGAGGTTAGAGGCGAAG--------------TAGCGGCATGCGTCATCGTTGGGGG----GAAAGAGATG----------------------------G
droKik1 scf7180000302414:824593-824836 + CTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGAACCGTCAAGATGTGAGTAA-AACAGCATAAATAT----ATAACTATTACCAGCCCCG--------------------------TTCCAATG---T-GAC-AGGAGTTTTA------G--TTAAAAT------TCAAGAAAATACAGCCC-AAGACAAGCGTTTTCCTAGCAGCTGCG-------------TCTGCCGAAAGTTTGAGGTTAGACTTGAACT-------------TGGCGGCATGCGTCATCGTAGGCCA----GAAAGAGATA-----GC---AGCATC--------TGAAA
droFic1 scf7180000454038:913071-913306 + CTGCAGGATGTGATGCGCACCAATTTGGGACCTAAGGGCACAGTGAAGATGTAAGTGA-ATAAAACATA---ACT------CTATTATCCCTTTTT--------------------------TAAAGTTG---G-GAG-GGCAGTTTAT------G--TGAAAAG------TTGAGTTGTTGTTGCCC-AAAACATGCATTTTGGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGAGTTGTCA--------------TAGCGGCATGCGTCATAGCAAG--A----GAAAGAGATG---------GAACGATTC--A---AG--T
droEle1 scf7180000490751:301702-301931 - TTGCAGGATGTGATGCGCACCAATTTGGGCCCCAAGGGCACAGTGAAGATGTAAGTAA-CCGGACATTG---CCT------CTAATATCCTTTGTT--------------------------TTAAGTTG---T-GAC-AGCAGTTTTA------G--TCAAAAC------TTGAGTTTATATGGCAC-AAAACATACATTTTGGCCACAGCTGCG-------------GCAACCGCAAGTTTGAGGTTAGAGCGAAAC--------------TAGCGGCATGCGTCATCGCAAG--A----AAGAGAGAGA---------GAGAG-------------AG
droRho1 scf7180000776762:51796-52036 + TTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACAGTTAAGATGTAAGTAA-CCAGTCCTTA---CAT------CTATTAATCTTAGGT--------------------------TTAAGTTG---T-GCC-AGCAGTTTAA------G--TCAAAAT------TTGAGTTAATATGCACC-AAAAAATACATTTTGGCCACAGCTGCG-------------GCGGCCGCAAGTTTGAGGTTAGAGTGGAAC--------------TAGCGGCATGCGTCATCGCAAG--A----GAAAGAGAGG---------CAATGATGC--GACTTGAAA
droBia1 scf7180000302421:2466024-2466231 + CTGCAGGATGTGATGCGCACCAACTTGGGACCCAAGGGCACCGTGAAGATGTAAGTGG-CTCAGCTCGG---GCT------CTATTGGCCCCCACC--------------------------TTAGGTTT---C-CCC-AGAAGTTTTA------G--TCAAAAT------TCTGGTTAACACGCACA-AAAACATGCATTTTGGCCACAGCTGCG-------------GCGACGGCCAGTGTGAGGTTAGGGCTGAAC--------------TAGCGGCATGCGTCATCG--------------------------------------------------
droTak1 scf7180000415909:27745-27979 - CTGCAGGATGTGATGCGCACCAACTTGGGACCCAAGGGCACAGTGAAGATGTAAGTGA-CTGAAGAGGG---CCT------CTATTGGTCTTTAAT--------------------------ATAGTTTG---C-GAG-CCCAGTTTTA------G--TCAAACT------TTTGGTTAATAGGCATA-AAAACATGCATTTTAACCACAGCTGCG-------------GCTATGGCAAGTTTGAGGTTAGGGCCGAGC--------------TGGCGGCATGCGTCATCGCAAG--GGAGGGAAAGAGAGG---------GAATGTT------------G
droEug1 scf7180000409533:820630-820853 + TTGCAGGATGTGATGCGTACCAATTTGGGTCCTAAGGGCACAGTTAAAATGTAAGTGA-CTAAGCATTA---CTT------TTATTAAGTCTCACT--------------------------TTACATTG---C-GAT-AGGAGTTTAA------G--TCAAAAG------TATAGCTAATATATATA-AAAACATAACTTTTGGCCACAGCTGCG-------------GCGACGGCAAGTTTGAGGTTGGAGTTGAAC--------------TAGCGGCATGCGTCATCGCAAG--G----GAAAGAGAGG---------G-------------------
dm3 chrX:15640891-15641121 + CTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACCGTTAAGATGTAAGTTA-CTAAAACCGG---CCT------CTAATATCCCTCACT--------------------------TTGCGTTC---C-ATT-AGCAATTTGA------G--TGAGAAT------GCTAGTTTATAGGCGAA-AAAACAAACGTTTTGGTCACAGCTGCG-------------GCAACTGCAAGTTTGAGGTTAGACTGGAAC--------------TAGCGGCATGCGTCATCGCAAA--A----GAAAGAAAGA---------GAATGTT------------G
droSim2 x:14818072-14818306 + dsi_20296 CTGCAGGATGTGATGCGCTCCAATTTGGGACCCAAGGGCACCGTCAAAATGTAAGTGA-CTGAAACCGG---CCT------CTAATATTCCTCACT--------------------------TTGCGTGT---C-ATT-AGCAATTTAA------G--TAAGAAT------GCAAGTATATAGGCGAA-AAAACAAGCGTTTTCGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGACTTGAAC--------------TAGCGGTATGCGTCATCGCAAA--A----GAAAGAGAGG---------GAATGTTGC--A------AG
droSec2 scaffold_37:225074-225311 + CTGCAGGATGTGATGCGCTCCAATTTGGGACCCAAGGGCACCGTCAAAATGTAAGTGA-CTGAAACGGG---CCT------CTAATATTCCTCACT--------------------------TTGCGTTT---C-ATT-AGCAATTTGA------G--TAAGAAT------GCAAGTATATAGGCGAA-AAAACAAGCGTTTTGGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGACTTGAAC--------------TAGCGGTATGCGTCATCGCAAA--A----GAAAGAGAGG---------GAATGTTGC--A---AGTCT
droYak3 X:9845937-9846144 + TTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACCGTGAAGATGTAAGTAA-CTGAAACCGT---ACT------CTAATATCCCTCACT--------------------------TTGCGTTG---C-AAT-AGCAGTTTGA------G--TCAGAAT------GCAAGTTAATTGACGTA-AAAACATAAGTTTTGGCCACAGCTGCG-------------GCGGCTGCATGTTTAAGGTTAGAGTTGAAC--------------TAGCGGCATGCGTCATCG--------------------------------------------------
droEre2 scaffold_4690:11396985-11397192 - TTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACAGTGAAGATGTAAGTAA-CTGAAACAAT---ACT------CTAATATCTCTCACT--------------------------TTGCAATG---C-TTT-AGCAGTTTGA------G--TCAGAAT------GCAAGTTAATAGACATA-AAAACATAGGTTTTGGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGAGTTGAAC--------------TAGCGGCATGCGTCATTG--------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTGCAGGATGTGATGCGCACCAATTTGGGACCAAAAGGCACAGTTAAAATGTGAGTAC-CTTAACTTAAATCT----GAGTTTAGAGCACGGCTCCTGCG------------------------------CGTGCATA-AG-GATTTGA------GGGTTAAAATA-ATCGCAGCGTTAT------TA-TTAACAAACATT-TTGCGACAGCTGCG-----CTGCCGCAGCCGCTGCCCAATTGAGGTTAAAACCGTC------------GAATAGCGGCATGCGTCATCGAGC--------GACTGAGATG-----GC---AATAGCGC--A---TGTAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................TCATCGAGC--------GACTGAGATG-----GC---...................2112.002000000002000000000000000000000000000000000000000000000000000000
................................................................................TTTAGAGCACGGCTCCTGCG------------------------------CTA................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
.TGCAGGATGTGATGCGCACC................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................ATTTGGGACCAAAAGGCACA...........................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.........GTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.......ATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........TGTGATGCGCACCAATTTGGGACCAAA..................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
........TGTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2411.001000000000010000000000000000000000000000000000000000000000000000
........TGTGATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
......GATGTGATGCGCACCAATTTGGG........................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
.TGCAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................ATTTGGGACCAAAAGGCACAGT.........................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
................GCACCAATTTGGGACCAAAAGGCACAG..........................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................AAATCT----GAGTTTAGAGCACGG.........................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TAGCGGCATGCGTCATCGAGC--------.......................................2111.001000000000000000000000000000000000000000000000000000000000000010
..GCAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CGTGCATA-AG-GATTTGA------GGGT......................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CCGTC------------GAATAGCGGCATGCG........................................................2011.001000000000000000000000000000000000000000000000000000000000000001
..GCAGGATGTGATGCGCACCAC..............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
droMoj3
CTGCAGGATGTGATGCGAACCAATTTGGGACCGAAAGGCACAGTTAAAATGTGAGTAC-ATTAATTAAAATAT----GCATTTAAAGCATGACTTTAGTG------------------------------CATGCATA-GGGCATTAAA------A--TCTTACT------CAAAGTAAGCATTGTAA-TTAACAAACTTT-TTCGGACATCTGTG-----CG------GCCGCTACTCGAGTGAGGTTAAAATCGGTCTTGTTGCTTTTGCATAGCGGCATGCGTCATCGAGCG--A------CTGAGACA-----GC---AATATCGT--A---TTTAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....GGATGTGATGCGAACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2511.001100000
..........TGATGCGAACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................2111.001100000
.........GTGATGCGAACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2111.001000001
CTGCAGGATGTGATGCGAACCAATTTG..........................................................................................................................................................................................................................................................................................................................2711.001000001
droGri2
TTGCAGGATGTAATGCGCACCAATTTGGGGCCAAAGGGAACAGTCAAAATGTGAGTAA-CTTCAATTAAATGT----TAGTTTATAGCACGTTGCCCGCACAT------------------------------CCG-CAAG-------GATTGCAG--CCCAGG-C-----GCACTCACCATCGCGAGATTAACAAACAT-TTAGCGACAGCTGCG-----CT------GTCGCCGCACAAGTGAGGTTAAATCCGTTCCGGCTG-TAGTGAAGAGCGGCATGCGTCATCGCGAG--A------CTGAGATA-----GCAATAATATCGC--A---TTTAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................ATTTGGGGCCAAAGGGAACAGTC........................................................................................................................................................................................................................................................................................................2311.00110
......................ATTTGGGGCCAAAGGGAACA...........................................................................................................................................................................................................................................................................................................2011.00101
droWil2
TTGCAGGATGTAATGCGTACGAATTTGGGTCCCAAAGGCACGGTTAAAATGTAAGTGCAAATAGAATAATTGT--------TTATTTACTACCAA-CAAATAGCTACGACAGAGAATATGGGCTATATAC---C-ATT-TACAATT-AA------A--TA---------------------------A-GAAATAT-CAATTTAATGACAGCTGCCGTCTACTGCGGCGGCATATGTC-AATTGAGGTTAGAAACGACAA---------CAAACAGCGGCATGCGTCAT----------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................GTACGAATTTGGGTCCCAAAG................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................TAGCTACGACAGAGAATATG.............................................................................................................................................................................................................................2011.00100010
.........GTAATGCGTACGAATTTGGGTCC.....................................................................................................................................................................................................................................................................................................................2311.00100100
.................TACGAATTTGGGTCCCAAAGG...............................................................................................................................................................................................................................................................................................................2111.00101000
.....................AATTTGGGTCCCAAAGGCAC............................................................................................................................................................................................................................................................................................................2011.00100010
...........................GGTCCCAAAGGCACGGTTAAAAT...................................................................................................................................................................................................................................................................................................2311.00100010
...............................................................................................................................................................................................................................................................GACAA---------CAAACAGCGGCATG..........................................................1911.00110000
........TGTAATGCGTACGAATTTGG.........................................................................................................................................................................................................................................................................................................................2011.00100100
............ATGCGTACGAATTTGGGTCCCA...................................................................................................................................................................................................................................................................................................................2211.00101000
................GTACGAATTTGGGTCCCAAAGGC..............................................................................................................................................................................................................................................................................................................2311.00100010
........TGTAATGCGTACGAATTTG..........................................................................................................................................................................................................................................................................................................................1911.00101000
..................ACGAATTTGGGTCCCAAAGGCACGGT.........................................................................................................................................................................................................................................................................................................2611.00101000
dp5
CTGCAGGATGTGATGCGCACCAACCTGGGTCCCAAGGGAACAGTAAAAATGTAAGTAA-CTG----------CCTTTATTACTGTGAC--------ATCCTAG------------------------------CCA-C-------CAGAGTTTAAA--TTCATT-AGC---GACAGAACACAGTCG-A-AAAACATGCAT-TCAGAAACAGATGCCGT-----------GCCCCGTGATGTTTAAGGTTAGAAACGAACT---------GCAATAGCGGCATGCGTCATCGTGCC--A----G-CTGAC--GGTACTG-T--AGAACCGCAGA---ACTAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................GCACCAACCTGGGTCCCAAGG................................................................................................................................................................................................................................................................................................................2113.0030300000000
..........TGATGCGCACCAACCTGGGTCCCAAGG................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................GCC--A----G-CTGAC--GGTACTG-T--AGAACC.............2411.0010000000001
.......ATGTGATGCGCACCAACCTG..........................................................................................................................................................................................................................................................................................................................2011.0010100000000
CTGCAGGATGTGATGCGCACCAACA............................................................................................................................................................................................................................................................................................................................2511.0010100000000
...........GATGCGCACCAACCTGGGTCCCAAG.................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............TGCGCACCAACCTGGGTCCCA...................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
CTGCAGGATGTGATGCGCACCAACCTGGGTCCCAAGGGAACAGTAAAAATGTAAGTAA-CTG----------CCTTTATTACTGTGAC--------ATCCTAG------------------------------CCA-C-------CAGAGTTTAAA--TTCATT-AGC---GACAGAACACAGTCG-A-AAAACATGCAT-TCAGAAACAGATGCCGT-----------GCCCCGTGATGTTTAAGGTTAGAAACGAACT---------GCAATAGCGGCATGCGTCATCGTGCC--A----G-CTGAC--GGTACTG-T--AGAACCACAGA---ACTAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............GCGCACCAACCTGGGTCCCAAGGGAACA...........................................................................................................................................................................................................................................................................................................2811.001010000
.................CACCAACCTGGGTCCCAAGGGAACA...........................................................................................................................................................................................................................................................................................................2511.001010000
................GCACCAACCTGGGTCCCAAGG................................................................................................................................................................................................................................................................................................................2111.001010000
.................CACCAACCTGGGTCCCAAGG................................................................................................................................................................................................................................................................................................................2011.001010000
droAna3
CTCCAGGATGTGATGCGCACCAATCTGGGTCCCAAGGGCACAGTGAAGATGTAAGTAG-CTCCAAATCC---CTA------CTATTACTTCCATTT--------------------------CCACCGTG---T-GGA-TGCACTTTCA------C--TCAAAAG------TCGGTGGAAAATGGGTA-AAAACATGCCTTTTGACGACAGCTGCG-------------GCAACTGCCAGTTTGAGGTTAGGAACGAAG--------------TAGCGGCATGCGTCATCGTTGGGGG----GAAAGAGATG----------------------------GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........GATGCGCACCAATCTGGGTCC.....................................................................................................................................................................................................................................................................................................................2111.001000010
...............................CCAAGGGCACAGTGAAGATGCT................................................................................................................................................................................................................................................................................................2211.001000010
......GATGTGATGCGCACCAATCTGGGTCCC....................................................................................................................................................................................................................................................................................................................2711.001000001
.........................................AGTGAAGATGTAAGTAG-C.........................................................................................................................................................................................................................................................................................1811.001000001
.................................................................................................................................................................................................................................................................AG--------------TAGCGGCATGCGTCATC...................................................1911.001010000
...........GATGCGCACCAATCTGGGTCCCAAGGGC..............................................................................................................................................................................................................................................................................................................2811.001000001
.....GGATGTGATGCGCACCAATCTGG.........................................................................................................................................................................................................................................................................................................................2311.001010000
........TGTGATGCGCACCAATCTGGGT.......................................................................................................................................................................................................................................................................................................................2211.001010000
................GCACCAATCTGGGTCCCAAG.................................................................................................................................................................................................................................................................................................................2011.001001000
........................CTGGGTCCCAAGGGCACAGTGAAGATGCT................................................................................................................................................................................................................................................................................................2911.001010000
droBip1
CTCCAGGATGTGATGCGCACCAATCTGGGTCCCAAGGGCACAGTCAAGATGTAAGTGG-CTGCAAATCC---TTA------CTATTACTTCCATTT--------------------------CCACCATG---T-GGG-TATAGTTTCA------C--TCAAAAT------TTGGCGTAAAACGGGTA-AAAACATGCAATTTGGCGACAGCTGCG-------------GCAACGGCCAGTTTGAGGTTAGAGGCGAAG--------------TAGCGGCATGCGTCATCGTTGGGGG----GAAAGAGATG----------------------------GSizeHit CountTotal NormTotal
No Reads
droKik1
CTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGAACCGTCAAGATGTGAGTAA-AACAGCATAAATAT----ATAACTATTACCAGCCCCG--------------------------TTCCAATG---T-GAC-AGGAGTTTTA------G--TTAAAAT------TCAAGAAAATACAGCCC-AAGACAAGCGTTTTCCTAGCAGCTGCG-------------TCTGCCGAAAGTTTGAGGTTAGACTTGAACT-------------TGGCGGCATGCGTCATCGTAGGCCA----GAAAGAGATA-----GC---AGCATC--------TGAAASizeHit CountTotal NormTotal
No Reads
droFic1
CTGCAGGATGTGATGCGCACCAATTTGGGACCTAAGGGCACAGTGAAGATGTAAGTGA-ATAAAACATA---ACT------CTATTATCCCTTTTT--------------------------TAAAGTTG---G-GAG-GGCAGTTTAT------G--TGAAAAG------TTGAGTTGTTGTTGCCC-AAAACATGCATTTTGGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGAGTTGTCA--------------TAGCGGCATGCGTCATAGCAAG--A----GAAAGAGATG---------GAACGATTC--A---AG--TSizeHit CountTotal NormTotal
No Reads
droEle1
TTGCAGGATGTGATGCGCACCAATTTGGGCCCCAAGGGCACAGTGAAGATGTAAGTAA-CCGGACATTG---CCT------CTAATATCCTTTGTT--------------------------TTAAGTTG---T-GAC-AGCAGTTTTA------G--TCAAAAC------TTGAGTTTATATGGCAC-AAAACATACATTTTGGCCACAGCTGCG-------------GCAACCGCAAGTTTGAGGTTAGAGCGAAAC--------------TAGCGGCATGCGTCATCGCAAG--A----AAGAGAGAGA---------GAGAG-------------AGSizeHit CountTotal NormTotal
No Reads
droRho1
TTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACAGTTAAGATGTAAGTAA-CCAGTCCTTA---CAT------CTATTAATCTTAGGT--------------------------TTAAGTTG---T-GCC-AGCAGTTTAA------G--TCAAAAT------TTGAGTTAATATGCACC-AAAAAATACATTTTGGCCACAGCTGCG-------------GCGGCCGCAAGTTTGAGGTTAGAGTGGAAC--------------TAGCGGCATGCGTCATCGCAAG--A----GAAAGAGAGG---------CAATGATGC--GACTTGAAASizeHit CountTotal NormTotal
No Reads
droBia1
CTGCAGGATGTGATGCGCACCAACTTGGGACCCAAGGGCACCGTGAAGATGTAAGTGG-CTCAGCTCGG---GCT------CTATTGGCCCCCACC--------------------------TTAGGTTT---C-CCC-AGAAGTTTTA------G--TCAAAAT------TCTGGTTAACACGCACA-AAAACATGCATTTTGGCCACAGCTGCG-------------GCGACGGCCAGTGTGAGGTTAGGGCTGAAC--------------TAGCGGCATGCGTCATCG--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTGCAGGATGTGATGCGCACCAACTTGGGACCCAAGGGCACAGTGAAGATGTAAGTGA-CTGAAGAGGG---CCT------CTATTGGTCTTTAAT--------------------------ATAGTTTG---C-GAG-CCCAGTTTTA------G--TCAAACT------TTTGGTTAATAGGCATA-AAAACATGCATTTTAACCACAGCTGCG-------------GCTATGGCAAGTTTGAGGTTAGGGCCGAGC--------------TGGCGGCATGCGTCATCGCAAG--GGAGGGAAAGAGAGG---------GAATGTT------------GSizeHit CountTotal NormTotal
No Reads
droEug1
TTGCAGGATGTGATGCGTACCAATTTGGGTCCTAAGGGCACAGTTAAAATGTAAGTGA-CTAAGCATTA---CTT------TTATTAAGTCTCACT--------------------------TTACATTG---C-GAT-AGGAGTTTAA------G--TCAAAAG------TATAGCTAATATATATA-AAAACATAACTTTTGGCCACAGCTGCG-------------GCGACGGCAAGTTTGAGGTTGGAGTTGAAC--------------TAGCGGCATGCGTCATCGCAAG--G----GAAAGAGAGG---------G-------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACCGTTAAGATGTAAGTTA-CTAAAACCGG---CCT------CTAATATCCCTCACT--------------------------TTGCGTTC---C-ATT-AGCAATTTGA------G--TGAGAAT------GCTAGTTTATAGGCGAA-AAAACAAACGTTTTGGTCACAGCTGCG-------------GCAACTGCAAGTTTGAGGTTAGACTGGAAC--------------TAGCGGCATGCGTCATCGCAAA--A----GAAAGAAAGA---------GAATGTT------------GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............TGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................261170.00170000000000000000000000002000000000000101100011000000111000000000000000000000002110000000000000000000000000000000000000000000000000000000401010000001100140500000000000000000000000000000000020010030002000000001011150008021102030300010000000010000000000000000000000000000000000000000000000000000101010180000720500000010000002131152110010
.....................AATTTGGGACCCAAGGGCACCGTT........................................................................................................................................................................................................................................................................................................24122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000009604000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................28119.00190000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000010000100000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000211700000
..........TGATGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................29116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000602600000
..........TGATGCGCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000110200000
.........................TGGGACCCAAGGGCACCGTTAAGATGT.................................................................................................................................................................................................................................................................................................27110.00100000000000000000000000000000000000000010000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000100010000100000000000000000100000000
........TGTGATGCGCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................29110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTGATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAGGATGTGATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000110100000
.TGCAGGATGTGATGCGCACC................................................................................................................................................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......GATGTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.......................TTTGGGACCCAAGGGCACCGTTAAGATG..................................................................................................................................................................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000
CTGCAGGATGTGATGCGCA..................................................................................................................................................................................................................................................................................................................................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTGATGCGCACCAATTTGGGACCCAA..................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000002011100000
..........TGATGCGCACCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001010200000
.............TGCGCACCAATTTGGGACCCAAGGGCA.............................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAATTTGGGACCCAAGGGCACCGTT........................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........GATGCGCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000101001000
........TGTGATGCGCACCAATTTGGGACCCAAG.................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000110000
.........................TGGGACCCAAGGGCACCGTTAAGATG..................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000011000
........................TTGGGACCCAAGGGCACCGTTAAGATGT.................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000
........TGTGATGCGCACCAATTTGGGACCCA...................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100100000
..................ACCAATTTGGGACCCAAGGGCACCGTT........................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCAGGATGTGATGCGCACCAATT............................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..GCAGGATGTGATGCGCACCAAT.............................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................CACCAATTTGGGACCCAAGGGCACCG..........................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.TGCAGGATGTGATGCGCAC.................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000
..GCAGGATGTGATGCGCACCAATT............................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCGCACCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...................CCAATTTGGGACCCAAGGGCACCGTT........................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................AATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGCAGGATGTGATGCGCACCAATT............................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........TGTGATGCGCACCAATTTGGGACCC....................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTGGGACCCAAGGGCACCGTTAAGA....................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGCAGGATGTGATGCGCACCA...............................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCAATTTGGGACCCAAGGGCACCGT.........................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000
CTGCAGGATGTGATGCGCACCAAT.............................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................GCAAA--A----GAAAGAAAGA---------G...................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AGACTGGAAC--------------TAGCGGCATG..........................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..........TGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCAGGATGTGATGCGCACCA...............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
.....................AATTTGGGACCCAAGGGCAC............................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................CAATTTGGGACCCAAGGGCACCGT.........................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGGATGTGATGCGCACCAA..............................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CT------CTAATATCCCTCACT--------------------------TTGC.......................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....AGGATGTGATGCGCACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000
................................CAAGGGCACCGTTAAGATGTT................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000
.................CACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGATGCGCACCAATTTGGGACCCAAG.................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCACCAATTTGGGACCCAAGGGCAC............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CACCAATTTGGGACCCAAGGGCACCGT.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAGGATGTGATGCGCACC................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........TGATGCGCACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................CAACTGCAAGTTTGAGGTTAGA.........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAGGATGTGATGCGCACCAATTTGGG........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.TGCAGGATGTGATGCGCACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TATCCCTCACT--------------------------TTGCGTTC---C-A.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCAATTTGA------G--TGAGAAT------G.........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................TTGGGACCCAAGGGCACC...........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACCCAAGGGCACCGTTAAGA....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......GATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................................................ATAGGCGAA-AAAACAAACGTT............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAT------GCTAGTTTATAGGCG...........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AAC--------------TAGCGGCATGCGTCATCG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........GATGCGCACCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..GCAGGATGTGATGCGCACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGGGACCCAAGGGCACCGTT........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CGCAAA--A----GAAAGAAAGA---------GAA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GGCGAA-AAAACAAACGTT............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..................ACCAATTTGGGACCCAAGGGCACCGT.........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............GCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACCCAAGGGCACCGTTAAGATGTT................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCGCACCAATTTGGGACCCAAGGGCACC...........................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.TGCAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................TGGAAC--------------TAGCGGCATGCGTCATCG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................................AGTTTGAGGTTAGACTGGAAC--------------T...................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCAATTTGA------G--TGAGAAT------GC........................................................................................................................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AAAACCGG---CCT------CTAATATCCCTCACT--------------------------T..........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAGGATGTGATGCGCACCAATTTGGG........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................AGGCGAA-AAAACAAACGT.............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.TGCAGGATGTGATGCGCACCAAT.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AAACAAACGTTTTGGTCACA...................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GATGTGATGCGCACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...............................................................................................................................................................................................................................................GTTTGAGGTTAGACTGGAA...................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACCAATTTGGGACCCAAGGGCACCG..........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCGCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................TTTGGGACCCAAGGGCACCGTTAAGATGT.................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............GCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......ATGTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............CGCACCAATTTGGGACCCA...................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCGCACCAATTTGGGACCCAAGGGCG.............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGCAGGATGTGATGCGCAC.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GACCCAAGGGCACCGTTAAGAT...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTGGGACCCAAGGGCACC...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGGGACCCAAGGGCACCGTTAAGATT..................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................TTTGGTCACAGCTGCG-------------GCAAC...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGATGCGCACCAATTTGGGACCC....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AATTTGGGACCCAAGGGCA.............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTGGGACCCAAGGGCACCGTTAAGA....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................ACTGCAAGTTTGAGGTTAGAC........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................GACCCAAGGGCACCGTTAAGATGTTG...............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............GCGCACCAATTTGGGACCC....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTGGGACCCAAGGGCACCGTT........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACTGGAAC--------------TAGCGGCATGCG........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGTTA-CTAAAACCGG---CCT------CTA.................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CACCAATTTGGGACCCAAGGGCAC............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGCAGGATGTGATGCGCACC................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTGGGACCCAAGGGCACCGTTAAGAT...................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCGCACCAATTTGGGACCCAAGGGA..............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GACTGGAAC--------------TAGCGGCATGCG........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........GTGATGCGCACCAATTTGGGACCCAAC.................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCAAGGGCACCGTTAAGATGTT................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........TGTGATGCGCACCAATTTGGGAC......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
CTGCAGGATGTGATGCGCACCC...............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................CACCGTTAAGATGTAAGTTA-C.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GATGTGATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................ACCCAAGGGCACCGTTAAGATGTAAG..............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................TGAGGTTAGACTGGAAC--------------TAGC................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................................................................................................................AGACTGGAAC--------------TAGCGGCATGCGTCA.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCACCAATTTGGGACCCAAGGGCACCGT.........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................ACCCAAGGGCACCGTTAAGATGTTG...............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTGGGACCCAAGGGCACCGTTAAG.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droSim2
CTGCAGGATGTGATGCGCTCCAATTTGGGACCCAAGGGCACCGTCAAAATGTAAGTGA-CTGAAACCGG---CCT------CTAATATTCCTCACT--------------------------TTGCGTGT---C-ATT-AGCAATTTAA------G--TAAGAAT------GCAAGTATATAGGCGAA-AAAACAAGCGTTTTCGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGACTTGAAC--------------TAGCGGTATGCGTCATCGCAAA--A----GAAAGAGAGG---------GAATGTTGC--A------AGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................TGTAAGTGA-CTGAAACCGG---CT...........................................................................................................................................................................................................................................................................2112.00200000000000002000
..........TGATGCGCTCCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................2811.00100000001000000000
....AGGATGTGATGCGCT..................................................................................................................................................................................................................................................................................................................................1521.00200000020000000000
........TGTGATGCGCTCCAATTTGGGACCCAA..................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
..................TCCAATTTGGGACCCAAGGGCACCGTC........................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.............TGCGCTCCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
.......ATGTGATGCGCTCCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
........TGTGATGCGCTCCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................3011.00100000001000000000
.............TGCGCTCCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2611.00100000000001000000
CTGCAGGATGTGATGCGCTC.................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..............GCGCTCCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
droSec2
CTGCAGGATGTGATGCGCTCCAATTTGGGACCCAAGGGCACCGTCAAAATGTAAGTGA-CTGAAACGGG---CCT------CTAATATTCCTCACT--------------------------TTGCGTTT---C-ATT-AGCAATTTGA------G--TAAGAAT------GCAAGTATATAGGCGAA-AAAACAAGCGTTTTGGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGACTTGAAC--------------TAGCGGTATGCGTCATCGCAAA--A----GAAAGAGAGG---------GAATGTTGC--A---AGTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................AATTTGGGACCCAAGGGCACC...........................................................................................................................................................................................................................................................................................................2112.0020020
...........GATGCGCTCCAATTTGGGACCCA...................................................................................................................................................................................................................................................................................................................2311.0010010
.TGCAGGATGTGATGCGCTCC................................................................................................................................................................................................................................................................................................................................2011.0010100
droYak3
TTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACCGTGAAGATGTAAGTAA-CTGAAACCGT---ACT------CTAATATCCCTCACT--------------------------TTGCGTTG---C-AAT-AGCAGTTTGA------G--TCAGAAT------GCAAGTTAATTGACGTA-AAAACATAAGTTTTGGCCACAGCTGCG-------------GCGGCTGCATGTTTAAGGTTAGAGTTGAAC--------------TAGCGGCATGCGTCATCG--------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................CTAATATCCCTCACT--------------------------TTGCGTTG---C-A.............................................................................................................................................................................................................2511.00100000010000
.........GTGATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............GCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2511.00100100000000
................GCACCAATTTGGGACCCAAG.................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........GTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............................................................................................................................................................CAGAAT------GCAAGTTAATTGA.............................................................................................................................................................1911.00100000010000
............ATGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2711.00100010000000
.....................................................................................................................................................................................................................................................GGTTAGAGTTGAAC--------------TAGCGGCATGCGTC......................................................2811.00100100000000
droEre2
TTGCAGGATGTGATGCGCACCAATTTGGGACCCAAGGGCACAGTGAAGATGTAAGTAA-CTGAAACAAT---ACT------CTAATATCTCTCACT--------------------------TTGCAATG---C-TTT-AGCAGTTTGA------G--TCAGAAT------GCAAGTTAATAGACATA-AAAACATAGGTTTTGGCCACAGCTGCG-------------GCGACTGCAAGTTTGAGGTTAGAGTTGAAC--------------TAGCGGCATGCGTCATTG--------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........GATGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................28130.003000000030
.........................TGGGACCCAAGGGCACAGTGAAGATG..................................................................................................................................................................................................................................................................................................26118.001840000014
.............TGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................26118.001811000007
...........GATGCGCACCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................27111.001100000011
.............TGCGCACCAATTTGGGACCCAAGGGCA.............................................................................................................................................................................................................................................................................................................2719.0099000000
..........TGATGCGCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................2719.0090000009
..........TGATGCGCACCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................2818.0080000008
.TGCAGGATGTGATGCGCACCAATT............................................................................................................................................................................................................................................................................................................................2416.0064000200
.TGCAGGATGTGATGCGCACC................................................................................................................................................................................................................................................................................................................................2013.0033000000
.TGCAGGATGTGATGCGCACCA...............................................................................................................................................................................................................................................................................................................................2113.0033000000
..........TGATGCGCACCAATTTGGGACCCAAG.................................................................................................................................................................................................................................................................................................................2613.0033000000
..........TGATGCGCACCAATTTGGGACCCAAGGGT..............................................................................................................................................................................................................................................................................................................2913.0030000003
........TGTGATGCGCACCAATTTGGGACCCA...................................................................................................................................................................................................................................................................................................................2612.0022000000
................GCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2312.0020101000
.TGCAGGATGTGATGCGCACCAATTTGGG........................................................................................................................................................................................................................................................................................................................2812.0022000000
...............CGCACCAATTTGGGACCCAAGGGCACAG..........................................................................................................................................................................................................................................................................................................2812.0022000000
.............TGCGCACCAATTTGGGACCCAAGG................................................................................................................................................................................................................................................................................................................2412.0022000000
...........GATGCGCACCAATTTGGGACCCAAG.................................................................................................................................................................................................................................................................................................................2512.0022000000
......GATGTGATGCGCACCAATTTGGGACCC....................................................................................................................................................................................................................................................................................................................2712.0022000000
.....................AATTTGGGACCCAAGGGCACAGTGAAGAT...................................................................................................................................................................................................................................................................................................2912.0020000002
.........................TGGGACCCAAGGGCACAGTGAAGA....................................................................................................................................................................................................................................................................................................2412.0022000000
.............TGCGCACCAATTTGGGACCCAAGGGCAC............................................................................................................................................................................................................................................................................................................2812.0022000000
........................TTGGGACCCAAGGGCACAGTGAAGAT...................................................................................................................................................................................................................................................................................................2612.0020000002
......GATGTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2611.0011000000
..............GCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2511.0011000000
.TGCAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2711.0011000000
...CAGGATGTGATGCGCACCAATTTGGG........................................................................................................................................................................................................................................................................................................................2611.0011000000
.................CACCAATTTGGGACCCAAGGGCACAG..........................................................................................................................................................................................................................................................................................................2611.0011000000
..........................GGGACCCAAGGGCACAGTGAAGATG..................................................................................................................................................................................................................................................................................................2511.0011000000
.............TGCGCACCAATTTGGGACCCAAGGG...............................................................................................................................................................................................................................................................................................................2511.0011000000
.............TGCGCACCAATTTGGGACCCAAGGGCACA...........................................................................................................................................................................................................................................................................................................2911.0011000000
.........................TGGGACCCAAGGGCACAGTGAAG.....................................................................................................................................................................................................................................................................................................2311.0011000000
..........TGATGCGCACCAATTTGGGACCCAAGGGC..............................................................................................................................................................................................................................................................................................................2911.0011000000
.........GTGATGCGCACCAATTTGGGA.......................................................................................................................................................................................................................................................................................................................2111.0011000000
TTGCAGGATGTGATGCGCACC................................................................................................................................................................................................................................................................................................................................2111.0010000100
.................CACCAATTTGGGACCCAAGGGCAC............................................................................................................................................................................................................................................................................................................2411.0011000000
........................TTGGGACCCAAGGGCACAGTGAAGA....................................................................................................................................................................................................................................................................................................2511.0011000000
..GCAGGATGTGATGCGCACCA...............................................................................................................................................................................................................................................................................................................................2011.0011000000
.....................AATTTGGGACCCAAGGGCACA...........................................................................................................................................................................................................................................................................................................2111.0010100000
.....................AATTTGGGACCCAAGGGCACAGTGAAGA....................................................................................................................................................................................................................................................................................................2811.0011000000
.......................TTTGGGACCCAAGGGCACAGTGAAG.....................................................................................................................................................................................................................................................................................................2511.0011000000
............................GACCCAAGGGCACAGTGAAGATGTT................................................................................................................................................................................................................................................................................................2511.0010000100
........TGTGATGCGCACCAATTTGGGACC.....................................................................................................................................................................................................................................................................................................................2411.0011000000
...CAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2511.0010000100
.......................TTTGGGACCCAAGGGCACAGTG........................................................................................................................................................................................................................................................................................................2211.0011000000
...................CCAATTTGGGACCCAAGGGCACAG..........................................................................................................................................................................................................................................................................................................2411.0011000000
.......ATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2111.0010001000
...............CGCACCAATTTGGGACCCAAGGGCAC............................................................................................................................................................................................................................................................................................................2611.0010100000
........................TTGGGACCCAAGGGCACAGTGAAGATG..................................................................................................................................................................................................................................................................................................2711.0010000001
........................TTGGGACCCAAGGGCACAGTGAAG.....................................................................................................................................................................................................................................................................................................2411.0010000100
..........TGATGCGCACCAATTTGGGACCCA...................................................................................................................................................................................................................................................................................................................2411.0011000000
.TGCAGGATGTGATGCGCACCAAT.............................................................................................................................................................................................................................................................................................................................2311.0010000100
...............CGCACCAATTTGGGACCCAAGGGCACAGT.........................................................................................................................................................................................................................................................................................................2911.0011000000
..GCAGGATGTGATGCGCACCAATT............................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................CCCAAGGGCACAGTGAAGATG..................................................................................................................................................................................................................................................................................................2111.0011000000
........TGTGATGCGCACCAATTTGGGACCC....................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................TTTGGGACCCAAGGGCACAGTGAAGA....................................................................................................................................................................................................................................................................................................2611.0011000000
..............GCGCACCAATTTGGGACCCAAGGGCA.............................................................................................................................................................................................................................................................................................................2611.0011000000
.TGCAGGATGTGATGCGCAC.................................................................................................................................................................................................................................................................................................................................1911.0011000000
....................CAATTTGGGACCCAAGGGCACAGT.........................................................................................................................................................................................................................................................................................................2411.0011000000
..GCAGGATGTGATGCGCACCAATTTGG.........................................................................................................................................................................................................................................................................................................................2611.0011000000
................GCACCAATTTGGGACCCAAGGGCACAG..........................................................................................................................................................................................................................................................................................................2711.0011000000

Generated: 05/17/2015 at 04:39 AM