ID:

dvi_9064

 Coordinate:

scaffold_12928:5894057-5894207 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.0 -31.9 -31.9

Flybase annnotation

CDS [Dvir\GJ16984-cds]; exon [dvir_GLEANR_17491:2]; intron [Dvir\GJ16984-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCCATCCCGATCGCATTATGAAGGAGCTGCAGTGCATGACAGATATGGGGTATGTCGAATAACAGAATTCGTAAGCTAATTCGAATGCCAAGCAAAACGTTAATAATTCCTCAATGTGTGTCGGCCTGTGCCGCATTTCCAATGAGAGCGTCACGAACGACGTCAGCCGCTCGCAGCAGACGTATCTTGTCATACGTATCTTACATACGTCATTGCAATTTATTTAAAGTTGCCTTTGTCATCGATTGCT
**************************************************(((((((((((..................)))))).(((...)))..(((((........((((.((.(((.((((....)))))))...)).))))))))).((((...(((((.((........)).)))))...))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 M047
female body
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 V053
head
 M028
head
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
...................TGAAGGAGCTGCAGTGCATG.................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................GAAGGAGCTGCAGTGCATGACAGAT.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................ACGACGTCAGCCGCTCGCAGCAGAC..................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................AGTGCATGACAGATATGGGGGGC..................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.GCCATCCCGATCGCATTAT....................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...........................CTGCAGTGCATCACAGAT.............................................................................................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................ATGTGTGTCGGCCTGCTCC...................................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................ATGTGTTGCGGCTTGTGCCGC.................................................................................................................... 21 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................CAGCACAACGTTAATCATTC............................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................ACGAGGTCAGCCGGTCGCC........................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................TAATTGCTCTATGTCTGTCG............................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.............GCATTATCAAGGCGCTGC............................................................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................AAGTTATTGCAATTTATTTA........................ 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCGGTAGGGCTAGCGTAATACTTCCTCGACGTCACGTACTGTCTATACCCCATACAGCTTATTGTCTTAAGCATTCGATTAAGCTTACGGTTCGTTTTGCAATTATTAAGGAGTTACACACAGCCGGACACGGCGTAAAGGTTACTCTCGCAGTGCTTGCTGCAGTCGGCGAGCGTCGTCTGCATAGAACAGTATGCATAGAATGTATGCAGTAACGTTAAATAAATTTCAACGGAAACAGTAGCTAACGA
**************************************************(((((((((((..................)))))).(((...)))..(((((........((((.((.(((.((((....)))))))...)).))))))))).((((...(((((.((........)).)))))...))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 V053
head
 SRR060671
9x160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 M028
head
 GSM1528803
follicle cells		 V116
male body		 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060681
Argx9_testes_total
.....................................................................................................................................................................TAGGCTAGCGGCGTCTGCATA................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ACGGTAGGGCGAGCGTAATCC...................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................AAAGGTTTCTCTCGCCGAG................................................................................................ 19 3 20 0.50 10 2 1 0 0 1 0 0 0 1 1 1 0 1 1 1
..........................................................................................................................................................................................................ATGTATGAAGTAAGGTTACAT............................ 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCAGAGAATGTAAGTAGTA..................................... 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
TCGGTACGGCTAGCTTAA......................................................................................................................................................................................................................................... 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTGCTGCAGTCGGAGAACCT........................................................................... 20 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................AACGTCACGTACTGTCTT.............................................................................................................................................................................................................. 18 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGCCGTAGAGGTTACTCT....................................................................................................... 18 2 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................ATGTTTGCTGCAGTCGGAG................................................................................ 19 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................CACGTCGTAAAGGTTACGCG....................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:5894007-5894257 + dvi_9064 AGCCATCCCGATCGCATTATGAAGGAGCTGCAGTGCATGACAGATATGGGGTATGTCG---A-------AT---------------------------------------AACAGAATTCGTAA--GCTAATTCGA-----------------------------ATGCCAAGCAA------AACG-------------------------------------------------------------------------------------------TTAAT---AATTCCTC-----------------------------AATGTGTG------------------------------------------------TCGGCCTG----------------TGCCGCATTTCCAATGA--GAGCGTCA-----------CGAAC--GACGTCAGCCGCTCGCAGCAGACGTATCTT-G-TCATACGT----ATCTTA--CATACGTCATTGCAATTTA--T-------------TTAAAGTTGCC---TTTGTCA----TC---------------GATTG---------------------------------------------------CT
droMoj3 scaffold_6359:4386444-4386788 + AGCCATCCGGACCGCATTATGAAGGAGCTGCAGTGCATGACTGACATGGGGTAAGTCTACCACATTC-CAATATTATC----AAT-------------------------ATGAAAATTTATAATTACTA----------------------------------------------------------------------------------------ATTGCAAG-A-----------------------------------------CAAAAATGTAAAT---AATTTCTCAGCGAATTATTTATGCATATACATACATACATATGT----------------------------------ATAT------ACGCGTGTGTGTG----------------TGCTGCCTTTTCACTGAGAGAGCGTCA-----------CGAAC--GACGTCAGCCGGCTGCCGTAGACGTCTCTTCGATTCTACGTGCCAACGGCA--TATACGTCATTGCAATTTA--T-------------TTCAAGTTGCCGT----------------------------------TGGCGTTCTCATTCCCGCTCCTGCTCCCACTCCCATT---GCCATCG----GT
droGri2 scaffold_14853:4998906-4999051 + AGTCACCCGGATCGCATTATGAAGGAGCTGCAATGCATGACAGATATGGGGTATGTAC---G-------ATC------------------C--------------------------------------------------------------------------------AGCTA------GTTG-------------------------------TATGATCCA-TC-------T------------------A----T-AAAATATCAATAAA-----------------------TCAT-----------------------------------------------------------------------CAAGCAATATTCAATCTGCACCCGACTCTGAC----------------------------------------------------------GC-------------------------GACTCCA--A--------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:3623738-3623966 + AGCCATCCGGATCGTATAATGAAGGAGCTGCAATGCATGACCAAAATGGGGTAAGGAT---------------------------------------------------------------------------------------------------------------------A------AACG------------------------------------------------------------------------------------TTTTAA-----C-----TC----------TCTC----------------TCATATATGTATCTGTA-------------------------ATTAGTCT----TTACGCCTGCGTC------------------------------------------ATGATACAACGTAAA-CGCGACGTCAGTCGGCGGCATA-GTAGGGTCTTCG--------------TTT------TATTTTATT-TAATTTTTGTTTTTTTTTTTTCTTTGCCGTCGCT---CT------------------------------------------------------------------TTGCTGTCGTCGTTTACG
dp5 XL_group1a:356757-356812 + AGCCATCCCGACCGGATTATGAAGGAGCTCCAGTGCATGACCAAAATGGGGTAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_26:309116-309171 - AGCCATCCCGACCGGATTATGAAGGAGCTCCAGTGCATGACCAAAATGGGGTAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12929:3140773-3141016 + AGCCATCCGGATAGGATTATGAAGGAGCTCCAGTGTATGACAAAAATGGGGTAGGTCT---T-AGTC--------C------------------------------------------------------------------------AGTTACAAACCCAGTTACTGCCCAGTTA------CATGTATGA-------------------------GAATTCCT-TTTTTTTTTT-A----------------------TT-TATC----------------------------------CGC--------CC------TCGCGTGTGTGTGCGTG----------------GTTGGCTTTTTTCGT------CCTCGCCTGCGTC------------------------------------------A---AACGCCGTTAACC--GACGTCAGCCGGTA---GC-------------------------GGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTCAGTTTGCC-----------------------------------------------------------------------------------------
droBip1 scf7180000396695:34811-34867 + AGCCATCCGGATAGGATTATGAAGGAGCTGCAGTGTATGACAAAAATGGGGTAGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302621:616824-616879 - AGCCATCCGGATCGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454072:869455-869682 - AGCCATCCGGACAGGATAATGAAGGAGCTACAGTGCATGACCAAAATGGGGTAGGTCC---TTAG----G--------------------------------------------------------------------------T-----------------------------TAGCCCTTAACGTATGT-------------------------GTGTCCCT-CGTTGT--AT-A----------------------TG-TGTA----------------------------------CAC----------------------------------------------CCACGCACGCTCTTTCGTCCT---CCTCGCCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTGGTAGA-------------------------CGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACGA----GCGAGATGG------------------------------------------------------------------
droEle1 scf7180000491044:438825-439073 + AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCC---TTCA----G--------------------------------------------------------------------------T-----------------------------TA------CACGTATCCCATACTA-TCCCTAGCATCCTTAGTGTATCCCCTG-ATAT--GTCT------------------GCCATG-TGTA----------------------------------CAC----------------------------------------------CCACG----CTCTTTCGT------CCTCGCCTGCGTC------------------------------------------A---AACACCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------GGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGATGGAGA-----GACTG---------------------------------------------------TG
droRho1 scf7180000776942:124624-124860 + AGCCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCC---TCAA----G--------------------------------------------------------------------------T-----------------------------TA------CA--TATCCC---CTATTCCCGATTATCCTT--AGAATCCCCTG-AA-------A----------------------TG-TATA----------------------------------CAC----------------------------------------------CCACG----CTCTTTCGT------CCTCGCCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------CGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGATGGGGA-----GACTATAG------------------------------------------------CG
droBia1 scf7180000301760:2850358-2850635 - AGCCACCCGGACAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCT---G-GGCC--------CGCGGGGCTGGGCCCCTGG------GAC--------------------------TCCTTGCACACCACGCTACAGA-----------------------TA------CAC-------------------------------------------------------ACTCTGTCCCG-----------------------GG-----------------------CCAC----------------------------------CGGGCCCTCCGCCCACGCACGCCGCCTCGTCCTCGTCCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------CGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGAGGGCGAGCGCCGACTGTGG------------------------------------------------CG
droTak1 scf7180000414549:163628-163846 + AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAGATGGGGTAGGTCT---TTAATC-------------------------------------CTAATC--------------------------------------------------------------------------------------------C--TAATCCCTA------------------------------------------------------------------------------------------------------------TATATGTATATACAGTGAGCCCTCCTTCCACG----TCC--TCTT------CTTCGTCTGCGTC------------------------------------------A---GGCGCCGTTAAAC--GACGTCAGCCGGTAGCTGC-------------------------CGCTCCATATCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGT---------------G---------------------------------------------------AG
droEug1 scf7180000409522:220610-220845 + AGCCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCC---TTAATC--------C----------------GT------AATCCCTTG------------------------------------------------------------------------------------------------TTATCCTT-TAGTATTCCCTC-AT-------A----------------------TC-TGTA----------------------------------CAC----------------------------------------------CCACGTACACTTCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------CGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----TCCGCATGAATGA----GCGAGATGGCGA-----GACTATAGCG----------------------------------------------TT
dm3 chrX:6549756-6550049 + AGTCATCCGGATAGGATAATGAAGGAGTTGCAGTGCATGACCAAAATGGGGTAGGTTC--CTCATTTCGTTTCCCCAC----TTGGTGTCCTGT-------GTCCTTT--------------------------------------------------------------------------------------GCCC-TCCC--GTATCCTTATAGTATCGCCCG-AC-------T------------------G----GTTGTAAACCAAACAACCAACCACCCACC----------CCAC----------------------------------------------CCACGCACGCCGCTTCGTCC----CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACG-GCAAGCGAGATGGCAT-----GATTG---------------------------------------------------TT
droSim2 x:6151949-6152234 + AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTGTTCCTCATTC-CTTTCCCCAC----TTGGTGTCCTGTGTCCTGTGTCCTGT--------------------------------------------------------------------------------------GCCG-TCCC--GTATCCTTATAGTATCGCCCG-AC-------T------------------G----G-TGTAAACCAAACAA-----------------------CCAC----------------------------------------------CCACGCACGCCGCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACG-GCGAGCGAGATGGCAT-----GATTG---------------------------------------------------TT
droSec2 scaffold_4:255006-255289 - AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTTC--CTCATTC-CTTTCCCCAC----TTGGTGTCCTGTGTCCTGTGTCCTGT--------------------------------------------------------------------------------------GCCG-TTCC--GTATCCTTATAGTATCGCCCG-AC-------T------------------G----G-TGTAAACCAGACAA-----------------------CCAC----------------------------------------------CCACGCACGCCGCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACG-GCGAGCGAGATGGCAT-----GATTG---------------------------------------------------TT
droYak3 X:2512364-2512629 + AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACAAAAATGGGGTAGGTTC---TTCG----CT----TGC----TTGCTTTCCTGT------TATCCTGTGC--------------------------------------------------------------------------------------------C--GCATCCTTATAGTATCGCAT-----------ACGAATTCGGT---GGTACG----ATGGT-------AGAG-----------------------CCAC----------------------------------------------CCACGCACGCTTCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTA-----GCCGCACGAACGA----GCGAGATGGCAT-----GATTG---------------------------------------------------TA
droEre2 scaffold_4690:15476972-15477224 + AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTTC---TTTG--CGCTT------------------CTGT------TATCCTGTGC--------------------------------------------------------------------------------------------C--TTATCCATATAGTATTGACCG-AC-------T----TCGC-------AACG----GTGGT-------AGAA-----------------------TCAC----------------------------------------------CCACGCTCACTGATTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCAGTATAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATCGCAATTAA--T-------------TTT-----GCCGCACGAACGA----GCGAGATGGCAT-----GATCG---------------------------------------------------TA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCCATCCCGATCGCATTATGAAGGAGCTGCAGTGCATGACAGATATGGGGTATGTCG---A-------AT---------------------------------------AACAGAATTCGTAA--GCTAATTCGA-----------------------------ATGCCAAGCAA------AACG-------------------------------------------------------------------------------------------TTAAT---AATTCCTC-----------------------------AATGTGTG------------------------------------------------TCGGCCTG----------------TGCCGCATTTCCAATGA--GAGCGTCA-----------CGAAC--GACGTCAGCCGCTCGCAGCAGACGTATCTT-G-TCATACGT----ATCTTA--CATACGTCATTGCAATTTA--T-------------TTAAAGTTGCC---TTTGTCA----TC---------------GATTG---------------------------------------------------CTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................TGAAGGAGCTGCAGTGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000020000000000000000000000000000000000
....................GAAGGAGCTGCAGTGCATGACAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--GACGTCAGCCGCTCGCAGCAGAC.....................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................AGTGCATGACAGATATGGGGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
.GCCATCCCGATCGCATTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
AGCCATCCGGACCGCATTATGAAGGAGCTGCAGTGCATGACTGACATGGGGTAAGTCTACCACATTC-CAATATTATC----AAT-------------------------ATGAAAATTTATAATTACTA----------------------------------------------------------------------------------------ATTGCAAG-A-----------------------------------------CAAAAATGTAAAT---AATTTCTCAGCGAATTATTTATGCATATACATACATACATATGT----------------------------------ATAT------ACGCGTGTGTGTG----------------TGCTGCCTTTTCACTGAGAGAGCGTCA-----------CGAAC--GACGTCAGCCGGCTGCCGTAGACGTCTCTTCGATTCTACGTGCCAACGGCA--TATACGTCATTGCAATTTA--T-------------TTCAAGTTGCCGT----------------------------------TGGCGTTCTCATTCCCGCTCCTGCTCCCACTCCCATT---GCCATCG----GTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................ATGAAGGAGCTGCAGTGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
................TTATGAAGGAGCTGCAGTGCATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
droGri2
AGTCACCCGGATCGCATTATGAAGGAGCTGCAATGCATGACAGATATGGGGTATGTAC---G-------ATC------------------C--------------------------------------------------------------------------------AGCTA------GTTG-------------------------------TATGATCCA-TC-------T------------------A----T-AAAATATCAATAAA-----------------------TCAT-----------------------------------------------------------------------CAAGCAATATTCAATCTGCACCCGACTCTGAC----------------------------------------------------------GC-------------------------GACTCCA--A--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AGCCATCCGGATCGTATAATGAAGGAGCTGCAATGCATGACCAAAATGGGGTAAGGAT---------------------------------------------------------------------------------------------------------------------A------AACG------------------------------------------------------------------------------------TTTTAA-----C-----TC----------TCTC----------------TCATATATGTATCTGTA-------------------------ATTAGTCT----TTACGCCTGCGTC------------------------------------------ATGATACAACGTAAA-CGCGACGTCAGTCGGCGGCATA-GTAGGGTCTTCG--------------TTT------TATTTTATT-TAATTTTTGTTTTTTTTTTTTCTTTGCCGTCGCT---CT------------------------------------------------------------------TTGCTGTCGTCGTTTACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................ATGACCAAAATGGGGTAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................GTC------------------------------------------ATGATACAACGTAAA-CGCGAC.........................................................................................................................................................................................2411.00100010
............................................................................................................................................................................................................................................................................................................................................................................AGTCT----TTACGCCTGCGTC------------------------------------------ATG............................................................................................................................................................................................................2111.00101000
dp5
AGCCATCCCGACCGGATTATGAAGGAGCTCCAGTGCATGACCAAAATGGGGTAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AGCCATCCCGACCGGATTATGAAGGAGCTCCAGTGCATGACCAAAATGGGGTAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................GAAGGAGCTCCAGTGCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............ATTATGAAGGAGCTCCAGTGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droAna3
AGCCATCCGGATAGGATTATGAAGGAGCTCCAGTGTATGACAAAAATGGGGTAGGTCT---T-AGTC--------C------------------------------------------------------------------------AGTTACAAACCCAGTTACTGCCCAGTTA------CATGTATGA-------------------------GAATTCCT-TTTTTTTTTT-A----------------------TT-TATC----------------------------------CGC--------CC------TCGCGTGTGTGTGCGTG----------------GTTGGCTTTTTTCGT------CCTCGCCTGCGTC------------------------------------------A---AACGCCGTTAACC--GACGTCAGCCGGTA---GC-------------------------GGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTCAGTTTGCC-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AGCCATCCGGATAGGATTATGAAGGAGCTGCAGTGTATGACAAAAATGGGGTAGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGCCATCCGGATCGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGCCATCCGGACAGGATAATGAAGGAGCTACAGTGCATGACCAAAATGGGGTAGGTCC---TTAG----G--------------------------------------------------------------------------T-----------------------------TAGCCCTTAACGTATGT-------------------------GTGTCCCT-CGTTGT--AT-A----------------------TG-TGTA----------------------------------CAC----------------------------------------------CCACGCACGCTCTTTCGTCCT---CCTCGCCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTGGTAGA-------------------------CGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACGA----GCGAGATGG------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCC---TTCA----G--------------------------------------------------------------------------T-----------------------------TA------CACGTATCCCATACTA-TCCCTAGCATCCTTAGTGTATCCCCTG-ATAT--GTCT------------------GCCATG-TGTA----------------------------------CAC----------------------------------------------CCACG----CTCTTTCGT------CCTCGCCTGCGTC------------------------------------------A---AACACCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------GGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGATGGAGA-----GACTG---------------------------------------------------TGSizeHit CountTotal NormTotal
No Reads
droRho1
AGCCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCC---TCAA----G--------------------------------------------------------------------------T-----------------------------TA------CA--TATCCC---CTATTCCCGATTATCCTT--AGAATCCCCTG-AA-------A----------------------TG-TATA----------------------------------CAC----------------------------------------------CCACG----CTCTTTCGT------CCTCGCCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------CGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGATGGGGA-----GACTATAG------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droBia1
AGCCACCCGGACAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCT---G-GGCC--------CGCGGGGCTGGGCCCCTGG------GAC--------------------------TCCTTGCACACCACGCTACAGA-----------------------TA------CAC-------------------------------------------------------ACTCTGTCCCG-----------------------GG-----------------------CCAC----------------------------------CGGGCCCTCCGCCCACGCACGCCGCCTCGTCCTCGTCCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------CGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGAGGGCGAGCGCCGACTGTGG------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droTak1
AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAGATGGGGTAGGTCT---TTAATC-------------------------------------CTAATC--------------------------------------------------------------------------------------------C--TAATCCCTA------------------------------------------------------------------------------------------------------------TATATGTATATACAGTGAGCCCTCCTTCCACG----TCC--TCTT------CTTCGTCTGCGTC------------------------------------------A---GGCGCCGTTAAAC--GACGTCAGCCGGTAGCTGC-------------------------CGCTCCATATCTACGTCATTGCAATTTA--T-------------TTC-----GCCGCACGAACGA----GCGAGT---------------G---------------------------------------------------AGSizeHit CountTotal NormTotal
No Reads
droEug1
AGCCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTCC---TTAATC--------C----------------GT------AATCCCTTG------------------------------------------------------------------------------------------------TTATCCTT-TAGTATTCCCTC-AT-------A----------------------TC-TGTA----------------------------------CAC----------------------------------------------CCACGTACACTTCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGGTA---GC-------------------------CGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTC-----TCCGCATGAATGA----GCGAGATGGCGA-----GACTATAGCG----------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
dm3
AGTCATCCGGATAGGATAATGAAGGAGTTGCAGTGCATGACCAAAATGGGGTAGGTTC--CTCATTTCGTTTCCCCAC----TTGGTGTCCTGT-------GTCCTTT--------------------------------------------------------------------------------------GCCC-TCCC--GTATCCTTATAGTATCGCCCG-AC-------T------------------G----GTTGTAAACCAAACAACCAACCACCCACC----------CCAC----------------------------------------------CCACGCACGCCGCTTCGTCC----CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACG-GCAAGCGAGATGGCAT-----GATTG---------------------------------------------------TTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....ATCCGGATAGGATAATGAAGGAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCATCCGGATAGGATAATGAAGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................T-------GTCCTTT--------------------------------------------------------------------------------------GCCC-TCCC--GTATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GTATCCTTATAGTATCGCCCG-AC-------T------------------G----.......................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATAATGAAGGAGTTGCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CATCCGGATAGGATAATGAAGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGAAGGAGTTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
......CCGGATAGGATAATGAAGGAGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGAAGGAGTTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGCAGTGCATGACCAAAATGGGGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AATGAAGGAGTTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAGGATAATGAAGGAGTTGCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCGGATAGGATAATGAAGGAGTTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............AGGATAATGAAGGAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCGGATAGGATAATGAAGGAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--GACGTCAGCCGCCGGCAGC-------------------------G...............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TCCTTATAGTATCGCCCG-AC-------T------------------............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATAGGATAATGAAGGAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............GGATAATGAAGGAGTTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TCCTGT-------GTCCTTT--------------------------------------------------------------------------------------GCCC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GTTGCAGTGCATGACCAAAATGGGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......CGGATAGGATAATGAAGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCGGATAGGATAATGAAGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CTTATAGTATCGCCCG-AC-------T------------------G----G......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........TAGGATAATGAAGGAGTTGCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAC--GACGTCAGCCGCCGGC............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGAAGGAGTTGCAGTGCATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................TGCAGTGCATGACCAAAATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................TAATGAAGGAGTTGCAGTGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................TTGCAGTGCATGACCAAAATGGGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGATGGCAT-----GATTG---------------------------------------------------..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................AGGAGTTGCAGTGCATGACCAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................TAATGAAGGAGTTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACG-GCAAGCGAGATGGCA................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..............GATAATGAAGGAGTTGCAGTGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAATTTATAT-------------TTC-----GCCA........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGAAGGAGTTGCAGTGCATGACCAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................TGAAGGAGTTGCAGTGCATGACCAAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACGAACG-GCAAGCGAGATGGC.................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGGATAATGAAGGAGTTGCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AATGAAGGAGTTGCAGTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................TAATGAAGGAGTTGCAGTGCATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCGGATAGGATAATGAAGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGCATGACCAAAATGGGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAGGATAATGAAGGAGTTGCAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TGTCCTGT-------GTCCTTT--------------------------------------------------------------------------------------GCCC-T...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAACG-GCAAGCGAGATGG..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................GGGGTAGGTTC--CTCATTTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATCCGGATAGGATAATGAAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGAAGGAGTTGCAGTGCATGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GGATAATGAAGGAGTTGCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGTGCATGACCAAAATGGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCTTCGTCC----CCTCGTCTGC............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTGTTCCTCATTC-CTTTCCCCAC----TTGGTGTCCTGTGTCCTGTGTCCTGT--------------------------------------------------------------------------------------GCCG-TCCC--GTATCCTTATAGTATCGCCCG-AC-------T------------------G----G-TGTAAACCAAACAA-----------------------CCAC----------------------------------------------CCACGCACGCCGCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACG-GCGAGCGAGATGGCAT-----GATTG---------------------------------------------------TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................TGCAGTGCATGACCAAAATGGGGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
........GGATAGGATAATGAAGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
...........TAGGATAATGAAGGAGCTGCAGTGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................GAAGGAGCTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...................TGAAGGAGCTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
droSec2
AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTTC--CTCATTC-CTTTCCCCAC----TTGGTGTCCTGTGTCCTGTGTCCTGT--------------------------------------------------------------------------------------GCCG-TTCC--GTATCCTTATAGTATCGCCCG-AC-------T------------------G----G-TGTAAACCAGACAA-----------------------CCAC----------------------------------------------CCACGCACGCCGCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTATAT-------------TTC-----GCCGCACGAACG-GCGAGCGAGATGGCAT-----GATTG---------------------------------------------------TTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................AAGGAGCTGCAGTGCATGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200
.................AATGAAGGAGCTGCAGTGCATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
............AGGATAATGAAGGAGCTGCAGTGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.........GATAGGATAATGAAGGAGCTGCAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
droYak3
AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACAAAAATGGGGTAGGTTC---TTCG----CT----TGC----TTGCTTTCCTGT------TATCCTGTGC--------------------------------------------------------------------------------------------C--GCATCCTTATAGTATCGCAT-----------ACGAATTCGGT---GGTACG----ATGGT-------AGAG-----------------------CCAC----------------------------------------------CCACGCACGCTTCTTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCGTTAAAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATTGCAATTTA--T-------------TTA-----GCCGCACGAACGA----GCGAGATGGCAT-----GATTG---------------------------------------------------TASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................ATGAAGGAGCTGCAGTGCATGACAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..................ATGAAGGAGCTGCAGTGCATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAGC-------------------------GGCTCCA--TCTACGT................................................................................................................................2111.00101000000000
..................ATGAAGGAGCTGCAGTGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
AGTCATCCGGATAGGATAATGAAGGAGCTGCAGTGCATGACCAAAATGGGGTAGGTTC---TTTG--CGCTT------------------CTGT------TATCCTGTGC--------------------------------------------------------------------------------------------C--TTATCCATATAGTATTGACCG-AC-------T----TCGC-------AACG----GTGGT-------AGAA-----------------------TCAC----------------------------------------------CCACGCTCACTGATTCGT------CCTCGTCTGCGTC------------------------------------------A---AACGCCAGTATAC--GACGTCAGCCGCCGGCAGC-------------------------GGCTCCA--TCTACGTCATCGCAATTAA--T-------------TTT-----GCCGCACGAACGA----GCGAGATGGCAT-----GATCG---------------------------------------------------TASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/19/2015 at 03:21 PM