ID:

dvi_9067

 Coordinate:

scaffold_12928:6053774-6053843 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ16452-cds]; exon [dvir_GLEANR_16954:2]; CDS [Dvir\GJ16452-cds]; exon [dvir_GLEANR_16954:3]; intron [Dvir\GJ16452-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------##################################################
ATTATTATCCCTATGACTATCCCGAACACAAGCGCAACTTCAACGAGCCCGTAAGCGTCACAATTAAGGCATGCCAAGCACAGATTTGAATGCTCTGCTCTGCTCTTTGCTCTCTTTCAGATATCAGCGGATCACGATCTGTACAGCGAGGATCGCTACTCACAGCCGGA
**************************************************...((((........((((((.((..((((((....))..))))..))..))).))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060668
160x9_males_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 M028
head
 SRR060659
Argentina_testes_total
 SRR060670
9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
 SRR1106729
mixed whole adult body
 V047
embryo
 V053
head
 SRR060671
9x160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
..........................................................................................................................................CTGTACAGCGAGGATCGCT............. 19 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ATCACGATCTGTACAGCGAGGAT................. 23 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGAGGATCGCT............. 29 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGATCTGTACAGCGAGGAT................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ATATCAGCGGATCACGATC............................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCGGATCACGATCTGTAC.......................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGAGGA.................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCGGATCACGATCTGTACAGCGAGGAT................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................AGCGCAACTTCAACGAGCCCA....................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CTATCCCGAACACAAGCGC....................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCACGATCTGTACAGCGAGG................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CACGATCTGTACAGCGAGGATCGCTACT.......... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CATATCAGCGGATCACGATCTGTACA......................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAGCGGATCACGATCTGT............................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGCGCAACTTCAACGCGCCCA....................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GATCTGTACAGCGAGGATCG............... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGACTATCCCGAACCCCAGCGCT...................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................GAACACAAGCGCAACTTCAACGAGCCC........................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCACGATCTGTACAGCGAGGATCG............... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAGCGGATCACGATCTGTACA......................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATGACTATCCCGAACACAAGCGCA...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAGCGGATCACGATCTGTAC.......................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATCTGTACAGCGAGGATCGCTACTCA........ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................GTACAGCGAGGATCGCTAC........... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGAGGAT................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GATCACGATCTGTACAGC....................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CACGATCTGTACAGCGAGGATCG............... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGCGCAACTTCAACGAGCCC........................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............GACTATCCCGAACACAAGCGC....................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................ACGATCTGTACAGCGAGGATC................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGAG.................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TATGACTATCCCGAACACAAGCGCA...................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATCCCTATGACTATCCCGAACACAAGCG........................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................ACAGCGAGGATCGCTACTCAC....... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CTGTACAGCGAGGATCGCTACT.......... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGAGG................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TTATTATCCCTATGACTATCCC................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTATGACTATCCCGAACACAAGCGCAACT................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGAGGATC................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CACAAGCGCAACTTCAACGAGCC......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCTGTACAGCGAGGATCGCT............. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCACGATCTGTACAGCGA..................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CAGCGAGGATCGCTACTCAC....... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GATCACGATCTGTACAGCGAGGATCGCT............. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CGAGGATCGCTACTCACAGCC... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TCCCGAACACAAGCGCAACTTCAACG............................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................GAACACAAGCGCAACTTCAACGAGC.......................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ATCAGCGGATCTCGATCTGTACAGC....................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............ATGACTATCCCGAACACAAG.......................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.TGATTATCCCTATGACTATCCC................................................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GATCTGTACAGCGAGGATCGCTA............ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCAGCGGATCACGATCTGTA........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................GCAACTTAAACGATCCCGCA..................................................................................................................... 20 3 6 0.50 3 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................CCATATCAGCGGAACACGATC............................... 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GTACAAATTTGAATGCTCT.......................................................................... 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................ATTTGAAACCTCTGTTCTGC................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATCTGTTCAGCGGGCATCG............... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TAATAATAGGGATACTGATAGGGCTTGTGTTCGCGTTGAAGTTGCTCGGGCATTCGCAGTGTTAATTCCGTACGGTTCGTGTCTAAACTTACGAGACGAGACGAGAAACGAGAGAAAGTCTATAGTCGCCTAGTGCTAGACATGTCGCTCCTAGCGATGAGTGTCGGCCT
**************************************************...((((........((((((.((..((((((....))..))))..))..))).))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 SRR060687
9_0-2h_embryos_total
 SRR060671
9x160_males_carcasses_total
 M027
male body		 M047
female body
 GSM1528803
follicle cells		 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
................................................................................................................................................TCGCTCCTAGCGATGAGTGT...... 20 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................TCTATAGTCTCCTAGTACTA................................ 20 2 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................TAAGTCTATAGGTGCCTAGT.................................... 20 3 3 1.00 3 2 0 0 1 0 0 0 0
...................................................................................................................AAGTCTATAGGTGCCTAG..................................... 18 2 5 0.80 4 2 0 0 1 1 0 0 0
.................................................................................................................GTAAGTCTATAGGTGCCTAGT.................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................AAGTCTATAGGTGCCTAGT.................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................TCGCCAAGTGCAAGTCATG.......................... 19 3 7 0.14 1 0 1 0 0 0 0 0 0
.................................................................................................................................................GGTTCCTAGCGATGAGTG....... 18 2 7 0.14 1 0 0 0 0 0 1 0 0
.................................CGTTGTAGTTGCTTGGGC....................................................................................................................... 18 2 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................AAGCCTATAGGTGCCTAGT.................................... 19 3 13 0.08 1 0 0 0 0 1 0 0 0
..................................................................................................................AAAGCCTATAGGTGCCTAG..................................... 19 3 13 0.08 1 0 0 0 0 0 0 1 0
..................................................................................................................................................ACTCCTAGCGATGAGTAC...... 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:6053724-6053893 - dvi_9067 ATTATTATCCCTATGACTATCCCGAACACAAGCGCAACTTCAACGAGCCCGTAAGCGTCA------CAATTAAGG----------CAT---G------CC---------AAGCACAGA-TT-TGAATGCT-----C----------TGCT-CTGCTCTTTGCTCTCTTTCAGATATCAGCGGATCACGATCTGTACAGCGAGGATCGCTACTCACAGCCGGA
droMoj3 scaffold_6359:4415376-4415534 - ACTACTATCCTTATGACTATCCGGAGATCAAACGCAATTTTAATGAGCCAGTAAGTTTGA------TTAGTTCAAG----------------------CTAAA------CAACATAGA----TTATAT---------AG------CTGTA-TAT---------CTTTGTTAGATTTCAGCGGATCATGATTTGTACAGCGAAGATCGCTACTCGCAGCCCGA
droGri2 scaffold_14853:5027218-5027386 - GCTACTATCCCTATGATTATCCCGAGCACAAGCGCAACTTGCACGAGCCAGTGAGTTAAT------GCATCTACGCC-------------G-CA---ACTATA------CAATATTAA----TA-----TGATGTTTTG-----G-TGTGGTTT---------ACTTAATAGATTTCAGCGGATATTGATTTGTATAGCGAGGATCGATTCTCGCAGCCGGA
droWil2 scf2_1100000004963:2481725-2481885 + CTTACTATCCATGGGATTTCCCCGAGCATAAGCGTAATTTGCATGAACCCGTAAGTTTCA------TTGATACAA----------CAA---TCT-------------------ATTG-----TGAAAT-TAGCTAAATG-------TTTG-CTT---------TCTGTTTAGGTCTCAGTAGATCATGATTTATATGGCGAGGATCGTTATTCACAGGCAGA
dp5 XL_group1a:376830-376994 - GCTACTATCCCTGGGATTATCCCGAGCACAAACGCAACCTCCACGAGCCCGTGAGTAGTC------ACAGTA----------------------------ACATGA---AAACATTGA----TAAAATCT-----A----------TATA-TTTCCCTTTTTCCTTTTCCAGATCTCGGCGGATCATGACTTGTATAGCGAAGACCGCTACTCACAGGCCGA
droPer2 scaffold_26:288574-288738 + GCTACTATCCCTGGGATTATCCCGAGCACAAGCGCAACCTCCACGAGCCCGTGAGTAGTC------ACAGTA----------------------------ACATGA---AAACATTGA----TAAAATCT-----A----------TATA-TTTCCCTTTTTCCTTTTCCAGATCTCGGCGGATCATGACTTGTATAGCGAAGACCGCTACTCACAGGCCGA
droAna3 scaffold_13117:4327417-4327579 - ATTACTATCCCTGGGACTATCCCGAGCACAAGCGCAACCTGCACGAGCCTGTGAGTGGCT------GTAGCACCA----------------------------AGA---TACCACCTT----TGAAAC-TAATATTATG-----GCAATC-T-----------TTCGTTTAGATCTCGGCGAATCATGATCTGTACAGCGAGGATCGCTACTCCCAGGCTGA
droBip1 scf7180000396383:78648-78810 + ACTACTACCCCTGGGACTACCCCGAGCACAAGCGCAACCTGCACGAGCCTGTGAGTGTCT------GAATCTTCGG--A-----ATAT---CTC-------------------CTTT-----TGTAAC-TAACTTTCT--------GGCA-CTT---------TTGGTTTAGATCTCGGCGAATCACGATCTGTACAGCGAGGATCGCTACTCCCAGGCCGA
droKik1 scf7180000302544:717505-717660 + ACTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAGCACGAGCCGGTAAGTAAGC------C-----ATGG--A-----A--CC-CCT----------TGA---T-CCAGC-------------TACTAAA-CG-------AGTA-TTT---------TTCTGGTAGATCTCGGCGGATCACGATCTGTACAGCGAGGATCGCTACTCGCAGGCGGA
droFic1 scf7180000454072:845785-845947 + CCTACTACCCCTGGGATTATCCGGAGCACAAGCGCAATCATCACGAGCCCGTAAGAGGACTACCC---------------A--A-T---AGTTA---TCTTCATGAG---G----------------ACC-----G----------CTTA-AATCCATTAAATCTCTTGTAGGTCTCGGCGGATCACGATCTTTACAGCGAGGATCGCTGGTCGCAGGCGGA
droEle1 scf7180000491044:463227-463394 - ACTACTATCCCTGGGACTATCCGGAGCACAAGCGTAATCACCACGAGCCCGTAAGTGGATCACTAC------------GCATG--C----TTCT---ATGCCATAAATA------------------CCC----AA-AGA---AT-------ATCGCTTTCGCCATCTGCAGATCTCGGCGGATCACGATCTGTACAGTGAGGATCGCTGGTCGCAGGCAGA
droRho1 scf7180000776942:148471-148635 - GCTACTATCCCTGGGATTATCCGGAGCACAAGCGTAATCAGCACGAGCCCGTAAGAGGATCACTC---------------ACA--T----CTCT---GTCCCATAGATA------------------TCCA----A-AGATACAT-------A---CTTTTTCCACCCGCAGATCTCGGCGGATCACGATCTGTACAGCGAAGATCGCTGGTCGCAGGCGGA
droBia1 scf7180000301760:2828236-2828401 + ACTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCACCACGAGCCCGTAAGCGGATTACCAG------------G-----CT---AACTA---GCTCCATAGAGC------------------CCCATTCAA-TG---CAC-TCTG-TTT---------CCCCCGCAGATCTCGGCGGATCACGATCTGTACAGCGAGGACCGCTGGTCGCAGGCGGA
droTak1 scf7180000413955:23706-23874 - ACTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAGCACGAGCCGGTAAGGGGATC-----GGATCTACGG--G-----CT----TTCA---GCTCTAAAAATA------------------CCTAATAAATTG--------G--------AATTCCCCCTTCGTAGATCTCTGCCAATCACGATCTGTACAGCGAGGATCGCTACTCGCAGGCGGA
droEug1 scf7180000409522:242711-242872 - CCTACTATCCCTGGGATTATCCGGAGCACAAGCGTAATCTTCACGAGCCCGTAAGATCAC------CCAGCTC-----------------CTTA---GTTTCATAGATA-----TCTA----TAATACA---------------TATGTA-TTT---------CGACTCTAGATCTCAGCTGATCACGATCTGTACAGCGAGGACCGTTGGTCGCAGGCCGA
dm3 chrX:6571559-6571734 - CGTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAACACGAGCCCGTAAGCGCCA------ACATCAACGGCT--A--G-C---AG-CAGCTGCTGCATAA---AAAAA---GAGT-CAAACCCTG----A----------TCCA-TTT---------CCATTGCAGATCTCGGCGGATCATGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGA
droSim2 x:6174729-6174899 - CATACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAACACGAGCCCGTAAGCCCCA------ACAGCACCAGCT--A--G-C---AG-CT---GCTGCATGA---AAA-----GAGT-CAAAACCTG----A----------TGCA-TTT---------CCATTGCAGATTTCGGCGGATCATGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGA
droSec2 scaffold_4:232799-232969 + CATACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAACACGAGCCCGTAAGCCCGA------ACAGCACCAGCT--A--G-C---AG-CA---GCTGCATGA---AAA-----GAGT-CAAACCCTG----A----------TGCA-TTT---------CCATTGCAGATTTCGGCGGATCATGATTTGTACAGCGAGGATCGCTGGTCGCAGGCCGA
droYak3 X:2535008-2535174 - CGTATTATCCCTGGGATTATCCGGAGCACAAGCGCAACCACCACGAGCCCGTATGTGCCTA-----ACACCAGCAG--A-----TT---AGTTA---GCTTCACAAC-A-----TCTA--------GCCTA----A----------TTCA-TTC--------TCATTTCTAGATCTCGGCGGATCATGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGA
droEre2 scaffold_4690:15498475-15498645 - CGTACTATCCCTGGGATTATCCGGAGCACAAGCGAAACCACCACGAGCCCGTAAGTGCCA------GCAACATCAGCT-----------AGTTG---GCTTCAAAA------AATCGA-ATCTAAAACCTA----A----------TATA-TTT---------CGATTGTAGATCTCGGCGGATCACGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATTATTATCCCTATGACTATCCCGAACACAAGCGCAACTTCAACGAGCCCGTAAGCGTCA------CAATTAAGG----------CAT---G------CC---------AAGCACAGA-TT-TGAATGCT-----C----------TGCT-CTGCTCTTTGCTCTCTTTCAGATATCAGCGGATCACGATCTGTACAGCGAGGATCGCTACTCACAGCCGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................CTGTACAGCGAGGATCGCT.............1914.004000000000000000000000000000000000000000000000000000000000000004
......................................................................................................................................................................................ATCACGATCTGTACAGCGAGGAT.................2312.002000200000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAGGATCGCT.............2912.002000000000100000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CGATCTGTACAGCGAGGAT.................1911.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATATCAGCGGATCACGATC...............................1911.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCGGATCACGATCTGTAC..........................1911.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAGGA..................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCGGATCACGATCTGTACAGCGAGGAT.................2811.001000000000000000000000000000000000000000000000000000000000100000
..............................AGCGCAACTTCAACGAGCCCA...........................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................CTATCCCGAACACAAGCGC...........................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TCACGATCTGTACAGCGAGG...................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................CACGATCTGTACAGCGAGGATCGCTACT..........2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAGCGGATCACGATCTGT............................1811.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................GATCTGTACAGCGAGGATCG...............2011.001000000000000000010000000000000000000000000000000000000000000000
.......................GAACACAAGCGCAACTTCAACGAGCCC............................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................TCACGATCTGTACAGCGAGGATCG...............2411.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................CAGCGGATCACGATCTGTACA.........................2111.001000000000000000001000000000000000000000000000000000000000000000
............ATGACTATCCCGAACACAAGCGCA..........................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAGCGGATCACGATCTGTAC..........................2011.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATCTGTACAGCGAGGATCGCTACTCA........2611.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................GTACAGCGAGGATCGCTAC...........1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAGGAT.................2511.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................GATCACGATCTGTACAGC.......................1811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CACGATCTGTACAGCGAGGATCG...............2311.001000000000000000001000000000000000000000000000000000000000000000
..............................AGCGCAACTTCAACGAGCCC............................................................................................................................................................................2011.001000000000000000000000000000100000000000000000000000000000000000
..............GACTATCCCGAACACAAGCGC...........................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................ACGATCTGTACAGCGAGGATC................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAG....................2211.001000000000000000010000000000000000000000000000000000000000000000
...........TATGACTATCCCGAACACAAGCGCA..........................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
......ATCCCTATGACTATCCCGAACACAAGCG............................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ACAGCGAGGATCGCTACTCAC.......2111.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................CTGTACAGCGAGGATCGCTACT..........2211.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAGG...................2311.001001000000000000000000000000000000000000000000000000000000000000
.TTATTATCCCTATGACTATCCC.......................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..........CTATGACTATCCCGAACACAAGCGCAACT.......................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAGGATC................2611.001000100000000000000000000000000000000000000000000000000000000000
..........................CACAAGCGCAACTTCAACGAGCC.............................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCGCT.............2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGA.....................2111.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................CAGCGAGGATCGCTACTCAC.......2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GATCACGATCTGTACAGCGAGGATCGCT.............2811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CGAGGATCGCTACTCACAGCC...2111.001000000000000000001000000000000000000000000000000000000000000000
...................TCCCGAACACAAGCGCAACTTCAACG.................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
.......................GAACACAAGCGCAACTTCAACGAGC..............................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
............ATGACTATCCCGAACACAAG..............................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................GATCTGTACAGCGAGGATCGCTA............2311.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................TCAGCGGATCACGATCTGTA...........................2011.001000000000000000000000000000000000000000000000000000000000000100
droMoj3
ACTACTATCCTTATGACTATCCGGAGATCAAACGCAATTTTAATGAGCCAGTAAGTTTGA------TTAGTTCAAG----------------------CTAAA------CAACATAGA----TTATAT---------AG------CTGTA-TAT---------CTTTGTTAGATTTCAGCGGATCATGATTTGTACAGCGAAGATCGCTACTCGCAGCCCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................TTTCAGCGGATCATGATTTGTACA.........................2412.002000020
.......................................................................................................................................................................................................GAAGATCGCTACTCGCAGCC...2011.001100000
.....................................................................................................................................................................................................GCGAAGATCGCTACTCGCAGCCC..2311.001100000
..........................................................................................................................................................................................TGATTTGTACAGCGAAGATCGCTACTC.........2711.001100000
ACTACTATCCTTATGACTATCCGGAG....................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................AGCGGATCATGATTTGTACA.........................2011.001000010
.........................GATCAAACGCAATTTTAATGAGC..............................................................................................................................................................................2311.001100000
........................................................................................................................................................................................CATGATTTGTACAGCGAAGAT.................2111.001100000
..........................................................................................................................................................................................TGATTTGTACAGCGAAGATCGCT.............2311.001100000
.............................AAACGCAATTTTAATGAGCCA............................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................CAGCGAAGATCGCTACTCGCAGC....2311.001100000
droGri2
GCTACTATCCCTATGATTATCCCGAGCACAAGCGCAACTTGCACGAGCCAGTGAGTTAAT------GCATCTACGCC-------------G-CA---ACTATA------CAATATTAA----TA-----TGATGTTTTG-----G-TGTGGTTT---------ACTTAATAGATTTCAGCGGATATTGATTTGTATAGCGAGGATCGATTCTCGCAGCCGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................TCAGCGGATATTGATTTGT............................1911.00101
droWil2
CTTACTATCCATGGGATTTCCCCGAGCATAAGCGTAATTTGCATGAACCCGTAAGTTTCA------TTGATACAA----------CAA---TCT-------------------ATTG-----TGAAAT-TAGCTAAATG-------TTTG-CTT---------TCTGTTTAGGTCTCAGTAGATCATGATTTATATGGCGAGGATCGTTATTCACAGGCAGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................GATCATGATTTATATGGC.......................1813.00311010
..........................................................................................................................................................................................TGATTTATATGGCGAGGATCGTTATTCAC.......2912.00220000
......ATCCATGGGATTTCCCCGAGC...................................................................................................................................................................................................2112.00200020
.......................................................................................................................................................................................................GAGGATCGTTATTCACAGGCAGA2312.00200110
..................................................................................................................................................................................................ATGGCGAGGATCGTTATTCACAGGC...2511.00100010
.........................................................................................................................................................................................ATGATTTATATGGCGAGGATC................2111.00100010
......................................................................................................................................................................................ATCATGATTTATATGGCGAGG...................2111.00101000
.....................................................................................................................................................................................GATCATGATTTATATGGCGAG....................2111.00100010
.................................GTAATTTGCATGAACCCGTC.........................................................................................................................................................................2011.00100100
.....................CCGAGCATAAGCGTAATTTGCA...................................................................................................................................................................................2211.00100010
..................................................................................................................................................................................GTAGATCATGATTTATATGGCGAGGATC................2811.00110000
.........................................................................................................................................................................................ATGATTTATATGGCGAGGAT.................2011.00100010
.............................................................................................................................................................................................TTTATATGGCGAGGATCGTTATTCACA......2711.00101000
........CCATGGGATTTCCCCGAGCATAAGC.............................................................................................................................................................................................2511.00100100
........................................................................................................................................................................................CATGATTTATATGGCGAGG...................1911.00100010
...........TGGGATTTCCCCGAGCATAAGC.............................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................GTAGATCATGATTTATATGGCGAGGAT.................2711.00100100
................................................................................................................................................................................CAGTAGATCATGATTTATATGGCGAGG...................2711.00110000
.............................................................................................................................................................................................TTTATATGGCGAGGATCGTTATT..........2311.00100010
..............GATTTCCCCGAGCATAAGCGTAATTTG.....................................................................................................................................................................................2711.00100010
...........................................................................................................................................................................................GATTTATATGGCGAGGATC................1911.00100100
.......................................................................................................................................................................................................GAGGATCGTTATTCACAGGCA..2111.00100100
..................................................................................................................................................................................GTAGATCATGATTTATATGGC.......................2111.00110000
..............................................................................................................................................................................................TTATATGGCGAGGATCGTTATTCA........2411.00110000
............................................................................................................................................................................................ATTTATATGGCGAGGATCGTT.............2111.00100010
dp5
GCTACTATCCCTGGGATTATCCCGAGCACAAACGCAACCTCCACGAGCCCGTGAGTAGTC------ACAGTA----------------------------ACATGA---AAACATTGA----TAAAATCT-----A----------TATA-TTTCCCTTTTTCCTTTTCCAGATCTCGGCGGATCATGACTTGTATAGCGAAGACCGCTACTCACAGGCCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................GAAGACCGCTACTCACAGGC...2012.0020200000000
.......................................................................................................................................................................................................GAAGACCGCTACTCACAGGCC..2112.0020200000000
........................................................................................................................................................................................CATGACTTGTATAGCGAAGACCGC..............2412.0020110000000
.......................................................................................................................................................................................................GAAGACCGCTACTCACAGGCCGA2311.0010100000000
......ATCCCTGGGATTATCCCGAGCACA................................................................................................................................................................................................2411.0010100000000
............GGGATTATCCCGAGCACAAACGCAACC.......................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................ATCTCGGCGGATCATGACT...............................1911.0010100000000
.......TCCCTGGGATTATCCCGAGCA..................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................ATGACTTGTATAGCGAAGACCGC..............2311.0010000000010
.................................................................................................................................................................TCCTTTTCCAGATCTCGGCGG........................................2111.0010100000000
...............................................................................................................................................................................................TGTATAGCGAAGACCGCTACTCACAGG....2711.0010000000010
...............................ACGCAACCTCCACGAGCC.............................................................................................................................................................................1811.0010100000000
...........TGGGATTATCCCGAGCACAAA..............................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................TGACTTGTATAGCGAAGACCGCT.............2311.0010000000010
...........................ACAAACGCAACCTCCACGA................................................................................................................................................................................1911.0010100000000
..................................................GTGAGTAGTC------ACAGTA----------------------------ACATG.....................................................................................................................2111.0010000100000
..........................................................................................................................................................................................TGACTTGTATAGCGAAGACC................2011.0010100000000
........CCCTGGGATTATCCCGAGCACA................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................ATGACTTGTATAGCGAAGACCGCTACT..........2711.0011000000000
.................................................................................................................................................................................................TATAGCGAAGACCGCTACTCACAGGC...2611.0010001000000
...........TGGGATTATCCCGAGCACAAACGCAACC.......................................................................................................................................................................................2811.0010001000000
droPer2
GCTACTATCCCTGGGATTATCCCGAGCACAAGCGCAACCTCCACGAGCCCGTGAGTAGTC------ACAGTA----------------------------ACATGA---AAACATTGA----TAAAATCT-----A----------TATA-TTTCCCTTTTTCCTTTTCCAGATCTCGGCGGATCATGACTTGTATAGCGAAGACCGCTACTCACAGGCCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................GACTTGTATAGCGAAGACCGCTA............2312.002000002
........CCCTGGGATTATCCCGAGCACAAGC.............................................................................................................................................................................................2511.001001000
...........................................................................................................................................................................................GACTTGTATAGCGAAGACCG...............2011.001010000
.........................................................................................................................................................................................ATGACTTGTATAGCGAAGACCGC..............2311.001100000
..........................................................................................................................................................................................TGACTTGTATAGCGAAGACCGCTA............2411.001000001
........................................................................................................................................................................................CATGACTTGTATAGCGAAGACCGC..............2411.001100000
..................................................................................................................................................................................GCGGATCATGACTTGTATAGC.......................2111.001100000
..................................................................................................................................................................................GCGGATCATGACTTGTATAG........................2011.001000001
.............................................................................................................................................................................TCTCGGCGGATCATGACTTGTATA.........................2411.001010000
droAna3
ATTACTATCCCTGGGACTATCCCGAGCACAAGCGCAACCTGCACGAGCCTGTGAGTGGCT------GTAGCACCA----------------------------AGA---TACCACCTT----TGAAAC-TAATATTATG-----GCAATC-T-----------TTCGTTTAGATCTCGGCGAATCATGATCTGTACAGCGAGGATCGCTACTCCCAGGCTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...ACTATCCCTGGGACTATCCC.......................................................................................................................................................................................................2012.002110000
......................................................................................................................................................................................ATCATGATCTGTACAGCGAGGAT.................2312.002011000
........CCCTGGGACTATCCCGAGCACAAGCGCAA.........................................................................................................................................................................................2911.001100000
.....................................................................................................................................................................................AATCATGATCTGTACAGCGA.....................2011.001100000
..TACTATCCCTGGGACTATCCCGAGCACA................................................................................................................................................................................................2811.001010000
....................................................................................................................................................................................GAATCATGATCTGTACAGCGAGGAT.................2511.001100000
............................................................................................................................................................................ATCTCGGCGAATCATGATCTGTACA.........................2511.001100000
....................................................................................................................................................................................GAATCATGATCTGTACAGCGAGG...................2311.001010000
................CTATCCCGAGCACAAGCGCAACCTGC....................................................................................................................................................................................2611.001010000
...............................GCGCAACCTGCACGAGCCT............................................................................................................................................................................1911.001100000
........................AGCACAAGCGCAACCTGCACGA................................................................................................................................................................................2211.001000001
.........CCTGGGACTATCCCGAGCACA................................................................................................................................................................................................2111.001100000
ATTACTATCCCTGGGACTAT..........................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................GAATCATGATCTGTACAGC.......................1911.001010000
.......................................................................................................................................................................................TCATGATCTGTACAGCGAGGA..................2111.001100000
......ATCCCTGGGACTATCCCGAGCACA................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................GAGGATCGCTACTCCCAGGC...2011.001010000
...........TGGGACTATCCCGAGCACAAGCGCA..........................................................................................................................................................................................2511.001100000
...........................ACAAGCGCAACCTGCACGAG...............................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................CAGCGAGGATCGCTACTCCCAGGCT..2511.001100000
................CTATCCCGAGCACAAGCGC...........................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................CTGTACAGCGAGGATCGCTA............2011.001100000
..............................AGCGCAACCTGCACGAGCCT............................................................................................................................................................................2011.001100000
........CCCTGGGACTATCCCGAGCACAAGCGC...........................................................................................................................................................................................2711.001010000
.....................................................................................................................................................................................AATCATGATCTGTACAGC.......................1811.001010000
............................CAAGCGCAACCTGCACGAG...............................................................................................................................................................................1911.001100000
......................CGAGCACAAGCGCAACCTGCACGAGC..............................................................................................................................................................................2611.001010000
.....TATCCCTGGGACTATCCCGAGC...................................................................................................................................................................................................2211.001010000
......................................................................................................................................................................................ATCATGATCTGTACAGCGAGGATCGC..............2611.001010000
............................................................................................................................................................................ATCTCGGCGAATCATGATCTGTAC..........................2411.001010000
..............GACTATCCCGAGCACAAGCGC...........................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................ATCATGATCTGTACAGCGAGG...................2111.001000010
.....................................................................................................................................................................................AATCATGATCTGTACAGCG......................1911.001100000
.................................................................................................................................................................................GGCGAATCATGATCTGTACAGCGAGG...................2611.001100000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCGC..............1911.001010000
.................................................................................................................................................................................GGCGAATCATGATCTGTAC..........................1911.001100000
droBip1
ACTACTACCCCTGGGACTACCCCGAGCACAAGCGCAACCTGCACGAGCCTGTGAGTGTCT------GAATCTTCGG--A-----ATAT---CTC-------------------CTTT-----TGTAAC-TAACTTTCT--------GGCA-CTT---------TTGGTTTAGATCTCGGCGAATCACGATCTGTACAGCGAGGATCGCTACTCCCAGGCCGASizeHit CountTotal NormTotal
No Reads
droKik1
ACTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAGCACGAGCCGGTAAGTAAGC------C-----ATGG--A-----A--CC-CCT----------TGA---T-CCAGC-------------TACTAAA-CG-------AGTA-TTT---------TTCTGGTAGATCTCGGCGGATCACGATCTGTACAGCGAGGATCGCTACTCGCAGGCGGASizeHit CountTotal NormTotal
No Reads
droFic1
CCTACTACCCCTGGGATTATCCGGAGCACAAGCGCAATCATCACGAGCCCGTAAGAGGACTACCC---------------A--A-T---AGTTA---TCTTCATGAG---G----------------ACC-----G----------CTTA-AATCCATTAAATCTCTTGTAGGTCTCGGCGGATCACGATCTTTACAGCGAGGATCGCTGGTCGCAGGCGGASizeHit CountTotal NormTotal
No Reads
droEle1
ACTACTATCCCTGGGACTATCCGGAGCACAAGCGTAATCACCACGAGCCCGTAAGTGGATCACTAC------------GCATG--C----TTCT---ATGCCATAAATA------------------CCC----AA-AGA---AT-------ATCGCTTTCGCCATCTGCAGATCTCGGCGGATCACGATCTGTACAGTGAGGATCGCTGGTCGCAGGCAGASizeHit CountTotal NormTotal
No Reads
droRho1
GCTACTATCCCTGGGATTATCCGGAGCACAAGCGTAATCAGCACGAGCCCGTAAGAGGATCACTC---------------ACA--T----CTCT---GTCCCATAGATA------------------TCCA----A-AGATACAT-------A---CTTTTTCCACCCGCAGATCTCGGCGGATCACGATCTGTACAGCGAAGATCGCTGGTCGCAGGCGGASizeHit CountTotal NormTotal
No Reads
droBia1
ACTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCACCACGAGCCCGTAAGCGGATTACCAG------------G-----CT---AACTA---GCTCCATAGAGC------------------CCCATTCAA-TG---CAC-TCTG-TTT---------CCCCCGCAGATCTCGGCGGATCACGATCTGTACAGCGAGGACCGCTGGTCGCAGGCGGASizeHit CountTotal NormTotal
No Reads
droTak1
ACTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAGCACGAGCCGGTAAGGGGATC-----GGATCTACGG--G-----CT----TTCA---GCTCTAAAAATA------------------CCTAATAAATTG--------G--------AATTCCCCCTTCGTAGATCTCTGCCAATCACGATCTGTACAGCGAGGATCGCTACTCGCAGGCGGASizeHit CountTotal NormTotal
No Reads
droEug1
CCTACTATCCCTGGGATTATCCGGAGCACAAGCGTAATCTTCACGAGCCCGTAAGATCAC------CCAGCTC-----------------CTTA---GTTTCATAGATA-----TCTA----TAATACA---------------TATGTA-TTT---------CGACTCTAGATCTCAGCTGATCACGATCTGTACAGCGAGGACCGTTGGTCGCAGGCCGASizeHit CountTotal NormTotal
No Reads
dm3
CGTACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAACACGAGCCCGTAAGCGCCA------ACATCAACGGCT--A--G-C---AG-CAGCTGCTGCATAA---AAAAA---GAGT-CAAACCCTG----A----------TCCA-TTT---------CCATTGCAGATCTCGGCGGATCATGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............GGGACTATCCGGAGCACAAGC.............................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGACTATCCGGAGCACA................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000300000000000000000000000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGC...2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000200000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCA......1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGCCGA2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....TATCCCTGGGACTATCCGGAGCACAAGC.............................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGCC..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTATCCGGAGCACAAGCGCAACCAAC....................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGCCG.2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCA......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................ATCCGGAGCACAAGCGCAACC.......................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCAGGCC..2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACTATCCCTGGGACTATCCGGAGC...................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGG....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCGC..............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CTCGGCGGATCATGATCTGTAA..........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGGAGCACAAGCGCAACCA......................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GCGGATCATGATCTGTACAGC.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......TCCCTGGGACTATCCGGAGCACA................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCAGGC...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACTATCCGGAGCACAAGCGCA..........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGACTATCCGGAGCACAAGCGCA..........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCACAAGCGCAACCAACACGAGCC.............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...ACTATCCCTGGGACTATCCGGAGCACAA...............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AGCGAGGATCGCTGGTCGCAGGCC..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCCGGAGCACAAGCGCAACCAA.....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATCCGGAGCACAAGCGCAAC........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................GCGCAACCAACACGAGCCC............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TATCCCTGGGACTATCCGGAGCACAAG..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGACTATCCGGAGCACAAGCGCAA.........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGATCTGTACAGCGAGGATCGC..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................A-TTT---------CCATTGCAGATCTCGGC..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATCTCGGCGGATCATGATCTGTA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGGACTATCCGGAGCACAAGCGCAAC........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CTGGGACTATCCGGAGCACAAGCGCAA.........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CGGCGGATCATGATCTGTACAGCG......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CGGATCATGATCTGTACAGCGA.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGTACTATCCCTGGGACTATCCGGAGCA..................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CTGGGACTATCCGGAGCACA................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCAGGC...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGGACTATCCGGAGCACA................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CA-TTT---------CCATTGCAGATCTCGG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCAGG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCGCTATC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGACTATCCGGAGCACAAGCGT...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
CGTACTATCCCTGGGACTATCCGGAGCC..................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CCTGGGACTATCCGGAGCACA................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................CTGTACAGCGAGGATCGCT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................CGCAACCAACACGAGCCC............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................GATCATGATCTGTACAGCGAGGATC................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ACAGCGAGGATCGCTGGTCGCAGG....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................GATCGCTGGTCGCAGGCCGA2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CTCGGCGGATCATGATCTGTACA.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CGGCGGATCATGATCTGTA...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATCCCTGGGACTATCCGGAGCAC.................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCAGGCCG.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TCGGCGGATCATGATCTGTACAGCGA.....................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCAGG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATCTCGGCGGATCATGATCT..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CCTGGGACTATCCGGAGCACAAGCGC...........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CCCTGGGACTATCCGGAG....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AGGATCGCTGGTCGCAGGCCGA2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGATCTGTACAGCGAGGATG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TCGGCGGATCATGATCTGTACAGCATC....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TATCCCTGGGACTATCCGGAGC...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GGCGGATCATGATCTGTACAGCGAGGA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCGGAGCACAAGCGCAACCA......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TCATGATCTGTACAGCGAGGAT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................AGCGAGGATCGCTGGTCGCAGGC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ATGATCTGTACAGCGAGGATCATC.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TCGGCGGATCATGATCTGTACAGCGAG....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGATCATGATCTGTACAGCGAGG...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TATCCCTGGGACTATCCGGAGCACA................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCAGGCC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................GGATCATGATCTGTACAGC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATCCGGAGCACAAGCGCAACCAACA...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTATCCGGAGCACAAGCGCA..........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATCCCTGGGACTATCCGGAGCACAAGC.............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGC.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGTACTATCCCTGGGACT............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAGCACAAGCGCAACCAACA...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAAGCGCAACCAACACGAG...............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ATCATGATCTGTACAGCGAGG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAGCACAAGCGCAACCAACACGAGCC.............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAAGCGCAACCAACACGAGCC.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TGTACAGCGAGGATCGCTGGT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCACAAGCGCAACCAACACGA................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CCCTG----A----------TCCA-TTT---------CCATTGCA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............................AAGCGCAACCAACACGAGCC.............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTATCCGGAGCACAAGCGC...........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATCTCGGCGGATCATGATCTGTACAGC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATCTGTACAGCGAGGATCGC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...........................ACAAGCGCAACCAACACGAGCCC............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TCCA-TTT---------CCATTGCAGATCTCG............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................CTCGGCGGATCATGATCTGTAC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATCCCTGGGACTATCCGGAGCACA................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCATC.............2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CATACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAACACGAGCCCGTAAGCCCCA------ACAGCACCAGCT--A--G-C---AG-CT---GCTGCATGA---AAA-----GAGT-CAAAACCTG----A----------TGCA-TTT---------CCATTGCAGATTTCGGCGGATCATGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCAGGCCGA2512.00201100000000000000
....................................................................................................................................................................................GGATCATGATCTGTACAGC.......................1911.00100010000000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGCC..2111.00101000000000000000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCG...............1811.00100100000000000000
.................................................................................................................................................................................GGCGGATCATGATCTGTACAGC.......................2211.00101000000000000000
.........................................................................................................................................................T---------CCATTGCAGATTTCGGC..........................................1821.00200200000000000000
.......................................................................................................................................................................................TCATGATCTGTACAGCGAGGATCGC..............2511.00100010000000000000
...........TGGGACTATCCGGAGCACAAGCGCAACC.......................................................................................................................................................................................2811.00100000000000010000
............................................................................................................................................................................ATTTCGGCGGATCATGATCTGTACAGC.......................2711.00101000000000000000
.............................................................................................................................................................................................TCTGTACAGCGAGGATCGC..............1911.00100100000000000000
..........................................................................................................................................................................................TGATCTGTACAGCGAGGATCGT..............2211.00100000000000010000
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCAGGCC..2211.00100010000000000000
.....................................................................................................................................................................................GATCATGATCTGTACAGCGAGGAT.................2411.00100100000000000000
droSec2
CATACTATCCCTGGGACTATCCGGAGCACAAGCGCAACCAACACGAGCCCGTAAGCCCGA------ACAGCACCAGCT--A--G-C---AG-CA---GCTGCATGA---AAA-----GAGT-CAAACCCTG----A----------TGCA-TTT---------CCATTGCAGATTTCGGCGGATCATGATTTGTACAGCGAGGATCGCTGGTCGCAGGCCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................CATGATTTGTACAGCGAGGAT.................2111.0011000
..................................................................................................................................................................................................ACAGCGAGGATCGCTGGTCGCAGGCC..2611.0010010
.....................................................................................................................................................................................GATCATGATTTGTACAGCG......................1911.0011000
..................ATCCGGAGCACAAGCGCAACCAACACG.................................................................................................................................................................................2711.0010100
......................................................................................................ATGA---AAA-----GAGT-CAAACCCTG----A----------TGCA-TTT---------...........................................................2811.0010100
..........CTGGGACTATCCGGAGCACA................................................................................................................................................................................................2011.0011000
....................................................................................................................................................................................................AGCGAGGATCGCTGGTCGC.......1911.0011000
..............GACTATCCGGAGCACAAGCGCAACC.......................................................................................................................................................................................2511.0010010
..................ATCCGGAGCACAAGCGCAACCAACA...................................................................................................................................................................................2511.0010010
..............GACTATCCGGAGCACAAGCGCAACCA......................................................................................................................................................................................2611.0010100
......................................................................................................................................................................................................CGAGGATCGCTGGTCGCA......1811.0011000
...ACTATCCCTGGGACTATCCGGAGC...................................................................................................................................................................................................2411.0010010
................CTATCCGGAGCACAAGCGCAAC........................................................................................................................................................................................2211.0010010
CATACTATCCCTGGGACTATCCGGA.....................................................................................................................................................................................................2511.0010010
droYak3
CGTATTATCCCTGGGATTATCCGGAGCACAAGCGCAACCACCACGAGCCCGTATGTGCCTA-----ACACCAGCAG--A-----TT---AGTTA---GCTTCACAAC-A-----TCTA--------GCCTA----A----------TTCA-TTC--------TCATTTCTAGATCTCGGCGGATCATGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................CATGATCTGTACAGCGAGGAT.................2113.00300000030000
.............................................................................................................................................................................TCTCGGCGGATCATGATCTGT............................2112.00220000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGCCGA2312.00202000000000
.........CCTGGGATTATCCGGAGCACAAGCGCA..........................................................................................................................................................................................2711.00101000000000
................................................................................................................................................................................................GTACAGCGAGGATCGCTGGTCGCAGGCC..2811.00100100000000
.................TATCCGGAGCACAAGCGCAAC........................................................................................................................................................................................2111.00100100000000
.....TATCCCTGGGATTATCCGGA.....................................................................................................................................................................................................2011.00101000000000
....................CCGGAGCACAAGCGCAACCACCACGA................................................................................................................................................................................2611.00101000000000
.......................................................................................................................................................................................TCATGATCTGTACAGCGAGGATCGCT.............2611.00101000000000
......................................................................................................................................................................................ATCATGATCTGTACAGCGAGGATC................2411.00100000010000
........................................................................................................................................................................................CATGATCTGTACAGCGAGGATC................2211.00100100000000
.......TCCCTGGGATTATCCGGAG....................................................................................................................................................................................................1911.00101000000000
........................................................................................................................................................................................................AGGATCGCTGGTCGCAGGC...1911.00100100000000
..................ATCCGGAGCACAAGCGCAACCACCACG.................................................................................................................................................................................2711.00101000000000
.............................................................................................................................................................................TCTCGGCGGATCATGATCTGG............................2111.00110000000000
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGGCC..2111.00101000000000
........................................................................................................................................................................................CATGATCTGTACAGCGAGGATCGCT.............2511.00100100000000
droEre2
CGTACTATCCCTGGGATTATCCGGAGCACAAGCGAAACCACCACGAGCCCGTAAGTGCCA------GCAACATCAGCT-----------AGTTG---GCTTCAAAA------AATCGA-ATCTAAAACCTA----A----------TATA-TTT---------CGATTGTAGATCTCGGCGGATCACGATCTGTACAGCGAGGATCGCTGGTCGCAGGCCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................ACAAGCGAAACCACCACGAGC..............................................................................................................................................................................2112.0021001000
..............GATTATCCGGAGCACAAGC.............................................................................................................................................................................................1912.0020000200
.......................................................................................................................................................................................................GAGGATCGCTGGTCGCAGG....1911.0010000010
.............................AAGCGAAACCACCACGAGCCC............................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................GATCTGTACAGCGAGGATCGCTGGT..........2511.0011000000
......................................................................................................................................................................................ATCACGATCTGTACAGCGAGGAT.................2311.0010001000
...........................................................................................................................................................................................GATCTGTACAGCGAGGAT.................1811.0011000000
....................................................................................................................................................................................GGATCACGATCTGTACAGCGAGGATCGCT.............2911.0010000010
..............................................................................................................................................................................................CTGTACAGCGAGGATCGCTGGT..........2211.0011000000
..............................................................................................................................................................................CTCGGCGGATCACGATCTGTACAGC.......................2511.0011000000
..................ATCCGGAGCACAAGCGAAACCACCACG.................................................................................................................................................................................2711.0011000000
............................................................................................................................................................................................ATCTGTACAGCGAGGATCGC..............2011.0010100000
......ATCCCTGGGATTATCCGGAGCACAAGC.............................................................................................................................................................................................2711.0011000000
..............GATTATCCGGAGCACAAGCGAAAC........................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCAGGCC..2311.0010000010
.................TATCCGGAGCACAAGCGAAACCACCA...................................................................................................................................................................................2611.0011000000
.....TATCCCTGGGATTATCCGGA.....................................................................................................................................................................................................2011.0011000000
.....................................................................................................................................................................................................GCGAGGATCGCTGGTCGCAGGC...2211.0011000000
.GTACTATCCCTGGGATTATCCGG......................................................................................................................................................................................................2311.0011000000
.................................................................................................................................................................................GGCGGATCACGATCTGTACAGC.......................2211.0011000000
.............................................................................................................................................................................TCTCGGCGGATCACGATCTG.............................2011.0011000000
..........CTGGGATTATCCGGAGCACA................................................................................................................................................................................................2020.5011000000
..........CTGGGATTATCCGGAGCAC.................................................................................................................................................................................................1920.5011000000
...........TGGGATTATCCGGAGCAC.................................................................................................................................................................................................1820.5010000100

Generated: 05/19/2015 at 03:20 PM