ID:

dvi_9125

 Coordinate:

scaffold_12928:6610056-6610206 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.3 -5.8 -5.4 -5.3

Flybase annnotation

CDS [Dvir\GJ17016-cds]; exon [dvir_GLEANR_17521:2]; intron [Dvir\GJ17016-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
(TC)nSimple_repeatSimple_repeat+
mature
  1. dvi_9125  scaffold_12928:6610175-6610193 +
  2. scaffold_12963:869804-869822 -
star
  1. scaffold_12723:3445664-3445682 +
  2. scaffold_12855:5231479-5231497 +
  3. scaffold_12855:6031221-6031239 +
  4. scaffold_12855:7173875-7173893 +
  5. scaffold_12875:8668152-8668170 +
  6. scaffold_12875:20058109-20058127 +
  7. scaffold_12928:6308372-6308390 +
  8. dvi_9125  scaffold_12928:6610072-6610090 +
  9. scaffold_12932:1637970-1637988 +
  10. scaffold_12963:6654441-6654459 +
  11. scaffold_12963:9597106-9597124 +
  12. scaffold_12963:9839820-9839838 +
  13. scaffold_12970:641103-641121 +
  14. scaffold_13042:1023787-1023805 +
  15. scaffold_13047:13830707-13830725 +
  16. scaffold_13047:15388383-15388401 +
  17. scaffold_13049:6717400-6717418 +
  18. scaffold_13049:13061750-13061768 +
  19. scaffold_13049:19227423-19227441 +
  20. scaffold_13246:2268657-2268675 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAGCAATTGGCAATGACAAAACGAATCAATGAATCATTGAATCCAATTGCGGTACACATACTTTTGACACACACACAAACACACACACACACACAGACTCAACCAATGCGACAGCCAATGACCAAACACTAATGCAAATCCATTGCGTCTCTTTCTCTCTCTCTCTCACTCTCTCTCTTTCGCTCTTCCGCATATTCACAGGAGGCTTCTCCACTGAGCGCACATCAGCAACAGCAGCAGCAGCAACAACA
******************************************************************.............................((............((.((.....((..........((((((.....))))))...........)).......)).)).............))*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 M047
female body
 SRR060666
160_males_carcasses_total
 M061
embryo
 V053
head
 SRR060665
9_females_carcasses_total
 SRR060654
160x9_ovaries_total
 SRR060655
9x160_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
.........................................................................................................................................................................TCTCTCTCTTTCGCTCTTC............................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTAAGGCAAGTCCATTGGGT....................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................AATCCGTGAATCATCGAATC................................................................................................................................................................................................................ 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCAACA... 22 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCAGCAACAGCAGCAGCAGCA...... 21 0 20 0.10 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................ATCAGCAACAGCAGCAGCAGCAACA... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GATTACAGGAGGCTTCTCC....................................... 19 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATCTGCTACAGCAGCAGCAGCAACAACA 28 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AACAGCAGCAGCAGCAACAAC. 21 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCAGCAACAGCAGCAGCAGCAACA... 24 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................CCGTGAATCATCGAATCCA.............................................................................................................................................................................................................. 19 3 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATCAGCAACAGCAGCAGCA......... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................CATCAGCAACAGCAGCAGCAG........ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAACA... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCA...... 18 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATCAGCAACAGCAGCAGCAGCA...... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAAC.... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................ACACACACACAAACACACA...................................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTCGTTAACCGTTACTGTTTTGCTTAGTTACTTAGTAACTTAGGTTAACGCCATGTGTATGAAAACTGTGTGTGTGTTTGTGTGTGTGTGTGTGTCTGAGTTGGTTACGCTGTCGGTTACTGGTTTGTGATTACGTTTAGGTAACGCAGAGAAAGAGAGAGAGAGAGTGAGAGAGAGAAAGCGAGAAGGCGTATAAGTGTCCTCCGAAGAGGTGACTCGCGTGTAGTCGTTGTCGTCGTCGTCGTTGTTGT
***************************************************************.............................((............((.((.....((..........((((((.....))))))...........)).......)).)).............))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060665
9_females_carcasses_total
 V053
head
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060670
9_testes_total
 GSM1528803
follicle cells		 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060681
Argx9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
...............................................................................................................................TGATTACGTCTAGGTAAC.......................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAGTGTCCGCCGAAGAAGTTA.................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAGAGAAAACGCGAAGGCATA.......................................................... 21 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAGTGTGCTTTGAAGAGGTG..................................... 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................GGTTAATGGTCTGTGATT....................................................................................................................... 18 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................AGTCGTTGTCGTCGTCGTCGTTG.... 23 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................CAGGCGTAGAAGTGCCCT................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
....................TGCTTAGTTACCTATTCAC.................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................AACTGGCTTGTGATTCCG.................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................GAGAGAGAGAGAGTGAGAGAGA........................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:6610006-6610256 + dvi_9125 GAGCAATTGGCAATGACAAAACGAATCAATGAATCATTGAATCCA-----------------------------------------ATTG------------CGGTACACATACTTTTGACA------------------------------------------------------------CACACACAAACAC-ACACACA-------------------CACACAGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------TCAACCA-----------------------------------------------------------ATGC-----------------------------G--A-CAGCCAATGACCAAACACTAATGCAAATCCATTGCGT---CTCTTTCTCTCTCTCTCTCACTCT----------------------------------------------------------------------------CTCTCTT--------------------------------------TCGC--------------------------------------------------------------TCTTCCGC----------------------------------------------------------------AT-----ATTCACAGGAGGCTTCT-------CCACTGA----------------------GCGCAC---------ATCAGCAACAGCAGCAGCAGCAACAACA
droMoj3 scaffold_6328:2290071-2290282 + GAGCAATTGGCAATGGCAGAACGTATCATTGAATCAATGAAT----------------------------------------CACAATCG----------------ACG-----------------C-------------------ACACT------------------CCCACA-------CACACACAAACACA-------TATATATACAC-------------ATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----------------------------------------------------------AAGC-----------------------------G--G-CAGCCAATGACCAAGCACTAATACAAAT-----GCAT---CTC--------------------------------------------------------------------------------------------------------TG------------TCT----------CTCTCT------------------------------------------------------------------------CA----C----------------------------------------------------------------AC-----ACTTGCAGGAGGCTTCT-------CCATTGA----------------------GTGCAC---------ATCAGCAACATCAACAACAGCAGCAGCA
droGri2 scaffold_15112:2077405-2077670 + TAGCAAATGAAGGTGTCAAAATGACA--------------AG-----------CA---------------------------GACAC---------------CAGCAAAAAAATGACTCACA----C-------------------ACA--------------------CACAG-----------------ACAT-ACACACA-------------------CACACAGACACACACAGATAGATA-----------GCTGCCATTCTGGCTGGACGTGCAGTGGAGCGATGGATGGCCTTACTGAATAGAATGGCCTGCTGCTGGGCCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT-------CGTCC----------------------TGGCTGTCTGTCGGGCTAACTGTATAAACGACAGCAGCATT----------------------TTCT--------------------------------------------------------------AAC------------------------------------------------T------------------------TGC----ACC---------ATCAACAACAGCAACAGCAACAGCAACA
droWil2 scf2_1100000004902:4629245-4629475 + AAGCAAAA-----------------------------TAGACACAGCTCAAGACTCAAAGCAAATC--------------------------------------------------------------------------------------------------CTAAAT---------------------CC-----------A--------T-------------ATATATAT----------A--------------------------------------------------------------------------------------------------------------------------------------------------------------TATA------------------------------------------------------AA-ACAAAACGTACATCCAAAGTGCGTAC----------AGCAC-------------------------------------------CAGTATGCT--GAACTCA-AATGCC-------------------AA-CAACA-ACAACAGCAGCC----------------------------------GTAGGTCCTTTTCACGCAACTCCTCATCGGC--------------------------------------------------------------CCGTTCCC----------------------------------------------------------------AT---------CGTGGCGGACGTATGCT---ATACT------------------------CCCCAC---------ATCCGCATCCTCAGCAGCAGCAGCAGCA
dp5 4_group5:2101767-2102000 - TGGA-TTTT----------------------------TGGATTTGGTTG-TGGCT---------------------------TACACTACACACACACACACCTACACC--------------------------------------------------TAC------ACATACACGTA-CACG----TATA---------------------------GAC-----ACACGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------TTGAATGGGAATCCCTTTTTCGGGGGTAAACCCACTTTCAATGGGAGACCAAAACTTTTTCTTTA-------CGCCT----------------------A-CTTT------------------------------------------------------------------------CA----C----------------------------------------------------------------AC-----ACATCCAACAGGT------------------TCCATAT---CGTCATGCGACAGCGGCT---------ATGTGCATCAGCAGCAGCAGCAACAGCA
droPer2 scaffold_5:6482684-6482921 - TGGA-TTTT----------------------------TGGATTTGGTTG-TGGCT---------------------------TACACTACACA---------------------------------C-------------------ACACACCTACACCTACACATACAC---------------------G-----------TACACGTACACGTATAGAC-----ACACGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------TTGAATGGGAATCCCTTTTTCGGGGGTAAACCCACTTTCAATGGGAGACCAAAACTTTTTCTTTA-------CGCCT----------------------A-CTTT------------------------------------------------------------------------CA----C----------------------------------------------------------------AC-----ACATCCAACAGGT------------------TCCATAT---CGTCATGCGACAGCGGCT---------ATGTGCATCAGCAGCAGCAGCAACAGCA
droAna3 scaffold_13340:4179530-4179832 + AAACAATTGCCGGCGGCAAAACTAA---------------------------------------AT--------------------------------------------------------------------------------------------------AGATAT---------------------T-----------CA--------G-------------ATATGCGT----------GAGGGATACAAT--------------------------------------------------------------------TTGG---CAA---TCAGTGATAGCAAGCCC----A-CCCAACCACT-TAGCCGCCACC---------CACACAATTGT------CACTTGG------------------------------------------------------------------------------------GCAAACAATTTTCGATAACGATTTCGTCTGCTCTGTCTCTTTATTTCTCCCGTT----------------------------------------------------------------------------CCCCGTT--------------------------------------TCGCCC----------GCAGCGAGAAAGCTGATTTGAAATCCCGCTCGGATAGCA------------------------------------------------------------------CGAGTGGC-----------------CCTCAAGGAGAT------------------TCGATTTACACCACGCCCGCCGGCTTCC---------ATCATCACCAGCAGCAGCAGCAGCAACA
droBip1 scf7180000396641:1015108-1015296 + ATGCA----------------------------------------------------------------------------------------------------------------------------------------------CACA------------------C-------------------ATACAC-ACACACA-------------------CTCGCAGCGAAAAACAA--------------------------------------------------------------------------------------GTAGCTGCAA-------CGCATTGG----AGAGGGCT------------------------------------------------------------------------------------------------------------------------------------------CCAAACACT-------------------------------CGCTCTCTCGCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTGTTACGTTTGTTTGCCATTTT----CAT-----------------------------------GCT--CTCTCCCAGAGTCTTGGTTTTTTTTCGCAAT------------------GCCAAGAGAC---------GTCGGCAGCAGCAGCAGCAGCAGAAGCA
droKik1 scf7180000302258:83853-83998 + GGCA--------------------------------------------------------------------------------------------------------------------------C-------------------ACA--------------------CTCTG-----GCACACACACACAC---------------------------AC-----ACACACACA------------------------------------------------------------------------------------------------CTTTGGCTTG-GAAATTTA-------TGCTGTAAGCG--------------------------C-------------C----GCATGCAAATA-----------------------------------------------------------------------------------------------------------------------------------ATGTTAATTTA-AATGCG-------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAT----CAT-----------------------------------C-----------------------------------------------------GTCAGTGGCA-------GCATCAGTAACAGCAGCAGCAGCAACAGCA
droFic1 scf7180000454055:481556-481741 - CATA--------------------------------------------------------------------------------------------------------------------------TGCACATAAACA---------------------------GGCTG---------------------G------------------------------CACACAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------TCGACCAATTC-----------------AAATA-----------------------------------------------------------------------TGGCCAATGTTC--GCATTGTTGCA--------GCGC---CTT------------------------------------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------TCTGTTTGCCCGGGG----CATACTGTGCGTATGC---GCAATATGCCAGCCATCGCC--GGACTCTGACGGGGCTTTC-------TCACAGT----------------------G----T---------GGCAGCAGCAGCAGCAAAAGCAACAGCA
droEle1 scf7180000491006:2850874-2851044 + AAAT--------------------------------------------------------------------------------------------------------------------------TGAATACCAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTGACCATCGTCTGTGCTTTCAAGCGAACGCACTCCAACCACT-CAGCATCTAAC---------CATATAAATACATATATT-----------------------------------------------------------------------------------------------------------------GTAT---TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTTTGTATTTTG----T----------------------------------------------------------------GTGCT--TTACCTAGGAGGCTTCT-------CCACTGA----------------------GCGGC---------------CATCAGCAGCAGCAGCAGCAGCA
droRho1 scf7180000778060:38395-38607 - ATACAT--------------------------------------------------------------------------------------ACTTAGACAGCTTTAC--------------------------------------------------------ACACAC---------------------A-----------CA--------C-------------ACACACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------C----ACATACAAACACTTGATAATCTGAACTAGTTTTAATCAAAGCCAAACGAAAAC---------------------------------------------------------------------------------------------------------------------------------CAACCAAAACCGCTTAACCAAAACAGGCTCGCCA-------CGCTT----------------------TGGCTCCTCACCGGGCA----------GCAGCAACAACACTGAT------------------AGCTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCAGCA------------ACCAGCAGCAGCAGCAACAACAGCA
droBia1 scf7180000302075:139586-139734 + AGCA-ATTCGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGTCTG-GATTTCAA-------CACCCCAACCACTGCAGCCACTAAC---------CACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATGTATGT---GTATTCCTCTTCCTCGCATGGT--TTCCTTAGGAGGCTTCT-------CCACTGA----------------------GCGGTC---------ATCAGCAGCAGCAGCAGCAACAGCAGCA
droTak1 scf7180000415429:179102-179271 + CACA--------------------------------------------------------------------------------------------------------------------------CACACCCACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT----------------------------------------CACC-CGCCCACCACAGCCACGCCC-AC--------------CACCCGCA------------------------------------------------------------------------------------CACAC-------------------------------------------ACTCGCA-C--AG--CCA-GTTG----------------------------------------------CTGGGCTCGCTG-------CGTTACACCCCCTATCC----------G----------CTGC--------------------------------------------------------------CCG----C----------------------------------------------------------------CC-----ACCTGTCGGCGGCCGCC-------GTTGTGG----------------------CCGCCC---------AGCAGCAACAGCAACAGCAGCAACAACA
droEug1 scf7180000409553:234447-234591 + AAAT--------------------------------------------------------------------------------------------------------------------------TGAAAACCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTGACCATCGTCTG-GGCTTCAA-------CACACTAACCACT-GGACCACTAAC---------CATCC-----------------ATATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTT-------CGTCT----------------------TGTCTTCACAT------------------------------------------------------------------------------------------------------------------------------------------------------TAGGAGGCTTCT-------CCATTGA----------------------GCGGT---------------CATCAGCAGCAACAGCAGCG-TT
dm3 chr2L:9244107-9244365 + AAGCACCCCTTAATCCACATACTAAACATTAAACT-----------------------------------------------------ACATACTTAGACAGCTTTACA--------------------------------------------------CAC------ACTCACACATAACATACACACACCC---------------------------AC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGATGACCTGAACTAGTTTTAATCAATGCCAAACGAA-AC---------------------------------------------------------------------------------------------------------------------------------CAA------CCGCTTAACCAAAACAGGCTCGCCA-------CGCTT----------------------TGGCTCCTCACCGGGCA----------GCAGCAACAACACTGAT------------------AGTTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCGGCAACCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACA
droSim2 x:12560267-12560499 - GCGATACGGGCAACAGCACTACCAAT--------------------------------------AGCAATATAACAATAACA----ATAA--CA----------ATAACAATAACAATAACAATGACAAAAACCCACAGACGAGACCCCGA--GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC-----------------GCACGCGATCGCAGCAAAAGCTCAACTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTCTGCTCTAA----AAAAACGGAACC---CAAACGAGCCAAACCGAACC--GAACTCGCTGAGAGCTCCG-------C-----------------------------CGGCG---------ATGAGCAGCAGCAACAACAGCAGCAGCA
droSec2 scaffold_3:4703088-4703339 + AAGCACCCCTTAATCCACATACTAAACATTAAACT-----------------------------------------------------ACATACTTAGACAGCTTTATA--------------------------------------------------CAC------ACTCACACATAACACA----CACA---------------------------CAC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGATAACCTGAACTAGTTTTAATCAAAGCCAAACGAA-AC---------------------------------------------------------------------------------------------------------------------------------CAACCAAAACCGCTTAACCAAAACAGGCTCGCCA-------CGCTT----------------------TGGCTCCTCACCGGGCA----------GCAGCAGCAACACTGAT------------------AGTTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCGGCA---------ACCAGCAGCAACAGCAGCAGCAGCAACA
droYak3 3R:28657160-28657340 - TTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------CAGCCACACACGCAC---------------------T-----------CA--------G-------------TCACACAG------------------------------------------------------------------------------------------------------------------------------------------------GACAAACACAATCA-----------------------------------------------------------AAGC-----------------------------GCTT-C----------AGCAG-------------------------------------------GCTAATGAA--GA--GCA-AATGCA-------------------A---------------------------ATGGCTCTA-------CGTTTGCTCTCGTATCTCTCTTTC-TGCGGCTCATTAATGCGCA----------TAATCA------------------------------------------------------------------------------------------------AAG------------------------------------------------T------------------------GGCAAAG-GC---------AGCCGCAACAGCAGCATCAGCAGCATCA
droEre2 scaffold_4690:13657629-13657858 + GCGATACGGGCAACAGCACTTCCAAT--------------------------------------AGCAATATAACAATAACA----ATAA--CA----------ATAA-----ACATTAACAATGACAAAAACCCACAGACGAGACCCAGA--GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC-----------------GCACGCGATCGCAGCAAAAGCTCAACTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTCTGCTCCAA-----AAAACGGAACC---CAAACGAGCCAAACCGAACC--GAACTCGCTGAGAGCTCCG-------CCG--------------------------GCGATG---------AGCAGCAGCAGCAGCAACAGCGGCAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GAGCAATTGGCAATGACAAAACGAATCAATGAATCATTGAATCCA-----------------------------------------ATTG------------CGGTACACATACTTTTGACA------------------------------------------------------------CACACACAAACAC-ACACACA-------------------CACACAGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------TCAACCA-----------------------------------------------------------ATGC-----------------------------G--A-CAGCCAATGACCAAACACTAATGCAAATCCATTGCGT---CTCTTTCTCTCTCTCTCTCACTCT----------------------------------------------------------------------------CTCTCTT--------------------------------------TCGC--------------------------------------------------------------TCTTCCGC----------------------------------------------------------------AT-----ATTCACAGGAGGCTTCT-------CCACTGA----------------------GCGCAC---------ATCAGCAACAGCAGCAGCAGCAACAACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT----------------------------------------------------------------------------CTCTCTT--------------------------------------TCGC--------------------------------------------------------------TCTTC..........................................................................................................................................................................1920.501000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCAACA...22200.102002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGCAGCAGCAGCA......21200.102001000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAGCAGCAGCAACA...25100.101000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAACAAC.21200.102000200000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGCAGCAGCAGCAACA...24120.081000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAGCAGCA.........19200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------ATCAGCAACAGCAGCAGCAG........21200.051000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAACA...20200.051000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCA......18200.051000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAGCAGCAGCA......22200.051000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAAC....22200.051000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACA------------------------------------------------------------CACACACAAACAC-ACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAGCAATTGGCAATGGCAGAACGTATCATTGAATCAATGAAT----------------------------------------CACAATCG----------------ACG-----------------C-------------------ACACT------------------CCCACA-------CACACACAAACACA-------TATATATACAC-------------ATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----------------------------------------------------------AAGC-----------------------------G--G-CAGCCAATGACCAAGCACTAATACAAAT-----GCAT---CTC--------------------------------------------------------------------------------------------------------TG------------TCT----------CTCTCT------------------------------------------------------------------------CA----C----------------------------------------------------------------AC-----ACTTGCAGGAGGCTTCT-------CCATTGA----------------------GTGCAC---------ATCAGCAACATCAACAACAGCAGCAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAACAACAGCAGCA...20170.061001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAACAGCAGCAGC.18200.051000010
droGri2
TAGCAAATGAAGGTGTCAAAATGACA--------------AG-----------CA---------------------------GACAC---------------CAGCAAAAAAATGACTCACA----C-------------------ACA--------------------CACAG-----------------ACAT-ACACACA-------------------CACACAGACACACACAGATAGATA-----------GCTGCCATTCTGGCTGGACGTGCAGTGGAGCGATGGATGGCCTTACTGAATAGAATGGCCTGCTGCTGGGCCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT-------CGTCC----------------------TGGCTGTCTGTCGGGCTAACTGTATAAACGACAGCAGCATT----------------------TTCT--------------------------------------------------------------AAC------------------------------------------------T------------------------TGC----ACC---------ATCAACAACAGCAACAGCAACAGCAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAGCAAAA-----------------------------TAGACACAGCTCAAGACTCAAAGCAAATC--------------------------------------------------------------------------------------------------CTAAAT---------------------CC-----------A--------T-------------ATATATAT----------A--------------------------------------------------------------------------------------------------------------------------------------------------------------TATA------------------------------------------------------AA-ACAAAACGTACATCCAAAGTGCGTAC----------AGCAC-------------------------------------------CAGTATGCT--GAACTCA-AATGCC-------------------AA-CAACA-ACAACAGCAGCC----------------------------------GTAGGTCCTTTTCACGCAACTCCTCATCGGC--------------------------------------------------------------CCGTTCCC----------------------------------------------------------------AT---------CGTGGCGGACGTATGCT---ATACT------------------------CCCCAC---------ATCCGCATCCTCAGCAGCAGCAGCAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................CTCAAAGCAAATC--------------------------------------------------------------------------------------------------CTAAAT---------------------CC-----------A--------T-------------ATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCC----------------------------------GTAGGTCC....................................................................................................................................................................................................................................................................1811.00100001
....AAAA-----------------------------TAGACACAGCTCAAGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------ATCCGCATCCTCAGCAGCAGC.......2211.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CAACA-ACAACAGCAGCC----------------------------------GTAGGT......................................................................................................................................................................................................................................................................2511.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTACATCCAAAGTGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---------ATCCGCATCCTCAGCAGCAGCAGC....2711.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------AA-CAACA-ACAACAGCAGCC----------------------------------............................................................................................................................................................................................................................................................................20200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------------------AA-CAACA-ACAACAGCAGC...............................................................................................................................................................................................................................................................................................................20200.05100010
dp5
TGGA-TTTT----------------------------TGGATTTGGTTG-TGGCT---------------------------TACACTACACACACACACACCTACACC--------------------------------------------------TAC------ACATACACGTA-CACG----TATA---------------------------GAC-----ACACGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------TTGAATGGGAATCCCTTTTTCGGGGGTAAACCCACTTTCAATGGGAGACCAAAACTTTTTCTTTA-------CGCCT----------------------A-CTTT------------------------------------------------------------------------CA----C----------------------------------------------------------------AC-----ACATCCAACAGGT------------------TCCATAT---CGTCATGCGACAGCGGCT---------ATGTGCATCAGCAGCAGCAGCAACAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------TCCATAT---CGTCATGCGACAG..........................................2111.0010100000000
droPer2
TGGA-TTTT----------------------------TGGATTTGGTTG-TGGCT---------------------------TACACTACACA---------------------------------C-------------------ACACACCTACACCTACACATACAC---------------------G-----------TACACGTACACGTATAGAC-----ACACGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------TTGAATGGGAATCCCTTTTTCGGGGGTAAACCCACTTTCAATGGGAGACCAAAACTTTTTCTTTA-------CGCCT----------------------A-CTTT------------------------------------------------------------------------CA----C----------------------------------------------------------------AC-----ACATCCAACAGGT------------------TCCATAT---CGTCATGCGACAGCGGCT---------ATGTGCATCAGCAGCAGCAGCAACAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AAACAATTGCCGGCGGCAAAACTAA---------------------------------------AT--------------------------------------------------------------------------------------------------AGATAT---------------------T-----------CA--------G-------------ATATGCGT----------GAGGGATACAAT--------------------------------------------------------------------TTGG---CAA---TCAGTGATAGCAAGCCC----A-CCCAACCACT-TAGCCGCCACC---------CACACAATTGT------CACTTGG------------------------------------------------------------------------------------GCAAACAATTTTCGATAACGATTTCGTCTGCTCTGTCTCTTTATTTCTCCCGTT----------------------------------------------------------------------------CCCCGTT--------------------------------------TCGCCC----------GCAGCGAGAAAGCTGATTTGAAATCCCGCTCGGATAGCA------------------------------------------------------------------CGAGTGGC-----------------CCTCAAGGAGAT------------------TCGATTTACACCACGCCCGCCGGCTTCC---------ATCATCACCAGCAGCAGCAGCAGCAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACCAGCAGCAGCAGC.......19180.112110000
droBip1
ATGCA----------------------------------------------------------------------------------------------------------------------------------------------CACA------------------C-------------------ATACAC-ACACACA-------------------CTCGCAGCGAAAAACAA--------------------------------------------------------------------------------------GTAGCTGCAA-------CGCATTGG----AGAGGGCT------------------------------------------------------------------------------------------------------------------------------------------CCAAACACT-------------------------------CGCTCTCTCGCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTGTTACGTTTGTTTGCCATTTT----CAT-----------------------------------GCT--CTCTCCCAGAGTCTTGGTTTTTTTTCGCAAT------------------GCCAAGAGAC---------GTCGGCAGCAGCAGCAGCAGCAGAAGCASizeHit CountTotal NormTotal
No Reads
droKik1
GGCA--------------------------------------------------------------------------------------------------------------------------C-------------------ACA--------------------CTCTG-----GCACACACACACAC---------------------------AC-----ACACACACA------------------------------------------------------------------------------------------------CTTTGGCTTG-GAAATTTA-------TGCTGTAAGCG--------------------------C-------------C----GCATGCAAATA-----------------------------------------------------------------------------------------------------------------------------------ATGTTAATTTA-AATGCG-------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAT----CAT-----------------------------------C-----------------------------------------------------GTCAGTGGCA-------GCATCAGTAACAGCAGCAGCAGCAACAGCASizeHit CountTotal NormTotal
No Reads
droFic1
CATA--------------------------------------------------------------------------------------------------------------------------TGCACATAAACA---------------------------GGCTG---------------------G------------------------------CACACAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------TCGACCAATTC-----------------AAATA-----------------------------------------------------------------------TGGCCAATGTTC--GCATTGTTGCA--------GCGC---CTT------------------------------------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------TCTGTTTGCCCGGGG----CATACTGTGCGTATGC---GCAATATGCCAGCCATCGCC--GGACTCTGACGGGGCTTTC-------TCACAGT----------------------G----T---------GGCAGCAGCAGCAGCAAAAGCAACAGCASizeHit CountTotal NormTotal
No Reads
droEle1
AAAT--------------------------------------------------------------------------------------------------------------------------TGAATACCAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTGACCATCGTCTGTGCTTTCAAGCGAACGCACTCCAACCACT-CAGCATCTAAC---------CATATAAATACATATATT-----------------------------------------------------------------------------------------------------------------GTAT---TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTTTGTATTTTG----T----------------------------------------------------------------GTGCT--TTACCTAGGAGGCTTCT-------CCACTGA----------------------GCGGC---------------CATCAGCAGCAGCAGCAGCAGCASizeHit CountTotal NormTotal
No Reads
droRho1
ATACAT--------------------------------------------------------------------------------------ACTTAGACAGCTTTAC--------------------------------------------------------ACACAC---------------------A-----------CA--------C-------------ACACACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------C----ACATACAAACACTTGATAATCTGAACTAGTTTTAATCAAAGCCAAACGAAAAC---------------------------------------------------------------------------------------------------------------------------------CAACCAAAACCGCTTAACCAAAACAGGCTCGCCA-------CGCTT----------------------TGGCTCCTCACCGGGCA----------GCAGCAACAACACTGAT------------------AGCTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCAGCA------------ACCAGCAGCAGCAGCAACAACAGCASizeHit CountTotal NormTotal
No Reads
droBia1
AGCA-ATTCGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGTCTG-GATTTCAA-------CACCCCAACCACTGCAGCCACTAAC---------CACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATGTATGT---GTATTCCTCTTCCTCGCATGGT--TTCCTTAGGAGGCTTCT-------CCACTGA----------------------GCGGTC---------ATCAGCAGCAGCAGCAGCAACAGCAGCASizeHit CountTotal NormTotal
No Reads
droTak1
CACA--------------------------------------------------------------------------------------------------------------------------CACACCCACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT----------------------------------------CACC-CGCCCACCACAGCCACGCCC-AC--------------CACCCGCA------------------------------------------------------------------------------------CACAC-------------------------------------------ACTCGCA-C--AG--CCA-GTTG----------------------------------------------CTGGGCTCGCTG-------CGTTACACCCCCTATCC----------G----------CTGC--------------------------------------------------------------CCG----C----------------------------------------------------------------CC-----ACCTGTCGGCGGCCGCC-------GTTGTGG----------------------CCGCCC---------AGCAGCAACAGCAACAGCAGCAACAACASizeHit CountTotal NormTotal
No Reads
droEug1
AAAT--------------------------------------------------------------------------------------------------------------------------TGAAAACCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTGACCATCGTCTG-GGCTTCAA-------CACACTAACCACT-GGACCACTAAC---------CATCC-----------------ATATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTT-------CGTCT----------------------TGTCTTCACAT------------------------------------------------------------------------------------------------------------------------------------------------------TAGGAGGCTTCT-------CCATTGA----------------------GCGGT---------------CATCAGCAGCAACAGCAGCG-TTSizeHit CountTotal NormTotal
No Reads
dm3
AAGCACCCCTTAATCCACATACTAAACATTAAACT-----------------------------------------------------ACATACTTAGACAGCTTTACA--------------------------------------------------CAC------ACTCACACATAACATACACACACCC---------------------------AC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGATGACCTGAACTAGTTTTAATCAATGCCAAACGAA-AC---------------------------------------------------------------------------------------------------------------------------------CAA------CCGCTTAACCAAAACAGGCTCGCCA-------CGCTT----------------------TGGCTCCTCACCGGGCA----------GCAGCAACAACACTGAT------------------AGTTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCGGCAACCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCACCGGGCA----------GCAGCAACAACA.....................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT----------------------TGGCTCCTCACCGGGC............................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCA----------GCAGCAACAACACTGAT------------------AGT...........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGATGACCTGAACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACATTAAACT-----------------------------------------------------ACATACTTAGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------------------------------------------------------------------------------CAA------CCGCTTAACCAAAACAGGCTC..................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------GCCGCCGGCAACCAGCAGCAGCA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACACTGAT------------------A.............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------GCAGCAACAACACTGAT------------------..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCGGCAACC..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCGGCAACCAGCA..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAACGAA-AC---------------------------------------------------------------------------------------------------------------------------------CAA------CCGCTTAACC.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAGCAGCAG.....21200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000070000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCAGCAGCAGCAACAGC...................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAGCAGCAGCAACAGCAGCA...............2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAACAGCAGCA......21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGCAGCAGCAACAGCAG.................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAGCAGCAACA2950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAGCAGCA......22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAACAGCAGC................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAGCAGC....19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAGCAGC....25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAAC.18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAGCAGCAACAGC..........24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAACAGCAGC.......26180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CACACACCC---------------------------AC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCAGC....21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAACAGCAGCA...............21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAGCAGCAGC....24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAGCAGCA...26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAACAGCAGCAGC....23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAACA............19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CACACACCC---------------------------AC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAGCAG.....24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACACACACCC---------------------------AC-----ACACACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCAGCAGCAA..22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAG........21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAACAGCAGCA......25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCAGCA......18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAGCAGCAACAG...........23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAACAGCA.........22200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAACAGCA.........24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAGC.......22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAACA22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACACACACCC---------------------------AC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAA..18200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCAGCA......23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAGCA.........19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGATACGGGCAACAGCACTACCAAT--------------------------------------AGCAATATAACAATAACA----ATAA--CA----------ATAACAATAACAATAACAATGACAAAAACCCACAGACGAGACCCCGA--GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC-----------------GCACGCGATCGCAGCAAAAGCTCAACTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTCTGCTCTAA----AAAAACGGAACC---CAAACGAGCCAAACCGAACC--GAACTCGCTGAGAGCTCCG-------C-----------------------------CGGCG---------ATGAGCAGCAGCAACAACAGCAGCAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AAGCACCCCTTAATCCACATACTAAACATTAAACT-----------------------------------------------------ACATACTTAGACAGCTTTATA--------------------------------------------------CAC------ACTCACACATAACACA----CACA---------------------------CAC-----ACACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGATAACCTGAACTAGTTTTAATCAAAGCCAAACGAA-AC---------------------------------------------------------------------------------------------------------------------------------CAACCAAAACCGCTTAACCAAAACAGGCTCGCCA-------CGCTT----------------------TGGCTCCTCACCGGGCA----------GCAGCAGCAACACTGAT------------------AGTTC--------------------------------------------------------------AGC------------------------------------------------T------------------------GCCGCCGGCA---------ACCAGCAGCAACAGCAGCAGCAGCAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCA...19200.1020020
droYak3
TTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------CAGCCACACACGCAC---------------------T-----------CA--------G-------------TCACACAG------------------------------------------------------------------------------------------------------------------------------------------------GACAAACACAATCA-----------------------------------------------------------AAGC-----------------------------GCTT-C----------AGCAG-------------------------------------------GCTAATGAA--GA--GCA-AATGCA-------------------A---------------------------ATGGCTCTA-------CGTTTGCTCTCGTATCTCTCTTTC-TGCGGCTCATTAATGCGCA----------TAATCA------------------------------------------------------------------------------------------------AAG------------------------------------------------T------------------------GGCAAAG-GC---------AGCCGCAACAGCAGCATCAGCAGCATCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCATCAGCA......18200.05101000000000
droEre2
GCGATACGGGCAACAGCACTTCCAAT--------------------------------------AGCAATATAACAATAACA----ATAA--CA----------ATAA-----ACATTAACAATGACAAAAACCCACAGACGAGACCCAGA--GCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC-----------------GCACGCGATCGCAGCAAAAGCTCAACTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTCTGCTCCAA-----AAAACGGAACC---CAAACGAGCCAAACCGAACC--GAACTCGCTGAGAGCTCCG-------CCG--------------------------GCGATG---------AGCAGCAGCAGCAGCAACAGCGGCAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 08:16 PM