ID:

dvi_9130

 Coordinate:

scaffold_12928:6648380-6648530 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.3 -15.3 -14.7

Flybase annnotation

CDS [Dvir\GJ17022-cds]; exon [dvir_GLEANR_17527:1]; intron [Dvir\GJ17022-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

------------------------------####################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTAAGCTTACACCAGCCCTTCTAAACCAACATGTCGTTTTTTCGCTATGTGTAAGAGAAGGTCAGAAAAATGTACATACATATGTGTAGTGGAAGGTGCATAAGCAAGTGCGTGTGCGTGTGCGTGTATGTGTGTGTGCATTGCGTATGTATAAAAAATAAAACAAATCGCTAAGCGATTAACAACAAATTAAAAGTGCAAAGTAATCACTGTTAGTACATATATGAGCTTATATGTGTATGTACATGTAT
***************************************************************************************************..........((((((((((((((((((((......)))))).)))))))))))...............))).******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060674
9x140_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 V053
head
 SRR060678
9x140_testes_total
 M028
head
 SRR060655
9x160_testes_total
 SRR060657
140_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 M061
embryo
 SRR060679
140x9_testes_total
 SRR060688
160_ovaries_total
 GSM1528803
follicle cells		 V116
male body		 SRR060689
160x9_testes_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
................................GTCGTTTTTTCGCTATGTGTAAGAGA................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ATAAGCAAGTGCGTGTGCG..................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTCGTTTTTTCGCTATGTGTAAGAGAAG............................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CGGAAGGTGCAGAAGTAAGTGC............................................................................................................................................ 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................GTGTGTAGTGGAAGGTGCATA..................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GTGCATAAGCAAGTGCGTGTG....................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CGCTATGTGTAAGAGAAGGTCC........................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAAAAAATAAAACAAATCGCT............................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CATACATATGTGTAGTGGAAGGTGCAT...................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ATATGTGTAGTGGAAGGTGCATAAGC.................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................CTTTTTTTCGCTATGTGTAAGAGAA................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TAGTGGAAGGTGCATAAGCAA................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGTGTGTGCGTTGCGTATGTA.................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GGGCGTGTGCGTGTATGTGTGTGTTC................................................................................................................ 26 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................TGAGACGGTCAGGAAAATGT.................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCGTGTGCGTGTGCGTGTAT.......................................................................................................................... 20 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGTGCGTGTATGTGTGTGTGCA............................................................................................................... 22 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................GTGCGTGTATTTGTGTGTGCA............................................................................................................... 21 1 14 0.14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
...................................................................................................................................................................CAAATGGCTAAGCGGTTAAAA................................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................TGAAGGTGAGAAAAATGTAGA............................................................................................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................GAAGGTGAGAAAAATGTAGAG.............................................................................................................................................................................. 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GTGCGTGTATGTGTGTGTCCA............................................................................................................... 21 1 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ACCAGCCCTCCTTCACCAA.............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................GTGTGCGTGTGCGTGTAT.......................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................GCATGTGTGTGTGCATTG............................................................................................................ 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GTGCGTGTGCGTGTGCGTG............................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

CATTCGAATGTGGTCGGGAAGATTTGGTTGTACAGCAAAAAAGCGATACACATTCTCTTCCAGTCTTTTTACATGTATGTATACACATCACCTTCCACGTATTCGTTCACGCACACGCACACGCACATACACACACACGTAACGCATACATATTTTTTATTTTGTTTAGCGATTCGCTAATTGTTGTTTAATTTTCACGTTTCATTAGTGACAATCATGTATATACTCGAATATACACATACATGTACATA
*******************************************************************************..........((((((((((((((((((((......)))))).)))))))))))...............))).*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060673
9_ovaries_total
 M047
female body
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 V116
male body		 SRR060683
160_testes_total
 SRR060654
160x9_ovaries_total
.......................................AAAGCGATACACATTCTCTTC............................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................GATACACATTCTCTTCCAGTC.......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............TCGGGAAGATTTGGTTGT............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................GCACATACACACACACGTAACGCATAC...................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................TTGTACAGCAAAAAAGCGATA........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................AATCATGTATATACTCGAAT................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................GTTTACCGATTCGCCAATT..................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0
............GTTGGGAAGGTTTAGTTGTAC.......................................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0
....CGAATGCGGTTGTGAAGAT.................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................TGTTGTTAAATTTGCAGGTT.................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:6648330-6648580 + dvi_9130 GTAAGCT---TACA-----CCAGCCCTTCT-----------------A---------AACCAACATGTC--GT---TTT-TTCGCT------------------------ATGTGT-AAGAGAAGGTCAG------AAAAAT-----------GTACAT--------AC----AT-A--------------------------------------TGTGTAGTGGAAG-------------GTGCATAAGCAAGT----GCGTG-TG-CGTGTGCGT--------------------------------------------------------GTATG----TG----TGTGT----------GCA----------------------------------------------T---------------TG-----------CGT------------ATGTAT------------AAAAAATAAAACAAATCGC------------TAAGCGATTAACAAC----------AA---------------------------ATTAAAAGTGCAAAGTAATCACTGTTAGTACATATATGA----GCTTATATGTGTATGTACATGTAT
droMoj3 scaffold_6328:2331169-2331426 + GTGTGCT---TACG-----CTGGTCCGTCT-----------------A---------CAGCAATATATGTATT---TTT-TTCTCT------------------------ATGTGC-AAGAGAAGGTCAG------AAAAAT-----------GTACAC--------ACATACAT-A--------------------------------------TGTGTAGTGGAAG-------------GTGCATAACCAAGT----GCGTG-TG-CGTGTGTGT--------------------------------------------------------ATGCG----AGTGTTTGTGT----------GCA----------------------------------------------T---------------TG-----------CGT------------ATGTAT---------CAG--AAGAAGAAACAATTCGC------------TAAGCGTTTAACAAC----------AA---------------------------ATTAAAAGTGCAAAGTAAGCACT----GTTTGTACATAT----ATGAGCTCATTTGCGTATGTGTAC
droGri2 scaffold_14853:7221937-7222187 - GTGAACT---AACA-----A--AACCGTGC-----------------A---------ACGCAAAATGTCTATT---TTC-CTCACC------------------------GTGTGT-AAGAGAAGGTCAG------AAAAAT-----------GTACAT--------TC----AT-A-----------------------TG-------------TGTGTAGTAGAAG-------------GTGCATAAGCAAGT----GCGTG-TG-AGTGTATCT------------------------------------------------------------G--------TATGTGT----------GCA----------------------------------------------T---------------TG-----------CGT------------ATGTAT------------AAAAA--AAAACAAATCGC------------AATGCGATTAACAAC----------AA---------------------------AATAAAAGTGCAAAGTAAGCACTGTTAGTACATACATAAACATACACATATCTGTGTGTATATGCGC
droWil2 scf2_1100000004963:2406765-2407067 - ACAAGCA---TACA-----CCA---TGTGC-----------------AACTTATTAATATTAACT--TC--AC---CTA-CACATC------------------------AAGTGT-AAGAGAAGATCCGAGTCAAATCACT-----------GTGCGAGGAATTTAAG----TT-C--------------------------------------TGTG-AGTA-----------------GTGTGTG-----------------CG-T----C------TATAGG----------------TGTATATGTCGTGTC--GT--------------------------------GTA--------TG------------------------------TGTGTGTGTGTGAGTGTAGGGCTAATA-CAGCTG-----------CGT------------ATGTATTACC-------G--AAAA--TAACAA------------------ATGTGTTCGACAGTAGCAACAACAAAAATTCAATTACCAAACGAGAATCACTACGAAAAACTGCATAGTAA-----------------GCAT----CTGTATATGTATGTTTACAAAAAT
dp5 XL_group1e:293926-294178 - GGCAATT---TGC-AATTT-----------------------------------CAGTGTATAAATGCC--GTTTT---ACTTGTA------------------------ATGTTCAAAGAGAAGGTCAG------AAAAAT-----------GTACAC--------AG----TT-C--------------------------------------TGTGTAGTAGCAGCA-----------GTGCATA------------------GAT-----------TGTAGG----------------CATACCTGCGCTCCCAAGT--------------------------------GTA--------AG------------------------------TGTGTGCGTGTGCGCATAATGTT-ATA-CAGCTGTCGCCGCCTATCGT------------GTGTAT---------CAG--TGAA--TAACAA------------------ATGTGATCAACAAA----------AA---------------------------------AGTGCATTGTAAGCATTGTT----------------------AATGCATTCACATACACG-
droPer2 scaffold_60:37291-37543 + GGCAATT---TGC-AATTT-----------------------------------CAGTGTATAAATGCC--GTTTT---ACTTGTA------------------------ATGTTCAAAGAGAAGGTCAG------AAAAAT-----------GTACAC--------AG----TT-C--------------------------------------TGTGTAGTAGCAGCA-----------GTGCATA------------------GAT-----------TGTAGG----------------CATACCTGCGCTCCCAAGT--------------------------------GTA--------AG------------------------------TGTGTGCGTGTGCGCATAATGTT-ATA-CAGCTGTCGCCGCCTATCGT------------GTGTAT---------CAG--TGAA--TAACAA------------------ATGTGATAAACAAA----------AA---------------------------------AGTGCATTGTAAGCATTGTT----------------------AATGCATTCACATACACG-
droAna3 scaffold_13117:5608247-5608480 - GTGAATG---ACC--------A---TTTTA-----------------AAGTTGT-------------TC--CTTTT---GGTTCAA------------------------AACGTCGCCGAGAAGGTCAGAATCAGAAAAAT-----------GTACAC--------AG----TTTG--------------------------------------TGTGT---------------------------------GCCAGTGTGTG-TG-TGTGTGTGT--------------------------------------------------------GTGTG----AG----TGAGTGTATGTGTGTGTATGATATAGGGAAGAGGGGGGTAGGAGTACAATTGTGTGAGTGCGCAGAAAGTT-ATA-CAGCTG----------GCGT------------ATGTATCAGCGAAATCAG--TAAA--TAACAA------------------CTGTGAT-----------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396540:42920-43092 + ATGAGAT---AACG-----T--------------------------------------------------------TAC-TTTAC------------------------------------------------------TAT-----------ATGTAT--------AT-------------------------------------------------------------GTATATGTATA-----------TGT----ATAT-GT---------ATATGTATATGTATATGTATATGTATATGTATATGC------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTAT
droKik1 scf7180000302469:1786711-1786933 - AACTTATCCTCGC-ACTTG-----------------------------------CGAAATAAGCATTCC--GAAAT---TTTCGCA------------------------ACATG--------CGGTCAA------AAA-AG-----------GTATGT--------ACATATGT-A--------------------------------------TGTAT-------------------------------GTTG----GCATA-TG-TGTGTATGTG--------------------------------------------------------GATG----TGCG------------------------------------------------------------------TTGAGG----------TG-----------CAT------------ATGCAT------------GCATA--AATGCAAATTAAATCGAAATTTAACACGTGGTTTACTTC----------TA---------------------------------ATTTCATTTTT--------AGCTGTATGTATGT----TGGCATATGTGTATGTATGTATGT
droFic1 scf7180000453901:452436-452604 - GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AAAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGCATATCTGCGG----CCGTG-TG-TGTGTTCGTG--------------------------------------------------------------------------------------CG------------------------------TGCGTGTGAGTGCGCAGAAAGTT-ATA-CAGCTGTCATCGACTGGCTT------------ATTTAT---------CAA--TAAA--TAACCA------------------CTGTAACC----------------------------------------------------------------------GTCAGAAAACGCCA----GTTACTGGGTAAATGCGTATATAA
droEle1 scf7180000491006:2881512-2881693 + GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AAAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGCATACCTGCGC----CCGTG-TG-TGTGTGTGTG--------------------------------------------------------TGTG----TCCGTATGTG--AACG------TG------------------------------TGCGTGTGAGTGCGCAGAAAGTT-ATACCAGCTGTCATCGACTGGCGT------------ATTTAT---------CAA--TAAA--TAACTA------------------CTGTGATCAACAGA----------AA----------------------------------------------------------------------ACTTCAGTTACTGGGTAATTGCAT
droRho1 scf7180000770833:655-847 - CATAT-----------------------------------------------------------------------------------------------------------------------ATATGT------ATATAT-----------GTATAT--------AT--------GTATATATGTATATATGTATATATGTAT---------------------------ATATGTATA-----------TAT----GTAT-AT---------ATGTATATATGTATATATGTATATATGTATATATGT------ATATATGTATATATGTATATATGTATAT------------------------------------------------------------------------------------A-----------TGTATATATGTATATATGT----------------------------------------------------------------------------------------------------------------------------ATATATGTATATAT----GTATATATGTATATATGTATATAT
droBia1 scf7180000300828:85-257 - GCTGTTTCTTCGT----T--------------------------------------------------------TT---TGCTG-------------------------------------AAAACTTAG------AAAAATAGACGGAGCGTATATGT--------ATATATAT-A--------------------------------------TGT-----------------------------------------------------------------------ATGTATATGTATATGTATATGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTAT
droTak1 scf7180000415864:222939-223032 - A---------------------------------------------------------------------------------------------------------------------------GGTCAG------AAAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGCATACCTGCGC----CCGTG-TG-TGTGTGCCT--------------------------------------------------------GTGCC----TG----TGT--GTG--------TG------------------------------TGCGTGTGAGTGCGCAGAAAGTT-ATA-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409801:544809-545026 + ATATCTC---TG-------CT---------GGTTTAGTAGCAGTATCA---------AATTAAAAATTC--GA---TTT-TTTCTTGCACGAAATAAGCTTGGATCCAC-----------------------------------------------------------T-------------------------------------------------------------GTATATATATA-----------TAT----ATAT-AT---------ATATATATATGAATATGTATATTTCTATGTATGTGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TGTATGTAAGTGTATATGC----------------------------------------------------------------------------------------------------------------------------AAGTGTATATGTAA----GTGTATATGTAAGTGTATATGTAT
dm3 chrUextra:26950111-26950358 - AACAACT-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCTCCACTATATGT-AT-----ATATGT------ATATAT-----------GTATAT--------AT--------GTATATATGTATATATGTATATATGTATATATGTATAT---------------ATGTATATATG-----------TAT----ATAT-GT---------ATATATGTATATATGTATATATGTATATATGTATAT------ATGTATATATGTATATATGTATATATGT------------------------------------------------------------------------------------A-----------TATATGTATATATGTATAT----------------------------------------------------------------------------------------------------------------------------ATGTATATATGTAT----ATATGTATATATGTATATATGTAT
droSim2 x:3698005-3698166 + GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AGAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGTAAATTTGTGT----GCGTG-TG-TGTGGGTGCG--------------------------------------------------------TACA----TC----CGT--GT--------GCG------------------------------CTCGTGTGAGTGCGCAGAAAGTT-ATA-CAGCTGTCATCGACTGGCGT------------ATTTAT---------CAA--TAAA--TGACTA------------------CTGTGATCAGCGAA----------AA-----------------------------------------------------------------------------------ACTTCAGTTAC
droSec2 scaffold_12497:147-313 - GACAA-----------------------------------------------------------------------------------------------------------------------ATGTAT------ATGTAT-----------ATGTAT--------AT-------------------------------------------------------------GTATATGTATA-----------TGT----ATAT-GT---------ATATGTATATGTATATGTATATGTATATGTATATGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTAT
droYak3 4:399999-400162 + ACGAAAC---CGTA-----TAAATCCACGT-----------------G---------TTATGAAATGCGTG-----------------------------------------------------------------------------------------------------------------------------AATAAATCT----------------------------------------------TAAA----TCTAA-A-----------------------ACGAATGCATATATGTATATGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTAT
droEre2 scaffold_4929:25044455-25044640 + TATGTGT---AGTG-----T------------------------------------------------------------------------------------------------------ATGTACTG------GAGTAT-----------GTATGT--------AT----GT-A-------------------TGTATGTAT----------------------------------------------GTAA----TCATG-TA-TGTATGTATGTATGTATGTATGTAGGCATGTATGTATGTATGT------ATGCTTGTACACATGTATGTATGTATGT------------------------------------------------------------------------------------G-----------TGTATGTATTGGTGTATGT----------------------------------------------------------------------------------------------------------------------------ATGTATGTATGTAT----GTGTGTATGTATTGGTGTATGTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTAAGCT---TACA-----CCAGCCCTTCT-----------------A---------AACCAACATGTC--GT---TTT-TTCGCT------------------------ATGTGT-AAGAGAAGGTCAG------AAAAAT-----------GTACAT--------AC----AT-A--------------------------------------TGTGTAGTGGAAG-------------GTGCATAAGCAAGT----GCGTG-TG-CGTGTGCGT--------------------------------------------------------GTATG----TG----TGTGT----------GCA----------------------------------------------T---------------TG-----------CGT------------ATGTAT------------AAAAAATAAAACAAATCGC------------TAAGCGATTAACAAC----------AA---------------------------ATTAAAAGTGCAAAGTAATCACTGTTAGTACATATATGA----GCTTATATGTGTATGTACATGTATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................GTC--GT---TTT-TTCGCT------------------------ATGTGT-AAGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATAAGCAAGT----GCGTG-TG-CG....................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
..................................................................GTC--GT---TTT-TTCGCT------------------------ATGTGT-AAGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GTGCATAAGCAAGT----GCGTG-TG-......................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................CGCT------------------------ATGTGT-AAGAGAAGGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------AAAAAATAAAACAAATCGC------------T........................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................CAT--------AC----AT-A--------------------------------------TGTGTAGTGGAAG-------------GTGCAT...........................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................AT-A--------------------------------------TGTGTAGTGGAAG-------------GTGCATAAGC.......................................................................................................................................................................................................................................................................................................................................................................................2611.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TAGTGGAAG-------------GTGCATAAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GCGTG-TG-CGTGTGCGT--------------------------------------------------------GTAT.................................................................................................................................................................................................................................................................................................2060.171000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGTGCGT--------------------------------------------------------GTATG----TG----TGTGT----------GCA----------------------------------------------......................................................................................................................................................................................................................2260.171000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................GTG-TG-CGTGTGCGT--------------------------------------------------------GTAT.................................................................................................................................................................................................................................................................................................18200.051000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GT----GCGTG-TG-CGTGTGCGT--------------------------------------------------------G....................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
GTGTGCT---TACG-----CTGGTCCGTCT-----------------A---------CAGCAATATATGTATT---TTT-TTCTCT------------------------ATGTGC-AAGAGAAGGTCAG------AAAAAT-----------GTACAC--------ACATACAT-A--------------------------------------TGTGTAGTGGAAG-------------GTGCATAACCAAGT----GCGTG-TG-CGTGTGTGT--------------------------------------------------------ATGCG----AGTGTTTGTGT----------GCA----------------------------------------------T---------------TG-----------CGT------------ATGTAT---------CAG--AAGAAGAAACAATTCGC------------TAAGCGTTTAACAAC----------AA---------------------------ATTAAAAGTGCAAAGTAAGCACT----GTTTGTACATAT----ATGAGCTCATTTGCGTATGTGTACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................GCG----AGTGTTTGTGT----------GCA----------------------------------------------T---------------TG-----------C........................................................................................................................................................................................2111.001000001
.................................................................................................................................................................................................................................................................................GTGT--------------------------------------------------------ATGCG----AGTGTTTGG...................................................................................................................................................................................................................................................................................1870.141000001
droGri2
GTGAACT---AACA-----A--AACCGTGC-----------------A---------ACGCAAAATGTCTATT---TTC-CTCACC------------------------GTGTGT-AAGAGAAGGTCAG------AAAAAT-----------GTACAT--------TC----AT-A-----------------------TG-------------TGTGTAGTAGAAG-------------GTGCATAAGCAAGT----GCGTG-TG-AGTGTATCT------------------------------------------------------------G--------TATGTGT----------GCA----------------------------------------------T---------------TG-----------CGT------------ATGTAT------------AAAAA--AAAACAAATCGC------------AATGCGATTAACAAC----------AA---------------------------AATAAAAGTGCAAAGTAAGCACTGTTAGTACATACATAAACATACACATATCTGTGTGTATATGCGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CT---AACA-----A--AACCGTGC-----------------A---------ACGCAAAATGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
droWil2
ACAAGCA---TACA-----CCA---TGTGC-----------------AACTTATTAATATTAACT--TC--AC---CTA-CACATC------------------------AAGTGT-AAGAGAAGATCCGAGTCAAATCACT-----------GTGCGAGGAATTTAAG----TT-C--------------------------------------TGTG-AGTA-----------------GTGTGTG-----------------CG-T----C------TATAGG----------------TGTATATGTCGTGTC--GT--------------------------------GTA--------TG------------------------------TGTGTGTGTGTGAGTGTAGGGCTAATA-CAGCTG-----------CGT------------ATGTATTACC-------G--AAAA--TAACAA------------------ATGTGTTCGACAGTAGCAACAACAAAAATTCAATTACCAAACGAGAATCACTACGAAAAACTGCATAGTAA-----------------GCAT----CTGTATATGTATGTTTACAAAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................AGG----------------TGTATATGTCGTGTC--GT--------------------------------.................................................................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................AATCACT-----------GTGCGAGGAATTTAAG----TT-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..................................................................................................................................................................ATTTAAG----TT-C--------------------------------------TGTG-AGTA-----------------GTGT.............................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAAACTGCATAGTAA-----------------G...............................2111.00100010
.........................................................TATTAACT--TC--AC---CTA-CACATC------------------------AAGTGT-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.........................................................................................................................GAAGATCCGAGTCAAATCACT-----------GTGCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
................................................................................................................................................................................................................................................................................................................................T--------------------------------GTA--------TG------------------------------TGTGTGTGTGTGA.........................................................................................................................................................................................................................19200.05101000
dp5
GGCAATT---TGC-AATTT-----------------------------------CAGTGTATAAATGCC--GTTTT---ACTTGTA------------------------ATGTTCAAAGAGAAGGTCAG------AAAAAT-----------GTACAC--------AG----TT-C--------------------------------------TGTGTAGTAGCAGCA-----------GTGCATA------------------GAT-----------TGTAGG----------------CATACCTGCGCTCCCAAGT--------------------------------GTA--------AG------------------------------TGTGTGCGTGTGCGCATAATGTT-ATA-CAGCTGTCGCCGCCTATCGT------------GTGTAT---------CAG--TGAA--TAACAA------------------ATGTGATCAACAAA----------AA---------------------------------AGTGCATTGTAAGCATTGTT----------------------AATGCATTCACATACACG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------------ATGTGATCAACAAA----------AA---------------------------------AGTGC........................................................2511.0010100000000
..................................................................................................................................................................................................................................................TGCATA------------------GAT-----------TGTAGG----------------CATACCTGC...........................................................................................................................................................................................................................................................................................................................2411.0010000000010
..............AATTT-----------------------------------CAGTGTATAAATGCC--G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCGCATAATGTT-AT............................................................................................................................................................................................................2111.0010100000000
.................................................................TGCC--GTTTT---ACTTGTA------------------------ATGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
...............................................................................................................................................................................................................................AGCAGCA-----------GTGCATA------------------GAT-----------TGTAGG----------------C...................................................................................................................................................................................................................................................................................................................................2411.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTT-ATA-CAGCTGTCGCC...............................................................................................................................................................................................2111.0010100000000
..............AATTT-----------------------------------CAGTGTATAAATGCC--GT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
GGCAATT---TGC-AATTT-----------------------------------CAGTGTATAAATGCC--GTTTT---ACTTGTA------------------------ATGTTCAAAGAGAAGGTCAG------AAAAAT-----------GTACAC--------AG----TT-C--------------------------------------TGTGTAGTAGCAGCA-----------GTGCATA------------------GAT-----------TGTAGG----------------CATACCTGCGCTCCCAAGT--------------------------------GTA--------AG------------------------------TGTGTGCGTGTGCGCATAATGTT-ATA-CAGCTGTCGCCGCCTATCGT------------GTGTAT---------CAG--TGAA--TAACAA------------------ATGTGATAAACAAA----------AA---------------------------------AGTGCATTGTAAGCATTGTT----------------------AATGCATTCACATACACG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................ATA------------------GAT-----------TGTAGG----------------CATACCTGCGCT........................................................................................................................................................................................................................................................................................................................2412.002200000
..............................................................................................................................................................C--------AG----TT-C--------------------------------------TGTGTAGTAGCAGCA-----------GTGC.............................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................................................................................................................................................................................................................GTAGTAGCAGCA-----------GTGCATA------------------........................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...............................................................................................................TGTTCAAAGAGAAGGTCAG------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................C--------AG----TT-C--------------------------------------TGTGTAGTAGCAGCA-----------GT...............................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................CATA------------------GAT-----------TGTAGG----------------CATACCTGC...........................................................................................................................................................................................................................................................................................................................2211.001100000
..............AATTT-----------------------------------CAGTGTATAAATGCC--GTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droAna3
GTGAATG---ACC--------A---TTTTA-----------------AAGTTGT-------------TC--CTTTT---GGTTCAA------------------------AACGTCGCCGAGAAGGTCAGAATCAGAAAAAT-----------GTACAC--------AG----TTTG--------------------------------------TGTGT---------------------------------GCCAGTGTGTG-TG-TGTGTGTGT--------------------------------------------------------GTGTG----AG----TGAGTGTATGTGTGTGTATGATATAGGGAAGAGGGGGGTAGGAGTACAATTGTGTGAGTGCGCAGAAAGTT-ATA-CAGCTG----------GCGT------------ATGTATCAGCGAAATCAG--TAAA--TAACAA------------------CTGTGAT-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................TG----AG----TGAGTGTATGTGTGT.......................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACAATTGTGTGAGTGCG........................................................................................................................................................................................................................2211.001000010
...................................................................................................................................................................................................................................................................................................................................................................................TAGGGAAGAGGGGGGTAGGAGTACA......................................................................................................................................................................................................................................2511.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATCAGCGAAATCAG--TAA...................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................T--------------------------------------------------------GTGTG----AG----TGAGTGTATGT...........................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATA-CAGCTG----------GCGT------------ATGT......................................................................................................................................................................1811.001010000
..........................................................................................................................................................................................................................................................................G-TGTGTGTGT--------------------------------------------------------GTGTG----AG----TGAGTG................................................................................................................................................................................................................................................................................23110.091000001
........................................................................................................................................................................................................................GTGT---------------------------------GCCAGTGTGTG-TG-TGTGT.................................................................................................................................................................................................................................................................................................................................................................22160.061000001
.............................................................................................................................................................................................................................................................................GTGTGTGT--------------------------------------------------------GTGTG----AG----TGAGT.................................................................................................................................................................................................................................................................................20200.051100000
................................................................................................................................................................................G--------------------------------------TGTGT---------------------------------GCCAGTGTGTG-TG-......................................................................................................................................................................................................................................................................................................................................................................19200.051100000
..........................................................................................................................................................................................................................................................................G-TGTGTGTGT--------------------------------------------------------GTGTG----AG----T.....................................................................................................................................................................................................................................................................................18200.051010000
.........................................................................................................................................................................................................................TGT---------------------------------GCCAGTGTGTG-TG-TGTG..................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droBip1
ATGAGAT---AACG-----T--------------------------------------------------------TAC-TTTAC------------------------------------------------------TAT-----------ATGTAT--------AT-------------------------------------------------------------GTATATGTATA-----------TGT----ATAT-GT---------ATATGTATATGTATATGTATATGTATATGTATATGC------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTATSizeHit CountTotal NormTotal
No Reads
droKik1
AACTTATCCTCGC-ACTTG-----------------------------------CGAAATAAGCATTCC--GAAAT---TTTCGCA------------------------ACATG--------CGGTCAA------AAA-AG-----------GTATGT--------ACATATGT-A--------------------------------------TGTAT-------------------------------GTTG----GCATA-TG-TGTGTATGTG--------------------------------------------------------GATG----TGCG------------------------------------------------------------------TTGAGG----------TG-----------CAT------------ATGCAT------------GCATA--AATGCAAATTAAATCGAAATTTAACACGTGGTTTACTTC----------TA---------------------------------ATTTCATTTTT--------AGCTGTATGTATGT----TGGCATATGTGTATGTATGTATGTSizeHit CountTotal NormTotal
No Reads
droFic1
GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AAAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGCATATCTGCGG----CCGTG-TG-TGTGTTCGTG--------------------------------------------------------------------------------------CG------------------------------TGCGTGTGAGTGCGCAGAAAGTT-ATA-CAGCTGTCATCGACTGGCTT------------ATTTAT---------CAA--TAAA--TAACCA------------------CTGTAACC----------------------------------------------------------------------GTCAGAAAACGCCA----GTTACTGGGTAAATGCGTATATAASizeHit CountTotal NormTotal
No Reads
droEle1
GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AAAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGCATACCTGCGC----CCGTG-TG-TGTGTGTGTG--------------------------------------------------------TGTG----TCCGTATGTG--AACG------TG------------------------------TGCGTGTGAGTGCGCAGAAAGTT-ATACCAGCTGTCATCGACTGGCGT------------ATTTAT---------CAA--TAAA--TAACTA------------------CTGTGATCAACAGA----------AA----------------------------------------------------------------------ACTTCAGTTACTGGGTAATTGCATSizeHit CountTotal NormTotal
No Reads
droRho1
CATAT-----------------------------------------------------------------------------------------------------------------------ATATGT------ATATAT-----------GTATAT--------AT--------GTATATATGTATATATGTATATATGTAT---------------------------ATATGTATA-----------TAT----GTAT-AT---------ATGTATATATGTATATATGTATATATGTATATATGT------ATATATGTATATATGTATATATGTATAT------------------------------------------------------------------------------------A-----------TGTATATATGTATATATGT----------------------------------------------------------------------------------------------------------------------------ATATATGTATATAT----GTATATATGTATATATGTATATATSizeHit CountTotal NormTotal
No Reads
droBia1
GCTGTTTCTTCGT----T--------------------------------------------------------TT---TGCTG-------------------------------------AAAACTTAG------AAAAATAGACGGAGCGTATATGT--------ATATATAT-A--------------------------------------TGT-----------------------------------------------------------------------ATGTATATGTATATGTATATGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTATSizeHit CountTotal NormTotal
No Reads
droTak1
A---------------------------------------------------------------------------------------------------------------------------GGTCAG------AAAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGCATACCTGCGC----CCGTG-TG-TGTGTGCCT--------------------------------------------------------GTGCC----TG----TGT--GTG--------TG------------------------------TGCGTGTGAGTGCGCAGAAAGTT-ATA-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ATATCTC---TG-------CT---------GGTTTAGTAGCAGTATCA---------AATTAAAAATTC--GA---TTT-TTTCTTGCACGAAATAAGCTTGGATCCAC-----------------------------------------------------------T-------------------------------------------------------------GTATATATATA-----------TAT----ATAT-AT---------ATATATATATGAATATGTATATTTCTATGTATGTGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TGTATGTAAGTGTATATGC----------------------------------------------------------------------------------------------------------------------------AAGTGTATATGTAA----GTGTATATGTAAGTGTATATGTATSizeHit CountTotal NormTotal
No Reads
dm3
AACAACT-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCTCCACTATATGT-AT-----ATATGT------ATATAT-----------GTATAT--------AT--------GTATATATGTATATATGTATATATGTATATATGTATAT---------------ATGTATATATG-----------TAT----ATAT-GT---------ATATATGTATATATGTATATATGTATATATGTATAT------ATGTATATATGTATATATGTATATATGT------------------------------------------------------------------------------------A-----------TATATGTATATATGTATAT----------------------------------------------------------------------------------------------------------------------------ATGTATATATGTAT----ATATGTATATATGTATATATGTATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................CA---------ACT-------------------CT-------------------ATGCTCCACTATATGT-AT-----......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CA---------ACT-------------------CT-------------------ATGCTCCACTATATGT-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CA---------ACT-------------------CT-------------------ATGCTCCACTATATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------AT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CACCAACACCA---------ACT-------------------CT-------------------ATGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACAACT-----------------------GCAACAGCACCAACACCA---------AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------ATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CT-----------------------GCAACAGCACCAACACCA---------ACT-------------------CT-------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................AACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAACAGCACCAACACCA---------ACT-------------------CT-------------------ATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACAGCACCAACACCA---------ACT-------------------CT-------------------ATGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................T-----------GTATAT--------AT--------GTATATATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TATATGTATAT------ATGTATATATG..........................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGTATATATGTATATATGTATA............................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T--------AT--------GTATATATGTATATATG................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTATATATGTATAT----------------------------------------------------------------------------------------------------------------------------ATGT......................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ATAT-GT---------ATATATGTATATATGT...............................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TATGTATATATGTATATATGT.......................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TATGTATATATGTATAT---------------ATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TATGT-AT-----ATATGT------ATATAT-----------GTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................GTATAT---------------ATGTATATATG-----------TAT----A..............................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TATGT------------------------------------------------------------------------------------A-----------TATATGTATATATGT..........................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GTATATATGTATATATGT------------------------------------------------------------------------------------A-----------TAT......................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CTATATGT-AT-----ATATGT------ATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AGAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGTAAATTTGTGT----GCGTG-TG-TGTGGGTGCG--------------------------------------------------------TACA----TC----CGT--GT--------GCG------------------------------CTCGTGTGAGTGCGCAGAAAGTT-ATA-CAGCTGTCATCGACTGGCGT------------ATTTAT---------CAA--TAAA--TGACTA------------------CTGTGATCAGCGAA----------AA-----------------------------------------------------------------------------------ACTTCAGTTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCGACTGGCGT------------ATTTAT---------C..........................................................................................................................................................2115.00500000020000003000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGTCATCGACTGGCGT------------A.........................................................................................................................................................................2114.00400000000000004000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGCGT------------ATTTAT---------CAA--T.....................................................................................................................................................2114.00400000000000013000
.............................................................................................................................................................................................................................................................................................................................................................GT--GT--------GCG------------------------------CTCGTGTGAGTGCG........................................................................................................................................................................................................................2113.00300000000003000000
GA-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AGAAAT-----------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATCGACTGGCGT------------ATTTA.....................................................................................................................................................................2112.00200000000000002000
..................................................................................................................................................................................................................................................................................................................................................................T--------GCG------------------------------CTCGTGTGAGTGCGCAGA....................................................................................................................................................................................................................2212.00200000002000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGAAAGTT-ATA-CAGCTGTC..................................................................................................................................................................................................2212.00200002000000000000
.......................................................................................................................................................................................................................................................ATTTGTGT----GCGTG-TG-TGTGGG................................................................................................................................................................................................................................................................................................................................................................2112.00200000000002000000
.A-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AGAAAT-----------GTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000000000002000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------CAA--TAAA--TGACTA------------------CTGTGATCAGCGA...........................................................................................................2712.00200000002000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGCGT------------ATTTAT---------CA.........................................................................................................................................................2012.00200000000000011000
................................................................................................................................AG------AGAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGTA............................................................................................................................................................................................................................................................................................................................................................................................2112.00200100000001000000
.................................................................................................................................................................................................................................................................................................................................................................GT--------GCG------------------------------CTCGTGTGAGTGCGCA......................................................................................................................................................................................................................2111.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATCGACTGGCGT------------ATTTG.....................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCAGAAAGTT-ATA-CAGCTG....................................................................................................................................................................................................2311.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAGAAAGTT-ATA-CAGCTG....................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--TAAA--TGACTA------------------CTGTGATC................................................................................................................2111.00100000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGAGTGCGCAGAAAGTT-..............................................................................................................................................................................................................2111.00100000000000100000
.A-----------------------------------------------------------------------------------------------------------------------GAAGGTCAG------AGAAAT-----------GTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTA------------------CTGTGATCAGCGAA----------AA-----------------------------------------------------------------------------------...........2011.00100000001000000000
.............................................................................................................................GTCAG------AGAAAT-----------GTACAC--------AG------------------------------------------------------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
...............................................................................................................................CAG------AGAAAT-----------GTACAC--------AG------------------------------------------------------------------------GCG..............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--TGACTA------------------CTGTGATCAGC.............................................................................................................2111.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TA-CAGCTGTCATCGACTGGC........................................................................................................................................................................................2011.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCGACTGGCGT------------ATTTAT---------CA.........................................................................................................................................................2211.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATA-CAGCTGTCATCGACTGG.........................................................................................................................................................................................2111.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTA------------------CTGTGATCAGCGAA----------AA-----------------------------------------------------------------------------------ACTTCAGT...2811.00100000000001000000
..........................................................................................................................................AAAT-----------GTACAC--------AG------------------------------------------------------------------------GCGTAAATT........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGCGT------------ATTTAT---------CAA--......................................................................................................................................................2011.00100000000000001000
....................................................................................................................................................................................................................................................TAAATTTGTGT----GCGTG-TG-TGT...................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGCGT------------ATTTAT---------C..........................................................................................................................................................1911.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-CAGCTGTCATCGACTGGC........................................................................................................................................................................................2111.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------CAA--TAAA--TGACTA------------------CTGTGA..................................................................................................................2111.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGCGT------------ATTTAT---------CAA--......................................................................................................................................................2111.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--TGACTA------------------CTGTGATCAGCGAA----------................................................................................................2211.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TGACTA------------------CTGTGATCAGCGAA----------................................................................................................2111.00100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCGACTGGCGT------------ATTTAC---------...........................................................................................................................................................2011.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--TGACTA------------------CTGTGATCAG..............................................................................................................2011.00101000000000000000
.......................................................................................................................................................................................................................................................ATTTGTGT----GCGTG-TG-TGTGGT................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAAGTT-ATA-CAGCTGTCA.................................................................................................................................................................................................2111.00100000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAA----------AA-----------------------------------------------------------------------------------ACTTCAGT...1620.50100000000100000000
droSec2
GACAA-----------------------------------------------------------------------------------------------------------------------ATGTAT------ATGTAT-----------ATGTAT--------AT-------------------------------------------------------------GTATATGTATA-----------TGT----ATAT-GT---------ATATGTATATGTATATGTATATGTATATGTATATGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ACGAAAC---CGTA-----TAAATCCACGT-----------------G---------TTATGAAATGCGTG-----------------------------------------------------------------------------------------------------------------------------AATAAATCT----------------------------------------------TAAA----TCTAA-A-----------------------ACGAATGCATATATGTATATGT------ATATGTATATGTATATGTATATGTATAT------------------------------------------------------------------------------------G-----------TATATGTATATGTATATGT----------------------------------------------------------------------------------------------------------------------------ATATGTATATGTAT----ATGTATATGTATATGTATATGTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................AATCCACGT-----------------G---------TTATGAAATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEre2
TATGTGT---AGTG-----T------------------------------------------------------------------------------------------------------ATGTACTG------GAGTAT-----------GTATGT--------AT----GT-A-------------------TGTATGTAT----------------------------------------------GTAA----TCATG-TA-TGTATGTATGTATGTATGTATGTAGGCATGTATGTATGTATGT------ATGCTTGTACACATGTATGTATGTATGT------------------------------------------------------------------------------------G-----------TGTATGTATTGGTGTATGT----------------------------------------------------------------------------------------------------------------------------ATGTATGTATGTAT----GTGTGTATGTATTGGTGTATGTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................ATGTATGTATGTATGTATGTA..............................................................................................................................................................................................................................................................................................................................................21200.1533000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTAT----GTGTGTATGTA.............20200.0510000010
............................................................................................................................................................................................................................................................................................................................................TATGTATGTATGT------------------------------------------------------------------------------------G-----------TGTATG...................................................................................................................................................................................20200.0510001000

Generated: 05/19/2015 at 03:28 PM