ID:

dvi_8861

 Coordinate:

scaffold_12928:4228251-4228401 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.97 -29.9 -29.8

Flybase annnotation

exon [dvir_GLEANR_17038:1]; CDS [Dvir\GJ16530-cds]; intron [Dvir\GJ16530-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGTCCGCGCCTCACACCCATTGGCATTTCGCGTGAGCCGGAACCGGCATTGTAAGTGCATTGGGGTTATGACATTATGACACTTGTTCGTTTTGCTTCTGCCTTCAGCCTGTGCGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGAATGAGTGAGTGCACAGAAGCTAGCTAAAGTGTGCGAAGAGTGCGCAAAACAATCTGTTATAACATTTTTGGGCGAAAGCGTTTTGTTGTCGTGTGTGTGTG
*****************************************************************..............(((((.(((((..(((((..((....(((((((((((.(((...(((........................))).))).))))))))..))).))..))))).))))))))))....******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060687
9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060670
9_testes_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 V047
embryo
 SRR060656
9x160_ovaries_total
 SRR060680
 9xArg_testes_total
 V116
male body		 GSM1528803
follicle cells		 SRR060673
9_ovaries_total
 SRR060672
9x160_females_carcasses_total
 M047
female body
 SRR060679
140x9_testes_total
...............................GTGAGCCGGAACCGGCATTCGT...................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAGTGTGCGAAGAGTGCGCA....................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TTTCGCGTGAGCCGGAACCGG............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............CCCATTGGCATTTCGCGTGAGCC..................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTATGACATTATGACACTTGT..................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............ACCCATTGGCATTTCGCGTGAGCCGGA.................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CTTGTTCGTTTTGCTTCTGCC..................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................TGGCATTTCGCGTGAGCCG.................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAACATTTTTGGGCAAAGGCG..................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................TTTGCTTCTGTCTGCAGTCTGT........................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TGCGCGTGCTTGCGTGTGTGT....................................................................................................................... 21 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TGCGCGTGCTTGCGTGTGTGTG...................................................................................................................... 22 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................GTGTGTGTGTGTGTGTGTGTGT......................................................................................................... 22 0 20 0.20 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0
...............................................................................................................TGCGCGTGCTTGCGTGTGTGTC...................................................................................................................... 22 2 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................GCGTGTGTGTGTGTGTGTGTG............................................................................................................ 21 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
................................................ATGTAAGTGCATTGGAGGTA....................................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TGCGCGTGCTTGCGTGTGTC........................................................................................................................ 20 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................TGCGCGTGCTTGCGTGTCTG........................................................................................................................ 20 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................TGCGCGTGCTTGCGTGTTT......................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................................GACGATCGCGTTTTGTTGT............ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................TGAATGAGTGAGTACGGAG..................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GCAGGCGCGGAGTGTGGGTAACCGTAAAGCGCACTCGGCCTTGGCCGTAACATTCACGTAACCCCAATACTGTAATACTGTGAACAAGCAAAACGAAGACGGAAGTCGGACACGCGCACGCACGCACACACACACACACACACACACACTTACTCACTCACGTGTCTTCGATCGATTTCACACGCTTCTCACGCGTTTTGTTAGACAATATTGTAAAAACCCGCTTTCGCAAAACAACAGCACACACACAC
*******************************************************..............(((((.(((((..(((((..((....(((((((((((.(((...(((........................))).))).))))))))..))).))..))))).))))))))))....***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060658
140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060668
160x9_males_carcasses_total
 M028
head
 SRR060671
9x160_males_carcasses_total
...........................................................................................................................................................................................CTCAGGCATTTTGTGAGACAAT.......................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................TGGCCGTAACGTTCACGTAAC............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......GCGGAGTGTGGGTAACCG................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTCGGACACGCGCACGCACGCA............................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................ATACTGTAATACTGTGAACAA.................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................TTCATACTGTGAACAAGCAA................................................................................................................................................................ 20 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0
........CGAGTGTGGGTAACCATGAA............................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................CGAAGACGGGCGTCGGACAGG......................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0
........................................TTGGCCGTGACAGTCCCGTA............................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................CACACACACACACAAACACTTACT................................................................................................. 24 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCGTCTTTCCCAAAACAACA............ 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................................GCGCAGGCACGCTCACACACA..................................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...................................................................................................................GCACGCACGCACACACACAC.................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:4228201-4228451 - dvi_8861 CGT------CCGCGCCTCA-CA-CC--------CATTGGCATTTCGCGTGAGCCGGA-ACCGGCATTGTAAGTGC----------------------------------------------AT----------------------------------------------------------------------------------------------TG-GGGTTATGA-CATT------ATGACAC-TTGTTCGTTTTGCTTCT-GCCTTCAGCCT--GTGCGCGTG--C--GTGCGTGTGTGTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGAATGAGTGAGTGCAC--------A--------------GAAGCTAGCTAAAGTGTGCGAAGAG--TGCGCAAAACAATC-----------------TGTTATAACAT----TTTT-----------GGGCGAAAG--------------------CGTTTTGTTGTCGTGTGTGTGTG-
droMoj3 scaffold_6328:398158-398379 + dmo_458 CGT------CCGCGTCTCC-CA-CC--------CATTGGCATTCCGCGTGAGCCGGA-ACCGGCATTGTAAGTGC----------------------------------------------AT----------------------------------------------------------------------------------------------TGGGGGTTATGA-CATT------ATGACAC-TTGTTCGTTTTGCT--------TTTGCCT--ATGCTTCTG--C--GTATCTCTGTATGTGTGTGTGTGTGTGCA-------------------------------GAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAATGTGTGCGAAGAG--TGCGCAAGACAATCTATGTTT----TTTT-----------------TTTT--------------------------------------GGCATTTTGTTTTCATGTGTGTGAG-
droGri2 scaffold_14853:949784-950040 - CGT------CCGCGCCTCC-CA-CC--------CATTGGCATTCCGCGTGAACCGGA-ACCGGCATTGTAAGTGC----------------------------------------------AT------------------------------TT---------TATATATATATATATGTATATA-TATATTTTTTTTTTGGTTAAGCGAGCAGAAAATGGGTTATGA-TATTATGATTATGACAC-TTGTTCGTT------------------------GCGCATA--C--ACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACACACACATA-----------------------------------------------------------CACGACACCAAT-------------TGCATGTTATAAAAT----T--T-----------GGGCAAAAGCGATACTTTTTTATTTGTATG-TCTTTTTTCCATGTGTGTGTG-
droWil2 scf2_1100000004963:886176-886323 + TTT------TCGCTCTGTA-T---T--------CAA---------------------------------------------------------------------------------------------------------------------TG---------TGTGTGTGTGTGTGTGTGTGTG-TGTGTCTGTGCGTGT--------------------------------G--------------CGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------GTGTGTGTGTGTGTCTGTGC---------------------------------------------------------------GTGTGCGTGTGT---------------------------------------------------------------------------------------------------------GTGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTG-
dp5 XL_group1a:1556862-1557033 - CGT------CCATGCCACAACA-TT--------CAC-AGAAGTCTGCTGGCAAGAGAGACCCCACTAAAAAGTGTTTGGAATT-----------------------------------------------------------------------------------------------------------------------------------------------TGA-ATTT------TCATTTC-TTGTATTTTTCA-----------------GT-----------------------------------------------------------------------------------------------------------------------------------ACTTCT--------TTGC----------ATCTGTGTTTGTTTCTGTGT---------------------------------------------------------------GTGTGTGTCTGT---------------------------------------------------------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTG-
droPer2 scaffold_13:351498-351644 - TGC------GTTTGCAT---AA-CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAC--ATGCCTGTG--T--GTAT------GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGAGTGCGTG--------------------------CTAGC---CCGAAACGTGCGAAGAA--ATAACAACAAAATGCATTAGCATTGGATT-----------------AATT--------------------------------------ATAATTTTTTTGTTTTTTGTGTTTG-
droAna3 scaffold_12929:1259023-1259185 + CAC------ACACATAG--AC-ATT--------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--CAAACAAGGCAAGTGAGCCACTTAATTTCGAAATTGAAATGTACGTTTGTCCTTGCCATCCGCTT---TGTCCTCTTTGTGTCTGTCTG--TCAGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGAGTGTATTAGTGC
droBip1 scf7180000396360:901660-901738 + TTT------TCCAGCTTCC-TG-CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTCTGCCC--ATCCATGTG--A--GTGTGTGTGTGTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTGTGTGTG-
droKik1 scf7180000302610:771802-771895 + ACA------TCCTGCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTCCTTTTATTCCTCTTTC--TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATATGCAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453927:1147848-1148022 + CGT------TGCCAC------------------------------------------------------------------------------------ACGGACACGTGGTTAGAGCCATGTTTGTTTTAATCCATGCTTTGTTTCGCCTCGCAACCCTCTCATGT----------------------------------------------------------------------------------------------------------------GTGT----------GTGTGTGT--GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGTGTG------------GGGTGCTTAAGTGC---------------------------------------------------------------------------------------------------------GTGTGTGAGTGAATGAGTGTTCGTGTGTTTGTGTG-
droEle1 scf7180000490751:523265-523395 - CCT------TCTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGTGT------GTGTGTGT--GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGGGTGAAT--------G--------------GGTGT--------GTGTGCGAAGGCATTTGGCAGAACAGAT-----------------TGTTGAAGATTTGATT--T-----------CGGGCAGAG--------------------AGC----------------TTTG-
droRho1 scf7180000779588:29982-30104 + TGT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTGCGTGTGGGTGTGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTG--CGTGTGCGTGAGGGTGAGTGAAATTAGTTTA-GGGCAACGAGGCGC------------------------------------------ATTT--------TT-----------------GA-------------------------GAT--TCATAAACTTGCGTGCGTGTCGTTGTGTGTGCGAG-
droBia1 scf7180000301141:1062-1202 + TTT------CCCACAGC--------------------------------------------------------------------------------------------------------------------------------------------CC-----TGTGTGTGTGTGTGTGTGTGTG-TGTGTGTGTGTGTGT--------------------------------G--------------TGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GTGTGT--------GTGT----------GTGTGTGTGTGTGTGTGTGT---------------------------------------------------------------GTGTGTGTGTGT---------------------------------------------------------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGTG-
droTak1 scf7180000415381:115364-115509 - TCAGTATGTGTGTGTGT----------------G----------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTG-TGTGTGTGTGTGTGT--------------------------------G--------------TGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GTGTGT--------GTGT----------GTGTGTGTGTGTGTGTGTGT---------------------------------------------------------------GTGTGTGTGTGT---------------------------------------------------------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-
droEug1 scf7180000409110:388505-388664 - CAG------TCGCATCA--AT-ATTTTTACTGCCCC----------------------------------------AGGACTCTCTCGCCATATATATGTA---------------TATAAATTTCAATTAATC-------------------------------------------------------------------------------------------------------------------------------------CTTAAAGTCT--ATGTGTGT------GTGTGTGT--TTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGAGTGTGC--------G--------------GGTGT----------------------------------------------------------------------------------------------------------------------TTGAGTGTGAGGGTGTGC
dm3 chrX:3905739-3905902 + CGT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGCGTGTGCTGTAAATCCTTTTTTACTCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTAAAAAATATGAGTAG--CACACACACAAAATTAAAAAT----CCTA-----------------AATCAAATTTCTGTACAGCACAAG--------------------GGTTAAGGGGGTGTGCGTGTGTG-
droSim2 x:14880012-14880160 + GGC------TCT-GCTTCT-AG-CC--------C---------------------------------------------------------------------------------------------------------------------CACAATTC-----TGGGCGTGTGTGCGTGTGTGGGATGCAC-------------------------TT-GTGTAGGTGATATA------GTGCTGT-TTTCTGGGTTTTGATCG-GGTTGTATTCT--GCGCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------GCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-
droSec2 scaffold_4:430143-430305 - AAA------GTTCAACTTA-CC-GT--------GCT----------------------------------------AGGAATTTGACAAAAAAAAAGTATC---------------GTTACATTTAGTTTACTTTATGG---------------------------------------------------------------------------------------------------------TAT-TAATTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGG--------TTGTGGCTCTCTCT--GTCTCTCTG--TCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--GTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTGAATGC
droYak3 2L:9958469-9958701 - CCG------GCCCCCAA---AT-CC--------CTTTCGCACTTGGGA---------------------------------------------------------ATTTGGTTGGGGA---------------------------------------------------A------AGCGTGATGGCTTGAT-------------------------TT-AAATTAAAA-ATTT------ATTGCATATTTTTTTGCTCCACCCATCATTGCATAT----TGCCCCTGCGTGTGTGTGTGT--GTG--TGTGAGTGAGTGTG-------------------------------GGCCCAG--------------------------------------------------GAAAAA--------ATGT----------GCAAGTTTGTATTTAAAAAT---------------------------------------------------------------ATATAAATATAT---------------------------------------------------------------------------------------------------------ATATATGTGTAGGTATACGTACTCGTTCGTGTGTG-
droEre2 scaffold_4690:2716894-2717036 + AGT------GTGCGCATCA-T---T--------CGA----------------------------------------CGGAATTTGTCACGATTAC-CAAAC---------------GCGATATTCACTTCACTTCAGGCC--GCTTCGTCCGTCGACCC---------------------------------------------------------------------------------------------------------------TTTGAGT--GTGTGTGT----------------GGG--TGTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------------------------------------------------------------------------------------------GGGTGTGCGTGGGTGTGTGTGGGTGTGCGTGGGTG-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGT------CCGCGCCTCA-CA-CC--------CATTGGCATTTCGCGTGAGCCGGA-ACCGGCATTGTAAGTGC----------------------------------------------AT----------------------------------------------------------------------------------------------TG-GGGTTATGA-CATT------ATGACAC-TTGTTCGTTTTGCTTCT-GCCTTCAGCCT--GTGCGCGTG--C--GTGCGTGTGTGTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGAATGAGTGAGTGCAC--------A--------------GAAGCTAGCTAAAGTGTGCGAAGAG--TGCGCAAAACAATC-----------------TGTTATAACAT----TTTT-----------GGGCGAAAG--------------------CGTTTTGTTGTCGTGTGTGTGTG-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................GTGAGCCGGA-ACCGGCATTCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCGAAGAG--TGCGCA............................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
.........................................TTTCGCGTGAGCCGGA-ACCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
.......................CC--------CATTGGCATTTCGCGTGAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................TTATGA-CATT------ATGACAC-TTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.....................A-CC--------CATTGGCATTTCGCGTGAGCCGGA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................C-TTGTTCGTTTTGCTTCT-GCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
....................................TGGCATTTCGCGTGAGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGT......................................................................................................................................................................................22200.204000000000000000000000000000000000000000000000000000000000004000
.......................................................................................................................................................................................................................................................................................................GCGTGTGTGTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG.........................................................................................................................................................................................21200.102000000000000000000000000000000000000000000000000000000000000002
droMoj3
CGT------CCGCGTCTCC-CA-CC--------CATTGGCATTCCGCGTGAGCCGGA-ACCGGCATTGTAAGTGC----------------------------------------------AT----------------------------------------------------------------------------------------------TGGGGGTTATGA-CATT------ATGACAC-TTGTTCGTTTTGCT--------TTTGCCT--ATGCTTCTG--C--GTATCTCTGTATGTGTGTGTGTGTGTGCA-------------------------------GAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAATGTGTGCGAAGAG--TGCGCAAGACAATCTATGTTT----TTTT-----------------TTTT--------------------------------------GGCATTTTGTTTTCATGTGTGTGAG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................TTCCGCGTGAGCCGGA-ACCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................CTTCTG--C--GTATCTCTGTATGTG..............................................................................................................................................................................................................................................................................................................................................................................2211.001100000
................................................................ATTGTAAGTGC----------------------------------------------AT----------------------------------------------------------------------------------------------TGGGGGTTATGA-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droGri2
CGT------CCGCGCCTCC-CA-CC--------CATTGGCATTCCGCGTGAACCGGA-ACCGGCATTGTAAGTGC----------------------------------------------AT------------------------------TT---------TATATATATATATATGTATATA-TATATTTTTTTTTTGGTTAAGCGAGCAGAAAATGGGTTATGA-TATTATGATTATGACAC-TTGTTCGTT------------------------GCGCATA--C--ACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACACACACATA-----------------------------------------------------------CACGACACCAAT-------------TGCATGTTATAAAAT----T--T-----------GGGCAAAAGCGATACTTTTTTATTTGTATG-TCTTTTTTCCATGTGTGTGTG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTT------TCGCTCTGTA-T---T--------CAA---------------------------------------------------------------------------------------------------------------------TG---------TGTGTGTGTGTGTGTGTGTGTG-TGTGTCTGTGCGTGT--------------------------------G--------------CGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------GTGTGTGTGTGTGTCTGTGC---------------------------------------------------------------GTGTGCGTGTGT---------------------------------------------------------------------------------------------------------GTGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTG-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................GT-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------GTGTGT......................................................................................................................................................................................................................................18200.15303000
...........................................................................................................................................................................................................................................................TGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------GTG.........................................................................................................................................................................................................................................24200.10200002
......................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------GTGTGTGTGTGTGTC.............................................................................................................................................................................................................................26140.07100001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT---------------------------------------------------------------------------------------------------------GTGTGTGCGTGTGCGTGTGTG...............25150.07100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC---------------------------------------------------------------GTGTGCGTGTGT---------------------------------------------------------------------------------------------------------GTGTGT..............................22200.05100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGTGCGTGTGTGTGTGT..........22200.05100100
........................T--------CAA---------------------------------------------------------------------------------------------------------------------TG---------TGTGTGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
..................................................................................................................................................................................................GTGCGTGT--------------------------------G--------------CGTGTGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGTGTGTGTGTGTG.........21200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC---------------------------------------------------------------GTGTGCGTGTGT---------------------------------------------------------------------------------------------------------GTG.................................19200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT---------------------------------------------------------------------------------------------------------GTGTGTGCGTGTGCGTGTGT................24200.05100001
...............................................................................................................................................................................................................................................................TGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------G...........................................................................................................................................................................................................................................18200.05101000
..................................................................................................................................................................................................................................................................GT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GCGTGT--------GTGT----------GTGTGTGTG...................................................................................................................................................................................................................................23200.05100001
..................................................................................................................................................................................................GTGCGTGT--------------------------------G--------------CGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................22200.05100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGTGTGTGTGTGTGT........20200.05101000
dp5
CGT------CCATGCCACAACA-TT--------CAC-AGAAGTCTGCTGGCAAGAGAGACCCCACTAAAAAGTGTTTGGAATT-----------------------------------------------------------------------------------------------------------------------------------------------TGA-ATTT------TCATTTC-TTGTATTTTTCA-----------------GT-----------------------------------------------------------------------------------------------------------------------------------ACTTCT--------TTGC----------ATCTGTGTTTGTTTCTGTGT---------------------------------------------------------------GTGTGTGTCTGT---------------------------------------------------------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGAGTGTGTGT....18200.0510100000000
droPer2
TGC------GTTTGCAT---AA-CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAC--ATGCCTGTG--T--GTAT------GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGAGTGCGTG--------------------------CTAGC---CCGAAACGTGCGAAGAA--ATAACAACAAAATGCATTAGCATTGGATT-----------------AATT--------------------------------------ATAATTTTTTTGTTTTTTGTGTTTG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................GTAT------GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGT..................................................................................................................................................................................24200.051000001
droAna3
CAC------ACACATAG--AC-ATT--------CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--CAAACAAGGCAAGTGAGCCACTTAATTTCGAAATTGAAATGTACGTTTGTCCTTGCCATCCGCTT---TGTCCTCTTTGTGTCTGTCTG--TCAGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGAGTGTATTAGTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGTGCG...........................................................................................................................................................................................25200.255000005
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTGC............................................................................................................................................................................................25200.102000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.................24140.071000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGCG...........................................................................................................................................................................................20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTGTGTGTGTGTGTGT......................................................................................................................................................................................................19200.051100000
droBip1
TTT------TCCAGCTTCC-TG-CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTCTGCCC--ATCCATGTG--A--GTGTGTGTGTGTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTGTGTGTG-SizeHit CountTotal NormTotal
No Reads
droKik1
ACA------TCCTGCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTCCTTTTATTCCTCTTTC--TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATATGCAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGT------TGCCAC------------------------------------------------------------------------------------ACGGACACGTGGTTAGAGCCATGTTTGTTTTAATCCATGCTTTGTTTCGCCTCGCAACCCTCTCATGT----------------------------------------------------------------------------------------------------------------GTGT----------GTGTGTGT--GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGTGTG------------GGGTGCTTAAGTGC---------------------------------------------------------------------------------------------------------GTGTGTGAGTGAATGAGTGTTCGTGTGTTTGTGTG-SizeHit CountTotal NormTotal
No Reads
droEle1
CCT------TCTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGTGT------GTGTGTGT--GTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGGGTGAAT--------G--------------GGTGT--------GTGTGCGAAGGCATTTGGCAGAACAGAT-----------------TGTTGAAGATTTGATT--T-----------CGGGCAGAG--------------------AGC----------------TTTG-SizeHit CountTotal NormTotal
No Reads
droRho1
TGT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTGCGTGTGGGTGTGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTG--CGTGTGCGTGAGGGTGAGTGAAATTAGTTTA-GGGCAACGAGGCGC------------------------------------------ATTT--------TT-----------------GA-------------------------GAT--TCATAAACTTGCGTGCGTGTCGTTGTGTGTGCGAG-SizeHit CountTotal NormTotal
No Reads
droBia1
TTT------CCCACAGC--------------------------------------------------------------------------------------------------------------------------------------------CC-----TGTGTGTGTGTGTGTGTGTGTG-TGTGTGTGTGTGTGT--------------------------------G--------------TGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GTGTGT--------GTGT----------GTGTGTGTGTGTGTGTGTGT---------------------------------------------------------------GTGTGTGTGTGT---------------------------------------------------------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGTG-SizeHit CountTotal NormTotal
No Reads
droTak1
TCAGTATGTGTGTGTGT----------------G----------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTG-TGTGTGTGTGTGTGT--------------------------------G--------------TGTGTGTGTGT-----------------GT-----------------------------------------------------------------------------------------------------------------------------------GTGTGT--------GTGT----------GTGTGTGTGTGTGTGTGTGT---------------------------------------------------------------GTGTGTGTGTGT---------------------------------------------------------------------------------------------------------GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-SizeHit CountTotal NormTotal
No Reads
droEug1
CAG------TCGCATCA--AT-ATTTTTACTGCCCC----------------------------------------AGGACTCTCTCGCCATATATATGTA---------------TATAAATTTCAATTAATC-------------------------------------------------------------------------------------------------------------------------------------CTTAAAGTCT--ATGTGTGT------GTGTGTGT--TTGTGTGTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGAGTGTGC--------G--------------GGTGT----------------------------------------------------------------------------------------------------------------------TTGAGTGTGAGGGTGTGCSizeHit CountTotal NormTotal
No Reads
dm3
CGT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGCGTGTGCTGTAAATCCTTTTTTACTCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTAAAAAATATGAGTAG--CACACACACAAAATTAAAAAT----CCTA-----------------AATCAAATTTCTGTACAGCACAAG--------------------GGTTAAGGGGGTGTGCGTGTGTG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------GGTTAAGGGGGTGTGCGTGTGTG-2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTAG--CACACACACAAAAT....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAGCACAAG--------------------GGTTAAGGGGG.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................20200.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000030100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTATTTGCG........................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................2280.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTA..............................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000100000000000
...........................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTG....................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000
CGT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................................2380.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGT.....................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..T------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..........TGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGTG............................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTATT............................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000
..T------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTA..............................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGT.....................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGTGT.................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTG......................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.GT------GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
....................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTATT............................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGTGTA..............................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTGTGTAT.............................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTG........................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..........TGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTGTGTG..........................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ATGTGTGTGTGTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTGTGT.................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTATTTG..........................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........GTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ATGTGTGTGTGTGTGTGTGTGTGTG....................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
droSim2
GGC------TCT-GCTTCT-AG-CC--------C---------------------------------------------------------------------------------------------------------------------CACAATTC-----TGGGCGTGTGTGCGTGTGTGGGATGCAC-------------------------TT-GTGTAGGTGATATA------GTGCTGT-TTTCTGGGTTTTGATCG-GGTTGTATTCT--GCGCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------GCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................GCGCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------GCGTGTGG............................1822.00400000000310000000
...........................................................................................................................................................................................TGCAC-------------------------TT-GTGTAGGTGATATA------GTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
........................................................................................................................................................................................................................................................................................CGCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------GCGTGTGGT...........................1860.17100000000100000000
.........................................................................................................................................................................................................................................................................................GCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------GCGTGTGG............................1690.11100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGT......21200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTGT......19200.05100000000000100000
droSec2
AAA------GTTCAACTTA-CC-GT--------GCT----------------------------------------AGGAATTTGACAAAAAAAAAGTATC---------------GTTACATTTAGTTTACTTTATGG---------------------------------------------------------------------------------------------------------TAT-TAATTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGG--------TTGTGGCTCTCTCT--GTCTCTCTG--TCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--GTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTGAATGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGTGTGTGTGTGTGTGTGTGTG.....................................................................................................................................................................................................2660.1710001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................................................26200.1530201
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGTGT..............................................................................................................................................................................................24200.1020200
droYak3
CCG------GCCCCCAA---AT-CC--------CTTTCGCACTTGGGA---------------------------------------------------------ATTTGGTTGGGGA---------------------------------------------------A------AGCGTGATGGCTTGAT-------------------------TT-AAATTAAAA-ATTT------ATTGCATATTTTTTTGCTCCACCCATCATTGCATAT----TGCCCCTGCGTGTGTGTGTGT--GTG--TGTGAGTGAGTGTG-------------------------------GGCCCAG--------------------------------------------------GAAAAA--------ATGT----------GCAAGTTTGTATTTAAAAAT---------------------------------------------------------------ATATAAATATAT---------------------------------------------------------------------------------------------------------ATATATGTGTAGGTATACGTACTCGTTCGTGTGTG-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................GTTGGGGA---------------------------------------------------A------AGCGTGATGGCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
AGT------GTGCGCATCA-T---T--------CGA----------------------------------------CGGAATTTGTCACGATTAC-CAAAC---------------GCGATATTCACTTCACTTCAGGCC--GCTTCGTCCGTCGACCC---------------------------------------------------------------------------------------------------------------TTTGAGT--GTGTGTGT----------------GGG--TGTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------------------------------------------------------------------------------------------GGGTGTGCGTGGGTGTGTGTGGGTGTGCGTGGGTG-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 04:10 AM