dvi_9073

CDS [Dvir\GJ16987-cds]; exon [dvir_GLEANR_17494:4]; CDS [Dvir\GJ16987-cds]; exon [dvir_GLEANR_17494:5]; intron [Dvir\GJ16987-in]

GAAGTTCGGTAACTAACACAGGTTACACGACGCGAGGTATGCGGACGAGACATTCATGAGAGAACGGTGTGAGAGCGTTAGAGAGAAAGTTGACAAACTAAACAGCTAAACGTCGGCTACCGTCGGCGTGGAAATGCCGTTTGACGCACTTACCGTAAGTCCGG ************************************************.......((................((((((......((((....))))......)))).))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060666 160_males_carcasses_total	V053 head	SRR060662 9x160_0-2h_embryos_total	SRR060678 9x140_testes_total
.............................................CGAAGCATTCATGAGAGAACC..................................................................................................	21	3	1	1.00	1	1	0	0	0
................................................................................................................TCGGCTACAGTCTGCGTGGT................................	20	3	5	0.20	1	0	1	0	0
...............................GCTAGTTATGCGGACGAAAC.................................................................................................................	20	3	5	0.20	1	0	0	1	0
................................................................CGGTGTAAGAGCGTCAGAGT................................................................................	20	3	6	0.17	1	0	1	0	0
.................................................................................................CCAAACAGCTAATCGTCGAC...............................................	20	3	12	0.08	1	0	0	0	1
.................................................................................................................CGGCTACAGTGGGCGTGGG................................	19	3	20	0.05	1	0	1	0	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12928:6058332-6058495 +	dvi_9073	CTTCAAGCCATTGATTGTGTCCAATGTGCTGCGCTCCATACGCCTGCTCTGTAAGTA-------------CT---C-TC-TTGCCACACTC--TCGCAATCTCTCTT-------------------------------------------------------------------------------------------------------------------------------------------TCAA-C-TGTTTGAT---------TTGTCG-ATTTGCAGCCGATGGCAGCCGCACCTTTACGGCAAACTGCGTGAATGGCATTCAGGCC
droMoj3	scaffold_6359:4419474-4419640 +		GTTCAAGCCACTGATTGTCTCCAATGTGCTGCGCTCAATTCGTCTGCTCTGTAAGTA-------------AAGAA------------------------------------ATTAGTATAATCCGAAGCAGCTCTC-------------------------------ATCCAATTTT-------------------------------------------------TGTT----------------C----------------------CTTCTCA-TCTTGCAGCCGATGGTAGTCGAACCTTCACGGCCAACTGTGTCAATGGCATAAAGGCC
droGri2	scaffold_14853:5031426-5031598 +		GTTCAAGCCTTTGATTGTGTCCAATGTGCTGCGTTCCATCCGCCTACTCTGTAAGTA-------------GC-TTCACT-TGCCATCAGTC--TCCAATTCTCTCTCTCAAACC------------------------------------------------------------------------------------------------------------------------------------CAAATC-T-----TA------TTAATTACT-AATTGCAGCCGATGGCAGTCGCACATTTACGGCCAACTGCGTCAATGGCATTCAGGCC
droWil2	scf2_1100000004963:2478164-2478331 -		CTTTAAACCTTTGATTGTTTCCAATGTCCTCAGATCCATTCGATTGCTGTGTAAGTG-------------GAAAAAATT-GCCTC--------------------------------------CGAAGCAACTTCAAACTGTTA--------------------------------------------------------------------------------------------------------------TAAT-GACC-TTCTC--TTTTA-ATTTTCAGCCGATGGCAGTCGCACTTTCACCGCCAACTGTGTCAATGGCATTCAAGCC
dp5	XL_group1a:381244-381404 +		GTTCAAGCCCCTAATAGTGTCAAATGTGCTACGCTCTATTCGCCTGCTTTGTAAGTA----G--------AAGATCTTT-TTCCAATATTC--TGCTAATGCGAGTACGATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CCATTTCAGCTGACGGCAGTCGCACCTTCACCGCCAATTGCGTGAACGGCATCCAGGCC
droPer2	scaffold_26:283968-284131 -		GTTCAAGCCCCTAATAGTGTCAAATGTGCTACGCTCTATTCGCCTGCTTTGTAAGTA----G-----AAGGAGATCTTT-TTCCAATATTC--TGCTAATGCGAGTACGATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CCATTTCAGCTGACGGCAGTCGCACCTTCACCGCCAATTGCGTGAACGGCATCCAGGCC
droAna3	scaffold_13117:4331242-4331399 +		GTTCAAGCCCCTGATTGTTTCCAATGTCCTGCGTTCCATTCGATTGCTATGTAGGTT-------------CTTGTTCCT-TTGTA----------TTCTTGAGCC------A------------------------------------------------------------------------------------------------------------------------TTAAT--------C-----------T-GATT------TTGAAT-CCCTTCCAGCTGATGGCAGCCGCACCTTCACCGCCAACTGCGTCAACGGCATCCAGGCC
droBip1	scf7180000396383:75005-75157 -		GTTCAAGCCTCTGATTGTCTCCAATGTCCTGCGTTCCATCCGGCTGCTCTGTAGGTC----T---------TTGT-AAT-CCTTA----------TTGT--GGCC------A------------------------------------------------------------------------------------------------------------------------TT-----------C-----------TGAT-T-----GTACGAT-CCCTTCCAGCTGATGGCAGCCGCACCTTCACCGCCAACTGCGTCAACGGCATCCAGGCC
droKik1	scf7180000302544:713569-713768 -		CTTCAAGCCGCTGATTGTGTCCAATGTGCTGCGCTCCATCCGGCTGCTGTGTAAGTACCATT---------A-AAGGTG-GCCT----------------------------------------------------------------GTCGGAGGAGCAAACTCCTGCCCA------------------------------------GAGTGGTTCTCAGTTCTTTAGTTATTTAC--------C---A---------AACTCT-GCC--TGCT-CCTTTCCAGCCGATGGCAGCCGCACCTTCACTGCCAACTGCGTGAACGGCATCCAGGCG
droFic1	scf7180000454072:840451-840656 -		GTTCAAGCCCTTGATCGTGTCCAATGTGCTGCGCTCAATCCGGCTGTTGTGTAAGTT----T--------AAAATGGG---ATTC--------------------------------------CAAAGTTGCTTGCAACCGATCCAGCAGC--------------TTATGCAACTT------------------------------------------ATG-TGATTATTTCATGAATGTTGAGCA---A-AG-A----AATC-T--------GC-CTTTTTCAGCTGACGGCAGCAGGACCTTCACTGCCAACTGCGTCAACGGAATCCAGGCG
droEle1	scf7180000491186:3256473-3256572 -		TTTCGTGCCGATGATCGCCTCGAATGTCCTGCGCTCCATCACCCTGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGATGGCATGAAGTCCTTCTGCATCCACTGCCTGGAGGGCCTCGAACCG
droRho1	scf7180000776942:153319-153566 +		GTTCAAACCTTTGATTGTGTCCAATGTGCTGCGCTCCATTCGGCTGTTGTGTAAGTT----T---------AACGAATAG-T-----------------------------------TTA-----------------AGCGATGCAGTGGCAGCGGAAAAAGCTTTTATGCATTTTTAAGAAACAGCGACTGCCGCTGCATCGCTTACAATTAGTTCCAAG-TATTTATTTATTGACAGTCAAGTA---A-TA-A----AACC-T---------T-TTCTTTCAGCTGATGGCAGCAGGACTTTTACTGCCAACTGCGTGAACGGAATCCAGGCT
droBia1	scf7180000301760:2823736-2823896 -		GTTCAAGCCCCTCATCGTGTCCAACGTGCTGCGCTCCATTCGGCTGTTGTGTAAGCT----TGGGAGGCGAAGGG------CTTA--------------------------------------TCAAGAGGCTTCCAA-------------------------------G------------------------------------------------------------------------------------TAAC-TATC-T--------TC-CCTTTGCAGCTGATGGCAGCCGGACCTTCACTGCCAACTGCGTGAATGGCATCCAGGCC
droTak1	scf7180000413955:28976-29134 +		CTTTAAGCCTTTGATTGTGTCCAATGTGCTGCGCTCCATTCGGCTGTTGTGTAAGCT----T-------------------GGCTTTAGCCTGTCTATCTGTATC-GG-------------------------------------------------------------------------------------------------------------------------------------------TTATA-T-----AT------TATATTATA-TTTTTCAGCTGATGGCAGCCGTACCTTCACTGCCAACTGCGTGAACGGCATCCAGGCC
droEug1	scf7180000409522:246761-246918 +		TTTCAAGCCTCTGATCGTGTCCAATGTGCTGCGCTCCATTCGTTTGTTGTGTAAGTT----T---------AAAAGATAA-T------------GTTGTTGT-------------------------------------------------------------------------------------------------------------------------------TTATTTGC--------A---A-AG-TAAT-GACC-T--------TT-CCTCTTTAGCTGACGGCAGCAGGACCTTCACTGCCAACTGCGTGAACGGAATCCAGGCC
dm3	chrX:6575356-6575519 +		ATTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTGTAAGCT-------------A----------CCTATTACCCACCCTTGGTGGAAC-GCCAAATCAATCG--------------------------------------------------------------------------------------------------------------------------------------------AA------TCTATTCCT-TTTTGTAGCTGATGGCAGCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCG
droSim2	x:6178462-6178633 +		ATTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTGTAAGCT-------------ATGACGATT-ACCTATTACCC--CGCTGTTGGGCATGCCAAATCAACCG--------------------------------------------------------------------------------------------------------------------------------------------AA------TCTTTTCCT-TTTTGCAGCTGATGGTAGCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCG
droSec2	scaffold_4:229054-229225 -		ATTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTGTAAGCT-------------ATGACGATT-ACCTACTACCC--CGCTGTTGGGCCTGCCAAATCAATCG--------------------------------------------------------------------------------------------------------------------------------------------AA------TCTTTTCCT-TTTTGCAGCTGATGGCAGCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCG
droYak3	X:2538901-2539065 +		CTTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTGTTGTGTAAGCT-------------ATCCACACG-ACTTA----------TTGTTGCGCCA------------------------------------------------------------------------------------------------------------------------------CCAAT--------CGAAA-T-CAATTGAA---------ATTTCT-GTTTGCAGCTGATGGCAGCAGGACCTTCACTGCCAACTGCGTGAATGGCATCCAGGCC
droEre2	scaffold_4690:15502538-15502698 +		CTTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCTATTCGGCTGTTGTGTAAGCT-------------ATGAGGATTTACTTA----------TTGTTTGGCCT-CCAAATCAATAC--------------------------------------------------------------------------------------------------------------------------------------------AATC-G--------TC-TCTTTGCAGCTGACGGCAGCAGGACCTTCACGGCCAACTGCGTCAATGGCATCCAGGCC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

CTTCAAGCCATTGATTGTGTCCAATGTGCTGCGCTCCATACGCCTGCTCTGTAAGTA-------------CT---C-TC-TTGCCACACTC--TCGCAATCTCTCTT-------------------------------------------------------------------------------------------------------------------------------------------TCAA-C-TGTTTGAT---------TTGTCG-ATTTGCAGCCGATGGCAGCCGCACCTTTACGGCAAACTGCGTGAATGGCATTCAGGCC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................................................................................................................................................................................................................................................................................GCACCTTTACGGCAAACTGCGTGAAT............	26	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TGCGTGAATGGCATTCAGGCC	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GTGTCCAATGTGCTGCGCTCCA.........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGCAAACTGCGTGAATGGC.........	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GTGTCCAATGTGCTGCGCTC...........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................GATGGCAGCCGCACCTTTACG...........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................GCGTGAATGGCATTCAGGCC	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................AGCCGCACCTTTACGGCAAACTGCGT................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TGGCAGCCGCACCTTTACGGC.........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................GGCAGCCGCACCTTTACGGCAAACTGC..................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........TTGATTGTGTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................ACGGCAAACTGCGTGAATGGCA........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CTTCAAGCCATTGATTGTGC...........................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATGTGCTGCGCTCCATACGCC...................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................CGCACCTTTACGGCAAACTGCGT................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGCAAACTGCGTGAATGGCATT......	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TGTGCTGCGCTCCATACGCCTGCTC..............................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GTCCAATGTGCTGCGCTCCATAC......................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................GCACCTTTACGGCAAACTGCGT................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................CCTTTACGGCAAACTGCGTGAA.............	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GTCCAATGTGCTGCGCTCCATACGCC...................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............TGTGTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................AACTGCGTGAATGGCATTCA....	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CAATGTGCTGCGCTCCATACGCCTGCT...............................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................AAACTGCGTGAATGGCATTCAG...	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................CAAACTGCGTGAATGGCATTCAGGC.	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TTTACGGCAAACTGCGTGAATGGCA........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GATTGTGTCCAATGTGCTGC...............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TCAAGCCATTGATTGTGTCCAATGT....................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CAATGTGCTGCGCTCCATAC......................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TTTACGGCAAACTGCGTGAA.............	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TTGTGTCCAATGTGCTGCGCTC...........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................CGATGGCAGCCGCACCTTTACGGCAAA......................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........TGATTGTGTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................ACGGCAAACTGCGTGAATGGCC........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................GCGTGAATGGCATTCAGGC.	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................TACGGCAAACTGCGTGAATGGCA........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GTTCAAGCCACTGATTGTCTCCAATGTGCTGCGCTCAATTCGTCTGCTCTGTAAGTA-------------AAGAA------------------------------------ATTAGTATAATCCGAAGCAGCTCTC-------------------------------ATCCAATTTT-------------------------------------------------TGTT----------------C----------------------CTTCTCA-TCTTGCAGCCGATGGTAGTCGAACCTTCACGGCCAACTGTGTCAATGGCATAAAGGCC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.........ACTGATTGTCTCCAATGTGCTGCGCT............................................................................................................................................................................................................................................................................................................	26	1	2.00	2	1	0	0	0	1	0
...................TCCAATGTGCTGCGCTCAATTCGTC...................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................CGATGGTAGTCGAACCTTCACGGC.........................	24	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................GATGGTAGTCGAACCTTCAC............................	20	1	1.00	1	1	0	0	0	0	0
GTTCAAGCCACTGATTGTCTCCAATG.....................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................CGATGGTAGTCGAACCTTCACGG..........................	23	1	1.00	1	1	0	0	0	0	0
................GTCTCCAATGTGCTGCGCTCAATT.......................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
....................CCAATGTGCTGCGCTCAATTCGT....................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................GTAGTCGAACCTTCACGGC.........................	19	1	1.00	1	1	0	0	0	0	0
...CAAGCCACTGATTGTCTCCAATG.....................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
GTTCAAGCCACTGATTGTCTCCAAT......................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.....AGCCACTGATTGTCTCCAATGTGCT.................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TAGTCGAACCTTCACGGC.........................	18	1	1.00	1	1	0	0	0	0	0

droGri2

GTTCAAGCCTTTGATTGTGTCCAATGTGCTGCGTTCCATCCGCCTACTCTGTAAGTA-------------GC-TTCACT-TGCCATCAGTC--TCCAATTCTCTCTCTCAAACC------------------------------------------------------------------------------------------------------------------------------------CAAATC-T-----TA------TTAATTACT-AATTGCAGCCGATGGCAGTCGCACATTTACGGCCAACTGCGTCAATGGCATTCAGGCC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...............TGTGTCCAATGTGCTGCGTTCCA.........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0

droWil2

CTTTAAACCTTTGATTGTTTCCAATGTCCTCAGATCCATTCGATTGCTGTGTAAGTG-------------GAAAAAATT-GCCTC--------------------------------------CGAAGCAACTTCAAACTGTTA--------------------------------------------------------------------------------------------------------------TAAT-GACC-TTCTC--TTTTA-ATTTTCAGCCGATGGCAGTCGCACTTTCACCGCCAACTGTGTCAATGGCATTCAAGCC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.......................................................................................................................................................................................................................................................................................................................AACTGTGTCAATGGCATTCAAGCC	24	1	3.00	3	0	0	0	2	1
.......................ATGTCCTCAGATCCATTCGATTGCT...............................................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0
.TTTAAACCTTTGATTGTTTCCAATG.....................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CTGTGTCAATGGCATTCAAGCC	22	1	2.00	2	0	0	0	2	0
............................CTCAGATCCATTCGATTGCT...............................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................CACCGCCAACTGTGTCAATGGCATT......	25	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................GATGGCAGTCGCACTTTCACC...........................	21	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................TTTCACCGCCAACTGTGTCAATGGC.........	25	1	1.00	1	0	1	0	0	0
...TAAACCTTTGATTGTTTCCAATGT....................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................CGCACTTTCACCGCCAACTGTGTC...............	24	1	1.00	1	0	0	0	1	0
..................TTCCAATGTCCTCAGATCCAT........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................CGCACTTTCACCGCCAACTGT..................	21	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................CACCGCCAACTGTGTCAATGGC.........	22	1	1.00	1	0	0	0	1	0
...............TGTTTCCAATGTCCTCAGA.............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..................TTCCAATGTCCTCAGATCCA.........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0
.........TTTGATTGTTTCCAATGTCCTCAGATC...........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TTCACCGCCAACTGTGTC...............	18	1	1.00	1	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCAGTCGCACTTTCACCGC.........................	19	1	1.00	1	0	1	0	0	0
................................GATCCATTCGATTGCTGTCCG..........................................................................................................................................................................................................................................................................................	21	3	0.33	1	1	0	0	0	0

dp5

GTTCAAGCCCCTAATAGTGTCAAATGTGCTACGCTCTATTCGCCTGCTTTGTAAGTA----G--------AAGATCTTT-TTCCAATATTC--TGCTAATGCGAGTACGATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CCATTTCAGCTGACGGCAGTCGCACCTTCACCGCCAATTGCGTGAACGGCATCCAGGCC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................GCGTGAACGGCATCCAGGCC	20	1	2.00	2	0	1	1	0	0	0	0	0	0	0
..................GTCAAATGTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	1	1	0	0	0	0	0	0	0
..................GTCAAATGTGCTACGCTCTA.........................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TGCGTGAACGGCATCCAGGC.	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................ATTGCGTGAACGGCATCCA....	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................CTGACGGCAGTCGCACCTT...............................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.TTCAAGCCCCTAATAGTGT...........................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................AATTGCGTGAACGGCATCCA....	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TTCACCGCCAATTGCGTGAACGGCA........	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
GTTCAAGCCCCTAATAGT.............................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............AGTGTCAAATGTGCTACGCTCTATTCGCC...................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................CGCCAATTGCGTGAACGGCATCCA....	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................CAAATGTGCTACGCTCTATTCGCCTG.................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................ATGTGCTACGCTCTATTCGCCTGCT...............................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................CCGCCAATTGCGTGAACGGCA........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................TGCGAGTACGATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CC.........................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................GTGTCAAATGTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.....AGCCCCTAATAGTGTCAAATG.....................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TGCGTGAACGGCATCCAGGCC	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
GTTCAAGCCCCTAATAGTGT...........................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................TGACGGCAGTCGCACCTTCACC...........................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........CCTAATAGTGTCAAATGTGCTACG..............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................ATTGCGTGAACGGCATCCAG...	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................ATTGCGTGAACGGCATCCAGGCC	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................AATGTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................CTGACGGCAGTCGCACCTTCA.............................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..................GTCAAATGTGCTACGCTCT..........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TTGCGTGAACGGCATCCA....	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................CACCGCCAATTGCGTGAACGG..........	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........TAATAGTGTCAAATGTGCT.................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................CGCCAATTGCGTGAACGGC.........	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................TGTCAAATGTGCTACGCTCTATT.......................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TTGCGTGAACGGCATCCAG...	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GTTCAAGCCCCTAATAGTGTCAAATGTGCTACGCTCTATTCGCCTGCTTTGTAAGTA----G-----AAGGAGATCTTT-TTCCAATATTC--TGCTAATGCGAGTACGATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CCATTTCAGCTGACGGCAGTCGCACCTTCACCGCCAATTGCGTGAACGGCATCCAGGCC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................................................................................................................................................................................................................................................CAATTGCGTGAACGGCATCCA....	21	1	3.00	3	3	0	0	0	0	0
....................CAAATGTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0
.......................ATGTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	22	1	3.00	3	3	0	0	0	0	0
........................TGTGCTACGCTCTATTCGCC...................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................AGTCGCACCTTCACCGCCA.......................	19	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................CTGACGGCAGTCGCACCTT...............................	19	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................CACCGCCAATTGCGTGAACGGC.........	22	1	1.00	1	0	0	1	0	0	0
...............AGTGTCAAATGTGCTACGCTC...........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................CGCCAATTGCGTGAACGG..........	18	1	1.00	1	0	1	0	0	0	0
GTTCAAGCCCCTAATAGTGT...........................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
.........................GTGCTACGCTCTATTCGCCC..................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.........................GTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..................GTCAAATGTGCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................CGTGAACGGCATCCAGGCC	19	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................ATTGCGTGAACGGCATCCA....	19	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................ATTGCGTGAACGGCATCCAGGCC	23	1	1.00	1	0	1	0	0	0	0
...........................GCTACGCTCTATTCGCCT..................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0

droAna3

GTTCAAGCCCCTGATTGTTTCCAATGTCCTGCGTTCCATTCGATTGCTATGTAGGTT-------------CTTGTTCCT-TTGTA----------TTCTTGAGCC------A------------------------------------------------------------------------------------------------------------------------TTAAT--------C-----------T-GATT------TTGAAT-CCCTTCCAGCTGATGGCAGCCGCACCTTCACCGCCAACTGCGTCAACGGCATCCAGGCC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.......................ATGTCCTGCGTTCCATTCGATTGCT...............................................................................................................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	4
.....AGCCCCTGATTGTTTCCA........................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................AGCCGCACCTTCACCGCCAACTGCGT................	26	1	2.00	2	0	0	0	0	0	2
....................CCAATGTCCTGCGTTCCATTC......................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
................GTTTCCAATGTCCTGCGTTCCATT.......................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.....AGCCCCTGATTGTTTCCAATGTCC..................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................TCACCGCCAACTGCGTCAACGG..........	22	1	1.00	1	0	1	0	0	0	0
................GTTTCCAATGTCCTGCGT.............................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
......................AATGTCCTGCGTTCCATTCGATT..................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
.....AGCCCCTGATTGTTTCCAATGTC...................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................................ACTGCGTCAACGGCATCCAGGCC	23	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................GCACCTTCACCGCCAACTGCGTCAACGGC.........	29	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................CCGCCAACTGCGTCAACGGC.........	20	1	1.00	1	1	0	0	0	0	0
..............TTGTTTCCAATGTCCTGCGTTCCATTC......................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.....AGCCCCTGATTGTTTCCAA.......................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCAGCCGCACCTTCACCGCCAAC.....................	23	1	1.00	1	1	0	0	0	0	0
.................TTTCCAATGTCCTGCGTTCC..........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................AACTGCGTCAACGGCATCCAG...	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................CAACTGCGTCAACGGCATCCAGGC.	24	1	1.00	1	0	1	0	0	0	0
GTTCAAGCCCCTGATTGTTTCCA........................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CACCTTCACCGCCAACTGCGT................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................CGCCAACTGCGTCAACGGCATCCAGGC.	27	1	1.00	1	0	0	0	0	1	0

droBip1

GTTCAAGCCTCTGATTGTCTCCAATGTCCTGCGTTCCATCCGGCTGCTCTGTAGGTC----T---------TTGT-AAT-CCTTA----------TTGT--GGCC------A------------------------------------------------------------------------------------------------------------------------TT-----------C-----------TGAT-T-----GTACGAT-CCCTTCCAGCTGATGGCAGCCGCACCTTCACCGCCAACTGCGTCAACGGCATCCAGGCC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CTTCAAGCCGCTGATTGTGTCCAATGTGCTGCGCTCCATCCGGCTGCTGTGTAAGTACCATT---------A-AAGGTG-GCCT----------------------------------------------------------------GTCGGAGGAGCAAACTCCTGCCCA------------------------------------GAGTGGTTCTCAGTTCTTTAGTTATTTAC--------C---A---------AACTCT-GCC--TGCT-CCTTTCCAGCCGATGGCAGCCGCACCTTCACTGCCAACTGCGTGAACGGCATCCAGGCG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GTTCAAGCCCTTGATCGTGTCCAATGTGCTGCGCTCAATCCGGCTGTTGTGTAAGTT----T--------AAAATGGG---ATTC--------------------------------------CAAAGTTGCTTGCAACCGATCCAGCAGC--------------TTATGCAACTT------------------------------------------ATG-TGATTATTTCATGAATGTTGAGCA---A-AG-A----AATC-T--------GC-CTTTTTCAGCTGACGGCAGCAGGACCTTCACTGCCAACTGCGTCAACGGAATCCAGGCG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTTCGTGCCGATGATCGCCTCGAATGTCCTGCGCTCCATCACCCTGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGATGGCATGAAGTCCTTCTGCATCCACTGCCTGGAGGGCCTCGAACCG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GTTCAAACCTTTGATTGTGTCCAATGTGCTGCGCTCCATTCGGCTGTTGTGTAAGTT----T---------AACGAATAG-T-----------------------------------TTA-----------------AGCGATGCAGTGGCAGCGGAAAAAGCTTTTATGCATTTTTAAGAAACAGCGACTGCCGCTGCATCGCTTACAATTAGTTCCAAG-TATTTATTTATTGACAGTCAAGTA---A-TA-A----AACC-T---------T-TTCTTTCAGCTGATGGCAGCAGGACTTTTACTGCCAACTGCGTGAACGGAATCCAGGCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GTTCAAGCCCCTCATCGTGTCCAACGTGCTGCGCTCCATTCGGCTGTTGTGTAAGCT----TGGGAGGCGAAGGG------CTTA--------------------------------------TCAAGAGGCTTCCAA-------------------------------G------------------------------------------------------------------------------------TAAC-TATC-T--------TC-CCTTTGCAGCTGATGGCAGCCGGACCTTCACTGCCAACTGCGTGAATGGCATCCAGGCC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CTTTAAGCCTTTGATTGTGTCCAATGTGCTGCGCTCCATTCGGCTGTTGTGTAAGCT----T-------------------GGCTTTAGCCTGTCTATCTGTATC-GG-------------------------------------------------------------------------------------------------------------------------------------------TTATA-T-----AT------TATATTATA-TTTTTCAGCTGATGGCAGCCGTACCTTCACTGCCAACTGCGTGAACGGCATCCAGGCC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TTTCAAGCCTCTGATCGTGTCCAATGTGCTGCGCTCCATTCGTTTGTTGTGTAAGTT----T---------AAAAGATAA-T------------GTTGTTGT-------------------------------------------------------------------------------------------------------------------------------TTATTTGC--------A---A-AG-TAAT-GACC-T--------TT-CCTCTTTAGCTGACGGCAGCAGGACCTTCACTGCCAACTGCGTGAACGGAATCCAGGCC	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTGTAAGCT-------------A----------CCTATTACCCACCCTTGGTGGAAC-GCCAAATCAATCG--------------------------------------------------------------------------------------------------------------------------------------------AA------TCTATTCCT-TTTTGTAGCTGATGGCAGCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........CCTGATCGTGTCCAATGTGCTGCGCTCCA.........................................................................................................................................................................................................................................................................................................	29	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TCAAGCCCCTGATCGTGTCCAATGTGC..................................................................................................................................................................................................................................................................................................................	27	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0
.....AGCCCCTGATCGTGTCCA........................................................................................................................................................................................................................................................................................................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TCAAGCCCCTGATCGTGTCCA........................................................................................................................................................................................................................................................................................................................	21	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CAATGTGCTGCGCTCCATTCGGC...................................................................................................................................................................................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................CCTTCACTGCCAACTGTGTGAATGGCA........	27	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GCCCCTGATCGTGTCCAATGTGCT.................................................................................................................................................................................................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................ATGTGCTGCGCTCCATTC......................................................................................................................................................................................................................................................................................................	18	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TCGTGTCCAATGTGCTGCGCTCCATT.......................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............CGTGTCCAATGTGCTGCGCTCCAT........................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TCGTGTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CCAATGTGCTGCGCTCCA.........................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TGTGTGAATGGCATC......	15	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CCAATGTGCTGCGCTCCATT.......................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TCGTGTCCAATGTGCTGCGCTCCA.........................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

ATTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTGTAAGCT-------------ATGACGATT-ACCTATTACCC--CGCTGTTGGGCATGCCAAATCAACCG--------------------------------------------------------------------------------------------------------------------------------------------AA------TCTTTTCCT-TTTTGCAGCTGATGGTAGCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
......................................................................................................................................................................................................................................................................................................................CAACTGTGTGAATGGCATCC.....	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................GTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................CAACTGTGTGAATGGCATCCAGG..	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AAGCCCCTGATCGTGTCCAATG.....................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

ATTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTGTAAGCT-------------ATGACGATT-ACCTACTACCC--CGCTGTTGGGCCTGCCAAATCAATCG--------------------------------------------------------------------------------------------------------------------------------------------AA------TCTTTTCCT-TTTTGCAGCTGATGGCAGCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
ATTCAAGCCCCTGATCGTGTC..........................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	1	0
..................................................................................................................................................................................................................................................................................................................CTGCCAACTGTGTGAATGG..........	19	1	2.00	2	0	0	2	0
...........................................................................................................................................................................................................................................................................................................ACCTTCACTGCCAACTGT..................	18	1	1.00	1	0	0	1	0
.TTCAAGCCCCTGATCGTGTCCA........................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
.................TGTCCAATGTGCTGCGCTCCATTCGGC...................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0
ATTCAAGCCCCTGATCGTGTCCAATGTGC..................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................................................................................................................................ACTGTGTGAATGGCATCCAGGC.	22	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................TTCACTGCCAACTGTGTGAATGGCATCC.....	28	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................CTGCCAACTGTGTGAATGGCATCCAGG..	27	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................CTGCCAACTGTGTGAATGGC.........	20	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................GCAGGACCTTCACTGCCAACT....................	21	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................................................................................................................................AGCAGGACCTTCACTGCCAACTGTGT................	26	1	1.00	1	0	1	0	0
.....AGCCCCTGATCGTGTCCAATGTG...................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................ACTGTGTGAATGGCATCCA....	19	1	1.00	1	0	1	0	0
ATTCAAGCCCCTGATCGTGTCCA........................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
............GATCGTGTCCAATGTGCT.................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
........................TGTGCTGCGCTCCATTCG.....................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	1	0
.....................CAATGTGCTGCGCTCCATTCG.....................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	1	0
......................AATGTGCTGCGCTCCATTC......................................................................................................................................................................................................................................................................................................	19	2	0.50	1	1	0	0	0

droYak3

CTTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTGTTGTGTAAGCT-------------ATCCACACG-ACTTA----------TTGTTGCGCCA------------------------------------------------------------------------------------------------------------------------------CCAAT--------CGAAA-T-CAATTGAA---------ATTTCT-GTTTGCAGCTGATGGCAGCAGGACCTTCACTGCCAACTGCGTGAATGGCATCCAGGCC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................................................................................................................................................................................................................................................................................................CAACTGCGTGAATGGCATCCAGGC.	24	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
..TCAAGCCCCTGATCGTGTCCAATGTGC..................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
CTTCAAGCCCCTGATCGTGTC..........................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................CTGATGGCAGCAGGACCTTCACT...........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................CCAATGTGCTGCGCTCCATTCGGCTGT................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................GTGCTGCGCTCCATTCGGCTGTT...............................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TGCGTGAATGGCATCCAGGCC	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CTGCGTGAATGGCATCCAGGC.	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................AGCAGGACCTTCACTGCCAACTGCGT................	26	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
CTTCAAGCCCCTGATCGTGTCCAATG.....................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................ATGTGCTGCGCTCCATTCGGCTGTTGTC............................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................GCAGGACCTTCACTGCCAACTGC..................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
CTTCAAGCCCCTGATCGT.............................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................GCAGGACCTTCACTGCCAACTGCGT................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAGGACCTTCACTGCCAACTGCGTGG..............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..TCAAGCCCCTGATCGTGTCCAAT......................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..........CTGATCGTGTCCAATGTGCTGCGCTCC..........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................GTCCAATGTGCTGCGCTC...........................................................................................................................................................................................................................................................................................................	18	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
......................AATGTGCTGCGCTCCATTCG.....................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

CTTCAAGCCCCTGATCGTGTCCAATGTGCTGCGCTCTATTCGGCTGTTGTGTAAGCT-------------ATGAGGATTTACTTA----------TTGTTTGGCCT-CCAAATCAATAC--------------------------------------------------------------------------------------------------------------------------------------------AATC-G--------TC-TCTTTGCAGCTGACGGCAGCAGGACCTTCACGGCCAACTGCGTCAATGGCATCCAGGCC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
............GATCGTGTCCAATGTGCTGC...............................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	1	1	0	0
...........................GCTGCGCTCTATTCGGCTGT................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................ACTGCGTCAATGGCATCCAG...	20	1	1.00	1	1	0	0	0	0	0	0
............GATCGTGTCCAATGTGCTGCGCTCTA.........................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAGGACCTTCACGGCCAACTGC..................	22	1	1.00	1	1	0	0	0	0	0	0
..................GTCCAATGTGCTGCGCTCTATTCGGCT..................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
.....AGCCCCTGATCGTGTCCAAT......................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...CAAGCCCCTGATCGTGTC..........................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
......GCCCCTGATCGTGTCCAATGTGCTG................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................GGACCTTCACGGCCAACTGCGT................	22	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................GACCTTCACGGCCAACTGCGTCAAT............	25	1	1.00	1	1	0	0	0	0	0	0
.........................GTGCTGCGCTCTATTCGGCTGTTGTC............................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AGGACCTTCACGGCCAACTGCGT................	23	1	1.00	1	1	0	0	0	0	0	0
...........TGATCGTGTCCAATGTGCTGC...............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
............GATCGTGTCCAATGTGCTG................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
.............................TGCGCTCTATTCGGCTGTTGTC............................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
......GCCCCTGATCGTGTCCAATGTGCTGC...............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................GCAGGACCTTCACGGCCAA......................	19	1	1.00	1	1	0	0	0	0	0	0
.........................GTGCTGCGCTCTATTCGG....................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
....AAGCCCCTGATCGTGTCCAATGTGC..................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................CTGACGGCAGCAGGACCTTCACGGC.........................	25	1	1.00	1	0	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................CCTTCACGGCCAACTGCGTCA..............	21	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................AACTGCGTCAATGGCATCCAG...	21	1	1.00	1	1	0	0	0	0	0	0
CTTCAAGCCCCTGATCGTGTC..........................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...........................GCTGCGCTCTATTCGGCTGTT...............................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
......................AATGTGCTGCGCTCTATTCGGCT..................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0

dvi_9073

scaffold_12928:6058382-6058445 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads