ID:

dvi_9377

 Coordinate:

scaffold_12932:512649-512894 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.0 -27.7 -27.7

Flybase annnotation

exon [dvir_GLEANR_15051:1]; CDS [Dvir\GJ14820-cds]; exon [dvir_GLEANR_15051:2]; CDS [Dvir\GJ14820-cds]; intron [Dvir\GJ14820-in]

Repeatable elements

NameClassFamilyStrand
T-richLow_complexityLow_complexity+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAGCATTGAACGCGCGTGGTAGCCATTCACCGTTTGACGCTCCTGCTCGGTTAGTAGCCTCATCATATACATTTTTTTTTGTTTTTTTTTGTTTTTTGTTTGATATTATTTTATTTTGCGTCGTTTCGTGTTTTCTGTTTTGTGTTGGCGATTTGTATGTTATTGTGTTTCATGTGGCATCTAAACAAAACCAAAACCAAAACCAATTTGCATTTAACATTAACATTTAACTGAACTTGAACAGCGCGTAATTAATTCTTTGATTTCCTATTCTGTTAACACACACTTCTTGCAGCTGCATGTCCAACAAAGCCCAAACCATGAATGTCTTGCGCTTGAACAATA
**************************************************((((((((...........(((........)))...................((((......)))).(((((.(((.((.((((...(((..(((((((....(((.((((.((((.((((....(((.............)))......))))))))..)))).)))..)))))))..))).)))).))))).))))).((((((....)))))).......))))))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 M047
female body
 M027
male body		 V116
male body		 SRR060672
9x160_females_carcasses_total
 V053
head
 SRR060681
Argx9_testes_total
 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 SRR060656
9x160_ovaries_total
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
 M061
embryo
 SRR060688
160_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060677
Argx9_ovaries_total
 V047
embryo
 SRR060658
140_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060671
9x160_males_carcasses_total
 SRR060654
160x9_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060675
140x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060689
160x9_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR1106717
embryo_6-8h
.................................TTTGACGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 0 1 338.00 338 117 22 37 5 12 8 13 4 0 11 11 7 0 7 2 6 6 0 4 2 1 4 4 3 6 5 2 4 5 2 3 4 4 2 3 3 3 3 0 0 0 1 1 1
.................................TTTGACGCTCCTGCTCGGTTAGT.................................................................................................................................................................................................................................................................................................. 23 0 1 58.00 58 11 3 2 2 1 4 2 0 0 3 1 2 0 1 0 1 1 1 2 2 1 3 1 0 0 2 0 1 1 3 1 0 0 1 1 0 0 0 3 0 1 0 0 0
.................................TTTGACGCTCCTGCTCGGTTA.................................................................................................................................................................................................................................................................................................... 21 0 1 22.00 22 1 0 0 3 1 1 4 0 0 0 0 0 0 1 1 0 0 0 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTT..................................................................................................................................................................................................................................................................................................... 20 0 1 18.00 18 11 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CCATGAATGTCTTGCGCTT........ 19 0 1 7.00 7 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................AAACCATGAATGTCTTGCGCTT........ 22 0 1 5.00 5 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................GTTTGACGCTCCTGCTCGCTG..................................................................................................................................................................................................................................................................................................... 21 2 1 5.00 5 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGA.................................................................................................................................................................................................................................................................................................. 23 1 1 5.00 5 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................TTTGACGCTCCTGCTCGGTTAAA.................................................................................................................................................................................................................................................................................................. 23 2 1 5.00 5 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CACCGTTTGACGCTCCTGCTCGCTG..................................................................................................................................................................................................................................................................................................... 25 2 1 5.00 5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................CCAAACCATGAATGTCTTGCGCTT........ 24 0 1 4.00 4 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CATTCACCGTTTGACGCTCC.............................................................................................................................................................................................................................................................................................................. 20 0 1 3.00 3 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGCATTGAACGCGCGTGGTAGC.................................................................................................................................................................................................................................................................................................................................. 22 0 1 3.00 3 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAA................................................................................................................................................................................................................................................................................................... 22 1 1 3.00 3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................ATGAATGTCTTGCGCTTGAAC.... 21 0 1 3.00 3 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GGTAGCCATTCACCGTTTGACGCTC............................................................................................................................................................................................................................................................................................................... 25 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................AAACCATGAATGTCTTGCGCTTG....... 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTGG................................................................................................................................................................................................................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CAAACCATGAATGTCTTGCGCTT........ 23 0 1 3.00 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTGACGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTCG................................................................................................................................................................................................................................................................................................... 22 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GTCCAACAAAGCCCAAACCATGAAT................... 25 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAT................................................................................................................................................................................................................................................................................................... 22 1 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....ATTGAACGCGCGTGGTAGCCATTCACC.......................................................................................................................................................................................................................................................................................................................... 27 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGC.................................................................................................................................................................................................................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GTCCAACAAAGCCCAAACCATGA..................... 23 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GCCCAAACCATGAATGTCTTG............. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAAGCATTGAACGCGCGTGGTAGC.................................................................................................................................................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........CGCGCGTGGTAGCCATTCACC.......................................................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AGTTTGACGCTCCTGCTCGC....................................................................................................................................................................................................................................................................................................... 20 2 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATTGAACGCGCGTGGTAGCC................................................................................................................................................................................................................................................................................................................................. 20 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................AGCCCAAACCATGAATGTCTTGCGCTT........ 27 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........GAACGCGCGTGGTAGCCATT.............................................................................................................................................................................................................................................................................................................................. 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................AACCATGAATGTCTTGCGCTT........ 21 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGG.................................................................................................................................................................................................................................................................................................. 23 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTT.................................................................................................................................................................................................................................................................................................... 21 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................CATTCACCGTTTGACGCTCCTGCTCGCT...................................................................................................................................................................................................................................................................................................... 28 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GCCCAAACCATGAATGTCTTGCGCTT........ 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................TTTGACGCTCCCGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CAAACCATGAATGTCTTGCGCT......... 22 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CTTGACGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GCCCAAACCATGAATGTCTTGC............ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCAAACCATG...................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGAACGCGCGTGGCAGCC................................................................................................................................................................................................................................................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................TGCATGTCCAACAAAGCCCAAAC.......................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCCATTCACCGTTTGACGCT................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATTGAACGCGCGTGGTAG................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCAAACCATGAAT................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CATTCACCGTTTGACGCTCCTGCTC......................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGATCGGTTAG................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTTTGACGCTCCTGCTCG........................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGATCCTGCTCGGTTGG................................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GCCCAAACCATGAATGTCTTGCGCC......... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CAAAGCCCAAACCATGAATGT................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................CATGAATGTCTTGCGCTTG....... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTTCTCGGTTAGT.................................................................................................................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAAAAA................................................................................................................................................................................................................................................................................................ 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CACCGTTTGACGCTCCTGCTC......................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGTCCAACAAAGCCCAAACCATGAAT................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GAACGCGCGTGGTAGCCA................................................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CGTTTGACGCTCCTGCTCG........................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TGACGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TGACGCTCCTGCTCGGTTAGT.................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CACCGTTTGACGCACCTGCTCGCTG..................................................................................................................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTC.................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CATTTACCGTTTGACGCTC............................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TATCCAACAAAGCCCAAACCATGAAT................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ACCGTTTGACGCTCCTGCT.......................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTTTGACGCTCCTGCTCGC....................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CTTGCCGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTTTGACGCTCCTGCTCGCT...................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................AGCCCAAACCATGAATGTCTT.............. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGTCCAACAAAGCCCAAAC.......................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGTAAA............................................................................................................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGTT................................................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGCATTGAACGCGCGTGG...................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................ACGCTCCTGCTCGGTTAGTAG................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGATT..................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCAAACCATGAATGTCTT.............. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CCGTTTGACGCTCCTGCTCGCT...................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................CAACAAAGCCCAAACCATGA..................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................CAACAAAGCCCAAACCATG...................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTAGCCATTCACCCTTTGACGCTCGTGC........................................................................................................................................................................................................................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATGTCCAACAAAGCCCAAACCATGAAT................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................AATGTCTTGCGCTTGAACA... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CGCGCGTGGTAGCCATTCA............................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................AAACCATGAATGTCTTGCGCTTGA...... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGGCGCTCCTGCTCGGTTAGT.................................................................................................................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TACGCGTGGTAGCCATTCACCGTTT...................................................................................................................................................................................................................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGTCCAACAAAGCCCAAACCATGA..................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGGCGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCGCCTGCTCGGTTAGT.................................................................................................................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................CCCAAACCATGAATGTCTTGCGCTT........ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TAGCCATTCACCGTTTGACG.................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................AACAAAGCCCAAACCATGAATGTC................ 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ACCGTTTGACGCTCCTGCTCG........................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGAAA................................................................................................................................................................................................................................................................................................ 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTCTG................................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................TCCTATTCTGTTAACACACACT.......................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................ACCATGAATGTCTTGCGC.......... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CAAAGCCCAAACCATGAATGTCTTGC............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGCATTGAACGCGCGTGGTAGCC................................................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GAACGCGCGTGGTAGCCATTCACCGTTT...................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................GTAGCCATTCACCGTTTGACGCTC............................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCAAACCAT....................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TTCACCGTTTGACGCTCCTGCTCGG....................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTGACGCTCCTGCTCGCT...................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................TGCATGTCCAACAAAGCCCA............................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTTAGTC................................................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................ATGAATGTCTTGCGCTTGAACA... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCCGCTCGGTTA.................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ACCGTTTGACGCTCCTGCTCGG....................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AAGCATTGAACGCGCGTGGT..................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................CATTCACCGTTTGACGCTCCTGC........................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATTGAACGCGCGTGGTAGC.................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAAGCATTGAACGCGCGTGGTAGCC................................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ATTCACCGTTTGACGCTCCT............................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CAAACCATGAATGTCTTGC............ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TGTGACGATCCTGCTCGGTTAGC.................................................................................................................................................................................................................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCCATTCACCGTTTGAC................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................GCATGTCCAACAAAGCCCAAACCATG...................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATTGAACGCGCGTGGTAGCCATT.............................................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................AAGCCCAAACCATGAATGTC................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TGACGCTCCTGCTCGGTTAGTAG................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CACCGTTTGACGCCCCTGCTCGCTG..................................................................................................................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CAAACCATGAATGTCTTGCGCTTGA...... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................CATGAATGTCTTGCGCTTGAACA... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CATTCACCGTTTGACGCTC............................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTAACGCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................AAGCCCAAACCATGAATGTCTTGCGCT......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACACTCCTGCTCGGTTA.................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAAGCATTGGACGCGCGTGGTAGC.................................................................................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTGGTAGCCATTCACCGTTT...................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCCATTCACCGTTTGACG.................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTGAACGCGCGTGGTAGCC................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTAACGCGCGTGGTAGCCATT.............................................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCCATTCACCGTTTGACGCTC............................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TTCACCGTTTGACGCTCCTGCT.......................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................AAACCATGAATGTCTTGCGCTTGAACAA.. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................AGCACCATGAATGTCTTGCGCTT........ 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACTCTCCTGCTCGGTTAG................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGCATTGAACGCGCGTGGT..................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................GCGTAATGAATTCTTGGAT................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................ACAAAGGCCAAACCATGAA.................... 19 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGGTGAG................................................................................................................................................................................................................................................................................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CAAACCATGAAAGTCTGGC............ 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTTTGACGCTCCTGCTCGCTGC.................................................................................................................................................................................................................................................................................................... 22 3 4 0.50 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGAGGCTCCTGCTCGGGTCGT.................................................................................................................................................................................................................................................................................................. 23 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GTGTTGGTGATTTGTATATT........................................................................................................................................................................................ 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACGCTCCTGCTCGCTG..................................................................................................................................................................................................................................................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................CCCCAACCATGACCGTCTTG............. 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTGACACTGCTGCTCGGTTC.................................................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GTTCACGCTCCGGCTCGGTTA.................................................................................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................TTTTTTTGTTTATTTTTGTTTTTTGTG..................................................................................................................................................................................................................................................... 27 2 13 0.15 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AAATCAAAACCATAACCAAT.......................................................................................................................................... 20 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTTTTGTTTATTTTTGTTTTTTGTGT.................................................................................................................................................................................................................................................... 26 2 19 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGTGTTGGTGAGTTGTATATT........................................................................................................................................................................................ 21 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTCGTAACTTGCGCGCACCATCGGTAAGTGGCAAACTGCGAGGACGAGCCAATCATCGGAGTAGTATATGTAAAAAAAAACAAAAAAAAACAAAAAACAAACTATAATAAAATAAAACGCAGCAAAGCACAAAAGACAAAACACAACCGCTAAACATACAATAACACAAAGTACACCGTAGATTTGTTTTGGTTTTGGTTTTGGTTAAACGTAAATTGTAATTGTAAATTGACTTGAACTTGTCGCGCATTAATTAAGAAACTAAAGGATAAGACAATTGTGTGTGAAGAACGTCGACGTACAGGTTGTTTCGGGTTTGGTACTTACAGAACGCGAACTTGTTAT
**************************************************((((((((...........(((........)))...................((((......)))).(((((.(((.((.((((...(((..(((((((....(((.((((.((((.((((....(((.............)))......))))))))..)))).)))..)))))))..))).)))).))))).))))).((((((....)))))).......))))))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
......................................................................................................................................................................................................................................................................................................................TTCGGGTTTGGTACTTACAGAA.............. 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTGTTATTGGTTAAACGTA.................................................................................................................................... 21 2 4 0.25 1 0 0 1 0 0 0 0 0 0
.....................................................................TGTAAAAAAAAACAAAAAAAA................................................................................................................................................................................................................................................................ 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GAGAACGGGAACTTGTTA. 18 2 9 0.11 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................TCACCGTAGATTTGTTGGG.......................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 1 0 0 0 1
.................................................................................................................................................................................................TATTTGATTTGGTTAAACGTAA................................................................................................................................... 22 3 17 0.06 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................GCACAAAGGACAAAACACG........................................................................................................................................................................................................ 19 2 17 0.06 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................................................AACTAAGAAGCTAAAGGA............................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12932:512599-512944 + dvi_9377 GAAGCATT---G----AACGCGCGTGGTAGCCATTC-ACCGTTTGACGCTCCTGCTCGGTTAGTAGC--CTCATCATATACATTTTTTTTTGTTTT-------TTTTTGTTTTTTGTTTGATATTATTTTA---TTTTGCGTCGTTTCGTG-TTTTCTGTT-------TTGT-GTTGGCGATTTG------TATG-TTATTGTGTTTCAT---GTGGCATCTAAACAAAACCAAAACCAAAACCAATTTGCATTTAACATTAACATTTAACTGAACTTGAACAGCGCGTAATTAATTCTTTGATTTCCTATTCT-GT-TAACACACACTTC----TTGCAGCTGCATGTCCAACAAAGCCCA-AAC--CATGAATGTCTTGCGCTTGAACAATA
droMoj3 scaffold_6473:1028161-1028470 - GAAGCATT---G----AACGCGCGTGGTAGCCATTC-ACCGTTTAACGCTCCTGTTCGGTTAGTAGT--CCC--------------------CAAAAATTTATTCTTTGCTCGTTGTTTCGTCTTTTTTTT---TCTTTCTTTTTTACGTGGTTTTCGATT-------TTGT-TTTGTTTATTTT------CAAT-ATATT---TT---TGTAGTG----CCAACCGGAGGCAAAGCCG-AACGAGTTTGCATTTGACATTAAGCTG----TGAACTTTA---------------ATTTTTGATTTCCTTTTCCCGTTTATTCCGCCCTTTTTCTATATAGCAACATGTCCACCGCT------AGCAATGAGAAGGTCCTCTCCATGGGCAACA
droGri2 scaffold_14853:261695-261970 + GAAACATT---G----AACGCGCGTGGTAGCCATTC-ACCGTTCGACGCTCCTTCTCGGTTAGTAGAAACCC---------AC-TTCCCCTCCTTGCGTTCGTTCTTCGCTTGCTGTTTTGCAAAATTTAACATTCGTGCGT-GCTTTGCA-TTTCCTGTTAATAACAGTGTTTTTAGTGTTTGGCTAAACTACA-TT-TTGTTTTTCTT---GTTT------------------------------------------------------------------------------TTTTCTG--TTCTTTTTTT-G------------TTTTTGTTTACAGCTGTATGTCGACGAAAAGCCAAAACAACATGAAATTCGTTACGATAGACAACA
droWil2 scf2_1100000004963:1379013-1379076 + TTTTTGTTTTTT----TTTTTT-TTTGGTTTTGCACTTCCTTTTTTCGAT------------------------------------------------------------------------------------------------------------------------------------TCT------CGCTCCTGCT---T------------------------------------------------------------------------------------------------------------------------------TTGT----------------------------------------------------------G
dp5 XL_group1a:5986567-5986630 - GAAGCTTTTGGG-------------GGTAGACATTC-ACCGTTTGACGCCCG---TCGGTTAGTTGT--CCC------------------------------------TCTT---------------------------------------------------------------------------------------CT----------------------------------------------------------------------------------------------------------------------------------TGTT----------------------------------------------------------T
droPer2 scaffold_8952:716-768 - GAAGCTTTTGGG-------------GGTAGACATTC-ACCGTTTGACGCCCG---TCGGTTAGTTGT--CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13335:870661-870703 - GCACTGTT---G----GCGGCGAATAGCAGCCATTC-ACCGTTAGACGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396006:126355-126397 - GCACTGTT---G----GCGGCGAATAGCAGCCATTC-ACCGTTAGACGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302696:845599-845646 - GAAGCAGC---GGCCAAAGCGGCAGCGCCGCCATTCAACCGTTAGACGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454050:1266370-1266412 + AAAGC------------------GGCGATTTCATTCAACCGTTAGACGCCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491001:1748149-1748157 - TGGATAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droRho1 scf7180000779333:1069304-1069341 + G-----------------------GCGATTTCATTCAACCGTTAGACGCCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000298389:1243043-1243099 + GCAGCGTCACGG----AAAAGGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414740:69252-69300 + AA-----------------------CGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGTTTC--TTC------------------------------------GCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droEug1 scf7180000408958:337305-337361 - ACAGCGTCACGG----AAAAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:13268091-13268142 + GCCAT-----GG----AACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:12612069-12612118 + CAT-------GG----AACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_21:1021515-1021564 + CAT-------GG----AACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:7548499-7548550 + GCCAC-----GG----CACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:13601677-13601733 - GAAGCGCCACGA----ATCAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GAAGCATT---G----AACGCGCGTGGTAGCCATTC-ACCGTTTGACGCTCCTGCTCGGTTAGTAGC--CTCATCATATACATTTTTTTTTGTTTT-------TTTTTGTTTTTTGTTTGATATTATTTTA---TTTTGCGTCGTTTCGTG-TTTTCTGTT-------TTGT-GTTGGCGATTTG------TATG-TTATTGTGTTTCAT---GTGGCATCTAAACAAAACCAAAACCAAAACCAATTTGCATTTAACATTAACATTTAACTGAACTTGAACAGCGCGTAATTAATTCTTTGATTTCCTATTCT-GT-TAACACACACTTC----TTGCAGCTGCATGTCCAACAAAGCCCA-AAC--CATGAATGTCTTGCGCTTGAACAATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................TTTGACGCTCCTGCTCGGTTAG...........................................................................................................................................................................................................................................................................................................................................221338.0033837117220401104530102214231121271236463134445367300000100000000000000850
.........................................TTTGACGCTCCTGCTCGGTTAGT..........................................................................................................................................................................................................................................................................................................................................23158.00582113013312100000100211012131131020102001000000000000000000001420
.........................................TTTGACGCTCCTGCTCGGTTA............................................................................................................................................................................................................................................................................................................................................21122.0022010000001000001000100210201010040100001100000000000000000000130
.........................................TTTGACGCTCCTGCTCGGTT.............................................................................................................................................................................................................................................................................................................................................20118.00180111000000000001001001000100000010000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................C--CATGAATGTCTTGCGCTT........1917.007003100000000010000000100000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................A-AAC--CATGAATGTCTTGCGCTT........2215.005003100000000010000000000000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAGA..........................................................................................................................................................................................................................................................................................................................................2315.005001000000000101001000000001000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAAA..........................................................................................................................................................................................................................................................................................................................................2315.005000000000000000000000000000000000000311000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCA-AAC--CATGAATGTCTTGCGCTT........2414.004001100000000000000000000000000000000000000000000000000000000020
...............................CATTC-ACCGTTTGACGCTCC......................................................................................................................................................................................................................................................................................................................................................2013.003000100000000000001000000000000000000000000000000000000000000100
..AGCATT---G----AACGCGCGTGGTAGC...........................................................................................................................................................................................................................................................................................................................................................................2213.003001100000000000000000010000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAA...........................................................................................................................................................................................................................................................................................................................................2213.003000000000000000000000000000100000000001000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................ATGAATGTCTTGCGCTTGAAC....2113.003011000000000000000000000000000000000000000000000000000000000100
.........................GGTAGCCATTC-ACCGTTTGACGCTC.......................................................................................................................................................................................................................................................................................................................................................2513.003000200000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................A-AAC--CATGAATGTCTTGCGCTTG.......2313.003003000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CA-AAC--CATGAATGTCTTGCGCTT........2313.003000000000000000000000100000000000000000000000000000000000000020
..........................................TTGACGCTCCTGCTCGGTTAG...........................................................................................................................................................................................................................................................................................................................................2113.003003000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTCCAACAAAGCCCA-AAC--CATGAAT...................2512.002000000000000000101000000000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAT...........................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000010000000100000000000000000000000000000000
.....ATT---G----AACGCGCGTGGTAGCCATTC-ACC..................................................................................................................................................................................................................................................................................................................................................................2712.002101000000000000000000000000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAGC..........................................................................................................................................................................................................................................................................................................................................2312.002020000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTCCAACAAAGCCCA-AAC--CATGA.....................2312.002001000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCCA-AAC--CATGAATGTCTTG.............2112.002002000000000000000000000000000000000000000000000000000000000000
GAAGCATT---G----AACGCGCGTGGTAGC...........................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000010000000000000000000000000000000000000000000001000
..................CGCGCGTGGTAGCCATTC-ACC..................................................................................................................................................................................................................................................................................................................................................................2112.002000010000000000001000000000000000000000000000000000000000000000
.....ATT---G----AACGCGCGTGGTAGCC..........................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000001000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................AGCCCA-AAC--CATGAATGTCTTGCGCTT........2712.002000000000000000101000000000000000000000000000000000000000000000
...........G----AACGCGCGTGGTAGCCATT.......................................................................................................................................................................................................................................................................................................................................................................2012.002000100000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................AAC--CATGAATGTCTTGCGCTT........2112.002000000000000000000000000000000000010000000000000000000000000010
.........................................TTTGACGCTCCTGCTCGGTTAGG..........................................................................................................................................................................................................................................................................................................................................2312.002110000000000000000000000000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTT............................................................................................................................................................................................................................................................................................................................................2112.002010000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCCA-AAC--CATGAATGTCTTGCGCTT........2612.002001000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CA-AAC--CATGAATGTCTTGCGCT.........2212.002001000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................GCCCA-AAC--CATGAATGTCTTGC............2211.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCA-AAC--CATG......................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGCATGTCCAACAAAGCCCA-AAC--..........................2311.001000000000000000000000010000000000000000000000000000000000000000
............................AGCCATTC-ACCGTTTGACGCT........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.....ATT---G----AACGCGCGTGGTAG............................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCA-AAC--CATGAAT...................2311.001000000000000000001000000000000000000000000000000000000000000000
...............................CATTC-ACCGTTTGACGCTCCTGCTC.................................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
........................................GTTTGACGCTCCTGCTCG................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCCA-AAC--CATGAATGTCTTGCGCC.........2511.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CAAAGCCCA-AAC--CATGAATGT.................2111.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CATGAATGTCTTGCGCTTG.......1911.001000000000000000000000000000000100000000000000000000000000000000
...................................C-ACCGTTTGACGCTCCTGCTC.................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTCCAACAAAGCCCA-AAC--CATGAAT...................2611.001000000000000001000000000000000000000000000000000000000000000000
...........G----AACGCGCGTGGTAGCCA.........................................................................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
.......................................CGTTTGACGCTCCTGCTCG................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................TGACGCTCCTGCTCGGTTAG...........................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................TGACGCTCCTGCTCGGTTAGT..........................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTC............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................ACCGTTTGACGCTCCTGCT..................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................GTTTGACGCTCCTGCTCGC...............................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AGCCCA-AAC--CATGAATGTCTT..............2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTCCAACAAAGCCCA-AAC--..........................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAGTAAA--.....................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
.........................................TTTGACGCTCCTGCTCGGTTAGTT.........................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
..AGCATT---G----AACGCGCGTGG...............................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
.............................................ACGCTCCTGCTCGGTTAGTAG........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCA-AAC--CATGAATGTCTT..............2811.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CAACAAAGCCCA-AAC--CATGA.....................2011.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CAACAAAGCCCA-AAC--CATG......................1911.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGTCCAACAAAGCCCA-AAC--CATGAAT...................2711.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATGTCTTGCGCTTGAACA...1911.001001000000000000000000000000000000000000000000000000000000000000
..................CGCGCGTGGTAGCCATTC-A....................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................A-AAC--CATGAATGTCTTGCGCTTGA......2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTCCAACAAAGCCCA-AAC--CATGA.....................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CCCA-AAC--CATGAATGTCTTGCGCTT........2511.001001000000000000000000000000000000000000000000000000000000000000
...........................TAGCCATTC-ACCGTTTGACG..........................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AACAAAGCCCA-AAC--CATGAATGTC................2411.001000000000000000001000000000000000000000000000000000000000000000
.....................................ACCGTTTGACGCTCCTGCTCG................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................TCCTATTCT-GT-TAACACACACT.................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AC--CATGAATGTCTTGCGC..........1811.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CAAAGCCCA-AAC--CATGAATGTCTTGC............2611.001000000000000000000000010000000000000000000000000000000000000000
..AGCATT---G----AACGCGCGTGGTAGCC..........................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...........G----AACGCGCGTGGTAGCCATTC-ACCGTTT..............................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000001000000000000000000000000000000
..........................GTAGCCATTC-ACCGTTTGACGCTC.......................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CCAACAAAGCCCA-AAC--CAT.......................1911.001000000000000000001000000000000000000000000000000000000000000000
.................................TTC-ACCGTTTGACGCTCCTGCTCGG...............................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGCATGTCCAACAAAGCCCA-...............................2011.001000000000000000000000000000000000000000000000000000000000001000
.........................................TTTGACGCTCCTGCTCGGTTAGTC.........................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATGAATGTCTTGCGCTTGAACA...2211.001000000000000000000000001000000000000000000000000000000000000000
.....................................ACCGTTTGACGCTCCTGCTCGG...............................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.AAGCATT---G----AACGCGCGTGGT..............................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
...............................CATTC-ACCGTTTGACGCTCCTGC...................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....ATT---G----AACGCGCGTGGTAGC...........................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
GAAGCATT---G----AACGCGCGTGGTAGCC..........................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
................................ATTC-ACCGTTTGACGCTCCT.....................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CA-AAC--CATGAATGTCTTGC............1911.001000000000000000000000000000000000000000000000000000000000001000
............................AGCCATTC-ACCGTTTGAC...........................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GCATGTCCAACAAAGCCCA-AAC--CATG......................2611.001001000000000000000000000000000000000000000000000000000000000000
.....ATT---G----AACGCGCGTGGTAGCCATT.......................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................AAGCCCA-AAC--CATGAATGTC................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................TGACGCTCCTGCTCGGTTAGTAG........................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................CA-AAC--CATGAATGTCTTGCGCTTGA......2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CATGAATGTCTTGCGCTTGAACA...2311.001001000000000000000000000000000000000000000000000000000000000000
...............................CATTC-ACCGTTTGACGCTC.......................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AAGCCCA-AAC--CATGAATGTCTTGCGCT.........2711.001001000000000000000000000000000000000000000000000000000000000000
.......................GTGGTAGCCATTC-ACCGTTT..............................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................AGCCATTC-ACCGTTTGACG..........................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
......TT---G----AACGCGCGTGGTAGCC..........................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................AGCCATTC-ACCGTTTGACGCTC.......................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.................................TTC-ACCGTTTGACGCTCCTGCT..................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................A-AAC--CATGAATGTCTTGCGCTTGAACAA..2811.001001000000000000000000000000000000000000000000000000000000000000
..AGCATT---G----AACGCGCGTGGT..............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
GAAGCATT---G----AACGCGCGTGGTAGCCATTC-ACCGTTTAACGCTCCTGTTCGGTTAGTAGT--CCC--------------------CAAAAATTTATTCTTTGCTCGTTGTTTCGTCTTTTTTTT---TCTTTCTTTTTTACGTGGTTTTCGATT-------TTGT-TTTGTTTATTTT------CAAT-ATATT---TT---TGTAGTG----CCAACCGGAGGCAAAGCCG-AACGAGTTTGCATTTGACATTAAGCTG----TGAACTTTA---------------ATTTTTGATTTCCTTTTCCCGTTTATTCCGCCCTTTTTCTATATAGCAACATGTCCACCGCT------AGCAATGAGAAGGTCCTCTCCATGGGCAACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................TTTAACGCTCCTGTTCGGTTAG...........................................................................................................................................................................................................................................................................................................................................22111.0011302231
.........................................TTTAACGCTCCTGTTCGGTTAGT..........................................................................................................................................................................................................................................................................................................................................2314.004001030
...................................................................................................................................................................................................................................................................................................................................................................................GAAGGTCCTCTCCATGGGCAAC.2211.001100000
............................AGCCATTC-ACCGTTTAACGCTCCTGTTC.................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................GCCATTC-ACCGTTTAACGCTC.......................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................CAACATGTCCACCGCT------AGC............................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................ACCGCT------AGCAATGAGAAGGT.................2011.001000001
.........................GGTAGCCATTC-ACCGTTTAACGCTCCTG....................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................AACTTTA---------------ATTTTTGATTTCCTTTTCCC...............................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................CCACCGCT------AGCAATGAGAAG...................2011.001100000
............................................AACGCTCCTGTTCGGTTAGT..........................................................................................................................................................................................................................................................................................................................................2011.001000010
...GCATT---G----AACGCGCGTGGTAG............................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.......................................CGTTTAACGCTCCTGTTCGGTTAGT..........................................................................................................................................................................................................................................................................................................................................2511.001000010
.......T---G----AACGCGCGTGGTAGCCA.........................................................................................................................................................................................................................................................................................................................................................................1911.001000100
...................................C-ACCGTTTAACGCTCCTGTT..................................................................................................................................................................................................................................................................................................................................................2011.001100000
GAAGCATT---G----AACGCGCGTGGTA.............................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................................TC-ACCGTTTAACGCTCCTGTTC.................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............................GCCATTC-ACCGTTTAACGCTCCTGT...................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................GTTTAACGCTCCTGTTCGGT..............................................................................................................................................................................................................................................................................................................................................2011.001000001
....CATT---G----AACGCGCGTGGTAGCCAT........................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................GTAGCCATTC-ACCGTTTAACGCT........................................................................................................................................................................................................................................................................................................................................................2311.001000100
.........................................TTTAACGCTCCTGTTCGGTT.............................................................................................................................................................................................................................................................................................................................................2011.001000100
..............................................................................................................................................................................................................................................................................................................................................................................AATGAGAAGGTCCTCTCCATGG......2211.001000001
..............................................................................................................................................................................................................................................................................................................................................................................AATGAGAAGGTCCTCTCCATG.......2111.001100000
..................CGCGCGTGGTAGCCATTC-ACCG.................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................G----CCAACCGGAGGCAAAGCCG-AACGA.....................................................................................................................................................2511.001000010
droGri2
GAAACATT---G----AACGCGCGTGGTAGCCATTC-ACCGTTCGACGCTCCTTCTCGGTTAGTAGAAACCC---------AC-TTCCCCTCCTTGCGTTCGTTCTTCGCTTGCTGTTTTGCAAAATTTAACATTCGTGCGT-GCTTTGCA-TTTCCTGTTAATAACAGTGTTTTTAGTGTTTGGCTAAACTACA-TT-TTGTTTTTCTT---GTTT------------------------------------------------------------------------------TTTTCTG--TTCTTTTTTT-G------------TTTTTGTTTACAGCTGTATGTCGACGAAAAGCCAAAACAACATGAAATTCGTTACGATAGACAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................ATTC-ACCGTTCGACGCTCCTT....................................................................................................................................................................................................................................................................................................................................................2112.00211
......TT---G----AACGCGCGTGGTAGC...........................................................................................................................................................................................................................................................................................................................................................................1811.00110
..........................................................................................................................................................................................................................................................................................................................................................................AAACAACATGAAATTCGTTACGATA.......2511.00110
...........G----AACGCGCGTGGTAGCCA.........................................................................................................................................................................................................................................................................................................................................................................1811.00110
...........G----AACGCGCGTGGTAGCCATTC-ACC..................................................................................................................................................................................................................................................................................................................................................................2411.00110
droWil2
TTTTTGTTTTTT----TTTTTT-TTTGGTTTTGCACTTCCTTTTTTCGAT------------------------------------------------------------------------------------------------------------------------------------TCT------CGCTCCTGCT---T------------------------------------------------------------------------------------------------------------------------------TTGT----------------------------------------------------------GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GAAGCTTTTGGG-------------GGTAGACATTC-ACCGTTTGACGCCCG---TCGGTTAGTTGT--CCC------------------------------------TCTT---------------------------------------------------------------------------------------CT----------------------------------------------------------------------------------------------------------------------------------TGTT----------------------------------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
GAAGCTTTTGGG-------------GGTAGACAT........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
GAAGCTTTTGGG-------------GGTAGAC..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...............................CATTC-ACCGTTTGACGCCCG---TCGGTTG............................................................................................................................................................................................................................................................................................................................................2711.0010010000000
................................ATTC-ACCGTTTGACGCCCG---TC.................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..................................................CG---TCGGTTAGTTGT--CCC------------------------------------TCTT---------------------------------------------------------------------------------------...................................................................................................................................................................................................2111.0010100000000
...................................C-ACCGTTTGACGCCCG---TCGGTTAGTC.........................................................................................................................................................................................................................................................................................................................................2611.0010010000000
............................AGACATTC-ACCGTTTGACGCCC.......................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................................TTC-ACCGTTTGACGCCCG---...................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
...............................CATTC-ACCGTTTGACGCCCG---T..................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..............................ACATTC-ACCGTTTGACGCC........................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
droPer2
GAAGCTTTTGGG-------------GGTAGACATTC-ACCGTTTGACGCCCG---TCGGTTAGTTGT--CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................CATTC-ACCGTTTGACGCC........................................................................................................................................................................................................................................................................................................................................................1814.004400000
...............................CATTC-ACCGTTTGACGCCC.......................................................................................................................................................................................................................................................................................................................................................1912.002200000
..AGCTTTTGGG-------------GGTAGACATTC-ACC..................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..AGCTTTTGGG-------------GGTAGACATTC-AC...................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................GTAGACATTC-ACCGTTTGACGCCC.......................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................................C-ACCGTTTGACGCCCG---TCGGG..............................................................................................................................................................................................................................................................................................................................................2111.001100000
............................AGACATTC-ACCGTTTGACGCCCG---TC.................................................................................................................................................................................................................................................................................................................................................2511.001001000
...GCTTTTGGG-------------GGTAGACAT........................................................................................................................................................................................................................................................................................................................................................................1811.001000100
....CTTTTGGG-------------GGTAGACATT.......................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..........................GTAGACATTC-ACCGTTTGAC...........................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......TTGGG-------------GGTAGACATTC-AC...................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...................................C-ACCGTTTGACGCCCG---TCGGT..............................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................GTTTGACGCCCG---TCGGTTAGTTGT--C....................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................TTGACGCCCG---TCGGTTAGTTGT--C....................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................GGTAGACATTC-ACCGTTTGAC...........................................................................................................................................................................................................................................................................................................................................................2111.001100000
droAna3
GCACTGTT---G----GCGGCGAATAGCAGCCATTC-ACCGTTAGACGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................AGCCATTC-ACCGTTAGACG..........................................................................................................................................................................................................................................................................................................................................................1911.001000010
droBip1
GCACTGTT---G----GCGGCGAATAGCAGCCATTC-ACCGTTAGACGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GAAGCAGC---GGCCAAAGCGGCAGCGCCGCCATTCAACCGTTAGACGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAAGC------------------GGCGATTTCATTCAACCGTTAGACGCCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGGATAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
G-----------------------GCGATTTCATTCAACCGTTAGACGCCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCAGCGTCACGG----AAAAGGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AA-----------------------CGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGTTTC--TTC------------------------------------GCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
ACAGCGTCACGG----AAAAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCCAT-----GG----AACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................AACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................20114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000010010101010000000000000000
....................................AACCGTTAGACGTCCG---CCGGT..............................................................................................................................................................................................................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000010000000001000000000000000000010000000000000000000000000000000000100300000000001000001010000000000100000
................................ATTCAACCGTTAGACGTCCG---C..................................................................................................................................................................................................................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000010000000000100000000000000000000000000000000001000000200000100000000000000000000000000000000000000000001000100
................................ATTCAACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110001010000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................AACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000001002000000000000000001000
................................ATTCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000010000000010000000000000000000001000000000
................................ATTCAACCGTTAGACGTCCG---...................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000100000000001000000000000000
.......................................CGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000010001000000000000
................................ATTCAACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000110000000000000000
................................ATTCAACCGTTAGACGTCC.......................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000
................................ATTCAACCGTTAGACGTCCG---CCGGT..............................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..CAT-----GG----AACAAGCGGCGATTTCATT.......................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGTTAGACGTCCG---CCGGT..............................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000001000000000000000000000000
....................................AACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................AACCGTTAGACGTCCG---CCGGTT.............................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010
.........................CGATTTCATTCAACCGTTAGA............................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
..................................TCAACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................ATTCAACCGTTAGACGTCCG---CCGT...............................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
...AT-----GG----AACAAGCGGCGATTTC..........................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...............................CATTCAACCGTTAGACGTCCG---C..................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................AACAAGCGGCGATTTCATTCA.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................AACCGTTAGACGTCCG---CCGGTTAG...........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................CAACCGTTAGACGTCCG---CCGT...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAACCGTTAGACGTCCG---CCGC...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................ATTCAACCGTTAGACGTCCG---CCGGTTAG...........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCATTCAACCGTTAGACGTCC.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACAAGCGGCGATTTCATTCAAC...................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................TTCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATTCAACCGTTAGACGTCCG---CCGGC..............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............................CATTCAACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................ATTCAACCGTTAGACGTC........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAT-----GG----AACAAGCGGCGATTTC..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAACCGTTAGACGTCCG---C..................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.CCAT-----GG----AACAAGCGGCGATTT...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................AACCGTTAGACGTCCG---C..................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................GATTTCATTCAACCGTTAGACGTCC.......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................TTCATTCAACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..........................GATTTCATTCAACCGTTAGACGT.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CATTCAACCGTTAGACGTC........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCATTCAACCGTTAGACGTCCG---CCGGT..............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................ATTCAACCGTTAGACGTCCG---CCGGTT.............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................CGATTTCATTCAACCGTTAG.............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................ATTTCATTCAACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................TTCAACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAT-------GG----AACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................GATTTCATTCAACCGTTAGACGT.........................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
........................................GTTAGACGTCCG---CCGGT..............................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.......................................CGTTAGACGTCCG---CCGGTT.............................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................................CGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
...........................ATTTCATTCAACCGTTAGACGT.........................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................CATTCAACCGTTAGACGTCCG---C..................................................................................................................................................................................................................................................................................................................................................2220.50100000000001000000
......................................CCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................1720.50100000010000000000
................................ATTCAACCGTTAGACGTCCG---C..................................................................................................................................................................................................................................................................................................................................................2120.50100000000001000000
....................................AACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................1920.50110000000000000000
..................................TCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2020.50100000000001000000
...................................CAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................1920.50100100000000000000
................................ATTCAACCGTTAGACGTC........................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
droSec2
CAT-------GG----AACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................ATTCAACCGTTAGACGTCCG---...................................................................................................................................................................................................................................................................................................................................................2012.0022000
.......................................CGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.0011000
..........................GATTTCATTCAACCGTTAGACGTCCG---...................................................................................................................................................................................................................................................................................................................................................2611.0011000
...............................CATTCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................ATTCAACCGTTAGACGTC........................................................................................................................................................................................................................................................................................................................................................1811.0010010
.......................................CGTTAGACGTCCG---CCGGT..............................................................................................................................................................................................................................................................................................................................................1811.0010010
droYak3
GCCAC-----GG----CACAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................ATTCAACCGTTAGACGTCC.......................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................................ATTCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.........................................TTAGACGTCCG---CCGGTTAG...........................................................................................................................................................................................................................................................................................................................................1911.00110000000000
........................................GTTAGACGTCCG---CCGGTTT............................................................................................................................................................................................................................................................................................................................................1911.00100001000000
..........................................TAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1911.00110000000000
............................TTTCATTCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
....................................AACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................2011.00100001000000
droEre2
GAAGCGCCACGA----ATCAAGCGGCGATTTCATTCAACCGTTAGACGTCCG---CCGGTTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................AACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................1811.0010100000
...............................CATTCAACCGTTAGACGTCCG---CC.................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...................................CAACCGTTAGACGTCCG---CCGG...............................................................................................................................................................................................................................................................................................................................................2111.0010001000
..........................GATTTCATTCAACCGTTAGA............................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................ATCAAGCGGCGATTTCATTCAACC..................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
........................................GTTAGACGTCCG---CCGGTT.............................................................................................................................................................................................................................................................................................................................................1811.0010000100
...................................CAACCGTTAGACGTCCG---CCG................................................................................................................................................................................................................................................................................................................................................2011.0010000010

Generated: 05/17/2015 at 03:32 AM